mRNA_Ecto-sp13_S_contig9367.20964.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: D8LEB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB5_ECTSI) HSP 1 Score: 1103 bits (2854), Expect = 0.000e+0 Identity = 582/650 (89.54%), Postives = 601/650 (92.46%), Query Frame = 1
Query: 1 MPGGQGSSRVESASHAQQLYDFCAVFWRSTPHPFAQITMLLLSSALVATLNDKRVLDAGLRLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDGSGASNSRPRRPPGDGGEPDPGAAAEKMGDGAVASGGRGGGDSDSADRSASTTLGWDATPILSSEKDNASALGVSPTVSRGGASFEKKSEVSFDRGGSLTPRMQRPPTTPASGHQISVTGAASTSLPQPFGLTPTSASVTQDEALGHAVGAAASRGDGQSPPSRQMVSQTPVAGMVSERQSFFYQSVGKNAAQFAIVSESRLEPEDDGPIETIDRPWHNSTRAASTCGDASAPVGQVADSNRGPSPGSSGRWPSPQSEGGGDVGVFFSPAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDIEEGAASRNKMAPSEAMSEFPEPRWF 1950
M GGQGS RVESASHA+QL+DF AVFWRSTPHPFAQ+TMLLLSSALVATLND+RVLDAGL LSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNIS+TFAYVVKQILRRE+LFA EMEGVIDAAEVELINNLPPLVMPYYCTEVMRQC+KKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERV NT QPDCFRVMLHMFTLLYLLVLPVISYD LGYFV+LEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDG GA+NS+PRRPPGDG EPDPGAA EKMGDGAVA + STTLGWD TP+LSSEKD+ SALGVSPTVSRGGASFEKK EVSFDRGGSLTPRM RPPTT ASGHQISVTGAASTSLPQP G TPTSASV+QDEALGHAV AAASRG GQSPPSRQ SQTPVAGMV ERQS FYQSVGKNAAQFAIVSES EPEDDGPIET++RPWHNSTRAASTC D S PVGQVADSNR PSPGSSGRWPSPQSEGGGDVGV S AVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVD+EEGAAS +KMAPSEA+SEFPEPRWF
Sbjct: 1 MSGGQGSFRVESASHARQLHDFFAVFWRSTPHPFAQMTMLLLSSALVATLNDERVLDAGLHLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISVTFAYVVKQILRREQLFADEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCIKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVRNTPQPDCFRVMLHMFTLLYLLVLPVISYDTLGYFVVLEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDGGGATNSKPRRPPGDGSEPDPGAAVEKMGDGAVAGXXXXXXXXXGGAKFISTTLGWDTTPVLSSEKDSTSALGVSPTVSRGGASFEKKGEVSFDRGGSLTPRMPRPPTTAASGHQISVTGAASTSLPQPSGPTPTSASVSQDEALGHAVDAAASRGGGQSPPSRQ--SQTPVAGMVPERQSSFYQSVGKNAAQFAIVSESCHEPEDDGPIETVERPWHNSTRAASTCRDTSTPVGQVADSNRDPSPGSSGRWPSPQSEGGGDVGVSVSSAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDMEEGAASGDKMAPSEAVSEFPEPRWF 648
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A6H5K5N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N9_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 4.440e-147 Identity = 237/278 (85.25%), Postives = 247/278 (88.85%), Query Frame = 1
Query: 1117 ATPILSSEKDNASALGVSPTVSRGGASFEKKSEVSFDRGGSLTPRMQRPPTTPASGHQISVTGAASTSLPQPFGLTPTSASVTQDEALGHAVGAAASRGDGQSPPSRQMVSQTPVAGMVSERQSFFYQSVGKNAAQFAIVSESRLEPEDDGPIETIDRPWHNSTRAASTCGDASAPVGQVADSNRGPSPGSSGRWPSPQSEGGGDVGVFFSPAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDIEEGAASRNKMAPSEAMSEFPEPRWF 1950
ATPILSSEKD+ SALGVSPTVSRGGASFEKKS+VSFD GGSLTPRM RPPTTPASG QISVTGAASTSLPQPFG TPTSASV+QDEALGHAVGAAASRG QSPPSRQMVSQTPVAGMVS+RQS FYQSVGKNAAQFAIVSES LEPEDDG IET++RPWHNSTRAAS CGDASAPVGQVADSNR PSPGSSGRWPSPQSEGGGDV VFFSPA LKEGPLPV RGKPRPGRGKPP+VDIE+GAAS +KMAPSEAMS+ PEPRWF
Sbjct: 16 ATPILSSEKDSTSALGVSPTVSRGGASFEKKSDVSFDSGGSLTPRMPRPPTTPASGQQISVTGAASTSLPQPFGPTPTSASVSQDEALGHAVGAAASRGGRQSPPSRQMVSQTPVAGMVSKRQSSFYQSVGKNAAQFAIVSESCLEPEDDGSIETVERPWHNSTRAASMCGDASAPVGQVADSNRDPSPGSSGRWPSPQSEGGGDVWVFFSPA---------------LKEGPLPVLRGKPRPGRGKPPLVDIEDGAASGDKMAPSEAMSKIPEPRWF 278
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A8J5X7R2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7R2_DIALT) HSP 1 Score: 104 bits (260), Expect = 2.980e-20 Identity = 95/312 (30.45%), Postives = 141/312 (45.19%), Query Frame = 1
Query: 7 GGQGSS-RVESASHAQQLYDFCAVFWRSTP-HPFAQITMLLLSSALVATLNDKRVLDAG---LRLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI------------DDTQLARRIMNI---SITFAYVVKQILRREKLFAGEMEGVI---DAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFV 873
GG+G+ ++S+++ A+ R P P T+ + + +A L RV D G + L N T L FL+VFRTN SY+RWWEGR +WG + C T+Q I + A R+ + ++ FA V KQ LR E+ + + G+I A EV+ + P V E + + GL DS + +D +S + MER+ T P + V L F +L+LL LP L + +L + AY +LGL+ +E PFGRD DL LD+ V
Sbjct: 28 GGEGNQIMLDSSTYGYWPESLFALHGRPLPLGPLLIYTLWAIGATTLAML--VRVGDDGEPTITLHVNVLGVSGTALFFLLVFRTNASYDRWWEGRKMWGDVTACCRNFTRQVIAHIGPEPRGALFAPASEPSAAERVDTLVRWAVAFAIVAKQHLRDERELSTTLRGIIRTTHAREVQAAKHRPLFVAERITME-LAAAQRAGLLDSVEKMA-------LDANLSAMVRAVTSMERIVRTRMPFAYIVHLRSFLVLWLLALPFTMVVYLNWGGVLACTLIAYSLLGLETIGVEVEQPFGRDYCDLPLDQLV 329
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A518G6P0_9BACT (Bestrophin, RFP-TM, chloride channel n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518G6P0_9BACT) HSP 1 Score: 100 bits (248), Expect = 1.160e-19 Identity = 76/238 (31.93%), Postives = 115/238 (48.32%), Query Frame = 1
Query: 208 LQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQ-AAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAF-YLG 915
L IL +L+VFRTN +YNRWWE R LWG + + L+ + + +T+ RR+ + I F ++ LR EK G + +D E+E I+ + Y ++ + G D + R IDV +L ER+ T +R+ L++L LP ++ I ++TAY MLGL++ A+H+E+PFG DE DL LD IA AF +LG
Sbjct: 54 LSLILGWLLVFRTNTAYNRWWEARTLWGGLVNASRNLSLKFTKLGNFETRELRRVQQLLIAFPVALRCHLRSEKPAIGLRD--LDYEELETIHLPQGIAQEIY--SILGAAKRAGRIDGEEM-------RAIDVEALRLMDIAGGCERILKTRIVKSYRIFARQCVLIFLASLPWGIVQDFRFWTIPLTILTAYFMLGLEVVAEHVEEPFGYDEDDLDLDGLCQTIALSVNEAFLHLG 280
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: UPI001956416B (hypothetical protein n=1 Tax=Archangium primigenium TaxID=2792470 RepID=UPI001956416B) HSP 1 Score: 100 bits (248), Expect = 1.380e-19 Identity = 72/225 (32.00%), Postives = 110/225 (48.89%), Query Frame = 1
Query: 220 LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDT-QLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDA---AEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
LS L+VFRTN SY+R+WEGR LWG + L + + +++ D L R +++ + F YV +LRR +F G + A AEV ++P L + + V+ + ++GL T+ V +D V L ER+H T P + + L LLY LP D+ G+ + V Y+ G++ +EDPFG D++DL LDR I
Sbjct: 62 LSLLLVFRTNSSYDRFWEGRKLWGGIVNETRNLARASGIFLKDRPDLYRALVHWTAVFPYVSAAVLRRT-MFLGPAADALPAEQVAEVRAAQHVP-LAVARKMSAVLDEGRRQGLY-------TEYVQMQLDHNVQLLVDYLGGCERIHKTPMPFAYMLHLRRALLLYCFSLPFALVDSFGWMTVFATFVVTYVFFGIEEIGVEIEDPFGSDDNDLPLDRICDTI 277
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7R9YPW7_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPW7_DIALT) HSP 1 Score: 102 bits (253), Expect = 1.540e-19 Identity = 66/227 (29.07%), Postives = 117/227 (51.54%), Query Frame = 1
Query: 208 LQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVE--LINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
L T L L+VFRT +Y RWWEGR WG + L +QA +IDDT+LA+R++ ++I ++ +K+ LR E+ E+ V+ A +++ L +N L + + + +G +S + +D ++ L ER+++T P + L +F ++LL LP ++ L + + +TAY ++GL+ +E PFG + +DL LD + +
Sbjct: 153 LGTALFLLLVFRTEHAYERWWEGRRKWGDVIVFSRNLARQAGAYIDDTELAQRVIRLAIAYSAALKRHLRGERELT-ELAAVLSAEDIDGILASNHMTLHIACSISATIAAARAEGFINSIELIR-------LDESLTVLMDATGACERINSTKMPFAYIAHLRLFLAIWLLCLPFAMFEFLRWGAVPACAMTAYALVGLETTGVEIEGPFGHEFNDLPLDTYTDSV 371
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A554G7V1_9DELT (Uncharacterized protein n=2 Tax=Corallococcus TaxID=83461 RepID=A0A554G7V1_9DELT) HSP 1 Score: 99.8 bits (247), Expect = 2.120e-19 Identity = 68/217 (31.34%), Postives = 104/217 (47.93%), Query Frame = 1
Query: 220 LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVE--LINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLD 864
LS L+VFRTN SY+R+WEGR LWG + L + A V++ T L ++ + TF + LR ++ G ++ ++V+ L PL + T V+ + K+GL + V +D V L ER+H T P + V L +LY LP D G+ +L + AY+ G++ +EDPFG D++DL LD
Sbjct: 62 LSLLLVFRTNASYDRFWEGRKLWGGIVNETRNLLRAAEVFLGPTPLFAPLVRWTATFPFATAAWLRGQQRHLGSQADLLPPSDVQQTLAGQHVPLAVARRMTAVLDEGRKQGLYP-------EYVQMQLDQNVQLLIDYLGGCERIHKTPMPFAYMVHLRRALILYCFTLPFALVDTFGWVTVLATFLVAYVFFGIEEIGVEIEDPFGVDDNDLPLD 271
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A3L7SMM5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SMM5_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.440e-19 Identity = 70/226 (30.97%), Postives = 110/226 (48.67%), Query Frame = 1
Query: 214 TILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI-DDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGV--IDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
T L L+VFRTN SY+R+WEGR WG ++ C L +QA +W+ D +L R ++ +I F Y Q L + V D A+VE +LP L + T+ + ++GL DS Q D ++ L ER+H+T P + V L ++Y + LP+ G+ I L+T+Y++ G++ +EDPF R +DL + + I
Sbjct: 64 TALGLLLVFRTNSSYDRFWEGRKQWGAINNECRNLARQANIWLASDPKLMREVIRWTIAFPYATMQRLWSLPGLGVRLNDVSPADVAQVEASKHLP-LAISRLLTQRLFTACQQGLIDSRQLVA-------FDQNLTLLVDYCGACERIHSTPMPFAYAVHLRRVLIVYCMTLPLAFVKDFGWATIPATLLTSYILFGVEEIGVEIEDPFERTVNDLPIQSYCQGI 281
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7C2K2S6_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2K2S6_9PLAN) HSP 1 Score: 99.0 bits (245), Expect = 3.610e-19 Identity = 75/238 (31.51%), Postives = 112/238 (47.06%), Query Frame = 1
Query: 196 TGRSLQTI-LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI-DDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLP--PLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCR 897
TG +L + L L+VFRTN SY+R+WEGR +WG + L +QA+ W DD RRI+ ++ +AY LR + GE++ + +V + + PL + T + K+GL Q +D V L ER+H+T P + V L +LY LP G+ I L+ AY++ G++ +EDPFG D++DL LD I A R
Sbjct: 57 TGHALIGVALGLLLVFRTNASYDRFWEGRKMWGAIVNETRNLARQASEWCADDATRVRRIVLWTVAYAYSCLHRLRGQPAI-GEVQAELPPDQVATVLSARHVPLAVARRLTAELEAARKQGLLTDYQQVQ-------LDQNVQLLIDYLGACERIHSTPLPYAYAVHLRRALILYCFTLPFALASRFGWETIPTTLIIAYVLFGIEEIGVEIEDPFGTDDNDLPLDTICGNIEATLR 286
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7C4YVD7_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4YVD7_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 3.670e-19 Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query: 193 NTGRSLQTI-LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQ-AAVWIDDTQLARRIMNISITFAYVVKQILRREKLFA---GEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNG 927
+TG L + L L+VFRTN SY+R+WEGR LWG + L + AAV + + RR++ +I F Y +LR + GE+ D + L +N PL + +E + + G+ Q +D V L ER+H T P + V L ++Y LP G++ I +L+ +YLM G++ +EDPFGRD++DL L+RF I R S G
Sbjct: 52 STGHVLVGVSLGLLLVFRTNSSYDRFWEGRKLWGGIVNETRNLARATAAVMPNSPDVVRRVILWTIAFPYACMHLLRGSEGMGPTIGELPE--DQVALTLKSNHVPLAIARRISEELNAAREAGIISDIQQMT-------VDQNVQLLIDYIGACERIHKTPMPFAYMVHLRRAIIIYCFTLPFALVKDFGWWTIWAVLLVSYLMYGIEEIGVEIEDPFGRDDNDLPLERFCQGIEETLRGVLPSPSSGG 292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9367.20964.1 >prot_Ecto-sp13_S_contig9367.20964.1 ID=prot_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=651bp MPGGQGSSRVESASHAQQLYDFCAVFWRSTPHPFAQITMLLLSSALVATLback to top mRNA from alignment at Ecto-sp13_S_contig9367:1767..5661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9367.20964.1 ID=mRNA_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3895bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9367:1767..5661- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9367:1767..5661- >mRNA_Ecto-sp13_S_contig9367.20964.1 ID=mRNA_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1953bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9367:1767..5661- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |