mRNA_Ecto-sp13_S_contig9409.21003.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: D7G395_ECTSI (Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G395_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.280e-52 Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 1
Query: 1 VVQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQLSDVSVGD 297
VVQIELS EERRRLLLFITGTDRLPEAGCETLSIEIPFE+PGGSKDIET+RLAATKSLGQVPTAHTCDN+LELPNYWMLLMRHEGRDEKTQLSDVSVGD
Sbjct: 2360 VVQIELSPEERRRLLLFITGTDRLPEAGCETLSIEIPFEVPGGSKDIETARLAATKSLGQVPTAHTCDNILELPNYWMLLMRHEGRDEKTQLSDVSVGD 2458
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A835ZDJ6_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.180e-17 Identity = 56/125 (44.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 25 EERRRLLLFITGTDRLPEAGCETLSIEI---PFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQL--SDVSVGDRERLESRLREILAGRLRVALNNATGYALD 384
+E+ LLLFITG RLP E ++IE+ P E GS ++ AA LG+VP AHTCDNVLE+P+YW L+ G D K L S +GD L +LR+ L +L +A+ NA GY LD
Sbjct: 64 QEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALVTEAGFDPKRGLPASAKLMGD---LRQKLRKHLRDKLLLAIANAQGYGLD 185
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A061SDF5_9CHLO (Ubiquitin-protein ligase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SDF5_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 2.960e-16 Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 19 SQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQLSDVSVGDRERLESRLREILAGRLRVALNNATGYALDD 387
S E +RR +LF+TG++RLP G E L +E+PF + S + LG +P AHTC+N+LELPNYW L+R E E S +S R +L L +IL RLR+A+ N Y LD+
Sbjct: 187 SPELKRRFVLFVTGSERLPLPGTELLRVELPF--------VAFSLRDHHRMLGMLPQAHTCENILELPNYWEALLRTE-HPEAEDASALSESQRAKLFQSLHKILDERLRLAIMNCDSYGLDE 300
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A7S3ZUA9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA9_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.760e-16 Identity = 76/239 (31.80%), Postives = 114/239 (47.70%), Query Frame = 1
Query: 16 LSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQLSDVSVGDRE--RLESRLREILAGRLRVALNNATGYALDDLDDESDADNTRNSLLTAEGSADIGVEIPEGTLDAGRD-----DGRVTVDSDEEVFPEIPSLDDDRNEEQGVTTAGRGSTSTPSKRTASAVDTAGSDDDEDFVSFLDREKKARN 711
L+ +RR+LL+F+TG RLP E L++E+PF +P G ++ R + L VP +HTCDN+LELPNYW L++ + + + G RE LE LR I+ +L VAL+NA GY LD L+ ++L A + A RD D + DEE P +P L +D ++ + +T+ PS ++ D+D LD K+ N
Sbjct: 1531 LTPAQRRKLLVFVTGVSRLPARHAEFLTVELPF-LPFG---VDEQR----RMLAMVPQSHTCDNILELPNYWEALLKTKTDEARPPRR----GSRECNALERELRRIVREKLLVALDNAVGYGLDALEPH-----VTHALACAAAXXXXXXXXXXASSRAMRDARASDDAQYDPFDDEESIPSLPELKEDDDDPIPMLQEATAATTRPSLQS-----------DDDIPDLLDAPKQEDN 1741
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: D8UCH3_VOLCA (HECT domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCH3_VOLCA) HSP 1 Score: 87.8 bits (216), Expect = 8.000e-15 Identity = 60/148 (40.54%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 4 VQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEG-RDEKTQL----SDVSVGDRERLESRLREILAGRLRVALNNATGYALD------DLDDESDADN 414
V E S E R R + F+TGT RLP G E L I+ PF G ++ T LG +P AHTCDN+LELPNYW L+ G R + S ++ G E L +R IL RL +A+ N GY LD D DD++ A N
Sbjct: 624 VLAEWSPERRLRFVEFVTGTSRLPLPGSELLKIQAPFVAMGAAEHKAT--------LGMLPQAHTCDNLLELPNYWESLLAVRGVRGGPAAVARGTSQLTEGQVEELRGEVRRILENRLEMAVLNFQGYGLDERSGGRDDDDDNGAGN 763
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A7S3Y0V5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0V5_HETAK) HSP 1 Score: 82.8 bits (203), Expect = 1.730e-14 Identity = 55/154 (35.71%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 4 VQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQLSDVSVGDRERLESRLREILAGRLRVALNNATGYALDDLDDESDADNTRNSLLTAEGSADIGVE 465
V LS E +R+LL+F+TG LP E L+IE PF +P D + K LG +P +HTCDN+LELP+Y L EGR RLRE+L G+L +A+ N+ GY LD++ ++ LL++ A G +
Sbjct: 91 VAAALSPELKRQLLVFVTGVSTLPAPFTEFLTIEQPF-VPLHKDDYK-------KILGMLPQSHTCDNILELPDYAGALRALEGRPPSP--------------GRLRELLRGKLLLAVQNSEGYGLDEVTSSGGGEDALRGLLSSRRGARRGAD 222
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A8K1C6F0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6F0_PYTOL) HSP 1 Score: 86.7 bits (213), Expect = 2.270e-14 Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 31 RRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEGRDEKTQLSDVSVGDRERLESRLREILAGRLRVALNNATGYALD 384
+R+L+ FITG + LP+AG E L IE+PF + G+ I+T L +P +HTCDN LELPNYW L + DE TQ LE L E+LA +LR A + GY LD
Sbjct: 1506 KRKLVKFITGVETLPQAGSEFLRIEMPFAVVTGADHIKT--------LQMLPQSHTCDNTLELPNYWHALCWRDKHDE-TQSHPG-------LEKELEELLANKLRAAAEYSEGYGLD 1607
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A8J4C3Q5_9CHLO (HECT domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C3Q5_9CHLO) HSP 1 Score: 85.9 bits (211), Expect = 3.350e-14 Identity = 57/136 (41.91%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 4 VQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEG-RDEKT-------QLSDVSVGDRERLESRLREILAGRLRVALNNATGYALDD 387
V E E R R + F+TGT RLP G E L I+ PF G ++ T LG +P AHTCDN+LELPNYW L+ G R T QL++ + D L + R ILA RL VA+ N GY LD+
Sbjct: 622 VMAEWPPERRLRFVEFVTGTSRLPLPGSELLKIQAPFVAMGVAEHRAT--------LGMLPQAHTCDNLLELPNYWESLLAVRGVRGGPTAVARGTAQLTEEQLAD---LRAETRRILADRLEVAVLNFQGYGLDE 746
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A150GTT8_GONPE (HECT domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTT8_GONPE) HSP 1 Score: 85.5 bits (210), Expect = 4.020e-14 Identity = 54/134 (40.30%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 25 EERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEG-RDEKTQLS----DVSVGDRERLESRLREILAGRLRVALNNATGYALDDLDDESDAD 411
E R R + F+TGT RLP G E L I+ PF G S+ T LG +P AHTCDN+LELPNYW L+ G R ++ V+ G L + R IL RL +A++N GY LD+ D D
Sbjct: 447 ERRLRFVEFVTGTSRLPLPGSELLKIQAPFVAMGASEHKAT--------LGMLPQAHTCDNLLELPNYWESLLAVRGVRGGPAAIARGTTTVTDGQLAELRAEARRILDDRLEIAVSNFQGYGLDERSGPDDDD 572
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Match: A0A8J4F060_9CHLO (HECT domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F060_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 7.920e-14 Identity = 57/136 (41.91%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 4 VQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSRLAATKSLGQVPTAHTCDNVLELPNYWMLLMRHEG-RDEKT-------QLSDVSVGDRERLESRLREILAGRLRVALNNATGYALDD 387
V E E R R + F+TGT RLP G E L I+ PF G ++ T LG +P AHTCDN+LELPNYW L+ G R T QL++ + D L + R ILA RL VA+ N GY LD+
Sbjct: 621 VMAEWPPERRLRFVEFVTGTPRLPLPGSELLKIQAPFVAMGVAEHRAT--------LGMLPQAHTCDNLLELPNYWESLLAVRGVRGGPTAVARGTAQLTEEQMTD---LRAETRRILADRLEVAVLNFQGYGLDE 745 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9409.21003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9409.21003.1 >prot_Ecto-sp13_S_contig9409.21003.1 ID=prot_Ecto-sp13_S_contig9409.21003.1|Name=mRNA_Ecto-sp13_S_contig9409.21003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp VVQIELSQEERRRLLLFITGTDRLPEAGCETLSIEIPFEIPGGSKDIETSback to top mRNA from alignment at Ecto-sp13_S_contig9409:162..5853- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9409.21003.1 ID=mRNA_Ecto-sp13_S_contig9409.21003.1|Name=mRNA_Ecto-sp13_S_contig9409.21003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5692bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9409:162..5853- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9409:162..5853- >mRNA_Ecto-sp13_S_contig9409.21003.1 ID=mRNA_Ecto-sp13_S_contig9409.21003.1|Name=mRNA_Ecto-sp13_S_contig9409.21003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1086bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9409:162..5853- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |