mRNA_Ecto-sp13_S_contig9379.20978.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9379.20978.1
Unique NamemRNA_Ecto-sp13_S_contig9379.20978.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: D7FXL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL8_ECTSI)

HSP 1 Score: 638 bits (1646), Expect = 3.590e-222
Identity = 327/360 (90.83%), Postives = 333/360 (92.50%), Query Frame = 1
Query:    1 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGEISVKERQDAAADAAADAWLEGDEGEDEDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDGGEGEGEG-----GHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVVLA 1065
            QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVL+VYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHA+PPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQS+SGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQV AEAQSVSEALG+PLYRAGDKIAKVEPTP EIS KERQDAA  AAA AWLEG+ GEDEDD EEYDELQGRVFEVGVAEYREVDSGRAYG+             GHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGS      A
Sbjct:  497 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSESGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVAAEAQSVSEALGVPLYRAGDKIAKVEPTPEEISEKERQDAAVHAAAAAWLEGEGGEDEDDVEEYDELQGRVFEVGVAEYREVDSGRAYGEXXXXXXXXXXXXXGHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSAAAATAA 856          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A6H5LCB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCB0_9PHAE)

HSP 1 Score: 638 bits (1646), Expect = 4.200e-222
Identity = 327/367 (89.10%), Postives = 335/367 (91.28%), Query Frame = 1
Query:    1 QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGEISVKERQDAAADAAADAWLEGDEGEDEDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDGGEGEGEGGHLTEDRAFQAGIAQYDEGPLPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVVLAQLEYCEQEPSSS 1101
            +SDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVL+VYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHA+PPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQS+SGRMEARAVLRLLLRQDN+TPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTP EIS +ERQDAAADAAA AWLEG+ G   DDGEEYDELQGRVFEVGVAEYREVDSGRAYGD                        DEGPLPPEDRE+PEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKV LAQLEYCEQEPSSS
Sbjct:  507 RSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSESGRMEARAVLRLLLRQDNLTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPEEISERERQDAAADAAAAAWLEGEGGGAGDDGEEYDELQGRVFEVGVAEYREVDSGRAYGDXXXXXXXXXXXXXXXXXXXXXXXXDEGPLPPEDRESPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVRKVALAQLEYCEQEPSSS 873          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: D7FN50_ECTSI (Death domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN50_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.660e-74
Identity = 121/203 (59.61%), Postives = 158/203 (77.83%), Query Frame = 1
Query:   13 KSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSD-SGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAK 618
            +++ F QALS++L TW+SP  LADYY + +K+ +V+  Y+RFL ALLG S E++ D+R RDP+N + M+H P   R+ W A P TLAGT DP VIFRMG+DTRSCMGI+RSC   NR L+GYL+QGN R VGVQS   GRM+ARAVLR+L+R DN   VLFMD +YY+SN D+SLE+QV+ EA++VS+ALGIPL+RAGD + +
Sbjct:  425 RTEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDESLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVIFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKNVSDALGIPLFRAGDTVPR 627          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S0JBG9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JBG9_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 6.880e-35
Identity = 65/185 (35.14%), Postives = 112/185 (60.54%), Query Frame = 1
Query:   49 LTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRA 600
            ++ W++P  L  Y   +R DP++ ++ VR+L A+ GLSGET+R IR   P N  H+   P+DV  +W++      GT   + +F +G+D  SC+ I     +  NRALMGY+LQ + R + V    GR+  R+++RL+LR D +TPV+F D +++       L+++++ +A+ + E +G+P+  A
Sbjct:    3 MSEWRNPELLFRYLDDNRHDPQMEKLIVRWLRAIFGLSGETLRMIRRESPENVRHLLQIPQDVLLRWYSEK--CPGTSKCKTLFMVGEDAGSCLRIISNEGNRYNRALMGYVLQSHVRALVVTDTVGRVMCRSIIRLVLRSDTLTPVVFCDPMFFTLGYSQDLQRELLHQARQLEEQIGVPILHA 185          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S4EV14_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EV14_CHRCT)

HSP 1 Score: 132 bits (332), Expect = 3.730e-30
Identity = 63/186 (33.87%), Postives = 112/186 (60.22%), Query Frame = 1
Query:   49 LTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAG 603
            +  W++P  L  Y   +R+DP +  + +R+L ++ GLS ET+R IR   P N  H+   P+DV  +W+++     GT   + +F +G+D  SC+ I     S  NRALMGY+LQ + R + V    GR+  R+++R+L+R D +TPV+F D +++ S     L+++++++A+ + E + +P+  AG
Sbjct:  494 IAEWRNPELLFRYLDDNRQDPRMEALIIRWLRSIFGLSNETLRMIRRESPQNVRHLLQVPQDVLLRWYSDE--CPGTSRCRTLFMVGEDAGSCLRIISNEGSRYNRALMGYVLQSHVRALVVTDTVGRVMVRSLIRILIRSDTLTPVIFCDPMFFTSGYSKDLQRELLSQARDLQEHMQLPVVHAG 677          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S3ACL8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACL8_9EUKA)

HSP 1 Score: 125 bits (315), Expect = 2.290e-28
Identity = 67/203 (33.00%), Postives = 114/203 (56.16%), Query Frame = 1
Query:   34 ALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQ-NRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVEPTPGE 639
            A++     W  P  L  Y   +R+D ++  +  R++ A+LGLS ET+R +R    +N  H+K  P+    +W++      GT     +F +G+D  SC+ I  +   Q NRALMGY+LQ + R + V+  SGR+ AR+++RLLLR D +TPV+F D V++  +    L+  + A+A+++     +P+  AG  +  ++P   E
Sbjct:  177 AIAKAFDEWDHPELLFRYLDDNREDVQMAPLIKRWIRAILGLSDETLRQLRREAAANVRHLKRMPQAALLRWYSE--ACPGTSSMVTLFLLGEDAGSCLRIIGNEGNQYNRALMGYVLQSHVRALVVRDASGRVLARSLVRLLLRSDTLTPVIFCDPVFFTKHYSRELQASLHAQARALELHTRVPVVHAGSLLPLLDPPLAE 377          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S0P113_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P113_9EUKA)

HSP 1 Score: 117 bits (292), Expect = 2.110e-27
Identity = 62/176 (35.23%), Postives = 104/176 (59.09%), Query Frame = 1
Query:   10 AKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGI-RRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSL 534
            A+S+  G+AL      W++P  L  Y   +R D  +  +  R+L ++LGLS ET+R +R    +N  H++ FP+ V  +W++   +  GT   +V+F +G+D  SC+ I     +  N+ALMGY+LQ + R + V   SGR+ AR+++RLLLR D  TPV+F D ++++ +    +
Sbjct:   44 ARSERIGRALGE----WRNPELLFRYLSDNRDDARMAALVKRWLRSILGLSDETLRQMRRESAANVRHLRMFPKAVLLRWYSE--SCPGTSSMKVLFMLGEDAGSCLRIVGNEGNRYNKALMGYVLQSHVRALVVLDASGRVLARSLVRLLLRSDTRTPVIFCDPIFFSKSFSEDV 213          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S1ELQ8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELQ8_HEMAN)

HSP 1 Score: 118 bits (295), Expect = 2.000e-25
Identity = 69/202 (34.16%), Postives = 105/202 (51.98%), Query Frame = 1
Query:   37 LSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALL-GLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLV---GVQSDSGRME--ARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKIAKVE 624
            L+ +L  W+ P  L   + +   D E +E+    L A++ G     + +IR RD  N +H       V  +W A+  +L GT D + +  MG+DTR+CM +  S +   + ++GYLLQGN RL+    V+ + GR    ARAV RLLLR+DN   VLF+D  Y+    D             ++EA+G+ LYRA + +   E
Sbjct:  372 LAEVLGGWRMPQLLLQMWELQGDDAECVELLKTLLRAMVSGDPKARIDEIRYRDQRNKQHFDRLDTAVVAKWSAHDGSLPGTDDVEALMMMGEDTRTCMAVHPSNANTQKGMLGYLLQGNTRLLVAGAVRGEDGRARFTARAVARLLLRRDNGETVLFVDRSYFEGERDEEAXXXXXXXXXXLAEAVGVRLYRAQNTLPPPE 573          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S1EIS6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS6_HEMAN)

HSP 1 Score: 107 bits (268), Expect = 7.100e-25
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   10 AKSDAFGQALSTLLTTWQSPYALADYYVMHR-KDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGV 411
            A+ +A  ++L+ +LTTW+ P+ L  Y  +H+ ++P+V  ++ RFL ALL    ET+RD+R RDPSN  H+    +    +W A      G+ DP+    MG D+ +CM IR      NRAL+ Y+ QGNAR++GV
Sbjct:    2 AEFEAMSRSLTEVLTTWRQPHLLFHYLEIHQNRNPDVASLHKRFLKALLRCGNETLRDLRYRDPSNRRHLDALDKTAAARWEAGEGP--GSTDPEDFLMMGHDSGTCMQIRSKNINTNRALISYISQGNARMLGV 134          
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Match: A0A7S2JBG8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JBG8_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 1.050e-17
Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 1
Query:   34 ALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIFRMGDDTRSCMGIR-RSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVLRLLL 462
            +++T    W SP  L  Y   +  D ++  +  R+L +LLGLS ET+R+IR   P N  H++  P     +W++      GT   +V+F +G+D  SC+ I     +  NRALM Y+LQ   R + V+++ GR+ AR+++RLL+
Sbjct:  288 SIATAFAEWPSPELLFRYLDANSADAQMARLVKRWLRSLLGLSDETLREIRREAPPNVRHLQSLPRAAVLRWYSE--ACPGTSSMRVLFTLGEDAGSCLRITGNEGNKYNRALMSYVLQSTVRALVVRNEEGRVLARSLVRLLV 429          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9379.20978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FXL8_ECTSI3.590e-22290.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCB0_9PHAE4.200e-22289.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN50_ECTSI1.660e-7459.61Death domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0JBG9_9EUKA6.880e-3535.14Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S4EV14_CHRCT3.730e-3033.87Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S3ACL8_9EUKA2.290e-2833.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0P113_9EUKA2.110e-2735.23Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S1ELQ8_HEMAN2.000e-2534.16Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S1EIS6_HEMAN7.100e-2540.00Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S2JBG8_9EUKA1.050e-1734.72Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9379contigEcto-sp13_S_contig9379:1541..5899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score641.0
Seed ortholog evalue3.5e-181
Seed eggNOG ortholog2880.D7FXL8
Model size1104
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2ES5T@1,2SUTI@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-28_002190.1
Cds size1104
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9379.20978.1prot_Ecto-sp13_S_contig9379.20978.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9379 1541..5899 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464206.1907408-CDS-Ecto-sp13_S_contig9379:1540..17141681464206.1907408-CDS-Ecto-sp13_S_contig9379:1540..1714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 1541..1714 -
1681464206.2045732-CDS-Ecto-sp13_S_contig9379:2453..28401681464206.2045732-CDS-Ecto-sp13_S_contig9379:2453..2840Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 2454..2840 -
1681464206.2212303-CDS-Ecto-sp13_S_contig9379:3524..36931681464206.2212303-CDS-Ecto-sp13_S_contig9379:3524..3693Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 3525..3693 -
1681464206.233695-CDS-Ecto-sp13_S_contig9379:4134..42561681464206.233695-CDS-Ecto-sp13_S_contig9379:4134..4256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 4135..4256 -
1681464206.2454705-CDS-Ecto-sp13_S_contig9379:5306..54441681464206.2454705-CDS-Ecto-sp13_S_contig9379:5306..5444Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 5307..5444 -
1681464206.2556894-CDS-Ecto-sp13_S_contig9379:5785..58991681464206.2556894-CDS-Ecto-sp13_S_contig9379:5785..5899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9379 5786..5899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9379.20978.1

>prot_Ecto-sp13_S_contig9379.20978.1 ID=prot_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=368bp
QSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLEVYVRFLLAL
LGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHANPPTLAGTIDPQVIF
RMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSDSGRMEARAVL
RLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRA
GDKIAKVEPTPGEISVKERQDAAADAAADAWLEGDEGEDEDDGEEYDELQ
GRVFEVGVAEYREVDSGRAYGDGGEGEGEGGHLTEDRAFQAGIAQYDEGP
LPPEDREAPEMCELIEMDGLSPWVYSDGAIGEATNPGVVQRDLSHAGSVR
KVVLAQLEYCEQEPSSS*
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mRNA from alignment at Ecto-sp13_S_contig9379:1541..5899-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9379.20978.1 ID=mRNA_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9379:1541..5899- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAGCGATGCTAAGAGCGACGCTTTCGGACAAGCCCTGTCCACCTTGCT GACGACGTGGCAATCTCCCTATGCCCTAGCCGACTACTACGTCATGCACA GGAAGGACCCTGAGGTGGGTTGTTGTTGCTGTTGTTGTTGTGGTGGTTGT TACTCATCGTTCTAATCAAATCAGGTATCGAAGGTCTACGATATGGTTGT TGCTGTTGTTGTTGCTCTGTATTTGTCGATCAGAATCAGGTGTTGAAGGG TGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCCTCTCTACTGA TCAACGCCAGATACTGAAGGTCTGCGTTGTGGTTTTGGATGTTGTCGCTG TTGTTGTTGCTGCTGTTGCTGTCTCTCCGTCGATCGAAACCGGGTTTCGA TGGTCTGTTCGTTGCCTTTGCGGTTGTTATTTTCTCTCTGTCGGATCAAA ACCAGGTATTGGAGGTATACGTCCGGTTCTTGCTGGCGCTCCTCGGCCTG TCGGGCGAAACCGTGCGCGACATCCGCATCAGAGACCCGTCTAACTTCGA GCACATGAAGCATTTCCCGGAGGACGTGCGACGTCAGTGGCACGTGAGAG GGGTACATTGCCATCACCACGCCACGACTAACTAGGCGACGCTCTCCGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGCTCACGGTTGAAAGGGCTTTGGG GTTTGTTTAGGCCTTGAACATGGGAACCAGGTTCCGCCAGGGGGGGGGGN NNNNNNNNNGGGCTAGGGGCGGGGGGGGGGGGCACCTCGCACCCACCCCC CCCCGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGCGTGCTCACGTTGAAGATGCCTTAGCGGTTAGTTAGGCCATTGAC CATGCGACCATGTGTCCTCGAGAGTGGACGGGGCATTGTTCCCACAGGAC CGATCGATTACCGATGGCCAATCTTTCCTTGCCAACGTTGCCTGAAAATG GTCTTCTGTCTATCCTGTCGGTAGTACTTGTCTATCCTATCGATACCAAA TGTCTATCCTTTCGATGTCGCGTGTCTATCCTATCGATATCACCTATCTA TCCTGTCGATATTACTTGTCCATCCCATCGACATCAGTTCCGCCGGGCGG GGTGGTACAATCTAGTTGCGGGTCCGGAACGACACCAACCACTTCATAGT GGTCAGGCCGAAAGCGCTCTGTCCCGCAGAGGTCGAACGAACGTGTGGTC TCTGTTAGGCAGTTGGTGCTGGAACGAAGAACAGTACCCATACGTGTTGC GGTCTGTCGCTCTCTAACAAACCCTGGCGGACGAGCCCGACTCTCAGATT TACTGGTGGTAGTATCTGCAACGATGGCGAGCCTTCAGCTCCTCTCTGTG GGCCACGTTGAAATGGATCTACAACATAGTGTACAACGATAGGATGTTTT TCGAAGTCCCAAATGTTGGTGACCTTCTTTGTAAATCGACCAACCTGTGT CTCCCTATCGCTCCAGTGCGGGCATTGTGAGGATGCGAGATCTATGGTAG CGAAAGACCACGGCGTGTCTTCACATGAGCACATCCCCAAACCTCCTGTG TCGCGCCACCGCCCGAAACGCGTTTTTGCCTCTGCATCCACAGGCCAATC CGCCTACCCTCGCGGGTACCATAGACCCCCAAGTGATCTTCCGCATGGGG GACGACACCAGGAGTTGCATGGGGATTCGGCGTTCCTGTTCCGCGCAAAA TCGTGCTCTCATGGGGTGAGGAATCCGGTCCTCCCTCCGCGTTGGAGCCC TCTGTTAATTTTGTCGTTTTTTGTTGGTGTTTCACACTCTGTTTGTCATT GAATTTCTTGGCGTCCTCTCGTGGACTTGGAGTTCCCTTTCTTCTACCCC CTTTGGGGAGAACGCCAGCTTCTATTTTGTGTTCTGCCATGAGCTCCACG GCGCAAGTACGAAAAAAAATGGTCTCAGACATCTGGCGAAAGGCTCAGGA CGACGAACAATCAACGCTGTGGCTGGCTCCTCAGCTTTGATTGGTTTGCA TGAACAACGGCAGAACATTGCTCACGATACACATAGCCGTCTCGCGTATG TACAGCAGCGGACAAGCGCACAAGCGGGGAATGTACCCCACTGACGTTTC CCGGTGCTCCGCCCTGCTGCCCCCCCTTTCGTCATCGTTTTGTTCCTCGT GTGCAGCTACCTCCTGCAGGGGAACGCGCGTCTGGTTGGGGTGCAGTCGG ACAGCGGCCGCATGGAGGCCCGGGCCGTGCTGAGACTGCTCCTCAGACAG GACAACATGACCCCTGTCCTGTTCATGGACTCGGTGTACTACGCCTCTAA CCTGGACTCCTCGTTAGAGCAGCAGGTAGATCGTATGATGGCTGCAGCTG CGCCCCCCCCCCCCCTGGTGGTGGCTCTTACATAGATGGTGCCAATACCT GGCGCACTCGCTCCGTTTTTTTTTTAATTTCCCAGTGCCAGTATACTGCC GGCGAAACGGGCTCACGCTTACCCGCACTACTGGACGTCGCGCACTTTGA TAAGCAACTTTGTCCTTTGTCCGCACACGCGGATGGTCTCCGTCTGTTTG CTCGGTGTATGAAGGCATAGAGACGTCTTCTGCTGTTTTTCTTTTGTTGT CGTTGTTGTTGTTGTTGTTGTTGGTGTTGGTGTTGTCTGCTGGGGTATCG TCGTCGTCCACGCCGTCGCCGTTCGATACCAAGCGCATGAGTTGCTTCCA TGCATCGATCGTTCTGTAGTCGATGTCGTGGTTGACTAAAGGCCGCCGTG GCACTCAAAATACCCTTCACCGTTACTGTCGCGCCTCGCCATTTTCTTTT CTCTTTGTGTGCCTCGATTCCCAGAGTATGTCCTTTCGAAGACTTTCCTC CTTCGACCGCCACCATCGAAGAGGGGGGCGACGCAGGATTTTTTTAAAGA CCTCCTACTCTTCATGCCTTATCCCGCATCCGTCCACTGTAAGGTCAAAG GTCTAATGACTACGGCATGTGTTTTCATGAGTACATCCGTCCACACGAAA ACAACACAGGTGGTAGCAGAAGCGCAGAGCGTGAGCGAGGCCTTGGGGAT ACCCCTCTATCGCGCCGGGGACAAAATCGCCAAGGTCGAGCCTACGCCGG GGGAAATTTCCGTAAAGGAGCGGCAAGATGCGGCGGCCGATGCCGCGGCA GACGCCTGGTTAGAAGGAGATGAGGGGGAGGACGAGGACGACGGGGAGGA ATATGATGAATTGCAGGGGAGGGTTTTCGAAGTTGGGGTGGCGGAGTACC GGGAGGTGGATTCTGGGAGGGCTTACGGCGATGGTGGCGAGGGGGAGGGC GAGGGGGGGCATTTGACGGAAGACCGGGCGTTCCAAGCGGGGATAGCGCA GTATGACGAGGGTCCCCTGCCTCCCGAGGACCGAGAAGCACCGGAGGTGA GTTCGTGGGAAGAGAGGGGAGAGAGGGGGAGAGAGGGGGGGGGGGAGCAG TGTGAGAAAGAGCGGGAGAGAGGGGGGGTGGTGGGGGGAGAGAGAGTGAG AGAGGGTGTGTGTGTGAAACAGGGAGAGGGAGAGGGAGGGGAGAGGGAGA GAGTGAAGTTGGTGCTCTTCTTTCTTCTCGCGTGCGCATGGAGTAGTGAA TGGCTCGTCGTTGTCTATTTCTCACTCATCGCGGATCAGGGTTTCCATAG AATGATTGGATTTGCTCTCGGTGATCCTGATCCCCCTATGGGAGGGGTAG GCGACTAGCCTCGAGAAACATGCACACTTGCTCTCTACGACTCCGGGTTG TCCTATATAGTTGCCTTGACGGGAGCCAGGACCCGACTACCACTCAAACA AGTTGTTGTTGTTGTTGTCTTCACATAAACAACCGTTCTGGTCTCCGCTC AGCACCTTCTGACATCCATACTGGCCCAACTGACGCAGACGCCTTCCGTG GTCACAAGCCCCAAAGTACGTGCAATAAATGCCCTTCACTTGTCCGTATC CAAGAACACCCGCTCAGTGCTCGAAGCACATTCCCTCATTCTGAAGGGTT GTTTCCATTTCTCCTCCGTCGTCTCTTGTTGAGGGTTCGCCCACCCCTGT CTGTAGACTTGTACTAGCCAGAATAGATAGGACGAGAACCCCCCCACACG CCTATCCGCCCTCTTTCTCTTGATGGTGTCGGCAGATGTGCGAGCTCATC GAGATGGACGGGCTGTCTCCCTGGGTGTACTCCGACGGGGCTATCGGGGA AGCCACCAACCCGGGGGTGGTGCAGAGAGACCTCTCCCACGCGGGCTCCG TGAGGAAGGTGGTCTTGGCTCAGCTAGAGTACTGCGAGCAAGAGCCCTCC TCCTCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9379:1541..5899-

>mRNA_Ecto-sp13_S_contig9379.20978.1 ID=mRNA_Ecto-sp13_S_contig9379.20978.1|Name=mRNA_Ecto-sp13_S_contig9379.20978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9379:1541..5899- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAGCGATGCTAAGAGCGACGCTTTCGGACAAGCCCTGTCCACCTTGCT
GACGACGTGGCAATCTCCCTATGCCCTAGCCGACTACTACGTCATGCACA
GGAAGGACCCTGAGGTATTGGAGGTATACGTCCGGTTCTTGCTGGCGCTC
CTCGGCCTGTCGGGCGAAACCGTGCGCGACATCCGCATCAGAGACCCGTC
TAACTTCGAGCACATGAAGCATTTCCCGGAGGACGTGCGACGTCAGTGGC
ACGCCAATCCGCCTACCCTCGCGGGTACCATAGACCCCCAAGTGATCTTC
CGCATGGGGGACGACACCAGGAGTTGCATGGGGATTCGGCGTTCCTGTTC
CGCGCAAAATCGTGCTCTCATGGGCTACCTCCTGCAGGGGAACGCGCGTC
TGGTTGGGGTGCAGTCGGACAGCGGCCGCATGGAGGCCCGGGCCGTGCTG
AGACTGCTCCTCAGACAGGACAACATGACCCCTGTCCTGTTCATGGACTC
GGTGTACTACGCCTCTAACCTGGACTCCTCGTTAGAGCAGCAGGTGGTAG
CAGAAGCGCAGAGCGTGAGCGAGGCCTTGGGGATACCCCTCTATCGCGCC
GGGGACAAAATCGCCAAGGTCGAGCCTACGCCGGGGGAAATTTCCGTAAA
GGAGCGGCAAGATGCGGCGGCCGATGCCGCGGCAGACGCCTGGTTAGAAG
GAGATGAGGGGGAGGACGAGGACGACGGGGAGGAATATGATGAATTGCAG
GGGAGGGTTTTCGAAGTTGGGGTGGCGGAGTACCGGGAGGTGGATTCTGG
GAGGGCTTACGGCGATGGTGGCGAGGGGGAGGGCGAGGGGGGGCATTTGA
CGGAAGACCGGGCGTTCCAAGCGGGGATAGCGCAGTATGACGAGGGTCCC
CTGCCTCCCGAGGACCGAGAAGCACCGGAGATGTGCGAGCTCATCGAGAT
GGACGGGCTGTCTCCCTGGGTGTACTCCGACGGGGCTATCGGGGAAGCCA
CCAACCCGGGGGTGGTGCAGAGAGACCTCTCCCACGCGGGCTCCGTGAGG
AAGGTGGTCTTGGCTCAGCTAGAGTACTGCGAGCAAGAGCCCTCCTCCTC
TTGA
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