mRNA_Ecto-sp13_S_contig9337.20936.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: D8LCT7_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT7_ECTSI) HSP 1 Score: 252 bits (644), Expect = 5.900e-82 Identity = 125/132 (94.70%), Postives = 129/132 (97.73%), Query Frame = 3
Query: 270 TLPPGGTVSLGVSRRPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
TLPPGGTVSLGVSRRPPPDD SGELLSRSKLGDGEKTWGFCTSDGGAA TLKEGDVIGIALDFTDLPMLFFTRGG+PLGEGDELAV+RIRG+VYPAFGVGGGAALSVAFAGDSLAH PPRKCEALIVGQDM+
Sbjct: 2 TLPPGGTVSLGVSRRPPPDDASGELLSRSKLGDGEKTWGFCTSDGGAAGTLKEGDVIGIALDFTDLPMLFFTRGGDPLGEGDELAVMRIRGTVYPAFGVGGGAALSVAFAGDSLAHTPPRKCEALIVGQDMM 133
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A7S4Q9N0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q9N0_9DINO) HSP 1 Score: 105 bits (261), Expect = 1.740e-23 Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 3
Query: 189 ATLSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSRRPPPDDTSGELLSRSKLGDGE-KTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
AT+SGSG+ LG A VEQD+AYWE V +LP GG+ +GV+R+ P D + R G ++W + + +L EGDV+G+A +LP L F GEPL G +V IRG+V PAF V GGA LSVAF D + PP + LI + ++
Sbjct: 61 ATVSGSGVVLGGAEVEQDAAYWEVRVVSLPEGGSCCMGVARQTVPLDAALSAPMRPGAEAGAAQSWALSS----LSASLMEGDVVGVAFGLGELPNLRFFCNGEPLEVG---SVTHIRGTVCPAFSVHGGAVLSVAFERDGFRYPPPARFTELIPTRSLL 213
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A7S4QBI5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QBI5_9DINO) HSP 1 Score: 100 bits (250), Expect = 8.020e-22 Identity = 67/170 (39.41%), Postives = 90/170 (52.94%), Query Frame = 3
Query: 192 TLSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSRRPPPDDTS------------GELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
T+SGSG+ LG A VEQD+AYWE V TLP GG+ +GV+R+ P D G ++ G + + S A+ L EGDV+G+A +LP L F GEPL G +V +RG+V PAF V GGA L+V F D + PP K LI + ++
Sbjct: 56 TVSGSGVVLGGAEVEQDAAYWEVRVVTLPEGGSCCMGVARQSVPLDAPLVAPARPDPEVLGAATDLAEAGAAPASVSWALSS--ASALLNEGDVVGVAFGQGELPNLRFFCNGEPLERG---SVAHVRGTVCPAFSVHGGAVLTVTFEHDGFRYTPPAKFTELIPMRSLL 220
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: F0Y3A2_AURAN (SPRY domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3A2_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 2.090e-17 Identity = 68/180 (37.78%), Postives = 89/180 (49.44%), Query Frame = 3
Query: 126 PTLSETMKGAEIILQQSSGRPATLSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSRRPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
P + G ++ ++ S+ A L GSG+A +EQD+AYWE V G +GV R GE +LGDG+ +W ++ GA E GDVIG+A +LP L F GE L G V RIRG V+PA V GGA L F + H PPR AL V Q++I
Sbjct: 25 PLVRLDRNGGDVSVESSATGDA-LGGSGVAYTSTAIEQDAAYWELHVEAA---GPFRVGVCRE------LGEAQLGGELGDGQTSWALDSAAAGAVE----GDVIGVAFGQAELPNLSFFLNGELLEHG---MVNRIRGEVFPAASVTGGAKLRCVFDEANFEHAPPRTHSALRVTQNII 187
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A7S2CN07_9STRA (SPRY domain-containing protein 7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN07_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 8.870e-16 Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 3
Query: 180 GRPATLSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSRRPPPDDTSGEL---LSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
G ++G G+AL AP+EQD+AYWE VT G + +GV+R+ GEL S + ++W C L++GDV+G+A DLP L FT+ G+ + D V +I G+VYP +GGGA++ F + + + PP + L+V + ++
Sbjct: 57 GESLCITGDGVALASAPIEQDAAYWEIHVTKT---GLIKVGVARKM----NRGELDKTFDASAKDENGRSW--CLDGTDTRANLEDGDVVGVAFTQADLPNLSFTKNGKAINFAD---VKKIPGTVYPVVMIGGGASIEAVFDPEKMNNQPPPTFKPLMVVRSIL 209
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: K0T616_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T616_THAOC) HSP 1 Score: 68.9 bits (167), Expect = 5.520e-10 Identity = 83/262 (31.68%), Postives = 109/262 (41.60%), Query Frame = 3
Query: 30 MGCCESLMRAVLGGS-SGGGKAEVELGGASKNSPT----LSETMKGAEIILQQSSGRPATLSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSRRPPPDDTSGELLSRSKLGDGEKT-----WGFCT--------------SDGGAAET-------------LKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAF----GVGG--------GAALSVAFAGDSLAHIPPR-KCEALIVGQDMI 665
MG C S A+ GG SG E+ +++ P LS M I +Q +SGSGLAL PVEQD+AYWE V+ PG T G D G+L DGE+ +G T +G A + L+ GDVIG+AL +DLPM+ GEPL E + R RG+VYPA G GG G +L+ F D + P + L+V Q +I
Sbjct: 1 MGACCSCFDAITGGKHSGESSQEMTTRNSARGVPPASHGLSRAMSAPTISIQGFK-----VSGSGLALTRIPVEQDAAYWEIHVSI--PGQTAPSG--------DEDGDLQDVDVNDDGEEDPYAVKFGVATRKDREFYRSLETVEEEGDQASSRDDGTFLMRPISNLRHGDVIGVALQQSDLPMIQILLNGEPLLE---CIINRFRGTVYPAVYMPAGAGGEGERVDDEGMSLNFVFDEDEFKEMSPHARFGPLLVAQGII 244
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A1Z5JFB4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFB4_FISSO) HSP 1 Score: 62.8 bits (151), Expect = 4.250e-8 Identity = 59/176 (33.52%), Postives = 83/176 (47.16%), Query Frame = 3
Query: 36 CCESLMRAVLGGSSGGGKAEVELGGASK-NSPTLSETMKGAEIILQQSSGRPATLSGSGLALGCAPVEQDSAYWEATVTTLPP-GGTVSLGVSRRPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPA 557
CCE AV + E++ A+ S ++S M + +Q +SG GL L VEQD+AYWEA + P VS GV+ + D + D + T + +K+GDV+GIA+ +DLPM+ F GEPL +LAV R RG+VYPA
Sbjct: 7 CCEDASAAVS-------ETEMKEQKATNIKSLSISRVMSAPSVDVQDD----CKMSGYGLGLVGVAVEQDAAYWEAHIQHDPGMSQEVSFGVATKK--DQQFYRSMEEQDSADAKGTSLM------RSIKVKDGDVVGIAVQQSDLPMVQFLLNGEPL---HDLAVNRFRGAVYPA 160
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A7S2KX06_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KX06_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 8.610e-7 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 3
Query: 195 LSGSGLALGCAPVEQDSAYWEATVTTLPPGGT---------VSLGVSRRPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGSVYPAFGVGGGAALSVAFAGDS--LAHIPPR-KCEALIVGQDMI 665
+ G GLAL +EQDSAYWE + T + GV+++ ++ EL S + + + + F L +GD++G+A+ +DLPM+ F GEPL +A+ R RGSVYPA + AL V F D + PP K +A+++ + ++
Sbjct: 57 IRGKGLALSSVSIEQDSAYWEIRIGTTDGQDDEHDENAFEILKFGVAKQ----CSTLELNSIQDISEDDDSNRFFLR---GIPNLVDGDIVGVAVQQSDLPMVQFIINGEPL---HHMAINRFRGSVYPAVWLPLPDALQVEFIWDEGQWKYEPPSAKFKAIMLARSIV 215
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A836CE96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE96_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.950e-6 Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 3
Query: 270 TLPPGGTVSLGVSRRPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIR-IRGSVYPAFGVGGGAALSVAFAGDSLAHIPPRKCEALIVGQDMI 665
T+ GT+ LGV D + LS S G +WGF T + A+ G V+GI ++++ LPM+ G E+A +R +RG+VYPA V GGAA V F G + PRKC AL +DMI
Sbjct: 2 TIQKPGTIGLGVLWHTNATDLAAVTLSDSADG----SWGF-TREYTEADV---GTVLGICVNWSALPMMRLLDAA-----GAEVASVRRVRGTVYPAVTVRGGAACDVRFGG--FEGVVPRKCTALTRVKDMI 119
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Match: A0A7S3MB57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB57_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.370e-6 Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 3
Query: 27 EMGCCESLMRAVLGGSSGGGKAEVELGGASKNSPTLSETMKGAEIILQQSSGRPAT-LSGSGLALGCAPVEQDSAYWEATVTTLPPGGTVSLGVSR--RPPPDDTSGELLSRSKLGDGEKTWGFCTSDGGAAETLKEGDVIGIALDFTDLPMLFFTRGGEPLGEGDELAVIRIRGS--VYPA 557
EMGCC + + +VE+ + +S KG ++++ Q A +SGSG +G ++ D+A WE V P G +S+GV + + P D + L S TW ++ LKEGDV+G+ D TDLPM+ F+ GE + V RIR S +YPA
Sbjct: 2 EMGCCAARYESE----------DVEMVEGTNDSVCCKNGPKGDDVVVSQVGDSCAYGVSGSGTLVGSCCLDCDTAMWEVRVGKNP--GGISIGVKKFFKKNPVDLNTHLDSSPDPA--SPTWFLTETE------LKEGDVVGVYWDQTDLPMVSFSVNGEMV----RYNVSRIRPSNDIYPA 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9337.20936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9337.20936.1 >prot_Ecto-sp13_S_contig9337.20936.1 ID=prot_Ecto-sp13_S_contig9337.20936.1|Name=mRNA_Ecto-sp13_S_contig9337.20936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp MGCCESLMRAVLGGSSGGGKAEVELGGASKNSPTLSETMKGAEIILQQSSback to top mRNA from alignment at Ecto-sp13_S_contig9337:484..4260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9337.20936.1 ID=mRNA_Ecto-sp13_S_contig9337.20936.1|Name=mRNA_Ecto-sp13_S_contig9337.20936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9337:484..4260- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9337:484..4260- >mRNA_Ecto-sp13_S_contig9337.20936.1 ID=mRNA_Ecto-sp13_S_contig9337.20936.1|Name=mRNA_Ecto-sp13_S_contig9337.20936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9337:484..4260- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |