mRNA_Ecto-sp13_S_contig9341.20942.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9341.20942.1
Unique NamemRNA_Ecto-sp13_S_contig9341.20942.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI)

HSP 1 Score: 1620 bits (4195), Expect = 0.000e+0
Identity = 910/1080 (84.26%), Postives = 936/1080 (86.67%), Query Frame = 1 
Query:  184 MTDKQRAAWETERALVWLQLGRVEEAVVGLKSALGWDAGDLQVLQPLGAALVAQGSVAEGFRFLREAAELQKSRIATVFEQVVRNQGLDPSILETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPPVQDPPEPARRRGDHTPTTTSSGG---DFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRSGL----ADSRRSPAGGGGTGDGDKDEGVPPGGVSGEVDGDAWRKPGLAGRSAGKGLDENGGDDADGVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPLVADAWLGDDELQTPRDSAREGKVLDDEEEDDFLFWERPAGPDGSANDGGMKHRGVRRGSDATANDGGGG---NGRRRNNAWQGRRDPPRSFAFPEPPTRDFAGAPLDPCDDDGNGEEPRNAFQCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--INLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLEQQALLDEQEE-GGDANGVDGGWWPEEDRERGDDSVATENQHGQHFPHG-DVDMSARIHQRAGSRAARDDAQNGAKKSPARLRKEEILRRHVTGPGRLIIGGEEVDVGYSNGXXXXXXXXXXXKDFDGGATYXXXXXXXXXXQGVYEDGLFVDEYGRVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXVYEGVLYDDDDVEGDGGGVYYFRNGEMPLGDDGGFADDYYFQEHY-DGDDRGCGRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLAMLADASEMRRR 3378
            MTD+QRAAWETERALVWLQLGRV EAVVGLKSALGWDAGDL+VLQPLGAALVAQGSVAEGFR+LREAAELQKSRIATVFEQ+VRNQGLDPS+LETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQ IYRIRSALSIPTVASSEQDLALAMA LEGWLRRQEP                           DFETPLS+CSFGALNYPDVAFDSLPLLAFADHRYPRRNR G     AD RRSPAGGGG    DKDEGVPP GVSGEVDGDAWRKPGLAGRSA KGLDENG DDAD +SLYG IGRLF RLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGI SIDYYVVPEPLVADAWLGDDELQ  RDS  EG+ +DDEEEDDFLFWERPAGPDGS +DGGMKHRGVR GSDATA+DGGGG   +GR RN+AWQGRRDPPRSF FPEPPTRD+AG PLDP DDDGNGEEPRNAF+CRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXX                                    XXXXXX  +NLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALL++QALLDEQEE GGDANG +GGWWPEE RERGDDSVAT+NQHGQH+P+G DV+ SARIHQ A SRAARDDAQNGA KSPAR R+EEILRRHV GPGRLIIGGEEVDVGYSNG             F G  TY          QGVYEDGLFVDEYGRVFD XXXXXXXXXXXXXXXXXXXXXXXXX VYEGVLYDDDDVEGDGGGVY+FRNG+ PLGDDGGFADD YFQEHY DG DRGC RSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLA LADASEMRRR
Sbjct:    1 MTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFRYLREAAELQKSRIATVFEQIVRNQGLDPSVLETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQ-IYRIRSALSIPTVASSEQDLALAMAALEGWLRRQEPXXXXXXXXXXXXXXXXXXXXXXXXXXXDFETPLSTCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGFEAVDADYRRSPAGGGG----DKDEGVPPRGVSGEVDGDAWRKPGLAGRSAWKGLDENGEDDADRMSLYGPIGRLFGRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDELQKARDSTCEGEAIDDEEEDDFLFWERPAGPDGSGSDGGMKHRGVRHGSDATASDGGGGGGVSGRHRNDAWQGRRDPPRSFVFPEPPTRDYAGPPLDPFDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXVEAGGGRAGSAGRSGMRLKVGMAAAAEMEGAEEDYDXXXXXXXXMNLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLDEQALLDEQEEEGGDANGDEGGWWPEEGRERGDDSVATKNQHGQHYPYGGDVERSARIHQHARSRAARDDAQNGAAKSPARSRQEEILRRHVIGPGRLIIGGEEVDVGYSNGGGGDGDNI-----FGGRGTYADDFDEDDDDQGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXGVYEGVLYDDDDVEGDGGGVYFFRNGDKPLGDDGGFADDDYFQEHYYDGGDRGCDRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRR 1070
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE)

HSP 1 Score: 1595 bits (4130), Expect = 0.000e+0
Identity = 927/1134 (81.75%), Postives = 959/1134 (84.57%), Query Frame = 1 
Query:    1 LLGVSIEGTSGLAAPAGEEDLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGAVGLTMTDKQRAAWETERALVWLQLGRVEEAVVGLKSALGWDAGDLQVLQPLGAALVAQGSVAEGFRFLREAAELQKSRIATVFEQVVRNQGLDPSILETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPPVQDPPEPARRRGDHTPTTTSSGGDFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRSGL----ADSRRSPAGGGGTGDGDKDEGVPPGGVSGEVDGDAWRKPGLAGRSAGKGLDENGGDDADGVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPLVADAWLGDDELQTPRDSAREGKVLDDEEEDDFLFWERPAGPDGSANDGGMKHRGVRRGSDATANDGGGGNGRRRNNAWQGRRDPPRSFAFPEPPTRDFAGAPLDPCDDDGNGEEPRNAFQCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---INLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLEQQALLDEQEEGGDANGVDGGWWPEEDRERGDDSVATENQHGQHFPHG-DVDMSARIHQRAGSRAARDDAQNGAKKSPARLRKEEILRRHVTGPGRLIIGGEEVDVGYSNGXXXXXXXXXXXKDFDGGATYXXXXXXXXXXQGVYEDGLFVDEYGRVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXVYEGVLYDDDDVEGDGGGVYYFRNGEMPLGDDGGFADDYYFQEHYDGDDRGCGRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLAMLADASEMRRR 3378
            LLGVSIEGTSGLAAPAG+ DLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGA GLTMTD+QRAAWETERALVWLQLGRV EAVVGLKSALGWDAGDL+VLQPLGAALVAQGSVAEGF +LREAAELQKSRIATVFEQ+VRNQGLDPSILETKNRK      RNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQ IYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEP V+DPP+PAR             GDFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNR GL    A SRRSP GGGGTGDGDKDEGVPP GVSGEVDGDAWR PGL GRSAGKGLDENGGDDAD +SLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFE                                                                       IALWGHAPTLGI SIDYYVVPEPLVADAWLGDDELQT RDS  EG+VLDDEEEDDFLFWERPAGPDGS NDGGMKHRGVR GSDATANDGGGG+GRRRN+AWQGRRDPPRSF FPEPPTRDF   PLDPCDDDGNGEE RNAF+ RNGLPPRAGGSGPATGAVDPEKKVG+TSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXX   INLYGIFTDDGDLV+YESLVATLK RGKGRE+LERIVSALL++QALLDEQE+GGDAN  +GGWWPEEDR+RGDDSVATENQHGQH+P+G DV+MSARIHQRA SRAARDDAQ+GAKKSPARLR+E+ILRRHV GPGR IIGGEEVDVG+SNG             F GGA Y          QG+YEDGLFVDEYGRVFDG XXXXXXXXXXXXXXXXXXXXXXXX VYEGVLYDDDDVEGDGGGVY+FRNG+ PLGDDGGFADD YFQ +YDGDDRGC RSSGDWPRPWAG DYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLA LADASE+RRR
Sbjct:  190 LLGVSIEGTSGLAAPAGKADLNGSERGNVGFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFHYLREAAELQKSRIATVFEQIVRNQGLDPSILETKNRK------RNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQ-IYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPLVEDPPQPARXXXXXXXXXXXXXGDFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDAGSRRSPEGGGGTGDGDKDEGVPPRGVSGEVDGDAWRMPGLVGRSAGKGLDENGGDDADRLSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFE-----------------------------------------------------------------------IALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDELQTARDSTCEGEVLDDEEEDDFLFWERPAGPDGSGNDGGMKHRGVRHGSDATANDGGGGSGRRRNDAWQGRRDPPRSFGFPEPPTRDFGPPPLDPCDDDGNGEERRNAFRGRNGLPPRAGGSGPATGAVDPEKKVGETSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAEMEGGEDDYXXXXXXXXXXXXINLYGIFTDDGDLVDYESLVATLKARGKGREKLERIVSALLDEQALLDEQEQGGDANEGEGGWWPEEDRQRGDDSVATENQHGQHYPNGGDVEMSARIHQRARSRAARDDAQDGAKKSPARLRQEDILRRHVIGPGRSIIGGEEVDVGHSNGDGSGDDGD---NTFGGGAAYAGDFDEDDDDQGMYEDGLFVDEYGRVFDGEXXXXXXXXXXXXXXXXXXXXXXXXGVYEGVLYDDDDVEGDGGGVYFFRNGDKPLGDDGGFADDDYFQGYYDGDDRGCDRSSGDWPRPWAGFDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEIRRR 1242
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A7V2AL82_9PROT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AL82_9PROT)

HSP 1 Score: 86.3 bits (212), Expect = 1.730e-13
Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 1 
Query: 1210 VSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPLVADAWLGDD 1767
            V +   I  ++ +LCP L      W      A    PE++     E   + R+ F+S  F NH   K     +    R  F+VI+  + T S D +    +     +  +L  N  A+ + +AH R D++ + D   DA TY+LA+ R+APVQ+  WGH  + GI ++DYYV    L  D   GDD
Sbjct:  300 VPVVCKITEMYAKLCPRL-----TWT-----ADHCQPESEA----ERSEKYRIGFLSHHFHNHTIGKLNRGFIEHFDRNRFDVIV--FRTGSIDDSGSQAIEKAADKVVHLPENLDAAQRLVAHERLDLLFYPDTGMDAFTYYLAYARLAPVQVTSWGHPISTGIANMDYYVSSHDLETDR--GDD 467
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A1F4FCC4_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FCC4_9PROT)

HSP 1 Score: 80.9 bits (198), Expect = 9.980e-12
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 1 
Query: 1210 VSLYGSIGR-LFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYV 1725
            ++ +G   R L  +LC    +   P LD       +AP  D   R E   R+RV FVS+   +H      AA ++ L  + FEVI+ S   P D  + +  +         L  N   + +++A +R DV+V+ D   +  +YF+AF R+A VQI L+GH  T GI++ID+++
Sbjct:  367 LAYHGRNNRALLEKLCASFRS-ACPALDL------VAPHCDAPFRSE---RIRVGFVSNHLHSHTVGLYFAAFIQALDARQFEVIIFSQDGPEDSVSRD--IRRHAGEHVRLGRNFETAREQIAGKRLDVLVYPDIGMEPMSYFMAFARLARVQICLYGHPETTGIDTIDFFL 527
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A537BZP4_9PROT (Uncharacterized protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BZP4_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 1.120e-11
Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1 
Query: 1357 RVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPL 1740
            R+R+ FVS+ F  H+  +    L+R LPR  FEV + +    +DD  E   +  +  R   L  +       +     D+V FAD      TYFLAF R+AP+Q+  WGH+ T GI++IDYY+  + +
Sbjct:  290 RLRIGFVSTYFHAHSVGRTTFGLIRDLPRDRFEVHVFAIAAQADDLAE--AIRKSADRYVPLPLDLGRVRDAIDSAALDIVFFADIGMHPLTYFLAFWRLAPIQMVTWGHSVTSGIDTIDYYLSSDAI 415
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A7U7B1D7_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium LM-1 TaxID=2682548 RepID=A0A7U7B1D7_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 1.410e-11
Identity = 56/180 (31.11%), Postives = 85/180 (47.22%), Query Frame = 1 
Query: 1204 DGVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGN-HATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPL 1740
            D   L  ++GR F + C DL A+ AP L            ADG  R +   R+R+  +S+     H   K  A ++  LPR  FE+++  +   S + T E        R   L       LQ++   R D++ + D      TYF+AF R+APVQ+  WGH  T GI ++DY++  + L
Sbjct:  450 DDRPLQEALGRYFVKACKDL-AWTAPHL------------ADG-KRPQPRKRIRLGVLSAFLEPIHTIGKLFAGVLTNLPRDRFELVVFRFYHQSPNMTRE--FDGKADRVVRLPLRPGEQLQRIGAERLDILFYPDIGMSYHTYFMAFARLAPVQLVAWGHPDTTGIPNMDYFISTDYL 613
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A1F4HF00_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14 TaxID=1797502 RepID=A0A1F4HF00_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 1.420e-11
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1 
Query: 1357 RVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPL 1740
            R RV FVS+ F  H+  +     +R LPR+HFEV + S     +D   E +  + +   A +     A+   L     D +VFAD      TY+LA+ R+APVQ+A WGH  T GI++IDY++  + L
Sbjct:  268 RRRVGFVSTYFQQHSIARTTVGWIRDLPREHFEVYVVSIAPGVNDPRAEEIRRAADHYLA-VPATLGAARSALLAAELDYLVFADIGMHPLTYYLAYCRLAPVQLAAWGHPVTTGIDTIDYFISAQSL 394
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A1Q3MR25_9BACT (Glyco_transf_41 domain-containing protein n=1 Tax=Armatimonadetes bacterium 55-13 TaxID=1895717 RepID=A0A1Q3MR25_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 3.880e-11
Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 1 
Query: 1234 RLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPL 1740
              + R CPDL A++AP      G ++               + RV   S+    H   K    L+  L     EV+     + +DDWT+E + G+   RS  L  +  AS Q +A ++ DV+ + D   D  TY+LAF R+APVQ+  WGH  +  +  +DY++  + L
Sbjct:  380 EAYQRSCPDL-AWIAPHCCEVKGRNA---------------KTRVGVCSANLNRHTIGKLFRRLIIGLRSDDIEVVFFDASSRTDDWTKEVIDGA--DRSYLLTGDLFASRQLIADQKLDVLFYPDLGMDKLTYYLAFSRLAPVQMTTWGHPSSTALPYMDYFLSSDDL 530
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A2E5MWA3_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E5MWA3_9PROT)

HSP 1 Score: 75.1 bits (183), Expect = 5.830e-10
Identity = 55/184 (29.89%), Postives = 84/184 (45.65%), Query Frame = 1 
Query: 1210 VSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEADGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQK----LAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPEPLVAD 1749
            + L   I +++   CP L AF A             P+       +  G+ RV F+S  F +H   K     +  L R+ FEVIL       D       L  T   +A+ V +   +L+     ++ ++ D++ + D   D+ TYFLAF R+APVQ+  WGH  + GI +IDY+V    L  D
Sbjct:  329 IKLSKKIAQVYLEKCPSL-AFEAK--------KHTIPQ-------KGFGKYRVGFLSHHFYDHTIGKLYRGFIEHLDRKLFEVILFRTSKRKD------ALAITIEENADQVVHLRTNLKSAQLAVSSKKLDLLFYPDIGMDSFTYFLAFSRLAPVQVTSWGHPNSTGIPNIDYFVSSRDLEVD 490
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Match: A0A7C1Y4R6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1Y4R6_9GAMM)

HSP 1 Score: 74.7 bits (182), Expect = 6.460e-10
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 1 
Query: 1354 GRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDD-----W--TEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGINSIDYYVVPE 1734
            GR+RV F+S  F +H+  +    ++  + R  FEVI      P D      W  ++ H++ + +S    L   R     ++     DV+++ D      TYFLA+ R+APVQI  WGH+ T GI +IDY++  E
Sbjct:  229 GRLRVGFISEYFMDHSVARDRGGIIAHISRDKFEVITIFLQKPRDTLGRYIWNHSDRHLMLTEKSNYDYLDVWRN----QIEELELDVLIYCDIGMSVDTYFLAYSRLAPVQITTWGHSDTSGIGTIDYFISSE 358
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9341.20942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX0_ECTSI0.000e+084.26TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPP0_9PHAE0.000e+081.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7V2AL82_9PROT1.730e-1331.18Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A1F4FCC4_9PROT9.980e-1231.79Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A537BZP4_9PROT1.120e-1135.16Uncharacterized protein n=2 Tax=Betaproteobacteria... [more]
A0A7U7B1D7_9PROT1.410e-1131.11Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A1F4HF00_9PROT1.420e-1136.72Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A1Q3MR25_9BACT3.880e-1130.18Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A2E5MWA3_9PROT5.830e-1029.89Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A7C1Y4R6_9GAMM6.460e-1032.84Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9341contigEcto-sp13_S_contig9341:474..6019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score84.7
Seed ortholog evalue3e-13
Seed eggNOG ortholog42099.EPrPV00000017090
Model size3381
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGs1MF10@121069,COG3914@1,KOG4626@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-27_006140.1
Cds size3381
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9341.20942.1prot_Ecto-sp13_S_contig9341.20942.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9341 474..6019 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464203.212491-CDS-Ecto-sp13_S_contig9341:473..8341681464203.212491-CDS-Ecto-sp13_S_contig9341:473..834Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 474..834 +
1681464203.2234368-CDS-Ecto-sp13_S_contig9341:1232..13511681464203.2234368-CDS-Ecto-sp13_S_contig9341:1232..1351Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 1233..1351 +
1681464203.2327702-CDS-Ecto-sp13_S_contig9341:1818..19621681464203.2327702-CDS-Ecto-sp13_S_contig9341:1818..1962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 1819..1962 +
1681464203.2421296-CDS-Ecto-sp13_S_contig9341:2207..23031681464203.2421296-CDS-Ecto-sp13_S_contig9341:2207..2303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 2208..2303 +
1681464203.251752-CDS-Ecto-sp13_S_contig9341:2660..33951681464203.251752-CDS-Ecto-sp13_S_contig9341:2660..3395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 2661..3395 +
1681464203.268933-CDS-Ecto-sp13_S_contig9341:3683..38961681464203.268933-CDS-Ecto-sp13_S_contig9341:3683..3896Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 3684..3896 +
1681464203.278009-CDS-Ecto-sp13_S_contig9341:4306..60191681464203.278009-CDS-Ecto-sp13_S_contig9341:4306..6019Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9341 4307..6019 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9341.20942.1

>prot_Ecto-sp13_S_contig9341.20942.1 ID=prot_Ecto-sp13_S_contig9341.20942.1|Name=mRNA_Ecto-sp13_S_contig9341.20942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1127bp
LLGVSIEGTSGLAAPAGEEDLNGSERGNVGFELTVIFSSVLRAARLPSVA
LDALHGAVGLTMTDKQRAAWETERALVWLQLGRVEEAVVGLKSALGWDAG
DLQVLQPLGAALVAQGSVAEGFRFLREAAELQKSRIATVFEQVVRNQGLD
PSILETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLR
RHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQQIYRIRSALS
IPTVASSEQDLALAMATLEGWLRRQEPPVQDPPEPARRRGDHTPTTTSSG
GDFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRSGLADSRRSP
AGGGGTGDGDKDEGVPPGGVSGEVDGDAWRKPGLAGRSAGKGLDENGGDD
ADGVSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEA
DGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTE
EHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFG
RVAPVQIALWGHAPTLGINSIDYYVVPEPLVADAWLGDDELQTPRDSARE
GKVLDDEEEDDFLFWERPAGPDGSANDGGMKHRGVRRGSDATANDGGGGN
GRRRNNAWQGRRDPPRSFAFPEPPTRDFAGAPLDPCDDDGNGEEPRNAFQ
CRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAAAAAAAGPGPGVEAGGGR
AGSAGRSDMRLKMGMAAAAEMEGAEEDYDDDDDDDDDDINLYGIFTDDGD
LVEYESLVATLKERGKGREELERIVSALLEQQALLDEQEEGGDANGVDGG
WWPEEDRERGDDSVATENQHGQHFPHGDVDMSARIHQRAGSRAARDDAQN
GAKKSPARLRKEEILRRHVTGPGRLIIGGEEVDVGYSNGGGGGDGGDDDD
KDFDGGATYADDFDEDDDDQGVYEDGLFVDEYGRVFDGEVFVDEFGEGFD
GELYVDDFGDTFDGVYEGVLYDDDDVEGDGGGVYYFRNGEMPLGDDGGFA
DDYYFQEHYDGDDRGCGRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFV
QPPGWGGRLGSGRLAMLADASEMRRR*
back to top

mRNA from alignment at Ecto-sp13_S_contig9341:474..6019+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9341.20942.1 ID=mRNA_Ecto-sp13_S_contig9341.20942.1|Name=mRNA_Ecto-sp13_S_contig9341.20942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9341:474..6019+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCTGGGCGTCAGCATCGAGGGTACCTCCGGCTTGGCGGCCCCCGCCGG
GGAAGAAGATCTAAACGGCAGCGAGCGGGGTAACGTTGGGTTCGAGCTCA
CGGTGATATTCTCCTCGGTTCTCAGGGCCGCGCGCCTGCCCTCCGTCGCT
CTCGACGCGCTCCACGGAGCGGTAGGGCTCACGATGACGGACAAGCAGAG
AGCGGCCTGGGAGACCGAGAGGGCTCTGGTGTGGCTGCAGCTGGGTAGGG
TGGAGGAGGCCGTTGTCGGGCTCAAGAGCGCGCTTGGCTGGGACGCGGGT
GACCTCCAGGTTCTGCAGCCGTTGGGCGCGGCTCTTGTGGCTCAGGGGTC
CGTGGCGGAAGGTGAGTTGGGGTTCTGGCTCGGGTCGAAACAGATTGGGG
AGGGGATGTCTCTTGTTGGTGTGGTCATCTTGCCTTGCCTACACTTGGAG
GTAGCATGTAGAAGGGAGAGAGCACTACATGGGCCGAAACACCGGCGAAG
ACTACAATACCGTGAGGAGTCAAGACTTTGTCAAGGGACTTGTAGGCTTG
TCCACAGTGGCTGGCTCGGTGGCCACCGCATAGAGGGAGTCAGGACCCGT
CTAAATACGGACAGACAATGAAAGGCTGTGATCCGATCCCTTTGCTAGAC
ATCGTTTACAGTCGCATCATGCTTGTGTCGTGGTGGAAAGCATTACGCAA
AACCATCTACCTTGGCGTTCAAGCCCCCCCCACGAATACACACCTTCCCG
TCTTGACAGGCTTCCGCTTCCTGCGGGAGGCCGCCGAGCTACAAAAGAGC
AGGATCGCCACCGTGTTCGAGCAGGTCGTCCGGAACCAGGGGTTGGATCC
TTCAATCTTGGAGACGAAGAATCGAAAGGTGTGTCGAAAGAGGTACAACT
ATCCAGGTCTTCCAGATGGCTGTCTGTAGAGGGGCGCAGCGACCTCGAAA
CAGGATTTACTTGTGGCCGTTCTTGTCAGGTTTAGGGGGGATGGGGAAGT
TTAAGGGGGAGGAGAGTTTTTTTTGGTCGTCGACGCCCGTTTTGTCAAGC
CTTTGGTGGTGGTCTGCATGTCGGATTCTGTCCGCCTTAGTCGCGAAAGG
AAGTTTCTAGTCTGACGCCCGATCATGACTCATGTCGTTCAGCCCCCCAG
GCTCCGTGGTTCACTCGGAGTGTTAGCGTTACCACCTCAATGTTAACCCC
GATCAATGCTTCATTTTGAATCTGATTTTATTCCGATCCATGGCCTTGAC
CGCCAATGTCGAGCTTCTCCATTTCGTACCTGGTGATTTGACTCCGGCCA
AGGGCCTTGACACCCATGTTCCTCTCTTCGCCGAAACAAACCAAGGAGGT
GCTGGTGACCCAGCGGAACTGGATGGCGATGTTCCTGGGATGGGCTCTGC
AAGGGAAATGGAAGAAGCTCGGCGGTTCGGTGCACGTGCTGCGAAGGGTG
GACAACTTCTTGAGGAGGCATTTTTCGGCAGACTCCGAGGTTCGGTACGG
CGGTACTGTAGCGGGTGGTGGCGGTGCACGGAACAGCAGCGGTGACAAAT
AGTCTATTGTATGATGGTTTCTCTCAAGTGGTTGCGTCCGTCCTGTCGTG
GTTCAGTACCTTTTGCTGGTGTTCGCACGCTGGGTGACGTGTCAGCTCGG
ACGTTTTTCCGGTGTCCGCGTGCCGTTAGCGGTGCAAGGTTATGATGACA
CCCACGTTGTGGTCCCTCCGTCCTTCTCTCTCAGATTTCGTTCATGCTTG
GTCGAGAGCTTTCCAAGCGCGGGTTCCAGAAGGAATCTTGGCACTACCTC
ACGAGCGCGGCGGCACCGTGGAACAGACAGGTACACTGCGTAAGGATACC
TCTAGGGGGCGGCGGGGGGCTGGGGGGGGGCACGATGCCGTAGCGTTTTC
TCAAGCCCTTGAGTGCTACCAACTCATCCTTTGCGTGAGGTCGGCGGTTG
AGGTGGATATTTCGTCTGCAACGGTCACCGGTCGCGAGGATGCACCGATC
ACAGATGCCATTTTCTCACCCCTCCGCGACTGTCTCGGTCCGGTATCCAC
GGTGGTTTCGCAAGTTGTACGTTGAAAACCACGCCCCTTTCTTTCCAACA
AGCACTTGGTCATGGTCAACCAATGACTCCCCTTCCGCGCGCTCGCCAAT
TACGATCATCTTCGAAACACGGACATGCCTGTGCAAGCAGATTTACCGGA
TCCGATCAGCCCTGTCAATCCCGACCGTGGCAAGCAGCGAGCAGGACCTC
GCGCTAGCCATGGCAACCCTGGAGGGTTGGTTAAGGCGCCAGGAGCCCCC
TGTCCAGGACCCGCCCGAACCCGCTCGGCGTCGTGGCGACCACACCCCCA
CTACCACCAGTAGCGGTGGTGACTTCGAGACGCCCTTGTCGAGCTGCTCG
TTCGGGGCGTTAAACTACCCCGACGTCGCGTTCGACAGCCTCCCGCTGCT
GGCGTTCGCGGACCACCGGTACCCGCGTCGAAATCGCAGCGGTCTCGCCG
ATTCTCGCCGCTCTCCTGCGGGCGGGGGCGGAACGGGGGACGGCGACAAG
GACGAGGGTGTGCCGCCGGGGGGGGTCAGTGGCGAAGTCGACGGAGACGC
CTGGAGAAAGCCGGGGTTGGCGGGCCGATCGGCAGGGAAGGGGTTAGACG
AGAACGGAGGGGACGACGCTGATGGGGTGTCCCTGTACGGGTCGATCGGA
CGGCTGTTTTGGAGGCTCTGTCCCGACCTCGGGGCCTTCGTGGCCCCCTG
GTTGGATCGATATGGCGGGGCCTCCAGCCTGGCGCCGGAGGCGGACGGTG
GGCTCCGCGGAGAGGCGGACGGGAGGGTCAGGGTCGCTTTCGTGTCGTCG
CGGTTCGGGAATCACGCCACTACTAAGGCGCTAGCCGCGCTCATGCGTTT
GCTTCCCCGGCAGCATTTCGAGGTGATGAGGGGTAAGGGTGTGCACAGCT
CTCTGCGTCCGCGAGAGATGCAGGGCTGGCGACGACAAGCGAGACACAAC
GTGATGTGTATCTACCGTTCGGCGTTTTTTGGGTGGCTTTTTTCGTTGAG
CTGTATATATTAGTGTTAACTCGAGGGTCATTCTTCCTTTTTTGTTCTTT
TCCATCAGCATGTTATTTTTTTTTGCGCGTTATTTCTGGAGGTATGATTC
TGGATGAAACCACTACCGCTGTACACCGTGCAAACCTCGCACCTGTCTGC
TGTACGAAAGGTGATTCTGGGGTCATGGCCGACGCCTTCCGACGACTGGA
CCGAGGAGCACGTACTCGGGAGCACCGAGAGCCGTTCCGCCAACCTCGTG
TTCAACCGCACCGCCTCCCTCCAGAAGCTGGCACATAGGCGGCCGGATGT
GGTGGTCTTCGCCGACGCGCCTTTCGACGCAAAGACTTACTTCTTGGCCT
TCGGGAGGGTGGCACCCGTCCAGGCAAGAGATTAATATTCGTTTGTAAGA
CGGCGATCGATGATGCGTGCGGAGGCACGTGTTGCATTTTTTGTGTTTTT
GGGCTTGGGCTGGGCCTCGGCTTTGAACTCGACGTCCTTAACTCTGCGTA
ACTGCTGGTTATTTCGCCCCACTTTCCGCCTTTCAAGGCACGATCCCAGC
CCATCGCACGTCCTCTACAGTACTCATTCCTTGTTGTCGTGACATACGCT
ATCCTGCACGCAACTCTCCAATTTCATGTCGAGCAAGCTCAAGACATACC
GCAAGGCGACCGCCAAAAAATGCGTAGCTAAGAGGAGGGGCGCAACCGCT
ACAATTGTTCCACCCTCTCGTCGACGCACTCTACGCCACCTCCGTCGCTG
CTCCTCGTATGTATGCCACTACCGTCCGCTCAGATCGCTCTTTGGGGCCA
CGCTCCGACGCTCGGCATCAACTCGATCGACTACTACGTTGTCCCCGAAC
CCCTTGTCGCCGACGCCTGGTTGGGAGACGACGAACTCCAGACGCCGAGA
GACTCGGCACGCGAGGGGAAAGTACTCGACGACGAAGAGGAGGACGATTT
CCTTTTCTGGGAACGTCCGGCCGGGCCTGATGGCAGTGCAAACGACGGCG
GCATGAAGCACCGGGGGGTGCGCCGCGGGAGTGACGCTACCGCCAATGAC
GGAGGGGGTGGTAACGGTAGGCGTAGGAATAACGCCTGGCAAGGTCGGAG
AGACCCGCCGAGGAGCTTCGCGTTTCCGGAACCCCCGACGAGAGATTTCG
CGGGGGCCCCGCTCGATCCGTGTGATGATGACGGTAACGGCGAGGAACCA
CGGAACGCGTTCCAGTGCCGAAACGGATTACCGCCGAGGGCGGGGGGGTC
GGGGCCGGCGACGGGGGCTGTGGACCCTGAGAAGAAAGTCGGACAAACAT
CTGGGGCGGCGGCGGCAGCGGCGGCGGCAGGGCCGGGGCCGGGTGTAGAA
GCGGGGGGGGGTAGAGCGGGGAGTGCAGGCCGTAGCGATATGCGGCTGAA
GATGGGCATGGCCGCGGCTGCGGAAATGGAAGGGGCAGAGGAGGACTACG
ACGACGATGACGACGACGACGACGACGACATCAACCTGTATGGCATTTTT
ACCGATGACGGCGACCTCGTGGAGTACGAAAGCCTCGTGGCGACGCTGAA
AGAGAGGGGCAAGGGGCGGGAGGAGCTAGAGCGAATCGTGAGCGCGCTCC
TGGAGCAACAGGCGCTCCTGGACGAGCAGGAGGAGGGGGGAGACGCGAAT
GGTGTCGATGGGGGGTGGTGGCCTGAAGAAGACCGAGAACGAGGCGACGA
CAGCGTTGCTACGGAGAACCAGCACGGACAACATTTCCCGCACGGCGACG
TCGACATGAGTGCCCGGATCCACCAGCGCGCGGGAAGCAGAGCCGCACGA
GACGATGCCCAGAACGGTGCGAAGAAGAGCCCCGCCAGGTTGCGAAAGGA
GGAGATCCTGAGGAGGCACGTGACAGGCCCCGGGCGCTTGATCATCGGCG
GAGAGGAAGTCGACGTCGGGTACTCGAATGGCGGCGGCGGCGGCGATGGC
GGCGATGACGACGACAAAGATTTCGATGGCGGAGCCACATACGCCGATGA
TTTCGACGAAGATGATGACGACCAAGGGGTGTACGAGGACGGCCTGTTCG
TGGACGAGTATGGCCGCGTCTTCGACGGCGAGGTGTTCGTGGACGAGTTC
GGCGAAGGTTTCGATGGCGAGCTGTACGTGGACGACTTCGGTGATACCTT
CGACGGGGTCTATGAGGGTGTTCTCTACGATGACGACGACGTCGAGGGAG
ACGGGGGAGGCGTCTATTACTTCAGGAACGGTGAAATGCCGCTGGGCGAT
GATGGAGGCTTCGCGGATGACTATTATTTCCAAGAGCACTACGACGGCGA
TGACAGGGGCTGCGGCAGGAGCAGCGGTGATTGGCCACGCCCGTGGGCCG
GTGTCGACTACGCCGAGACGGTGGAAGAGCAAGTGGTTTTCTTGGAGAGC
TTGGGCGCGTTTGTGCAGCCTCCCGGGTGGGGGGGGCGGCTCGGTAGTGG
ACGGCTGGCGATGCTAGCAGACGCTTCGGAGATGAGACGAAGGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9341:474..6019+

>mRNA_Ecto-sp13_S_contig9341.20942.1 ID=mRNA_Ecto-sp13_S_contig9341.20942.1|Name=mRNA_Ecto-sp13_S_contig9341.20942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3381bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9341:474..6019+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCTGGGCGTCAGCATCGAGGGTACCTCCGGCTTGGCGGCCCCCGCCGG
GGAAGAAGATCTAAACGGCAGCGAGCGGGGTAACGTTGGGTTCGAGCTCA
CGGTGATATTCTCCTCGGTTCTCAGGGCCGCGCGCCTGCCCTCCGTCGCT
CTCGACGCGCTCCACGGAGCGGTAGGGCTCACGATGACGGACAAGCAGAG
AGCGGCCTGGGAGACCGAGAGGGCTCTGGTGTGGCTGCAGCTGGGTAGGG
TGGAGGAGGCCGTTGTCGGGCTCAAGAGCGCGCTTGGCTGGGACGCGGGT
GACCTCCAGGTTCTGCAGCCGTTGGGCGCGGCTCTTGTGGCTCAGGGGTC
CGTGGCGGAAGGCTTCCGCTTCCTGCGGGAGGCCGCCGAGCTACAAAAGA
GCAGGATCGCCACCGTGTTCGAGCAGGTCGTCCGGAACCAGGGGTTGGAT
CCTTCAATCTTGGAGACGAAGAATCGAAAGGAGGTGCTGGTGACCCAGCG
GAACTGGATGGCGATGTTCCTGGGATGGGCTCTGCAAGGGAAATGGAAGA
AGCTCGGCGGTTCGGTGCACGTGCTGCGAAGGGTGGACAACTTCTTGAGG
AGGCATTTTTCGGCAGACTCCGAGATTTCGTTCATGCTTGGTCGAGAGCT
TTCCAAGCGCGGGTTCCAGAAGGAATCTTGGCACTACCTCACGAGCGCGG
CGGCACCGTGGAACAGACAGCAGATTTACCGGATCCGATCAGCCCTGTCA
ATCCCGACCGTGGCAAGCAGCGAGCAGGACCTCGCGCTAGCCATGGCAAC
CCTGGAGGGTTGGTTAAGGCGCCAGGAGCCCCCTGTCCAGGACCCGCCCG
AACCCGCTCGGCGTCGTGGCGACCACACCCCCACTACCACCAGTAGCGGT
GGTGACTTCGAGACGCCCTTGTCGAGCTGCTCGTTCGGGGCGTTAAACTA
CCCCGACGTCGCGTTCGACAGCCTCCCGCTGCTGGCGTTCGCGGACCACC
GGTACCCGCGTCGAAATCGCAGCGGTCTCGCCGATTCTCGCCGCTCTCCT
GCGGGCGGGGGCGGAACGGGGGACGGCGACAAGGACGAGGGTGTGCCGCC
GGGGGGGGTCAGTGGCGAAGTCGACGGAGACGCCTGGAGAAAGCCGGGGT
TGGCGGGCCGATCGGCAGGGAAGGGGTTAGACGAGAACGGAGGGGACGAC
GCTGATGGGGTGTCCCTGTACGGGTCGATCGGACGGCTGTTTTGGAGGCT
CTGTCCCGACCTCGGGGCCTTCGTGGCCCCCTGGTTGGATCGATATGGCG
GGGCCTCCAGCCTGGCGCCGGAGGCGGACGGTGGGCTCCGCGGAGAGGCG
GACGGGAGGGTCAGGGTCGCTTTCGTGTCGTCGCGGTTCGGGAATCACGC
CACTACTAAGGCGCTAGCCGCGCTCATGCGTTTGCTTCCCCGGCAGCATT
TCGAGGTGATTCTGGGGTCATGGCCGACGCCTTCCGACGACTGGACCGAG
GAGCACGTACTCGGGAGCACCGAGAGCCGTTCCGCCAACCTCGTGTTCAA
CCGCACCGCCTCCCTCCAGAAGCTGGCACATAGGCGGCCGGATGTGGTGG
TCTTCGCCGACGCGCCTTTCGACGCAAAGACTTACTTCTTGGCCTTCGGG
AGGGTGGCACCCGTCCAGATCGCTCTTTGGGGCCACGCTCCGACGCTCGG
CATCAACTCGATCGACTACTACGTTGTCCCCGAACCCCTTGTCGCCGACG
CCTGGTTGGGAGACGACGAACTCCAGACGCCGAGAGACTCGGCACGCGAG
GGGAAAGTACTCGACGACGAAGAGGAGGACGATTTCCTTTTCTGGGAACG
TCCGGCCGGGCCTGATGGCAGTGCAAACGACGGCGGCATGAAGCACCGGG
GGGTGCGCCGCGGGAGTGACGCTACCGCCAATGACGGAGGGGGTGGTAAC
GGTAGGCGTAGGAATAACGCCTGGCAAGGTCGGAGAGACCCGCCGAGGAG
CTTCGCGTTTCCGGAACCCCCGACGAGAGATTTCGCGGGGGCCCCGCTCG
ATCCGTGTGATGATGACGGTAACGGCGAGGAACCACGGAACGCGTTCCAG
TGCCGAAACGGATTACCGCCGAGGGCGGGGGGGTCGGGGCCGGCGACGGG
GGCTGTGGACCCTGAGAAGAAAGTCGGACAAACATCTGGGGCGGCGGCGG
CAGCGGCGGCGGCAGGGCCGGGGCCGGGTGTAGAAGCGGGGGGGGGTAGA
GCGGGGAGTGCAGGCCGTAGCGATATGCGGCTGAAGATGGGCATGGCCGC
GGCTGCGGAAATGGAAGGGGCAGAGGAGGACTACGACGACGATGACGACG
ACGACGACGACGACATCAACCTGTATGGCATTTTTACCGATGACGGCGAC
CTCGTGGAGTACGAAAGCCTCGTGGCGACGCTGAAAGAGAGGGGCAAGGG
GCGGGAGGAGCTAGAGCGAATCGTGAGCGCGCTCCTGGAGCAACAGGCGC
TCCTGGACGAGCAGGAGGAGGGGGGAGACGCGAATGGTGTCGATGGGGGG
TGGTGGCCTGAAGAAGACCGAGAACGAGGCGACGACAGCGTTGCTACGGA
GAACCAGCACGGACAACATTTCCCGCACGGCGACGTCGACATGAGTGCCC
GGATCCACCAGCGCGCGGGAAGCAGAGCCGCACGAGACGATGCCCAGAAC
GGTGCGAAGAAGAGCCCCGCCAGGTTGCGAAAGGAGGAGATCCTGAGGAG
GCACGTGACAGGCCCCGGGCGCTTGATCATCGGCGGAGAGGAAGTCGACG
TCGGGTACTCGAATGGCGGCGGCGGCGGCGATGGCGGCGATGACGACGAC
AAAGATTTCGATGGCGGAGCCACATACGCCGATGATTTCGACGAAGATGA
TGACGACCAAGGGGTGTACGAGGACGGCCTGTTCGTGGACGAGTATGGCC
GCGTCTTCGACGGCGAGGTGTTCGTGGACGAGTTCGGCGAAGGTTTCGAT
GGCGAGCTGTACGTGGACGACTTCGGTGATACCTTCGACGGGGTCTATGA
GGGTGTTCTCTACGATGACGACGACGTCGAGGGAGACGGGGGAGGCGTCT
ATTACTTCAGGAACGGTGAAATGCCGCTGGGCGATGATGGAGGCTTCGCG
GATGACTATTATTTCCAAGAGCACTACGACGGCGATGACAGGGGCTGCGG
CAGGAGCAGCGGTGATTGGCCACGCCCGTGGGCCGGTGTCGACTACGCCG
AGACGGTGGAAGAGCAAGTGGTTTTCTTGGAGAGCTTGGGCGCGTTTGTG
CAGCCTCCCGGGTGGGGGGGGCGGCTCGGTAGTGGACGGCTGGCGATGCT
AGCAGACGCTTCGGAGATGAGACGAAGGTGA
back to top