mRNA_Ecto-sp13_S_contig9367.20964.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9367.20964.1
Unique NamemRNA_Ecto-sp13_S_contig9367.20964.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: D8LEB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB5_ECTSI)

HSP 1 Score: 1103 bits (2854), Expect = 0.000e+0
Identity = 582/650 (89.54%), Postives = 601/650 (92.46%), Query Frame = 1
Query:    1 MPGGQGSSRVESASHAQQLYDFCAVFWRSTPHPFAQITMLLLSSALVATLNDKRVLDAGLRLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDGSGASNSRPRRPPGDGGEPDPGAAAEKMGDGAVASGGRGGGDSDSADRSASTTLGWDATPILSSEKDNASALGVSPTVSRGGASFEKKSEVSFDRGGSLTPRMQRPPTTPASGHQISVTGAASTSLPQPFGLTPTSASVTQDEALGHAVGAAASRGDGQSPPSRQMVSQTPVAGMVSERQSFFYQSVGKNAAQFAIVSESRLEPEDDGPIETIDRPWHNSTRAASTCGDASAPVGQVADSNRGPSPGSSGRWPSPQSEGGGDVGVFFSPAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDIEEGAASRNKMAPSEAMSEFPEPRWF 1950
            M GGQGS RVESASHA+QL+DF AVFWRSTPHPFAQ+TMLLLSSALVATLND+RVLDAGL LSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNIS+TFAYVVKQILRRE+LFA EMEGVIDAAEVELINNLPPLVMPYYCTEVMRQC+KKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERV NT QPDCFRVMLHMFTLLYLLVLPVISYD LGYFV+LEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDG GA+NS+PRRPPGDG EPDPGAA EKMGDGAVA             +  STTLGWD TP+LSSEKD+ SALGVSPTVSRGGASFEKK EVSFDRGGSLTPRM RPPTT ASGHQISVTGAASTSLPQP G TPTSASV+QDEALGHAV AAASRG GQSPPSRQ  SQTPVAGMV ERQS FYQSVGKNAAQFAIVSES  EPEDDGPIET++RPWHNSTRAASTC D S PVGQVADSNR PSPGSSGRWPSPQSEGGGDVGV  S AVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVD+EEGAAS +KMAPSEA+SEFPEPRWF
Sbjct:    1 MSGGQGSFRVESASHARQLHDFFAVFWRSTPHPFAQMTMLLLSSALVATLNDERVLDAGLHLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISVTFAYVVKQILRREQLFADEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCIKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVRNTPQPDCFRVMLHMFTLLYLLVLPVISYDTLGYFVVLEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNGADLTLDGGGATNSKPRRPPGDGSEPDPGAAVEKMGDGAVAGXXXXXXXXXGGAKFISTTLGWDTTPVLSSEKDSTSALGVSPTVSRGGASFEKKGEVSFDRGGSLTPRMPRPPTTAASGHQISVTGAASTSLPQPSGPTPTSASVSQDEALGHAVDAAASRGGGQSPPSRQ--SQTPVAGMVPERQSSFYQSVGKNAAQFAIVSESCHEPEDDGPIETVERPWHNSTRAASTCRDTSTPVGQVADSNRDPSPGSSGRWPSPQSEGGGDVGVSVSSAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDMEEGAASGDKMAPSEAVSEFPEPRWF 648          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A6H5K5N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N9_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 4.440e-147
Identity = 237/278 (85.25%), Postives = 247/278 (88.85%), Query Frame = 1
Query: 1117 ATPILSSEKDNASALGVSPTVSRGGASFEKKSEVSFDRGGSLTPRMQRPPTTPASGHQISVTGAASTSLPQPFGLTPTSASVTQDEALGHAVGAAASRGDGQSPPSRQMVSQTPVAGMVSERQSFFYQSVGKNAAQFAIVSESRLEPEDDGPIETIDRPWHNSTRAASTCGDASAPVGQVADSNRGPSPGSSGRWPSPQSEGGGDVGVFFSPAVAGLMARNLSIKNQQLKEGPLPVRRGKPRPGRGKPPMVDIEEGAASRNKMAPSEAMSEFPEPRWF 1950
            ATPILSSEKD+ SALGVSPTVSRGGASFEKKS+VSFD GGSLTPRM RPPTTPASG QISVTGAASTSLPQPFG TPTSASV+QDEALGHAVGAAASRG  QSPPSRQMVSQTPVAGMVS+RQS FYQSVGKNAAQFAIVSES LEPEDDG IET++RPWHNSTRAAS CGDASAPVGQVADSNR PSPGSSGRWPSPQSEGGGDV VFFSPA               LKEGPLPV RGKPRPGRGKPP+VDIE+GAAS +KMAPSEAMS+ PEPRWF
Sbjct:   16 ATPILSSEKDSTSALGVSPTVSRGGASFEKKSDVSFDSGGSLTPRMPRPPTTPASGQQISVTGAASTSLPQPFGPTPTSASVSQDEALGHAVGAAASRGGRQSPPSRQMVSQTPVAGMVSKRQSSFYQSVGKNAAQFAIVSESCLEPEDDGSIETVERPWHNSTRAASMCGDASAPVGQVADSNRDPSPGSSGRWPSPQSEGGGDVWVFFSPA---------------LKEGPLPVLRGKPRPGRGKPPLVDIEDGAASGDKMAPSEAMSKIPEPRWF 278          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A8J5X7R2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7R2_DIALT)

HSP 1 Score: 104 bits (260), Expect = 2.980e-20
Identity = 95/312 (30.45%), Postives = 141/312 (45.19%), Query Frame = 1
Query:    7 GGQGSS-RVESASHAQQLYDFCAVFWRSTP-HPFAQITMLLLSSALVATLNDKRVLDAG---LRLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI------------DDTQLARRIMNI---SITFAYVVKQILRREKLFAGEMEGVI---DAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFV 873
            GG+G+   ++S+++        A+  R  P  P    T+  + +  +A L   RV D G   + L  N      T L FL+VFRTN SY+RWWEGR +WG +   C   T+Q    I             +   A R+  +   ++ FA V KQ LR E+  +  + G+I    A EV+   + P  V      E +    + GL DS +          +D  +S +      MER+  T  P  + V L  F +L+LL LP      L +  +L   + AY +LGL+     +E PFGRD  DL LD+ V
Sbjct:   28 GGEGNQIMLDSSTYGYWPESLFALHGRPLPLGPLLIYTLWAIGATTLAML--VRVGDDGEPTITLHVNVLGVSGTALFFLLVFRTNASYDRWWEGRKMWGDVTACCRNFTRQVIAHIGPEPRGALFAPASEPSAAERVDTLVRWAVAFAIVAKQHLRDERELSTTLRGIIRTTHAREVQAAKHRPLFVAERITME-LAAAQRAGLLDSVEKMA-------LDANLSAMVRAVTSMERIVRTRMPFAYIVHLRSFLVLWLLALPFTMVVYLNWGGVLACTLIAYSLLGLETIGVEVEQPFGRDYCDLPLDQLV 329          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A518G6P0_9BACT (Bestrophin, RFP-TM, chloride channel n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518G6P0_9BACT)

HSP 1 Score: 100 bits (248), Expect = 1.160e-19
Identity = 76/238 (31.93%), Postives = 115/238 (48.32%), Query Frame = 1
Query:  208 LQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQ-AAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAF-YLG 915
            L  IL +L+VFRTN +YNRWWE R LWG +  +   L+ +   +   +T+  RR+  + I F   ++  LR EK   G  +  +D  E+E I+    +    Y   ++    + G  D  +        R IDV   +L       ER+  T     +R+      L++L  LP        ++ I   ++TAY MLGL++ A+H+E+PFG DE DL LD     IA     AF +LG
Sbjct:   54 LSLILGWLLVFRTNTAYNRWWEARTLWGGLVNASRNLSLKFTKLGNFETRELRRVQQLLIAFPVALRCHLRSEKPAIGLRD--LDYEELETIHLPQGIAQEIY--SILGAAKRAGRIDGEEM-------RAIDVEALRLMDIAGGCERILKTRIVKSYRIFARQCVLIFLASLPWGIVQDFRFWTIPLTILTAYFMLGLEVVAEHVEEPFGYDEDDLDLDGLCQTIALSVNEAFLHLG 280          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: UPI001956416B (hypothetical protein n=1 Tax=Archangium primigenium TaxID=2792470 RepID=UPI001956416B)

HSP 1 Score: 100 bits (248), Expect = 1.380e-19
Identity = 72/225 (32.00%), Postives = 110/225 (48.89%), Query Frame = 1
Query:  220 LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDT-QLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDA---AEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
            LS L+VFRTN SY+R+WEGR LWG +      L + + +++ D   L R +++ +  F YV   +LRR  +F G     + A   AEV    ++P L +    + V+ +  ++GL        T+ V   +D  V  L       ER+H T  P  + + L    LLY   LP    D+ G+  +    V  Y+  G++     +EDPFG D++DL LDR    I
Sbjct:   62 LSLLLVFRTNSSYDRFWEGRKLWGGIVNETRNLARASGIFLKDRPDLYRALVHWTAVFPYVSAAVLRRT-MFLGPAADALPAEQVAEVRAAQHVP-LAVARKMSAVLDEGRRQGLY-------TEYVQMQLDHNVQLLVDYLGGCERIHKTPMPFAYMLHLRRALLLYCFSLPFALVDSFGWMTVFATFVVTYVFFGIEEIGVEIEDPFGSDDNDLPLDRICDTI 277          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7R9YPW7_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPW7_DIALT)

HSP 1 Score: 102 bits (253), Expect = 1.540e-19
Identity = 66/227 (29.07%), Postives = 117/227 (51.54%), Query Frame = 1
Query:  208 LQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVE--LINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
            L T L  L+VFRT  +Y RWWEGR  WG +      L +QA  +IDDT+LA+R++ ++I ++  +K+ LR E+    E+  V+ A +++  L +N   L +    +  +     +G  +S +          +D  ++ L       ER+++T  P  +   L +F  ++LL LP   ++ L +  +    +TAY ++GL+     +E PFG + +DL LD +   +
Sbjct:  153 LGTALFLLLVFRTEHAYERWWEGRRKWGDVIVFSRNLARQAGAYIDDTELAQRVIRLAIAYSAALKRHLRGERELT-ELAAVLSAEDIDGILASNHMTLHIACSISATIAAARAEGFINSIELIR-------LDESLTVLMDATGACERINSTKMPFAYIAHLRLFLAIWLLCLPFAMFEFLRWGAVPACAMTAYALVGLETTGVEIEGPFGHEFNDLPLDTYTDSV 371          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A554G7V1_9DELT (Uncharacterized protein n=2 Tax=Corallococcus TaxID=83461 RepID=A0A554G7V1_9DELT)

HSP 1 Score: 99.8 bits (247), Expect = 2.120e-19
Identity = 68/217 (31.34%), Postives = 104/217 (47.93%), Query Frame = 1
Query:  220 LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVE--LINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLD 864
            LS L+VFRTN SY+R+WEGR LWG +      L + A V++  T L   ++  + TF +     LR ++   G    ++  ++V+  L     PL +    T V+ +  K+GL         + V   +D  V  L       ER+H T  P  + V L    +LY   LP    D  G+  +L   + AY+  G++     +EDPFG D++DL LD
Sbjct:   62 LSLLLVFRTNASYDRFWEGRKLWGGIVNETRNLLRAAEVFLGPTPLFAPLVRWTATFPFATAAWLRGQQRHLGSQADLLPPSDVQQTLAGQHVPLAVARRMTAVLDEGRKQGLYP-------EYVQMQLDQNVQLLIDYLGGCERIHKTPMPFAYMVHLRRALILYCFTLPFALVDTFGWVTVLATFLVAYVFFGIEEIGVEIEDPFGVDDNDLPLD 271          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A3L7SMM5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SMM5_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.440e-19
Identity = 70/226 (30.97%), Postives = 110/226 (48.67%), Query Frame = 1
Query:  214 TILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI-DDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGV--IDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEI 882
            T L  L+VFRTN SY+R+WEGR  WG ++  C  L +QA +W+  D +L R ++  +I F Y   Q L         +  V   D A+VE   +LP L +    T+ +    ++GL DS Q           D  ++ L       ER+H+T  P  + V L    ++Y + LP+      G+  I   L+T+Y++ G++     +EDPF R  +DL +  +   I
Sbjct:   64 TALGLLLVFRTNSSYDRFWEGRKQWGAINNECRNLARQANIWLASDPKLMREVIRWTIAFPYATMQRLWSLPGLGVRLNDVSPADVAQVEASKHLP-LAISRLLTQRLFTACQQGLIDSRQLVA-------FDQNLTLLVDYCGACERIHSTPMPFAYAVHLRRVLIVYCMTLPLAFVKDFGWATIPATLLTSYILFGVEEIGVEIEDPFERTVNDLPIQSYCQGI 281          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7C2K2S6_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2K2S6_9PLAN)

HSP 1 Score: 99.0 bits (245), Expect = 3.610e-19
Identity = 75/238 (31.51%), Postives = 112/238 (47.06%), Query Frame = 1
Query:  196 TGRSLQTI-LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWI-DDTQLARRIMNISITFAYVVKQILRREKLFAGEMEGVIDAAEVELINNLP--PLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCR 897
            TG +L  + L  L+VFRTN SY+R+WEGR +WG +      L +QA+ W  DD    RRI+  ++ +AY     LR +    GE++  +   +V  + +    PL +    T  +    K+GL    Q          +D  V  L       ER+H+T  P  + V L    +LY   LP       G+  I   L+ AY++ G++     +EDPFG D++DL LD     I A  R
Sbjct:   57 TGHALIGVALGLLLVFRTNASYDRFWEGRKMWGAIVNETRNLARQASEWCADDATRVRRIVLWTVAYAYSCLHRLRGQPAI-GEVQAELPPDQVATVLSARHVPLAVARRLTAELEAARKQGLLTDYQQVQ-------LDQNVQLLIDYLGACERIHSTPLPYAYAVHLRRALILYCFTLPFALASRFGWETIPTTLIIAYVLFGIEEIGVEIEDPFGTDDNDLPLDTICGNIEATLR 286          
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Match: A0A7C4YVD7_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4YVD7_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 3.670e-19
Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query:  193 NTGRSLQTI-LSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQ-AAVWIDDTQLARRIMNISITFAYVVKQILRREKLFA---GEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALGYFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRAAFYLGSKNG 927
            +TG  L  + L  L+VFRTN SY+R+WEGR LWG +      L +  AAV  +   + RR++  +I F Y    +LR  +      GE+    D   + L +N  PL +    +E +    + G+    Q          +D  V  L       ER+H T  P  + V L    ++Y   LP       G++ I  +L+ +YLM G++     +EDPFGRD++DL L+RF   I    R      S  G
Sbjct:   52 STGHVLVGVSLGLLLVFRTNSSYDRFWEGRKLWGGIVNETRNLARATAAVMPNSPDVVRRVILWTIAFPYACMHLLRGSEGMGPTIGELPE--DQVALTLKSNHVPLAIARRISEELNAAREAGIISDIQQMT-------VDQNVQLLIDYIGACERIHKTPMPFAYMVHLRRAIIIYCFTLPFALVKDFGWWTIWAVLLVSYLMYGIEEIGVEIEDPFGRDDNDLPLERFCQGIEETLRGVLPSPSSGG 292          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9367.20964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEB5_ECTSI0.000e+089.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5N9_9PHAE4.440e-14785.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5X7R2_DIALT2.980e-2030.45Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A518G6P0_9BACT1.160e-1931.93Bestrophin, RFP-TM, chloride channel n=1 Tax=Aurel... [more]
UPI001956416B1.380e-1932.00hypothetical protein n=1 Tax=Archangium primigeniu... [more]
A0A7R9YPW7_DIALT1.540e-1929.07Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A554G7V1_9DELT2.120e-1931.34Uncharacterized protein n=2 Tax=Corallococcus TaxI... [more]
A0A3L7SMM5_9BACT2.440e-1930.97Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C2K2S6_9PLAN3.610e-1931.51Uncharacterized protein n=1 Tax=Schlesneria paludi... [more]
A0A7C4YVD7_9BACT3.670e-1930.80Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9367contigEcto-sp13_S_contig9367:1767..5661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1112.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LEB5
Model size1953
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Bestrophin, RFP-TM, chloride channel
EggNOG OGs2RXRZ@2759,COG3781@1
Ec32 ortholog descriptionBestrophin/UPF0187
Ec32 orthologEc-00_001620.1
Cds size1953
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9367.20964.1prot_Ecto-sp13_S_contig9367.20964.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9367 1767..5661 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464205.0203843-CDS-Ecto-sp13_S_contig9367:1766..28521681464205.0203843-CDS-Ecto-sp13_S_contig9367:1766..2852Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 1767..2852 -
1681464205.033953-CDS-Ecto-sp13_S_contig9367:3412..35101681464205.033953-CDS-Ecto-sp13_S_contig9367:3412..3510Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 3413..3510 -
1681464205.0447216-CDS-Ecto-sp13_S_contig9367:3680..39811681464205.0447216-CDS-Ecto-sp13_S_contig9367:3680..3981Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 3681..3981 -
1681464205.0559094-CDS-Ecto-sp13_S_contig9367:4528..46941681464205.0559094-CDS-Ecto-sp13_S_contig9367:4528..4694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 4529..4694 -
1681464205.0684345-CDS-Ecto-sp13_S_contig9367:4955..51491681464205.0684345-CDS-Ecto-sp13_S_contig9367:4955..5149Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 4956..5149 -
1681464205.082041-CDS-Ecto-sp13_S_contig9367:5553..56611681464205.082041-CDS-Ecto-sp13_S_contig9367:5553..5661Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9367 5554..5661 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9367.20964.1

>prot_Ecto-sp13_S_contig9367.20964.1 ID=prot_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=651bp
MPGGQGSSRVESASHAQQLYDFCAVFWRSTPHPFAQITMLLLSSALVATL
NDKRVLDAGLRLSSNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMH
WSCVELTQQAAVWIDDTQLARRIMNISITFAYVVKQILRREKLFAGEMEG
VIDAAEVELINNLPPLVMPYYCTEVMRQCMKKGLADSPQAFGTQAVARGI
DVPVSQLSVQFADMERVHNTLQPDCFRVMLHMFTLLYLLVLPVISYDALG
YFVILEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRFVAEIAAQCRA
AFYLGSKNGADLTLDGSGASNSRPRRPPGDGGEPDPGAAAEKMGDGAVAS
GGRGGGDSDSADRSASTTLGWDATPILSSEKDNASALGVSPTVSRGGASF
EKKSEVSFDRGGSLTPRMQRPPTTPASGHQISVTGAASTSLPQPFGLTPT
SASVTQDEALGHAVGAAASRGDGQSPPSRQMVSQTPVAGMVSERQSFFYQ
SVGKNAAQFAIVSESRLEPEDDGPIETIDRPWHNSTRAASTCGDASAPVG
QVADSNRGPSPGSSGRWPSPQSEGGGDVGVFFSPAVAGLMARNLSIKNQQ
LKEGPLPVRRGKPRPGRGKPPMVDIEEGAASRNKMAPSEAMSEFPEPRWF
*
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mRNA from alignment at Ecto-sp13_S_contig9367:1767..5661-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9367.20964.1 ID=mRNA_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3895bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9367:1767..5661- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCGGCGGCCAGGGTTCCTCCCGGGTGGAGAGCGCTAGCCACGCCCA GCAGCTCTACGATTTCTGCGCCGTCTTCTGGCGGTCTACGCCACACCCGT TCGCCCAGGTATATCATAGCAAGCAGTGGAATCTACCGTTGCCGTTGATT GGGCCTTAAACAAACGGAGATCTGTGTCGTCGCATAAGGCTTGCTCGACA GTGTGCGATTATTGCACTTACTAACTTTCATTCTGCAGCGAAAGTGCTCA GTGACAAGGCGTTACAAGTGGTGAAAAATTAAACTAAATGTCGACCAGGA CCAGTCCGAAATACGCAGAAACGCACACAGGTGACCCGCAATACATGCAT GTGCAATCAGCACTCATCATCAGCATTAGCACGGATAGAGCCTTTTTTTT TTCGTTGCTATTAGGAAACGAAGTATTCAGCTACTTGAATAAGCTGTCGC GTGCTGAAGGAGACCCTCTTATCCACCTGCATGCGCACGTGAATGCTCCA AAATCTACCTAGATTACGATGCTACTGCTGTCGTCAGCGCTGGTGGCGAC CCTGAATGACAAGAGGGTGCTAGACGCGGGGCTCCGCCTTAGTTCGAACA CCGGCCGAAGTCTGCAAACAATCCTGTCCTTCCTGATCGTTTTCCGCACA AATCAATCGTACAACCGGTGGTGGGAGGGACGAATATTGTGGGGCAAGAT GCACTGGTGAGTGGTCGCGTACGTAAAGTTAGCTGGCTGCGGGAGGACGT TCCCTGTTCAAGCGCGCGGTGGGACGTGTGCCACGGGCGACGGAAAGATG TATTGTAGGCATGTGGTAACTGATGTACGACTGTTTCAACAGTTACAGCG TGTTGACTGAGAGGTTTGGAACAAGAAGCCAACAAGCCGTGACCCATAGG CATTTCTGATTATGATTTTCCGTGTCGCTTGTAATCGTCTGCAATGGGTG TGCGGTCGGGGGGAAAGGTCGTGCGTGGAGTTGACACAACAGGCGGCCGT ATGGATTGACGACACGCAGCTTGCCCGGCGCATCATGAACATCTCGATAA CGTTTGCCTACGTTGTGAAGCAAATACTGAGGCGGGAGAAGCTTTTTGCC GGCGAAATGGAAGGGGTCATTGATGCAGCTGAGGTAAGATGCGTACACTA GTATGGCCACGAAGATGCTGGAATTTGTGCTGTTGCTGGTGTTGTTGTTT TTTGTTGCTTTTTTATCGTCATAAAAAACGCGGTGAGCTTTCTACTGGCG TGTGCTCTTAGGTGGTTCAGGGGTGGAGACATTGATTTGTGCTTTCGCCC AAAATCGGCACTAACCATACATGAATACTGGCAGTGGCGGGGCTGGTGTG TCTTCTCATACAGCCAGTGTTAGCAGGGATACGAGCGATCTCGTTGTCGG TGGGCGCATTCACGTCGTGTGTACCGCTGCAACGTGCGGCTAGTCGAGTT TCCCGGGGCAGCGCGCGGCTGCAAGATAGCATCTACCGTCAGATCCAAGG CGCTCCGGCGTGTCCAGGTTCTCTCGCAGGCGTTTCCAGGTCGGGCAGGA ATGACACTCGTGATGATCCCGTAGAAAAGGCACGGCTTACGCGTTGTGGG TGAGGAGAAGAACCGGACAGAGCTCGGCTTTTCTCACGATCCTTCCTCTA CCCGTCCCCGTCCCCCCCCGACAAGGGCAGGTCGAGCTGATCAACAACCT CCCGCCTCTGGTGATGCCTTACTACTGCACGGAAGTAATGAGGCAGTGCA TGAAGAAGGGGCTGGCCGACAGCCCACAGGCATTCGGGACGCAGGCGGTT GCCCGGGGGATAGACGTACCCGTGTCGCAGCTATCGGTGCAGTTCGCCGA CATGGAGCGGGTCCACAACACGCTCCAGCCGGACTGCTTCAGGGTGATGC TCCACATGTTCACCTTGCTCTACCTGCTGGTGCTCCCGGTGATTTCGTAC GACGCGCTTGGCTATTTCGTCATCCTTGAAAGTAAGTGGTGATCGGGCAC AGCGTTAGCGGTGGCGGGGGTCGACACACAGGCTCCGCGTGATCCCAGTC ACCGCCACGTGTTTCGCACGATGTTCATCTCAACCTTATCATTCTTCCCG ACCAATCAAGTGCTAAAGGCTCCACGCCACCTCCTCCCTCGTGCCATGCA GTGCTGGTGACGGCCTACTTGATGCTGGGGCTGCAGATCGCTGCGGACCA CCTGGAAGACCCCTTCGGGCGCGACGAATCTGATCTACAGCTAGACCGGG TGTGTGTGCTGACGTTGAACTATGCAGAGCTTGCTTGCTCCGAACTTGTT GTTGTTGTTGTTGTTGGTGGTGGTGGTGTGATTTTGTCTTTTTTGTTGTT GTTGTCTTTGGTTGGGCTGGTTTTGTTGCCGTCACATTATGAACCATTCT ACCTCATCTGTCGCTTCTCTGCCCGGGCAGGAGATTATTTGGTGTAACAA TAGGCTTTTCCCAGAACAAGGGTCGAGTAGGATTTCCATGGCCCAGTTGC ACCGCCCTCGACGAGTCAAGCGACCTTTGTCGCAGCGGGACACGAAGTAA GGCAGCCCGAGAGTAGCCTAGAGTCGATCGCTCAGCTTCGATGCTGACAG CGAAACAATACATCTACACCAGAAGAGCATCACTGCGCGGCAGTGACATT CTCCTTTCCGGCCGTATCACGGTCGGTGGCTGTTCGTTACTCGCTGCTTT TCCCATGTACTAAGCTTCCCCGCGTTCTGCCGATATTGACGCTCAACTAC ATCGTCCTGCGCGTGCCCTCGCTAAACCCTATCAATCCTACCGGGACGCG CAACACCAGTTTGTTGCCGAAATCGCCGCGCAGTGCCGCGCGGCCTTCTA CCTCGGCAGTAAGAATGGTGCGGACCTCACGCTTGACGGAAGCGGTGCGA GCAACAGCAGGCCTCGACGACCTCCCGGTGACGGTGGTGAGCCCGATCCC GGAGCAGCCGCGGAGAAGATGGGCGATGGAGCTGTAGCAAGCGGTGGCCG CGGCGGCGGCGACAGTGACAGTGCCGATAGGTCCGCAAGCACTACATTGG GGTGGGACGCCACGCCCATTCTTTCGAGTGAAAAGGACAACGCGAGTGCG CTCGGCGTCTCGCCGACGGTTTCACGAGGCGGCGCTAGCTTCGAAAAAAA GAGTGAGGTCTCGTTCGACAGGGGAGGAAGCCTCACTCCCCGCATGCAGC GACCACCGACCACCCCGGCGTCCGGTCACCAGATTTCCGTGACCGGAGCT GCGTCGACCTCCCTTCCTCAGCCTTTTGGTCTGACGCCGACCAGTGCTTC GGTTACCCAAGATGAGGCGTTGGGCCACGCCGTAGGCGCCGCCGCGTCCC GCGGGGACGGGCAGAGTCCACCCTCTCGCCAAATGGTCAGCCAGACACCG GTGGCGGGGATGGTGTCCGAGCGGCAATCATTTTTTTACCAGAGCGTCGG CAAGAACGCGGCGCAATTCGCGATCGTCTCGGAGTCTCGCCTAGAGCCCG AAGACGACGGGCCGATCGAAACCATCGACAGGCCTTGGCACAACTCGACG CGGGCTGCCTCGACGTGCGGGGACGCGTCTGCGCCTGTCGGACAGGTCGC AGATTCAAATCGGGGCCCTTCTCCGGGAAGTTCTGGGCGATGGCCCTCCC CGCAGTCGGAGGGCGGCGGGGACGTCGGGGTGTTCTTTTCTCCGGCGGTG GCGGGCTTGATGGCCAGGAACCTCTCGATCAAGAACCAGCAGCTGAAGGA GGGCCCGTTGCCGGTACGAAGAGGCAAGCCTCGCCCGGGCAGAGGAAAAC CTCCCATGGTCGACATCGAGGAGGGGGCGGCGTCGAGGAACAAGATGGCG CCCTCAGAAGCAATGAGTGAATTTCCCGAGCCTAGATGGTTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9367:1767..5661-

>mRNA_Ecto-sp13_S_contig9367.20964.1 ID=mRNA_Ecto-sp13_S_contig9367.20964.1|Name=mRNA_Ecto-sp13_S_contig9367.20964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1953bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9367:1767..5661- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCGGCGGCCAGGGTTCCTCCCGGGTGGAGAGCGCTAGCCACGCCCA
GCAGCTCTACGATTTCTGCGCCGTCTTCTGGCGGTCTACGCCACACCCGT
TCGCCCAGATTACGATGCTACTGCTGTCGTCAGCGCTGGTGGCGACCCTG
AATGACAAGAGGGTGCTAGACGCGGGGCTCCGCCTTAGTTCGAACACCGG
CCGAAGTCTGCAAACAATCCTGTCCTTCCTGATCGTTTTCCGCACAAATC
AATCGTACAACCGGTGGTGGGAGGGACGAATATTGTGGGGCAAGATGCAC
TGGTCGTGCGTGGAGTTGACACAACAGGCGGCCGTATGGATTGACGACAC
GCAGCTTGCCCGGCGCATCATGAACATCTCGATAACGTTTGCCTACGTTG
TGAAGCAAATACTGAGGCGGGAGAAGCTTTTTGCCGGCGAAATGGAAGGG
GTCATTGATGCAGCTGAGGTCGAGCTGATCAACAACCTCCCGCCTCTGGT
GATGCCTTACTACTGCACGGAAGTAATGAGGCAGTGCATGAAGAAGGGGC
TGGCCGACAGCCCACAGGCATTCGGGACGCAGGCGGTTGCCCGGGGGATA
GACGTACCCGTGTCGCAGCTATCGGTGCAGTTCGCCGACATGGAGCGGGT
CCACAACACGCTCCAGCCGGACTGCTTCAGGGTGATGCTCCACATGTTCA
CCTTGCTCTACCTGCTGGTGCTCCCGGTGATTTCGTACGACGCGCTTGGC
TATTTCGTCATCCTTGAAATGCTGGTGACGGCCTACTTGATGCTGGGGCT
GCAGATCGCTGCGGACCACCTGGAAGACCCCTTCGGGCGCGACGAATCTG
ATCTACAGCTAGACCGGTTTGTTGCCGAAATCGCCGCGCAGTGCCGCGCG
GCCTTCTACCTCGGCAGTAAGAATGGTGCGGACCTCACGCTTGACGGAAG
CGGTGCGAGCAACAGCAGGCCTCGACGACCTCCCGGTGACGGTGGTGAGC
CCGATCCCGGAGCAGCCGCGGAGAAGATGGGCGATGGAGCTGTAGCAAGC
GGTGGCCGCGGCGGCGGCGACAGTGACAGTGCCGATAGGTCCGCAAGCAC
TACATTGGGGTGGGACGCCACGCCCATTCTTTCGAGTGAAAAGGACAACG
CGAGTGCGCTCGGCGTCTCGCCGACGGTTTCACGAGGCGGCGCTAGCTTC
GAAAAAAAGAGTGAGGTCTCGTTCGACAGGGGAGGAAGCCTCACTCCCCG
CATGCAGCGACCACCGACCACCCCGGCGTCCGGTCACCAGATTTCCGTGA
CCGGAGCTGCGTCGACCTCCCTTCCTCAGCCTTTTGGTCTGACGCCGACC
AGTGCTTCGGTTACCCAAGATGAGGCGTTGGGCCACGCCGTAGGCGCCGC
CGCGTCCCGCGGGGACGGGCAGAGTCCACCCTCTCGCCAAATGGTCAGCC
AGACACCGGTGGCGGGGATGGTGTCCGAGCGGCAATCATTTTTTTACCAG
AGCGTCGGCAAGAACGCGGCGCAATTCGCGATCGTCTCGGAGTCTCGCCT
AGAGCCCGAAGACGACGGGCCGATCGAAACCATCGACAGGCCTTGGCACA
ACTCGACGCGGGCTGCCTCGACGTGCGGGGACGCGTCTGCGCCTGTCGGA
CAGGTCGCAGATTCAAATCGGGGCCCTTCTCCGGGAAGTTCTGGGCGATG
GCCCTCCCCGCAGTCGGAGGGCGGCGGGGACGTCGGGGTGTTCTTTTCTC
CGGCGGTGGCGGGCTTGATGGCCAGGAACCTCTCGATCAAGAACCAGCAG
CTGAAGGAGGGCCCGTTGCCGGTACGAAGAGGCAAGCCTCGCCCGGGCAG
AGGAAAACCTCCCATGGTCGACATCGAGGAGGGGGCGGCGTCGAGGAACA
AGATGGCGCCCTCAGAAGCAATGAGTGAATTTCCCGAGCCTAGATGGTTC
TAG
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