mRNA_Ecto-sp13_S_contig9379.20978.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: D7FXL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL8_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 3.590e-222 Identity = 327/360 (90.83%), Postives = 333/360 (92.50%), Query Frame = 1
Query: 1 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGEISVKERQDAAADAAADAWLEGDEGEDEDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDGGEGEGEG-----GHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVVLA 1065
QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVL+VYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHA+PPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQS+SGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQV AEAQSVSEALG+PLYRAGDKIAKVEPTP EIS KERQDAA AAA AWLEG+ GEDEDD EEYDELQGRVFEVGVAEYREVDSGRAYG+ GHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGS A
Sbjct: 497 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSESGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVAAEAQSVSEALGVPLYRAGDKIAKVEPTPEEISEKERQDAAVHAAAAAWLEGEGGEDEDDVEEYDELQGRVFEVGVAEYREVDSGRAYGEXXXXXXXXXXXXXGHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSAAAATAA 856
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A6H5LCB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCB0_9PHAE) HSP 1 Score: 638 bits (1646), Expect = 4.200e-222 Identity = 327/367 (89.10%), Postives = 335/367 (91.28%), Query Frame = 1
Query: 1 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGEISVKERQDAAADAAADAWLEGDEGEDEDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDGGEGEGEGGHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVVLAQLEYCEQEPSSS 1101
+SDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVL+VYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHA+PPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQS+SGRMEARAVLRLLLRQDN+TPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTP EIS +ERQDAAADAAA AWLEG+ G DDGEEYDELQGRVFEVGVAEYREVDSGRAYGD DEGPLPPEDRE+PEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKV LAQLEYCEQEPSSS
Sbjct: 507 RSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSESGRMEARAVLRLLLRQDNLTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPEEISERERQDAAADAAAAAWLEGEGGGAGDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDXXXXXXXXXXXXXXXXXXXXXXXXDEGPLPPEDRESPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVALAQLEYCEQEPSSS 873
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: D7FN50_ECTSI (Death domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN50_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.660e-74 Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 1
Query: 13 KSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSD-SGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAK 618
+++ F QALS++L TW+SP LADYY + +K+ +V+ Y+RFL ALLG S E++ D+R RDP+N + M+H P R+ W A P TLAGT DP VIFRMG+DTRSCMGI+RSC NR L+GYL+QGN R VGVQS GRM+ARAVLR+L+R DN VLFMD +YY+SN D+SLE+QV+ EA++VS+ALGIPL+RAGD + +
Sbjct: 425 RTEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDESLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVIFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKNVSDALGIPLFRAGDTVPR 627
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S0JBG9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JBG9_9EUKA) HSP 1 Score: 135 bits (341), Expect = 6.880e-35 Identity = 65/185 (35.14%), Postives = 112/185 (60.54%), Query Frame = 1
Query: 49 LTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRA 600
++ W++P L Y +R DP++ ++ VR+L A+ GLSGET+R IR P N H+ P+DV +W++ GT + +F +G+D SC+ I + NRALMGY+LQ + R + V GR+ R+++RL+LR D +TPV+F D +++ L+++++ +A+ + E +G+P+ A
Sbjct: 3 MSEWRNPELLFRYLDDNRHDPQMEKLIVRWLRAIFGLSGETLRMIRRESPENVRHLLQIPQDVLLRWYSEK--CPGTSKCKTLFMVGEDAGSCLRIISNEGNRYNRALMGYVLQSHVRALVVTDTVGRVMCRSIIRLVLRSDTLTPVVFCDPMFFTLGYSQDLQRELLHQARQLEEQIGVPILHA 185
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S4EV14_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EV14_CHRCT) HSP 1 Score: 132 bits (332), Expect = 3.730e-30 Identity = 63/186 (33.87%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 49 LTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAG 603
+ W++P L Y +R+DP + + +R+L ++ GLS ET+R IR P N H+ P+DV +W+++ GT + +F +G+D SC+ I S NRALMGY+LQ + R + V GR+ R+++R+L+R D +TPV+F D +++ S L+++++++A+ + E + +P+ AG
Sbjct: 494 IAEWRNPELLFRYLDDNRQDPRMEALIIRWLRSIFGLSNETLRMIRRESPQNVRHLLQVPQDVLLRWYSDE--CPGTSRCRTLFMVGEDAGSCLRIISNEGSRYNRALMGYVLQSHVRALVVTDTVGRVMVRSLIRILIRSDTLTPVIFCDPMFFTSGYSKDLQRELLSQARDLQEHMQLPVVHAG 677
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S3ACL8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACL8_9EUKA) HSP 1 Score: 125 bits (315), Expect = 2.290e-28 Identity = 67/203 (33.00%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 34 ALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQ-NRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGE 639
A++ W P L Y +R+D ++ + R++ A+LGLS ET+R +R +N H+K P+ +W++ GT +F +G+D SC+ I + Q NRALMGY+LQ + R + V+ SGR+ AR+++RLLLR D +TPV+F D V++ + L+ + A+A+++ +P+ AG + ++P E
Sbjct: 177 AIAKAFDEWDHPELLFRYLDDNREDVQMAPLIKRWIRAILGLSDETLRQLRREAAANVRHLKRMPQAALLRWYSE--ACPGTSSMVTLFLLGEDAGSCLRIIGNEGNQYNRALMGYVLQSHVRALVVRDASGRVLARSLVRLLLRSDTLTPVIFCDPVFFTKHYSRELQASLHAQARALELHTRVPVVHAGSLLPLLDPPLAE 377
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S0P113_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P113_9EUKA) HSP 1 Score: 117 bits (292), Expect = 2.110e-27 Identity = 62/176 (35.23%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 10 AKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSL 534
A+S+ G+AL W++P L Y +R D + + R+L ++LGLS ET+R +R +N H++ FP+ V +W++ + GT +V+F +G+D SC+ I + N+ALMGY+LQ + R + V SGR+ AR+++RLLLR D TPV+F D ++++ + +
Sbjct: 44 ARSERIGRALGE----WRNPELLFRYLSDNRDDARMAALVKRWLRSILGLSDETLRQMRRESAANVRHLRMFPKAVLLRWYSE--SCPGTSSMKVLFMLGEDAGSCLRIVGNEGNRYNKALMGYVLQSHVRALVVLDASGRVLARSLVRLLLRSDTRTPVIFCDPIFFSKSFSEDV 213
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S1ELQ8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELQ8_HEMAN) HSP 1 Score: 118 bits (295), Expect = 2.000e-25 Identity = 69/202 (34.16%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 37 LSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALL-GLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLV---GVQSDSGRME--ARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVE 624
L+ +L W+ P L + + D E +E+ L A++ G + +IR RD N +H V +W A+ +L GT D + + MG+DTR+CM + S + + ++GYLLQGN RL+ V+ + GR ARAV RLLLR+DN VLF+D Y+ D ++EA+G+ LYRA + + E
Sbjct: 372 LAEVLGGWRMPQLLLQMWELQGDDAECVELLKTLLRAMVSGDPKARIDEIRYRDQRNKQHFDRLDTAVVAKWSAHDGSLPGTDDVEALMMMGEDTRTCMAVHPSNANTQKGMLGYLLQGNTRLLVAGAVRGEDGRARFTARAVARLLLRRDNGETVLFVDRSYFEGERDEEAXXXXXXXXXXLAEAVGVRLYRAQNTLPPPE 573
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S1EIS6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS6_HEMAN) HSP 1 Score: 107 bits (268), Expect = 7.100e-25 Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 10 AKSDAFGQALSTLLTTWQSPYALADYYVMHR-KDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGV 411
A+ +A ++L+ +LTTW+ P+ L Y +H+ ++P+V ++ RFL ALL ET+RD+R RDPSN H+ + +W A G+ DP+ MG D+ +CM IR NRAL+ Y+ QGNAR++GV
Sbjct: 2 AEFEAMSRSLTEVLTTWRQPHLLFHYLEIHQNRNPDVASLHKRFLKALLRCGNETLRDLRYRDPSNRRHLDALDKTAAARWEAGEGP--GSTDPEDFLMMGHDSGTCMQIRSKNINTNRALISYISQGNARMLGV 134
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S2JBG8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JBG8_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 1.050e-17 Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 34 ALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIR-RSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLL 462
+++T W SP L Y + D ++ + R+L +LLGLS ET+R+IR P N H++ P +W++ GT +V+F +G+D SC+ I + NRALM Y+LQ R + V+++ GR+ AR+++RLL+
Sbjct: 288 SIATAFAEWPSPELLFRYLDANSADAQMARLVKRWLRSLLGLSDETLREIRREAPPNVRHLQSLPRAAVLRWYSE--ACPGTSSMRVLFTLGEDAGSCLRITGNEGNKYNRALMSYVLQSTVRALVVRNEEGRVLARSLVRLLV 429 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9379.20978.1 >prot_Ecto-sp13_S_contig9379.20978.1 ID=prot_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=368bp QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALback to top mRNA from alignment at Ecto-sp13_S_contig9379:1541..5899- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9379.20978.1 ID=mRNA_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9379:1541..5899- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9379:1541..5899- >mRNA_Ecto-sp13_S_contig9379.20978.1 ID=mRNA_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9379:1541..5899- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |