mRNA_Ecto-sp13_S_contig9406.21002.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9406.21002.1
Unique NamemRNA_Ecto-sp13_S_contig9406.21002.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: D7G0Y3_ECTSI (Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y3_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 1.290e-138
Identity = 207/210 (98.57%), Postives = 208/210 (99.05%), Query Frame = 2 
Query:   80 RNILQAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            RNILQAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFT VDGGHRAIVFNRLSGVKEGVM EGMHFIIPWFEWPYIYDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQ+RAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK
Sbjct:   49 RNILQAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFT-VDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 257
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A6H5KHW4_9PHAE (Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW4_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 1.910e-131
Identity = 200/215 (93.02%), Postives = 204/215 (94.88%), Query Frame = 2 
Query:   92 QAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            +AAFNKIP+ GPLLPLINGALVLGA+GYCGYNSVFT VDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD         SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSER+KYVVEKARQEK
Sbjct:    6 KAAFNKIPSGGPLLPLINGALVLGALGYCGYNSVFT-VDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERSKYVVEKARQEK 219
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A6T5MRB1_HETAK (Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MRB1_HETAK)

HSP 1 Score: 270 bits (689), Expect = 2.160e-87
Identity = 144/215 (66.98%), Postives = 171/215 (79.53%), Query Frame = 2 
Query:   95 AAFNKIPN-SGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            AA   +P+  GPL  L+  AL +G +GY GYNS +T V+GGHRA+ FNRL+G+ E V  EGMHF++PW E P +YD         SLTGSKDLQMV+ITLRVL+KP+P  LP IYRRLG DYDERVLPSIVNEVTK+VVA+YNASELLTKREAVS+ +   L  RA DFGI+++D +ITHLSFSREYT AVEAKQVAQQD+ERAKYVV+KA+QEK
Sbjct:    7 AARKMMPSPGGPLFGLLKTALGIGVMGYAGYNSFYT-VEGGHRAVKFNRLTGIGEKVYEEGMHFMVPWLERPIVYDVRTRPRNLQSLTGSKDLQMVNITLRVLSKPNPATLPMIYRRLGTDYDERVLPSIVNEVTKSVVARYNASELLTKREAVSREVAQRLMARARDFGILLDDVSITHLSFSREYTNAVEAKQVAQQDAERAKYVVDKAKQEK 220
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A835Z7Y4_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y4_9STRA)

HSP 1 Score: 263 bits (672), Expect = 6.510e-85
Identity = 145/217 (66.82%), Postives = 175/217 (80.65%), Query Frame = 2 
Query:   98 AFNKIPNSG-PLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEG---VMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            AF+K+P  G P+  ++  AL +GA+G  GYNSVFT V+GGHRAIVFNR+SG+K+G     +EGMHF+IP  EWP I+D         +LTGSKDLQMV++TLRVL KP+  +LPFIYRRL ++YD+RVLPSI+NEV KAVVAKYNASELLTKRE VSK+IR+AL  RA DF I ++D AITHL+FSREYTAA+EAKQVAQQD+ERAKYVV KA QEK
Sbjct:    6 AFDKMPQGGGPIGAVLKAALGVGALGVAGYNSVFT-VEGGHRAIVFNRISGIKDGPENTYSEGMHFVIPGMEWPIIFDVRTRPHQLTTLTGSKDLQMVNVTLRVLHKPNLTQLPFIYRRLHQNYDDRVLPSIINEVLKAVVAKYNASELLTKREDVSKSIREALTLRARDFMIELDDVAITHLAFSREYTAAIEAKQVAQQDAERAKYVVMKAVQEK 221
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A7S2XX85_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX85_9STRA)

HSP 1 Score: 261 bits (666), Expect = 5.120e-84
Identity = 142/216 (65.74%), Postives = 168/216 (77.78%), Query Frame = 2 
Query:   92 QAAFNKIP-NSGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            +AA   +P N+GP   ++  AL +G +GY GYNSV T V+GGHRAI F+R  G+      EG+ F+IPW E P IYD         SLTGSKDLQMV++TLRVL+KPDP  L FIYRRLG DYDERVLPSIVNEV+K+VVA+YNASELLTKREAVS+ +   L KRA DFGI+++D +ITHLSFSREYTAAVEAKQVAQQD+ERAKYVV+KA QEK
Sbjct:    8 EAAKKMMPKNTGPFFAIVKAALGIGVLGYAGYNSVHT-VEGGHRAIKFSRFGGIGSMTYGEGLLFVIPWLERPIIYDVRTRPRNLQSLTGSKDLQMVNLTLRVLSKPDPNNLHFIYRRLGIDYDERVLPSIVNEVSKSVVARYNASELLTKREAVSREVASLLTKRARDFGILLDDVSITHLSFSREYTAAVEAKQVAQQDAERAKYVVDKAIQEK 222
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: W7TL69_9STRA (Prohibitin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL69_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.830e-78
Identity = 140/208 (67.31%), Postives = 165/208 (79.33%), Query Frame = 2 
Query:  119 SGPLLPLINGALVLGAVG--YCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            +GPL     GAL LG  G  Y GYNS +T V+GGHRA++FNRL GVKE V  EGMHF+IPWF+ P IYD         SLTGSKD+QMV+IT+RVL+KPD  +L +I+R LG+DYDERVLPSIVNEV+KAVVAKYNA+ELLTKRE VS  IR  L+KRA +F IV++D +ITHL+FSREYT AVEAKQVAQQ++ERAKYVV KA QEK
Sbjct:   40 AGPL-----GAL-LGVTGILYAGYNSFYT-VEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEK 240
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: F0XYI2_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI2_AURAN)

HSP 1 Score: 243 bits (621), Expect = 6.810e-77
Identity = 135/219 (61.64%), Postives = 165/219 (75.34%), Query Frame = 2 
Query:   80 RNILQAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            R+ L    +++P  GP   L++    + AVG+ GYNSVFT V GG RA++++R+SGVK+ V  EGMH  +P  E+P  +D         SLTGSKDLQMV+ITLRVL+KP+  +L +IY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS  IR  L  RA DF I+++D +ITHLSFS EYTAAVEAKQVAQQDSERA+Y+VEKA QEK
Sbjct:   19 RDKLNELGSQMPQGGPPTGLVSAVAGISAVGFLGYNSVFT-VQGGQRAVLWSRISGVKDAVYAEGMHPRVPLIEYPVPFDVRTRPRNVQSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEK 236
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A7S3NH81_9STRA (Prohibitin n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NH81_9STRA)

HSP 1 Score: 237 bits (604), Expect = 4.100e-74
Identity = 136/220 (61.82%), Postives = 166/220 (75.45%), Query Frame = 2 
Query:   80 RNILQAAFNKIPNSGPLLPLINGALV-LGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            R+ L    +++P  G     I  ALV +G +G+ GYNS FT V GG RA++++R++GVKE V  EGMH  IP  E+P  +D         SLTGSKDLQM++ITLRVL+KP    LPFIY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS+ IR+ L +R+ DF IV+ED +ITHLSFS EYTAAVEAKQVAQQD+ER++Y+VEKA QEK
Sbjct:   20 RDRLNDLGSQMPTGGGGGGNIMSALVGIGGLGFLGYNSFFT-VQGGERAVLWSRIAGVKESVYNEGMHPKIPLIEYPISFDVRTRPRNVQSLTGSKDLQMINITLRVLSKPSIPDLPFIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSQEIRNRLLRRSADFRIVLEDVSITHLSFSSEYTAAVEAKQVAQQDAERSRYIVEKAIQEK 238
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A7S3ZNB9_9STRA (Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNB9_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.670e-73
Identity = 133/200 (66.50%), Postives = 155/200 (77.50%), Query Frame = 2 
Query:  137 LINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            LI     + AVGY GYNSVFT V+GG RA++++R+ GVK  V  EGMH  IP  E+P  +D         SLTGSKDLQMV++TLRVL  P+  +LP+IY  LG DYD+RVLPSIVNEVTKAVVA+YNASELLTKREAVS  IR AL KRA DF IV++D A+THLSFS EYTAAVEAKQVAQQ++ERA+YVVEKA QEK
Sbjct:   46 LIGAVAGVSAVGYVGYNSVFT-VEGGQRAVLWSRVQGVKPAVYGEGMHPRIPLIEYPVHFDVRTRPRNVQSLTGSKDLQMVNVTLRVLFYPNKQELPWIYTMLGHDYDDRVLPSIVNEVTKAVVARYNASELLTKREAVSNEIRYALTKRAADFRIVLDDFALTHLSFSNEYTAAVEAKQVAQQEAERARYVVEKAIQEK 244
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BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Match: A0A7S1U8Z8_9STRA (Prohibitin (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z8_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.920e-73
Identity = 125/206 (60.68%), Postives = 159/206 (77.18%), Query Frame = 2 
Query:  119 SGPLLPLINGALVLGAVGYCGYNSVFTAVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK 709
            +GP   L   A  LGA+GY GYNS+FT V GG RA+++NR+ GV+E V +EGMH I+PWFE   I+D         SLTGSKDLQMV++ LRVL+KPD  KLP +YR LG DY+E+V+PS+VNEV K+VVA+YNASELLT+RE VS+ IR+ L+ R  +F I+++D +IT L F  EYT+AVEAKQVAQQD+ERA+YVVE+ARQEK
Sbjct:   88 AGPAAGLAGVAAGLGAIGYVGYNSLFT-VQGGERAVIYNRVVGVREDVFSEGMHVILPWFERATIFDVRTRPRNLVSLTGSKDLQMVNLNLRVLSKPDVSKLPEVYRFLGPDYNEKVMPSVVNEVAKSVVARYNASELLTRREQVSREIREDLEARLRNFYILLDDVSITDLRFGAEYTSAVEAKQVAQQDAERARYVVERARQEK 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9406.21002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Y3_ECTSI1.290e-13898.57Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KHW4_9PHAE1.910e-13193.02Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6T5MRB1_HETAK2.160e-8766.98Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A835Z7Y4_9STRA6.510e-8566.82Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S2XX85_9STRA5.120e-8465.74Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
W7TL69_9STRA3.830e-7867.31Prohibitin n=3 Tax=Monodopsidaceae TaxID=425072 Re... [more]
F0XYI2_AURAN6.810e-7761.64Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
A0A7S3NH81_9STRA4.100e-7461.82Prohibitin n=1 Tax=Aureoumbra lagunensis TaxID=440... [more]
A0A7S3ZNB9_9STRA2.670e-7366.50Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35... [more]
A0A7S1U8Z8_9STRA2.920e-7360.68Prohibitin (Fragment) n=1 Tax=Phaeomonas parva Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9406contigEcto-sp13_S_contig9406:1254..6351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score289.7
Seed ortholog evalue8e-76
Seed eggNOG ortholog2880.D7G0Y3
Preferred namePHB2
Model size709
KEGG koko:K17081
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000060,GO:0000819,GO:0001101,GO:0001302,GO:0001666,GO:0001763,GO:0001932,GO:0001934,GO:0002009,GO:0002082,GO:0003006,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005773,GO:0005774,GO:0005911,GO:0006140,GO:0006355,GO:0006457,GO:0006606,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007049,GO:0007059,GO:0007062,GO:0007088,GO:0007096,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008285,GO:0008406,GO:0009506,GO:0009507,GO:0009536,GO:0009611,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016363,GO:0017038,GO:0019219,GO:0019220,GO:0019222,GO:0019866,GO:0019867,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022612,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030054,GO:0030154,GO:0030162,GO:0030312,GO:0030331,GO:0030421,GO:0030879,GO:0030964,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031536,GO:0031647,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033218,GO:0033365,GO:0033554,GO:0033599,GO:0033600,GO:0033993,GO:0034220,GO:0034399,GO:0034504,GO:0034613,GO:0035239,GO:0035257,GO:0035258,GO:0035295,GO:0035632,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042695,GO:0042886,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043433,GO:0043467,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0045136,GO:0045137,GO:0045184,GO:0045271,GO:0045787,GO:0045840,GO:0045861,GO:0045892,GO:0045927,GO:0045931,GO:0045934,GO:0045937,GO:0046543,GO:0046907,GO:0047485,GO:0048232,GO:0048308,GO:0048311,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051427,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0055044,GO:0055085,GO:0060255,GO:0060259,GO:0060429,GO:0060443,GO:0060444,GO:0060548,GO:0060562,GO:0060603,GO:0060688,GO:0060744,GO:0060749,GO:0060762,GO:0061138,GO:0061180,GO:0061377,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070372,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070727,GO:0070838,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071453,GO:0071456,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072594,GO:0080090,GO:0090068,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0098813,GO:1900542,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902806,GO:1902808,GO:1903506,GO:1903507,GO:1903578,GO:1903998,GO:1905330,GO:1990204,GO:2000026,GO:2000027,GO:2000112,GO:2000113,GO:2001141
Exons6
EggNOG free text desc.thelarche
EggNOG OGsCOG0330@1,KOG3090@2759
Cds size447
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9406.21002.1prot_Ecto-sp13_S_contig9406.21002.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9406 2473..6351 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464208.2347412-UTR-Ecto-sp13_S_contig9406:1253..14531681464208.2347412-UTR-Ecto-sp13_S_contig9406:1253..1453Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9406 1254..1453 +
1681464208.245947-UTR-Ecto-sp13_S_contig9406:2410..24721681464208.245947-UTR-Ecto-sp13_S_contig9406:2410..2472Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9406 2411..2472 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464208.255392-CDS-Ecto-sp13_S_contig9406:2472..25291681464208.255392-CDS-Ecto-sp13_S_contig9406:2472..2529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9406 2473..2529 +
1681464208.2689316-CDS-Ecto-sp13_S_contig9406:3447..35531681464208.2689316-CDS-Ecto-sp13_S_contig9406:3447..3553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9406 3448..3553 +
1681464208.279905-CDS-Ecto-sp13_S_contig9406:4266..43611681464208.279905-CDS-Ecto-sp13_S_contig9406:4266..4361Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9406 4267..4361 +
1681464208.289704-CDS-Ecto-sp13_S_contig9406:5655..57841681464208.289704-CDS-Ecto-sp13_S_contig9406:5655..5784Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9406 5656..5784 +
1681464208.2995846-CDS-Ecto-sp13_S_contig9406:6291..63511681464208.2995846-CDS-Ecto-sp13_S_contig9406:6291..6351Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9406 6292..6351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9406.21002.1

>prot_Ecto-sp13_S_contig9406.21002.1 ID=prot_Ecto-sp13_S_contig9406.21002.1|Name=mRNA_Ecto-sp13_S_contig9406.21002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
MTEGMHFIIPWFEWPYIYDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYR
RLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRA
GDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEK
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mRNA from alignment at Ecto-sp13_S_contig9406:1254..6351+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9406.21002.1 ID=mRNA_Ecto-sp13_S_contig9406.21002.1|Name=mRNA_Ecto-sp13_S_contig9406.21002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9406:1254..6351+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCATGACACTAATGACTGACGTCACCAGCGAACCCCGCCGCGAAGGATC
AGGCAGCTTATACACATCCTCGTTGTGGACGCAATATTTTGCAGGCCGCG
TTTAACAAGATCCCAAACAGCGGGCCCCTCCTGCCCCTCATCAACGGCGC
GTTGGTGCTTGGAGCGGTGGGCTACTGCGGGTACAACTCGGTATTCACAG
GTGAGGGAGTGTTCCCGCCCTAGCAATGGTGTTGTTACGGTTCGGGCCGT
TTACAGCGGCGGACGAAGCTGCTGGAATCGAACCGTTTTCTTCTCTGCCA
TCACCCCCCCCCCCCAACTTGAACGGAGCTCCTCACGCAGACAATAGGCA
CGCGACCAAGTCTATGTAGAGCTGCTGCATACAGGCATTCCCGTTTCGTC
GGTGTATCCGCTGTGGTGTTGGTGTCGCTGTGATAGATTGTTCGGGGTGT
TGAGGTTTGTTGGTAGTGGCACGGTTGTCCTCGCTTTCAGGACTTCGTCG
TCTGCTCCTCCTCAAGAACAATGTCCTCAACGCGGGGAAGTGTCCTTACA
ATCGTTCACCACCCTTGTTCTATGTTCTGTGGGGCACCTTACATCTTGAC
GCTATGGTGTCCTCGAAAGCTGGGAGTGTCGTTAGGTTTGGGGTCCTGGA
AGTGGGGAAGCCTCTAGTGGAGAACGGCATGGCCAACGGTTGTGTGGTCC
AGTGGTGGGGGGGATAGTGGTGGTGATATCGTTAGCGTGGGGGCCTCGGC
GATGGCCGTTGTTGCGTGGCTTGGCTGCTGTTCGCCACCGTCTCTTGCAG
CCAGCCAATGCCTTGATCGCCCCCACCCACACGCAGTTTCACGGGCGCTG
CTCCTCTTGGTTGCCGTAGTTTCGTTTGAAGGCATTCGGTGCTTTGGTCG
GCCCGCACACAATTTGCCTCGGTCTCAGGGCACTCTCTCGTTTTTCTAAG
TGGCCATGATTGAAGTTCGTTGCCTTGGAGCTAGCGTTGCCAACTGAACC
GTATTCGCATTTCCGAACGATTCCCGCGAACGAAGTACAATGTTTTGGAT
TAACCCCCAACAACAGGAAACACAACTCCTGTATTCCGACCGTGATGTGT
ATGGCACCCGGCGTGTTGTTAATTTGCTAATGCTCCATTCCGGATCGGCG
TCTTGAGCAGTGGATGGCGGGCACCGTGCGATCGTGTTCAACCGGCTGAG
CGGCGTGAAGGAGGGGGTTATGACGGAGGGGATGCACTTCATCATCCCCT
GGTTCGAGTGGCCTTACATCTACGACGTGCGCACGAAGCCGCGTAACGTT
CAGGTGAAGAAAAGGGGGGCGAGGGGGGGAGGGTACTGAAGAAAGGGGCG
GTTGAACCCATGTAAAAGCATGCCGTAGTCATTGGAAAGGGGGGGGATGG
ATTCTGGCCGTAAGAGCGCAAAGAGACAAAAATACCGAGCAAGTGACGAA
CAGGTTTCGTGAGAGCGTGATTACTTTTCTCGAGGCATCTCCCCTCAACC
TTCTTATTCTGTTTTTAGGGTTGGTTCACGGGCCAGCGTCAACTCGAGTC
TGGATAAGATTCGTGCATGGTTGAAATAATCTACAAAGTCGCGAGCGGTC
AGACCCATGGATTCTTCTTGCCCTTGACATCTACATGTGTGGGTTGGGTT
AGTATTTGCTCAATAGGGGGAAAACCATGCCACCATCGCATGGGCTTCGG
TCTCAAAAGAGACGGAGCAAACAGTAGGGGTCCAGTTGAGTTCGATGCTT
GACGTCGGAGTCTGGCAAGACAGTGCTGCGAGATGCAGCGTTGGGAAAAA
CTTGCGGCGACATAGCTCGATTGTTTGTCTGCAGGACGTCGCGCTCTACC
TTCGTCACCAATGTTGACGTGTGAATCGATTGCGGGTTTTTACCACGGCT
GGTCAAGCTGTTCTCGTGTCACATGGCATGCTTGTGGGTTGACGCCAAAT
CCTGCAAATATTGTTCGTCTCGTGTCGCCAACGAATCCCCCCCCCCCCTC
CGATAACATAGGTAGACTACAACAGGAAATTTTTAAGCAACCATTGGCAA
AATATGAAAGAACGGGCGGCCATCGGTGATCTGTCCTGTGGGAACAATGC
CCCGTCCTCTCCAGGACGCGTGGTCAATAATGGTCTAACCACGAAGGCAT
GCAATACATCAGCGTGCGCCCCCCCCCCCCCCGTTTCTTGTCAGTCGCTA
ACTGGGTCCAAGGACTTGCAAATGGTGAGCATCACGCTCCGTGTGCTGAC
CAAGCCTGATCCCTTCAAGCTCCCCTTCATCTACCGCAGGTTGGGCAAGG
GTAAGTGTCGTCCTCGTTATCGTCGTTCCTTGTCTCTCTAGTTGTAGCTG
CCGTAGCGAAGGACTCGCGGCTGAGATGTCAAGGCGACCCGACACTGCCG
GCGGGTGCCCTCTTTGGGTGTGGCAAGCTCTTTACCCCACAGTGTAGCGG
GCACGCGCATTATTTTTTTGGGTTGGGCCATTCTGGTTATTCCATCTGTG
CCACTCATTTGTCACCCGTACTAGTATGGGGCACCCGCACCATCCATTGC
ATTTACCATCCTGGTTATTCGATTTGTTGAAGCCAATGTCACCCCCGGTA
TTATGGCGCACCCGACTGCACTGTTGCTTCGGGCCTACCACTAGTTTGTG
CTTTCTGTACGTGTGCCTGGCTGTGTTGCTTACATGCGTCGCCCATGGCT
GCTGCTGTGCACGGTCCGGGAAACCGGTTGTGAGACTATCGCAATGTCTG
CAGAAGAAGTGGATCGCCAAGCGCTTCCTTTTTTTTCGGCAGGTGCACCC
TTGTTTCGGACGGCTTCTGCTTCGCTTCTCACATTCTTTTGCCACCTCCT
TTTATTGCTGCTGCTGTGTTTGTTGTGTTTGCCGCCGCTCCCGCTGCTGC
TGCTGCTGCCGCTGCTGCTGCTCCTGTTGGGTGTTTCGTATGTATGTGTG
TGTGTTTCTTCTCGTGTCTCGGGTCATCGTGGGGTACGGACACTCCGTGG
ACCGACCAACCAGACTACGACGAGCGTGTCCTGCCGTCCATCGTGAACGA
GGTGACCAAGGCCGTCGTCGCCAAGTACAACGCCTCCGAGCTCCTCACCA
AGCGAGAGGTGAGTTGAGTCTCAACCGCCGTGTCCGCACTTGATCCCCTA
CAAGGAAGTTCCCAATCTACGATGCCCCCCCCCCCCGCCCCATAGTCCTA
GGTACAACCCCACCGTGGACGAGAGACGAGAGGTGAGGCCAGTTGTTATG
GAATTTTTTCCGAGTTGGAATCCGGGGGATCGACAGACAATGCTCAACCA
CCCCATAAAGGCAGAGCGCACCAAGGCCCTTCGTCAGTTGGCCCTCGCCT
CACAGACCCCTGTTTGATATCTAACCGATAAGGCTGTACACTCCACTACT
GTCAGCTTCTCGGAGCCAAGTTTGGGCAGCTAGAGTGGAGTGTGCGCAGA
GTATGCCTCGGATATGACAGCAATTAACGATGATCAGTTGGGAATTTCAA
CCAATTCCAGTCGGGGGATTAATGAGAAATTCCAACCAGGATCGCCCCAT
GATTTCCAAATTGGAATTCCTATTTTACGACCATGATTAACACACACTGC
ACCCCTGCTCCCCAAACTTTGCTCCAAGAGACTCACAGCAATGCGCTGTG
CGGCCTCGAAGGTTTGATTGAGAAAGGGTCTCTGTGAGGCGATTGCTGAG
TGCCAAAGCGCGTTTGTGCTTTTCCAACGAAGTGCGCACAACTCCTGCGA
CCTTATGTGTGTCTGGATGTAAAAGGTGTGAGTTCGCGATTCCAATCGGA
AAATCTCTCCATGACAACTTGCCTGAGTGTCAACCGCATGCCATACCGCG
GACGCCATGCCGTCGTGCTTGACCCCCGCACACGGGCGTTCCCAACCTGC
GATCCCCCCCTCCATCGAAGACACGGAAACAGCGCCAATGCGGATGTGCT
TCGTTTCCAGCATTTGGCTCTATGGCTGTTCGGTGCTCTCTGCAAGTTGG
CTCGTATTCAGCTAGCGGTTCGTTGCATCAACGTGACAACAAAAAAGTGA
TGTCGCCGTGTCCAGGTGCAGTATAGAGAATTCCAGGGAAAAAAAAGCAC
TGGATTTGTATGAAAGAAAGAAGAGAGGTACAGGGACAGGGATAGGTTTT
GCAATACGTGCAGGATTCGTGATCACACACGGAGGGGGGGGGCGATTTGT
CTTCTGACTTTGTTGTGTTTGACCCGGCGTCCATCCATCCCACGTTCACG
AGGCGTTTGTTCTCTTCGGTTATAGTTTTTTTTTCAGGTGTCCTCGTTCC
AACGACGTGCCCCCACGCCTTTGACTTGCCCATATCCATCGATCCTGGCG
TTTCCGTGGTCGTTATCATGTTGTTTCGTGTGTCATTCTTTTATGTTTGC
AGGCCGTGTCCAAGAACATCCGGGACGCGCTGCAGAAGCGGGCGGGTGAC
TTCGGCATCGTGATGGAGGACACGGCCATCACCCACCTCAGCTTCAGCAG
AGAATACACGGCGGCCGTCGAGGCCAAGCAGGTGAGACATCGACTGACAA
ACGCAGCGATATAGATCCGACTTTCTTTGTCGAACAGACGGAAGATAGCT
GTAGGCTTTTTTGTTGAGAGTCAGAAAAATTCAAAGGTTCGTCGAGGCGA
AATGGGTGCCAATGACTGAAAATGGCGATATTTTTGTCGAACCCCATGCG
AACCTCGATTCCGAGGTCTCCCAAGTTATCGCGTGATGTCGTGCCTCTTC
ATTACGACGGTAGTGTCATGTTGGAGAACGGTCACGGGACAAGACCGACT
CAACACTTCGTTCTCTTCACCTGCTGCGCTTGTTTCATATTCTTGGGCGC
CCCTGTACCTTGACCGCTCGATGAGCCTTGATTTTCCGAGGCAAAGCCCA
TGTAACCCCGCTCGCACCTGATTGCCGCGTTTCTTTTCTGTTCTTGGCCG
CCCCTAAACCAGTCGATTGATCTTCGATTTTTCTCGAGGCAAAAAACCGA
CAACCCCGCGCACGTCGTCGTCTGGTTGCCCCCAACAGGTTGCCCAACAA
GACTCGGAGCGTGCCAAGTACGTCGTCGAGAAGGCTCGACAGGAGAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9406:1254..6351+

>mRNA_Ecto-sp13_S_contig9406.21002.1 ID=mRNA_Ecto-sp13_S_contig9406.21002.1|Name=mRNA_Ecto-sp13_S_contig9406.21002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9406:1254..6351+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGGAGGGGATGCACTTCATCATCCCCTGGTTCGAGTGGCCTTACAT
CTACGACTCGCTAACTGGGTCCAAGGACTTGCAAATGGTGAGCATCACGC
TCCGTGTGCTGACCAAGCCTGATCCCTTCAAGCTCCCCTTCATCTACCGC
AGGTTGGGCAAGGACTACGACGAGCGTGTCCTGCCGTCCATCGTGAACGA
GGTGACCAAGGCCGTCGTCGCCAAGTACAACGCCTCCGAGCTCCTCACCA
AGCGAGAGGCCGTGTCCAAGAACATCCGGGACGCGCTGCAGAAGCGGGCG
GGTGACTTCGGCATCGTGATGGAGGACACGGCCATCACCCACCTCAGCTT
CAGCAGAGAATACACGGCGGCCGTCGAGGCCAAGCAGGTTGCCCAACAAG
ACTCGGAGCGTGCCAAGTACGTCGTCGAGAAGGCTCGACAGGAGAAG
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