mRNA_Ecto-sp13_S_contig9251.20837.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9251.20837.1
Unique NamemRNA_Ecto-sp13_S_contig9251.20837.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: D7FXS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS7_ECTSI)

HSP 1 Score: 816 bits (2108), Expect = 2.260e-279
Identity = 454/519 (87.48%), Postives = 462/519 (89.02%), Query Frame = 1
Query:    1 VAPSVVEYAELGTGASAFGMGVCTVLLCVLSVYAIVEGCGIGRPRKRDTPLQEWEKGRKQREKNKRKAAASSSKYSAAPGKVIPVETAPDAAPAATGAADGYSVIAKEFDGAATA------DGSAGEMARLEEGAGGGXXXEPGGLTLPLAIPFLSPAPDAKPPEDPPKQSFHEEQPADSLPCQSCLNTQDKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLGXXXXXXXXXXXXXXXXXXEAPQEALMAATRKKRDPAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSCYE 1539
            VAPSVVEYAELGTGASAFGMGVCTVLLCVLSVYAIVEGCGIGRPRKRDTPLQEWEKGRKQREKNK KAAASSSKYSAAPGKVIPVETAPDAAPAATGAA G  VIAKEFDG A A      DGSAGEM+RLEEG G  XXXE GGLT PL +P +SPA DAKPPEDPPK+ F +E+  D LPCQSCLNT DKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLG                X E   EALMAATRKK+DPAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQ SRKPADE XXXXXXXXXX       KPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRK+RRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRA FVAANDADQLCDDPCQ ASGGSTCRALSCYE
Sbjct:  460 VAPSVVEYAELGTGASAFGMGVCTVLLCVLSVYAIVEGCGIGRPRKRDTPLQEWEKGRKQREKNKIKAAASSSKYSAAPGKVIPVETAPDAAPAATGAAGGDGVIAKEFDGTAAAXXXXXXDGSAGEMSRLEEGVGXXXXXEAGGLTPPLDVPGVSPAQDAKPPEDPPKRGFPDERLPDPLPCQSCLNTHDKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLGKAKKLAKAEAKLAKLKXKE---EALMAATRKKQDPAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQLSRKPADEEXXXXXXXXXXARRGRKKKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKLRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRASFVAANDADQLCDDPCQPASGGSTCRALSCYE 975          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A7S3UMZ3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMZ3_HETAK)

HSP 1 Score: 125 bits (314), Expect = 8.700e-27
Identity = 87/236 (36.86%), Postives = 127/236 (53.81%), Query Frame = 1
Query:  829 AFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYD-FPLDAALQRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSC 1533
            AFV+F +EES+ R  EDYR+S   F RRFQP +L F+++   +                      +++ L V +A EPS+V WENL+V    + +RRA+T+L+ + LL+ SFA+IY AQ ++ ++ E +P L  C+  +PAV FGTY+    +A++     +D SC DG FYL +  N T  D        LP +    G     A F  AN A  LCD  C  +S  ++C  LSC
Sbjct:   44 AFVSFNNEESQARACEDYRFSGHWFWRRFQPDRLMFTKETHVDKKTGKL----------------KKFPLVVQEAAEPSNVLWENLEVGWKEKLLRRALTALLTLALLVASFAVIYYAQLQKEQVAESMPDLTVCDTELPAVFFGTYEGSTANASITHVSGLDGSC-DGGFYLTYN-NVTVAD--------LPDLEVPGGNGT--AFFPRAN-ATGLCDGGCYSSSSSTSCVYLSC 250          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A662XQF3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQF3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.510e-25
Identity = 101/376 (26.86%), Postives = 160/376 (42.55%), Query Frame = 1
Query:  550 QDKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVV------RQMKTLGXXXXXXXXXXXXXXXXXXEAPQEA-----------------------------LMAATRKKRDPAA------LESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGS-----FYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSCYE 1539
            + + ++G WVA+V + +P G +L  F+  E     IS A+ ++      +Q   L                   + P+ A                             L A  R KR  A+      L +   AFV F + ES+RRCL+DYR+S R    RFQP  L+F                           R  +  LKV  APEPSD+ WENLDVTP SR++RR++T+ V  +LL++S AII  AQ+ Q   +++ P    C+  +P + +G+ DF      + + S + +C  G+     +++A++             D + PI+  + +  S  L          C +PC   S  +TC  L C++
Sbjct:   75 EQQMYLGTWVAEVSIAHPTGGLLRTFLSMEALTRRISDAQALIDILAKEKQQAEL-ELQLALQSLVPVQGKKHAKKPKSAFKPADELLLQTTTKELDRLQTSMRKKTKKLKALKRTKRQAASEDRTFDLTACLCAFVVFNNLESRRRCLQDYRHSDRRMAHRFQPKSLRF---------------------------RNGKHALKVLPAPEPSDILWENLDVTPRSRRLRRSLTNFVTFLLLLVSGAIISAAQSAQQTFKDKAPPAGLCDTALPEIFYGSQDFMNANPWELEWSSNVACTSGAKGESRYHIAYSN------------DVVNPIYVRNPSLSSNVLH--------RCVNPCVSESSSTTCHTLPCFD 402          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A662XWB5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWB5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.890e-24
Identity = 94/367 (25.61%), Postives = 151/367 (41.14%), Query Frame = 1
Query:  562 FVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMK--------TLGXXXXXXXXXXXXXXXXXXEAPQEALMAATRKKRD----------------------------PAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGS-----FYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSCYE 1539
            ++G WVA+V + +P G +L  F+  E     IS A+ ++  ++         L                   +   E L+ +T K+ D                            P  L +   AFV F + ES+RRCL+DYR+S R    RFQP  L+F                           R  +  LKV  APEPSD+ WENLDVTP +R++RR+ T+ V  +LL++S  II  AQ+ Q   +++ P    C+  +P + + + DF   +    + + + +C  G      +++A++ N  +P            I+       S  L          C +PC   S  +TC  L C++
Sbjct:   79 YLGTWVAEVSIAHPTGGLLRTFLAMEALTRRISDAQALISILEQEKQQAELALQNLVPVQGKKHAKKPKSAFKPADELLLKSTTKELDRLQTSMRKKTKKFKALKQTKRQAASEDKPFDLTACLCAFVVFNNLESRRRCLQDYRHSDRRMAHRFQPKLLRF---------------------------RNGKHALKVLPAPEPSDILWENLDVTPRARRLRRSFTNFVTFLLLLVSGTIISAAQSAQQTFKDKAPPAGLCDTALPEIFYASPDFMKASPWDLEWNPNVTCTSGDKGESRYHIAYSNNVVNP------------IYVRSPALASTVLH--------RCVNPCVSESSSTTCHTLPCFD 398          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A662XIN7_9STRA (RSN1_7TM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIN7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.780e-22
Identity = 81/269 (30.11%), Postives = 125/269 (46.47%), Query Frame = 1
Query:  778 AATRKKRDPAA------LESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDD---SMDSSCADGS-----FYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDAD-QLCDDPCQRASGGSTCRALSCYE 1539
            A TR +R  A+      L +   AFV F + ES+RRCL+DYR+S RG  RRFQP  L+F                           R  +  LKV  APEPS++ WENL+VTP SR++RR +T+ V  +LL++S AII  AQ+ Q   +++ P    C+  +P + + + +F   +     D   + +++C  G      +++A++ N                       N       A N ++   C DPC   S  +TC  L C++
Sbjct:  131 AQTRTRRQAASEDKPFDLTACECAFVVFNNLESRRRCLQDYRHSDRGLTRRFQPKSLRF---------------------------RDGKHALKVLPAPEPSNILWENLEVTPRSRRLRRGLTNFVTFLLLLVSGAIISAAQSAQQTFKDKAPPAGLCDTALPEIFYASPNFTKSSPKLTWDLEWNPNATCTPGDTGDTRYHIAYSNNVV---------------------NTIHVRNPAVNVSELHRCVDPCVSESSSTTCYTLPCFD 351          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A662XB93_9STRA (RSN1_7TM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB93_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.680e-20
Identity = 81/268 (30.22%), Postives = 125/268 (46.64%), Query Frame = 1
Query:  778 AATRKKRD------PAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDD---SMDSSCADGS-----FYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSCYE 1539
            A TR KR       P  L +   AFV F + ES+RRCL+DYR+S      RFQP  L+F                           R  ++ LKV  APEPS++ WENL+VTP +R++RR  T+ V  +LL++S AII  AQ+ Q   +++ P    CE  +P + + + ++   +     D   + +++C  G      +++A+A N  +P      +   P +   D T + R            C DPC   S  +TC  L C++
Sbjct:  131 AHTRTKRHATPEGKPFDLTACECAFVVFNNLESRRRCLQDYRHSDWRLTHRFQPKSLRF---------------------------RDGKYALKVLPAPEPSNILWENLEVTPHARRIRRGFTNFVTFLLLLVSGAIISAAQSAQQTFKDKAPPAGLCESALPEIFYASPNYTESSPKLSWDLEWNPNATCTPGDIGDTRYHIAYANNVVNPI-----HVRSPAL---DVTELHR------------CVDPCVSESSSTTCHTLPCFD 351          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: W2PK51_PHYPN (RSN1_7TM domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PK51_PHYPN)

HSP 1 Score: 105 bits (262), Expect = 4.250e-20
Identity = 77/247 (31.17%), Postives = 115/247 (46.56%), Query Frame = 1
Query:  802 PAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQL--CDDPCQRASGGSTCRALSCY 1536
            P  L +   AFV F + ES+RRC++DYR S +    +FQP  L+F                           R  ++ L V  APEPS++ WENL+VT  SR++RR  T+ V  +LL+LS  II  AQ+ Q   +++ P    CE T+P + + + DF LDA +  D   DS+           A  T  DS +  Y     +  ++G      +    +  ++L  C DPC      + C  L+CY
Sbjct:  601 PFDLNACECAFVVFNNLESRRRCIQDYRRSDQWIPHKFQPKSLRF---------------------------RDGKYPLTVLAAPEPSNILWENLEVTARSRRIRRGFTNSVTFLLLLLSGVIISAAQSAQQTFKDKAPPAGLCESTLPEIFYASPDF-LDAKVSWDLEWDSN-----------ATCTPGDSGETRYH----VAYSNGIINDITVDKPTSPVNELHRCTDPCVSEKSSTKCNTLACY 804          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A1W0A0Z3_9STRA (Histidine--tRNA ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0Z3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.090e-19
Identity = 93/342 (27.19%), Postives = 141/342 (41.23%), Query Frame = 1
Query:  553 DKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLGXXXXXXXXXXXXXXXXXXEAPQEALMAATRKKRDPAA-LESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSS--CADGSFYLAFAANATDP-DSSQLDY-DNLPP---------IFSADGTNVSRALFVAANDADQLCDDPCQRASGGSTCRALSCY 1536
            +K ++  W+A V +  P G  L  F+  E  + +I++   +V   +                         +        K+D A  L     A+V FEH ESKRRCL DYR S   + RR+QP  L+F                             Q++ L V  APEPS++ WEN++ T TSR +RR+ T++   VLL+LS  II LA + Q+  Q   P L    + + + +   Y  P   A   D + +SS  C+  SF + +      P     L Y D +PP          F+A  + +   L     D  Q  +DP  +    +    L+CY
Sbjct: 1191 NKMYLDTWIAQVSIATPTGGFLRLFLGMESLMQQIAQQTDIVAAYRNYPAKYGKKLALAEAKLQQLEATMTKKTSKMKALKKDGAKRLAECECAYVVFEHVESKRRCLNDYRTSTTSWKRRWQPKALRFR----------------------------QKYPLIVVSAPEPSNIIWENIETTSTSRFLRRSTTNISTFVLLLLSCGIISLANSSQS--QFNTPVL----QNVCSKILSVYQGPNPPAGSWDLTWNSSKECSSSSFAIEYLNQPPLPFPPGALSYNDRIPPNNLTRCIDTCFNATSSTICGTLPCFTTDKLQTSNDPSNKCEAYTPSNILTCY 1498          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: T0Q5C1_SAPDV (PHM7_cyt domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q5C1_SAPDV)

HSP 1 Score: 103 bits (258), Expect = 1.330e-19
Identity = 83/285 (29.12%), Postives = 130/285 (45.61%), Query Frame = 1
Query:  541 LNTQDKSFVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLGXXXXXXXXXXXXXXXXXXEAPQEALMAATRKKRDPAA-----LESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQE-QIPALDTCEETIPAVVFGTYDF--PLDAALQRDDSMDSSCADGSFYLAFAANATDP 1371
            L+   + ++  +VA+V + +P G +L  F+  E   A+ ++   +++ ++ L                   E   + L   T K ++        L     AFV F   E++RRCL DYR S+    RRFQP +L+F    A                            L V QAPEPS++ WENL+V    R++RR +T+ V  +LL++S A+I LAQ+ QA      IP  + C E +PAV  G Y     L   L  D   +++C  GS+Y+++  N   P
Sbjct:  632 LSHPHEMYLRTYVAEVSIAHPTGGLLRTFLAMEYLTAKAAELNDILKTLQMLPATDAANRAEITTKIEAQLEKVTDTLEKKTSKLKELRENRANNLTDCDCAFVVFNSVEAQRRCLRDYRTSQYSLARRFQPKELRFQGTHA----------------------------LWVQQAPEPSNIIWENLEVPVRERRLRRYLTNFVTFLLLLVSCAVISLAQSAQATFAGGSIP--NFCTEALPAVFTGNYSIISTLKWQLYWDQYPNTTCPTGSYYISYTNNVVVP 886          
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Match: A0A1V9YFM4_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFM4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.240e-19
Identity = 79/270 (29.26%), Postives = 125/270 (46.30%), Query Frame = 1
Query:  562 FVGGWVADVVLGNPVGDVLMGFMDQEEALAEISKARTVVRQMKTLGXXXXXXXXXXXXXXXXXXEAPQEALMAATRKKR----DPAALESISVAFVTFEHEESKRRCLEDYRYSRRGFCRRFQPVKLQFSRKPADEXXXXXXXXXXXXXXXXXXKPRPQRWRLKVFQAPEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAKLQEQ-IPALDTCEETIPAVVFGTYDFPLDAA--LQRDDSMDSSCADGSFYLAF 1350
            +VG ++A+V + +P G +L  F+  E   A++++   ++  +K+                    +          R K       + +E+   AFV F   E+++RCL DYR S   + R FQP  L+F  K                            + L V QAPEPS++ WENL+V+ T R++RR  T+ +  +LL+LS AII LAQ+ QAK     IP  + C E +PAV  G Y    + A  L  +   + +C  GS+Y+ +
Sbjct:  460 YVGTFIAEVSIAHPTGGLLRTFLAMEHLTAKVAELNDILSTLKSPAAEVPDRDKLTTKVEEQLEKVTDTLERKTARMKELRANGASTVEACECAFVVFNSVEAQQRCLRDYRTSGYSYARYFQPKDLRFEGK----------------------------YPLHVRQAPEPSNIMWENLEVSATERRLRRYFTNFITFLLLLLSCAIISLAQSAQAKFSAATIP--NFCSEALPAVFTGNYSTIPNYAWKLYWNQYPNVTCPLGSYYVGY 699          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9251.20837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXS7_ECTSI2.260e-27987.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UMZ3_HETAK8.700e-2736.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662XQF3_9STRA1.510e-2526.86Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XWB5_9STRA4.890e-2425.61Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XIN7_9STRA2.780e-2230.11RSN1_7TM domain-containing protein n=1 Tax=Nothoph... [more]
A0A662XB93_9STRA3.680e-2030.22RSN1_7TM domain-containing protein n=1 Tax=Nothoph... [more]
W2PK51_PHYPN4.250e-2031.17RSN1_7TM domain-containing protein n=10 Tax=Phytop... [more]
A0A1W0A0Z3_9STRA1.090e-1927.19Histidine--tRNA ligase (Fragment) n=1 Tax=Thrausto... [more]
T0Q5C1_SAPDV1.330e-1929.12PHM7_cyt domain-containing protein n=1 Tax=Saprole... [more]
A0A1V9YFM4_9STRA2.240e-1929.26Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9251contigEcto-sp13_S_contig9251:86..6099 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score822.0
Seed ortholog evalue1.5e-235
Seed eggNOG ortholog2880.D7FXS7
Model size1539
KEGG rclassRC02795
KEGG koko:K03015
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
Hectar predicted targeting categorysignal peptide
Exons9
EggNOG OGs28SCF@1,2QZ1Z@2759
Cds size1539
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03019,ko03021,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9251.20837.1prot_Ecto-sp13_S_contig9251.20837.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9251 86..6099 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464196.285926-CDS-Ecto-sp13_S_contig9251:85..3281681464196.285926-CDS-Ecto-sp13_S_contig9251:85..328Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 86..328 -
1681464196.2969234-CDS-Ecto-sp13_S_contig9251:1099..12011681464196.2969234-CDS-Ecto-sp13_S_contig9251:1099..1201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 1100..1201 -
1681464196.3061483-CDS-Ecto-sp13_S_contig9251:1714..18581681464196.3061483-CDS-Ecto-sp13_S_contig9251:1714..1858Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 1715..1858 -
1681464196.3151472-CDS-Ecto-sp13_S_contig9251:2745..28871681464196.3151472-CDS-Ecto-sp13_S_contig9251:2745..2887Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 2746..2887 -
1681464196.3240132-CDS-Ecto-sp13_S_contig9251:3113..32611681464196.3240132-CDS-Ecto-sp13_S_contig9251:3113..3261Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 3114..3261 -
1681464196.3324397-CDS-Ecto-sp13_S_contig9251:3940..40611681464196.3324397-CDS-Ecto-sp13_S_contig9251:3940..4061Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 3941..4061 -
1681464196.3429406-CDS-Ecto-sp13_S_contig9251:4596..47441681464196.3429406-CDS-Ecto-sp13_S_contig9251:4596..4744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 4597..4744 -
1681464196.3508365-CDS-Ecto-sp13_S_contig9251:5168..54861681464196.3508365-CDS-Ecto-sp13_S_contig9251:5168..5486Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 5169..5486 -
1681464196.3602777-CDS-Ecto-sp13_S_contig9251:5926..60991681464196.3602777-CDS-Ecto-sp13_S_contig9251:5926..6099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9251 5927..6099 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9251.20837.1

>prot_Ecto-sp13_S_contig9251.20837.1 ID=prot_Ecto-sp13_S_contig9251.20837.1|Name=mRNA_Ecto-sp13_S_contig9251.20837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=513bp
VAPSVVEYAELGTGASAFGMGVCTVLLCVLSVYAIVEGCGIGRPRKRDTP
LQEWEKGRKQREKNKRKAAASSSKYSAAPGKVIPVETAPDAAPAATGAAD
GYSVIAKEFDGAATADGSAGEMARLEEGAGGGGGGEPGGLTLPLAIPFLS
PAPDAKPPEDPPKQSFHEEQPADSLPCQSCLNTQDKSFVGGWVADVVLGN
PVGDVLMGFMDQEEALAEISKARTVVRQMKTLGKDKKLAKAEAKLAKLKA
KEAPQEALMAATRKKRDPAALESISVAFVTFEHEESKRRCLEDYRYSRRG
FCRRFQPVKLQFSRKPADEEEQQQDGQTPPARRGKKKKPRPQRWRLKVFQ
APEPSDVKWENLDVTPTSRKMRRAVTSLVCVVLLILSFAIIYLAQTEQAK
LQEQIPALDTCEETIPAVVFGTYDFPLDAALQRDDSMDSSCADGSFYLAF
AANATDPDSSQLDYDNLPPIFSADGTNVSRALFVAANDADQLCDDPCQRA
SGGSTCRALSCYE
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mRNA from alignment at Ecto-sp13_S_contig9251:86..6099-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9251.20837.1 ID=mRNA_Ecto-sp13_S_contig9251.20837.1|Name=mRNA_Ecto-sp13_S_contig9251.20837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9251:86..6099- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGCCCCCTCGGTAGTCGAGTACGCGGAACTGGGAACCGGAGCCTCCGC CTTTGGAATGGGCGTGTGCACCGTGCTCCTCTGCGTGCTGTCCGTGTACG CGATCGTGGAAGGGTGCGGCATTGGGCGCCCGAGAAAGAGAGACACGCCT CTGCAGGAATGGGAAAAGGGGAGGTGGGTGCGAGAGGCCACGGAGATGAT CAGGGAAGAGGGGATGAGGGAAAAGGGGAGGAGGGGGCTCAGACAGACGG GACACCAGCGACCAAGGCACACGGAAATATCGATCAGTGGTTTGGTTGCT CCTGGACACGGACGACTAGCGGCGAACGGCAAATTTTGCCCGTGCCCGGG AGAATTGTTTTGACACATAGTTAGTATACGGGGTCATCGGCTTGACCGCA ACATGTGTACCCCAGGTATTGGTAGGGGAAGGGGGGGGGTAGGGGCAATC TTCTTGCTTTGGTAAGGGACGTCCTGCAGGAACCACTCAGTTGTTTTCAA TTTTTTCTTCACTGAACGTGGCGGTTCCGTACTAGAATTACATTCCCTCC ATCACCCACCCGCCGACAAGCTTTCGGCCGCCGTTGCGTCGTGCCCTACC TCTCCAACAACAGGAAGCAGCGGGAGAAGAATAAGAGAAAGGCGGCGGCC TCGTCATCCAAGTATTCAGCCGCTCCGGGAAAGGTCATTCCAGTAGAGAC TGCTCCCGATGCTGCCCCCGCCGCCACCGGCGCAGCCGATGGTTACAGTG TCATCGCCAAGGAGTTCGATGGCGCGGCGACGGCGGATGGGAGTGCGGGG GAGATGGCGAGGTTGGAGGAGGGGGCTGGGGGAGGGGGAGGTGGCGAGCC GGGGGGGTTGACCCTGCCGTTGGCCATACCATTTTTGTCTCCTGCGCCGG ACGCGAAGCCACCCGAAGACCCGCCGAAACAGTAAGAAGGACGGCGCACG CTCGGATGTGGGACGAAATGTGGTGAATGATGACTTCGCAGACACGTTGG CACTGCAGTACGTAAGGTTCGACGTTCTTCTCTCAATCTCAGCGAAACAT GAAACGAACGCAAACACAGCTCCGCTCTGGGAAGGTTCTGAGTGTCCGTG AGTGAGAGTATTGCAGTGCTAAGGGTCAAGGCAGACTAACGACCCACCGC TCCAAGTAGGAGAACGATTGCAACGAGATTCCGCGCACCTAGGAGTAGGT TCGTGAAAAAGATATTTGTATGCATGGTGTAATCGATTGCATTTAGAAGG AGAAAGAAGGAGAACTTTCACTCCCATGAAGGCATTGTCTCTAAACGCAT ACACCCCTATATTTGTGCTGTTGTTGCCGACCGAACGATGCACACACGTG CTCAGGAGCTTCCACGAAGAGCAACCGGCGGACTCTCTGCCCTGCCAGAG CTGCCTAAACACCCAGGACAAGTCTTTCGTAGGCGGATGGGTCGCCGACG TCGTGCTGGGTAACCCCGTAGGGGATGTTCTCATGGGCTTCATGGACCAA GAGGTAATCCATCTTCTTTTAGTTTCTGTGCATGCCAATCAGTTGTCACG TCTCTCAGGACCCGCTCGTTGCCGACATGGCACCGCGTAACTCTCTCAGT GTTTTGTGCTTAGTGCAGGCAGGTGGCACGAGTGGTGTGGTCAGTATCGT CGGGCGGCCGTCTGCATTTCCAAAGTAAACAAACTGTTCGGGTGCTATTT GTAGCAACATCGTTGTTGTGGTTATGGTAGGTGGATCATTGAATGCAGTG ATTCTGAAGAGAGTATCAGTGGAAGCGCCTTGAAAAGTCTCGCCGAGCAG AAATAAGGTCGTCACATCAAGCTCATAGCAGCAACCTTAAACGAAAACAA CAATCAAGAAGGGCCCAAGTTTTTGGAACCGAAAAGGCACCCGACACGCG TACAAGTCACACGTGTCGGCAAGGGCGGGCGTCGATACCGTATGCCCTCA GCCAGGCATTTTTTTTCAGGCCAGAAAGTGTGGTACTTGCTTGGCGCTGA CACACCGCGGTAACGGGCGATACAACACTATCCCTCAGGAAGCGCTAGCC GAGATCAGCAAGGCCCGGACGGTCGTGCGGCAGATGAAGACGCTGGGCAA GGACAAGAAGCTTGCCAAGGCGGAGGCGAAGCTCGCGAAGCTCAAGGCGA AAGAGGCACGTACGCGAAGGGGGAGAGGAACTCGAAAAAGGTTGCACATG TTTATTTATTTATTTAGATAATGGTGGTGCTTTTTGGTGTCCTTTGTAGG ACGAGTGCAAAGCTGTTTGGGAACGCGGCGCGATGGCGTTGGTGGTGCAT GATCGACCGAGAAAGTGGAGAGAGAGAAGTGTTCGGTGGTGTACGGGACA GAGTTGGCAAGGAAAGCAGACCAGACATTAAGATTATCAAAGAAAGTGGC AGTGAGCATTTGGGAAAGCTGAAGGTCAGTCAGGTGAGATGGCAAAGGCG ATAACAGCACTGGTCCTCGGGGTGGTGATACTTAGCAGACAAACCAAGCT GCGGCGATGAACGGATTGGTGTTGGGGGGAAAATTGTGAGCCCAAACTAG CTTTGTGCAAGGCTCCAAGACGGGTACACCTGGGGCTGGGACACGACCGG CGGACAGCGAGCGCATGTCTGCAAAGGCAACGATTGATGTTAGATCGACC TCGACCTGGCGAACAACAATCGCTGGCAAACCTCTCGGCTAGAGGAAAGA CGGACAGCTTTGATCACGTCGCCAATAGAGCTTACGTGCATTCCCGCTTG CAACAAAGCCCTGCAGGCTGCTGGCCCATCCTTTCGTTTCCGCCTCACTC GCCCTTTCCGTCTTGAACAAAAACCCTCTCGCCTCGAGCGCAGGAGGCCC TGATGGCCGCGACCCGCAAAAAGCGAGATCCCGCAGCGTTAGAGTCAATC TCGGTGGCCTTCGTGACCTTCGAACACGAGGAGAGCAAGAGGAGATGCCT GGAGGACTACCGCTACAGCCGAAGGGGCTTCTGCCGGTACGCACGTGGGG AAAGCATGTGGCGTATCCCGCAAGAACCCCCTCCTATCCATCGACCACAA TCCCGAGCGGCCCGAAATAGAGGTGGCATCCCTAGTCCAAAACTCATCGG GGGGATGTTTCCAAGGCTTTTTCAACCGACCGAAAATAGCTACTGACCTA TCGCTGTTTACAATTATCCTCTCTGCTACTCACTTTGCCACTCCGCTTCC TCTGGCTCCCAGGCGGTTTCAACCAGTGAAGCTCCAGTTCTCCCGCAAGC CGGCCGACGAGGAGGAACAACAGCAGGATGGCCAAACGCCGCCTGCCCGC CGGGGAAAAAAGAAGAAACCGCGCCCGCAGAGGTGGCGTCTCAAGGTCTT CCAGGTGAAGCGTAGTCAAACGAAACGCCGATATCGAGTGTACAGTTTCT TGTATGGGCGGGTGAGGGGGATGAGTGTGTGTGTGCTAAGAGGCTGCTCC GGATGTTCCCAACGGAGAAAGGAATGAGGAAGCACAGAGTCCGTGATTTG CTTTCCTTGCATTGTGGCATTGATCTGTACAGAAAGCCCCCCCCCCTCCT CCCCCCCGGTGTTTGCCGTCGGGGTTGGTTTTTGGTCGCTTGGCAATGAC GTTGTAGAACAAGTCGATCGCTTCGTGAGCTCGACAACCAGGTTACCGAT TTCTTTTCGTTTTTATTTTCGGTAATCGTGATGGTGGCGAGTAGAATATG TTGTGCGGGGTCGAGAACCCTCACTCCGTGCAAGGGGGATGATCGCACCA CGTTGGGTAAAATTGGTCAAGCACCCTCGAGGCAGTTACACGGTGCTTCT GTTGTAAATGTCTCTGGAATTGTAAACACCAGATAACATACTAATTAATT CGCAGCAATTCGCAGCCGTCATCCGTGCGCAAGGAAGTAAGCACAAGATG CCGAACACCCTTACCAGGATGAAGCGCACCCTCCACGCGACTCGTCGAAT ACCTCACACCGTTTCGCGCTTGGTGAGAACCTGGCGTGCTCCGTGCTTGT TTTGTGGCGATGTGAGGTCAATGGCCCAACGACTATGGCATGTACGCCAT TGAGTACACTTCCCCCGAGCCCACTCCGTAGCGTTCCTTTGTTTAGACGG TAATCCCGCAGAATATCGACCCGGAGAACTTCGACGACACCTGTAGCAAA CCCACCTGTGGGGCGATCTGAAGGTGGATCAATGTCTTGTAGCTGTATCT GAGAGGCCCTCTGCTTCCTCATGAATTGGAATTACTTCCAGGCCCCGGAA CCCAGCGACGTAAAGTGGGAAAACCTGGACGTAACTCCGACGTCTCGCAA GATGAGGAGGGCCGTCACATCGCTGGTGTGCGTCGTGCTGCTCATCCTCA GCTTCGCCATCATCTACCTCGCCCAGACGGAACAGGTGCGGGAGGAGATC CTACATCGATGCAGGAAAGACGCAAGAGAATACATGGTTGTGGGACCGTC TACTACTACGGAACGGGGAAAGCGTGGGTTCTTGTCCAGCCATTCTTTCT TTCACCGTTCTATCCCCTGACCAAGCCGGGGCAGTTTGTTTCGTCCGAAA TGTTTGCTGCTCCAGACTGTACATTTTCCGGTGGAATGCAATTCTTTTGT TTGCTGGGTAGATTAGCTAAAGGAATCGCAAGTCCTGCAGGCGAGGGGTG CTTATCTTCAGCTTGTGGACACGGGGAATGCCACTCGCGTTTTGCTATGT ACCGGGTTCAGAGTGCGGCTTCATTTAACGCACGGCCACAAACGGTACGA TTTCCGTATACCTGTGGTTCAATGCAGACAGACGTAAAACTGCTTCATAC ACCGGAAGAGCACGATGCCCAAGCCGATCTTGTAGCTATGCCGTATCGTA GCGAACGAAATATTTTCTATGTCATTGCGTGTGTGTCGTATAACATAGGC AAAACTGCAGGAGCAGATCCCGGCGTTGGATACCTGCGAGGAGACGATTC CTGCCGTCGTTTTCGGAACGTACGACTTCCCTCTGGACGCCGCGCTGCAG GTGATCGAATCAGAAGTCGCCGTTGCTGCCGTTCCTGCTGTTGCTCTTGT CTCATGTTCTTGCGTCAACTTACCGGAAGCGTCCAGCCACGTCACCGCTG CTTGTGTGCGTCCGCCTCGTAGCCACCGCCTGGAGCAGCTGACTTCTCGT TGGCCATAAGTCAGATCAGACGCACCGAGGAAAACGTCGAGACACGTGTA CCTTGCGTCAAACCGCTATCCATCCATCGTTCTGTGGCATTTCCACATCG TGATCGGAACCATCCCACGCCCGGGCAGTTAGACCGTCCTGGATTTGTCT AGAGTCAAAAGAGAAATGGTCGAGGAGACCTTGTGTGCACTCGAGCTGAG AGCCCATTTTCGATCAACACCGATGACGTTGCGCCCCGGTGTCTCTTCGA AAACCCACGCACAAACAAGGCGGCAAGTGTATCAGTCAATGGACAGTCAG CGAGTCAGCGCGTTCATCGCCGCATCCCGTTCATGTTCCTCACGTGTCCA GTTCTATCTCGAACACAGCACCCCATGCACCGCGAACTACATAATAGCCT GGAGGCTCAAAACCGTAAGGTAGTTGAACACTGTCAAAATATACCATGAG GAGTGGCGAAAGGGGGCGAAGTTAACAGGTAGACCGAATAACTTGCTCCT TTCACACCCCACTCGCCCAGACGACACAAAAAAACCGCTTCAAGTAACAC ACCGGGCCTCACACACGAAACACCACGCCGAACGCGCCGCACAAAACACC CCGCCAACGTGGCAAAACCAGAGAGACGACTCTATGGACAGCTCCTGCGC GGACGGCAGCTTCTACCTCGCCTTCGCCGCCAACGCCACCGACCCGGACT CGAGCCAGCTGGACTACGACAACCTGCCCCCCATCTTCTCCGCCGACGGG ACCAACGTGTCCCGCGCCTTGTTCGTGGCGGCCAATGACGCGGACCAGCT GTGCGACGACCCTTGCCAGCGGGCGAGCGGCGGCAGCACCTGCCGCGCCC TGTCGTGCTACGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9251:86..6099-

>mRNA_Ecto-sp13_S_contig9251.20837.1 ID=mRNA_Ecto-sp13_S_contig9251.20837.1|Name=mRNA_Ecto-sp13_S_contig9251.20837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9251:86..6099- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGCCCCCTCGGTAGTCGAGTACGCGGAACTGGGAACCGGAGCCTCCGC
CTTTGGAATGGGCGTGTGCACCGTGCTCCTCTGCGTGCTGTCCGTGTACG
CGATCGTGGAAGGGTGCGGCATTGGGCGCCCGAGAAAGAGAGACACGCCT
CTGCAGGAATGGGAAAAGGGGAGGAAGCAGCGGGAGAAGAATAAGAGAAA
GGCGGCGGCCTCGTCATCCAAGTATTCAGCCGCTCCGGGAAAGGTCATTC
CAGTAGAGACTGCTCCCGATGCTGCCCCCGCCGCCACCGGCGCAGCCGAT
GGTTACAGTGTCATCGCCAAGGAGTTCGATGGCGCGGCGACGGCGGATGG
GAGTGCGGGGGAGATGGCGAGGTTGGAGGAGGGGGCTGGGGGAGGGGGAG
GTGGCGAGCCGGGGGGGTTGACCCTGCCGTTGGCCATACCATTTTTGTCT
CCTGCGCCGGACGCGAAGCCACCCGAAGACCCGCCGAAACAGAGCTTCCA
CGAAGAGCAACCGGCGGACTCTCTGCCCTGCCAGAGCTGCCTAAACACCC
AGGACAAGTCTTTCGTAGGCGGATGGGTCGCCGACGTCGTGCTGGGTAAC
CCCGTAGGGGATGTTCTCATGGGCTTCATGGACCAAGAGGAAGCGCTAGC
CGAGATCAGCAAGGCCCGGACGGTCGTGCGGCAGATGAAGACGCTGGGCA
AGGACAAGAAGCTTGCCAAGGCGGAGGCGAAGCTCGCGAAGCTCAAGGCG
AAAGAGGCACCGCAGGAGGCCCTGATGGCCGCGACCCGCAAAAAGCGAGA
TCCCGCAGCGTTAGAGTCAATCTCGGTGGCCTTCGTGACCTTCGAACACG
AGGAGAGCAAGAGGAGATGCCTGGAGGACTACCGCTACAGCCGAAGGGGC
TTCTGCCGGCGGTTTCAACCAGTGAAGCTCCAGTTCTCCCGCAAGCCGGC
CGACGAGGAGGAACAACAGCAGGATGGCCAAACGCCGCCTGCCCGCCGGG
GAAAAAAGAAGAAACCGCGCCCGCAGAGGTGGCGTCTCAAGGTCTTCCAG
GCCCCGGAACCCAGCGACGTAAAGTGGGAAAACCTGGACGTAACTCCGAC
GTCTCGCAAGATGAGGAGGGCCGTCACATCGCTGGTGTGCGTCGTGCTGC
TCATCCTCAGCTTCGCCATCATCTACCTCGCCCAGACGGAACAGGCAAAA
CTGCAGGAGCAGATCCCGGCGTTGGATACCTGCGAGGAGACGATTCCTGC
CGTCGTTTTCGGAACGTACGACTTCCCTCTGGACGCCGCGCTGCAGAGAG
ACGACTCTATGGACAGCTCCTGCGCGGACGGCAGCTTCTACCTCGCCTTC
GCCGCCAACGCCACCGACCCGGACTCGAGCCAGCTGGACTACGACAACCT
GCCCCCCATCTTCTCCGCCGACGGGACCAACGTGTCCCGCGCCTTGTTCG
TGGCGGCCAATGACGCGGACCAGCTGTGCGACGACCCTTGCCAGCGGGCG
AGCGGCGGCAGCACCTGCCGCGCCCTGTCGTGCTACGAG
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