mRNA_Ecto-sp13_S_contig9319.20914.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5JSZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ2_9PHAE) HSP 1 Score: 141 bits (356), Expect = 4.730e-40 Identity = 73/93 (78.49%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 64 MSEMFVILLLGLSALLDTSAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALE 342
M EM +I+LLGLS LDTSAV+ CLDSTDADRCQ DA+G LS CGITDAD DDLA CLEAAGPETIT L LS NELTTLPEGIFGGLTAL+
Sbjct: 1 MLEMTLIILLGLSTFLDTSAVNVCLDSTDADRCQIDANGNLSLGLCGITDADFDDLASCLEAAGPETITTLYLSHNELTTLPEGIFGGLTALQ 93
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5K2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E6_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.570e-39 Identity = 72/95 (75.79%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 64 MSEMFVILLLGLSALLDTSAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
M EM +I+LLGLS LLDT AV+ CLDSTDADRCQ DA G L CG TDAD DDLA CLEAAGPETIT L L NELTTLPEGIFGGLTALE+L
Sbjct: 1 MLEMTLIILLGLSTLLDTFAVNVCLDSTDADRCQIDAHGNLILGLCGTTDADFDDLASCLEAAGPETITTLYLYRNELTTLPEGIFGGLTALETL 95
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5KAY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY3_9PHAE) HSP 1 Score: 137 bits (345), Expect = 3.440e-38 Identity = 70/98 (71.43%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 49 TRRGRMSEMFVILLLGLSALLDTSAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALE 342
T R+ EM I+LL L LLD SAV+ CLD+TDADRC+ DADG L ++CGITDAD DDLA CLE AGPE IT+LSLS NELTTLPEGIFGGLTALE
Sbjct: 112 TTMRRLLEMTSIILLVLFTLLDISAVNVCLDTTDADRCEIDADGQLDLYSCGITDADFDDLASCLEDAGPEAITYLSLSQNELTTLPEGIFGGLTALE 209
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5KI88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI88_9PHAE) HSP 1 Score: 120 bits (301), Expect = 2.880e-33 Identity = 64/95 (67.37%), Postives = 70/95 (73.68%), Query Frame = 1
Query: 64 MSEMFVILLLGLSALLDTSAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
M EM I+LLGLS LL+TSAV+ CLD+TDA CQ +A L CGITDAD DDLA CLEAAGPE IT L L NELTTLPEGIFG LT L+ L
Sbjct: 1 MLEMTSIILLGLSTLLNTSAVNVCLDTTDAGNCQIEAGETLDLSDCGITDADFDDLASCLEAAGPEAITTLFLYENELTTLPEGIFGSLTGLQML 95
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5KAC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC1_9PHAE) HSP 1 Score: 116 bits (291), Expect = 9.040e-32 Identity = 59/77 (76.62%), Postives = 62/77 (80.52%), Query Frame = 1
Query: 118 SAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
+ V CLDSTDADRCQ DA+G LS CGI D D DDLA CLEAAGPETIT L LS NELTTLPEGIFGGLTALE+L
Sbjct: 8 NTVSICLDSTDADRCQIDANGNLSLGLCGIADTDFDDLASCLEAAGPETITTLYLSVNELTTLPEGIFGGLTALETL 84
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 2.180e-20 Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 52 RRGRMSEMFVILLLGLSALLDTSAVHECLDSTDAD-RCQTDADGFLSFWACGITDADLD--DLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
R R ++ + +LLG +ALL TS + CLD TD D RC+ DA+G L C I D D+D DLA CL+AAG E++ FL L N+LTTLP+G+F LTA+E+L
Sbjct: 29 RLPRSMKVLLAVLLGPTALLGTSKANSCLDPTDTDYRCEIDAEGTLDLSECLIADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTAMETL 130
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.970e-20 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 61 RMSEMFVILLLGLSALLDTSAVHECLDSTDAD-RCQTDADGFLSFWACGITDADLD--DLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
R ++ + +L+GL+ALL TS + CLD TD D RC+ DA+G L C + D D+D DLA CL+AAG E++ FL L N+LTTLP+G+F LT++E+L
Sbjct: 40 RSMKVLLAVLVGLTALLSTSEANSCLDPTDTDYRCEIDAEGTLDLSECLVADDDVDSGDLAACLDAAGRESVIFLDLGRNDLTTLPDGVFLDLTSMETL 138
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 3.020e-8 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 199 CGITDADLD--DLAPCLEAAGPETITFLSLSSNELTTLPEGIFGGLTALES 345
CGITD D+D DLA CL+ AG E + L LSSN LTTLP GIF GLT L++
Sbjct: 86 CGITDEDVDGGDLASCLDNAGRELVVELWLSSNALTTLPAGIFEGLTVLDA 136
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: D7G7X9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 5.030e-7 Identity = 43/104 (41.35%), Postives = 52/104 (50.00%), Query Frame = 1
Query: 64 MSEMFVILLLGLSALLDTSAVHECLDSTDADRCQTDADGFLSFWACGITDADLDDLAPC---------LEAAGPETITFLSLSSNELTTLPEGIFGGLTALESL 348
M EM +ILLLGLSALLDTSA G++ W + +D+ + C L + P L+ NELTTLPEGIFGGLTALE L
Sbjct: 1 MLEMLLILLLGLSALLDTSA-----------------GGWVGGW---VGSSDIGEYHRCNGSSITVCSLPRSWPSLGIHRDLTYNELTTLPEGIFGGLTALEYL 84
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Match: D7FIG5_ECTSI (Similar to Leucine rich repeat containing 15, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG5_ECTSI) HSP 1 Score: 53.1 bits (126), Expect = 9.640e-7 Identity = 35/80 (43.75%), Postives = 41/80 (51.25%), Query Frame = 1
Query: 199 CGITDADLDDLAPCLEAAGPETI----------------------TF--------LSLSSNELTTLPEGIFGGLTALESL 348
CG+T+ DLDD+ CLEAAG TI TF LSLS+NELTTLP +FG LT+L SL
Sbjct: 4 CGLTNDDLDDIRSCLEAAGVSTIVELLLDTNGLTALKPDVSGSSGTFDGMTSLEVLSLSANELTTLPADLFGSLTSLVSL 83 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9319.20914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9319.20914.1 >prot_Ecto-sp13_S_contig9319.20914.1 ID=prot_Ecto-sp13_S_contig9319.20914.1|Name=mRNA_Ecto-sp13_S_contig9319.20914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp MPSLPETCSLYFLSSWTRRGRMSEMFVILLLGLSALLDTSAVHECLDSTDback to top mRNA from alignment at Ecto-sp13_S_contig9319:3453..6251+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9319.20914.1 ID=mRNA_Ecto-sp13_S_contig9319.20914.1|Name=mRNA_Ecto-sp13_S_contig9319.20914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2799bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9319:3453..6251+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9319:3453..6251+ >mRNA_Ecto-sp13_S_contig9319.20914.1 ID=mRNA_Ecto-sp13_S_contig9319.20914.1|Name=mRNA_Ecto-sp13_S_contig9319.20914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9319:3453..6251+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |