mRNA_Ecto-sp13_S_contig9239.20817.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: D7FW78_ECTSI (Possible ribosome assembly protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW78_ECTSI) HSP 1 Score: 846 bits (2185), Expect = 2.850e-295 Identity = 432/519 (83.24%), Postives = 436/519 (84.01%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMFPNQPPKEALFWGGEDAEYPLLRLRPSTAKNPPAEQKLGTTDTDQGGHEPIGETKEDPTITASSEVDGRGAGKGVALGSIGQGGETPTQEEEDEQAFSTWRVHPRMTPRKDQALQVISTTWDSESAYLFTGDETGRLRCWSLRKVLGALGAEPTRESAAEEGQASSQECETEETEGLGPGGRRDGAGAVAAGEVGSLLRTEVS 1557
TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLIYCA CNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGT+R+WGVKGSPL+GLMVLMFPNQPPKEALFWGGEDAEYPLLRL PSTAKNPP EQKLGTT DQGG EPIGETKED T TA+SEVDGRG GKGVALGSIGQGGETPTQEEEDEQAFSTWRVHPRMTPRKDQALQVISTTWD ESA LFTGDETGRLRCWSLRKVLGALGAE TRESAAEEGQASSQECETE TE LGPGGRRDGAGAVAAGE GSLLRTE S
Sbjct: 454 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLIYCARR------------------------------------------------------------------CNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTIRLWGVKGSPLKGLMVLMFPNQPPKEALFWGGEDAEYPLLRLPPSTAKNPPTEQKLGTTGADQGGQEPIGETKEDTTTTATSEVDGRGVGKGVALGSIGQGGETPTQEEEDEQAFSTWRVHPRMTPRKDQALQVISTTWDPESACLFTGDETGRLRCWSLRKVLGALGAESTRESAAEEGQASSQECETEATESLGPGGRRDGAGAVAAGEAGSLLRTEDS 906
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A836CBJ4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ4_9STRA) HSP 1 Score: 230 bits (587), Expect = 6.200e-62 Identity = 129/303 (42.57%), Postives = 171/303 (56.44%), Query Frame = 1
Query: 28 LWDLRTFHCVQTFQANNDGEMPKD-KASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYS------------------------------------------DDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLA 801
+WD+R CVQT Q + E P + +CF H K+ PL S+QE + RLV+A+GK+L DQ R ++E +TD + CACFN SLT+LTATE+TVK+WDAVGG L+ +FK IT DITA CLDDRERKFILG+A+G V +YN+RNGA MK + + GP+ LIYC +KA+LVA +G + C DE++P+ VL FE G SA + DDL+ YS LVAT++ + DG+ +W F TGR EH+LA
Sbjct: 826 IWDMRRAQCVQTIQLEEEEEGPNGARTPFACFTHCKLTPLWSDQEVVDFRLVVAQGKKLRHLDQARQRSEPVTDTTPIACACFNMGSLTVLTATERTVKVWDAVGGGLRRIFKNITETDITAACLDDRERKFILGDARGGVGIYNYRNGALMKQIPAKPLDGPVVELIYCMPDKALLVA----------RAEGPLYCHDEINPEVCAVLTVFENGVSATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPNGGLDDLSIALYSTSLRLVATATRSASDGVRLWSFATGRVEHILA 1118
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A7S3ZL49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZL49_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.150e-46 Identity = 135/476 (28.36%), Postives = 211/476 (44.33%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWG----------VKGSPLRGLMVLMFPNQPPKEALFWGGEDAEYPLLRLRPSTAKNPPAEQKLGTTDTDQGGHEPIGETKEDPTITASSEVDGRGAGKGVALGSIGQGGETPTQEEEDEQAFSTWRVHPRMTPR-KDQALQVISTTWDSESAYLFTGDETGRLRCWSLRKVLGAL 1395
TAD++GV+KLWDLRTF CVQTFQ + D H K+ Q++ ++R++ A K + FDQYR + + +TDD N +LT+ ++ TVKIWD + G K F IT +DITA CLDDR RKF +G A+G ++ +N+ NGA MK G + + Y KAV+ A G ++ +DE D + L F+ + +L++V GL AT++ +GI W Q + + G V + ++ FL+P+PLL SDG +R+WG + + + G +L F N+PP + + Y L K+P H+P PT+ S +E D+ + + + ++ + V +D+ S +L+ GDE G +RC+ L V+ L
Sbjct: 436 TADTTGVLKLWDLRTFGCVQTFQTEHTKGDLNDMTGFQALTHVKLKAKDPTQDKPDYRVICA-TKNIFFFDQYRTRVDPVTDDLPPRIMLLNDLNLTLFISSLCTVKIWDLILGTRKNTFHNITDSDITAACLDDRRRKFFVGTAEGRMSCHNYANGALMKKFSKINGRVIAMRYDHGRKAVICASL----------QGRIIIYDEKDIEHCYPLRTFDEPYQ-HRQELSHVVLHEGGGLCATTAAESVEGIRFW---ASDQASIDSQLCTRGQV--ILNMGFLEPYPLLWVATSDGRVRIWGCPTRNEKTGKLDTTKVNGCCLLSFANRPP--------DGSCYEFLPEEHDGVKSP---------------HQPR------PTLYPS------------------------WRERRDDCTYGEPTEYTGLPEGVQEHNVPVAVAQFDAFSGHLYLGDELGNVRCFDLSLVIRLL 841
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A024UFV7_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFV7_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.380e-46 Identity = 112/324 (34.57%), Postives = 172/324 (53.09%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMK-----DLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMF 951
TAD GV K+WD+R F C+QTF A N M ++S H+ ++A GKR+ FD + + +TDDF V A FN SLT +TA +KIWDA G L ++KG++G D+TA+CLD+R RKF++G+ +G + VY++ NG MK D+D +A ++ L YC + V+ STS+ D + DE DPD+ ++L GG ++ D+ ++ +S+ L+AT S + + IW + GR + G + + SLVFLDP+PLL + G + +W ++ S +G V F
Sbjct: 423 TADIGGVFKVWDIRNFACMQTFTAENAN----------------MTDIKSFVSVTSHKRLVAGGKRMTLFDYEKLRNPKLTDDFPVFQALFNPISLTFITAAGTDIKIWDANLGKLIRIYKGLSGTDLTALCLDNRSRKFLVGDHEGNIKVYDYLNGTYMKCFAYPDMDNKAHAAEVSRLYYCNEYRTVI--------STSW--DTSVCIHDESDPDRGILLRRMTGG---HTGDITSLGFSYNLSLIATGSVDCT--VQIWDYEFGRLD-----ATCIGHTTGIVSLVFLDPYPLLASCDLSGNVAIWAMRPSKYKGKCVCRF 710
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: W4GFI7_9STRA (EF-hand domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFI7_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.480e-45 Identity = 114/324 (35.19%), Postives = 169/324 (52.16%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMK-----DLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMF 951
TAD GV K+WD+R F C+QTF A N M ++S H+ ++A GKR+ FD + + +TDDF V A FN SLT +TA +KIWDA G L ++K ++ D+TA+CLD+R RKFI+G+ G + VY++ NG MK D D +A ++ L YC + V+ STS+ D + DE DPD+ ++L GG ++ D+ +VA+S+ L+AT S + + IW + GR + G S VA +VFLDP+PLL + G + +W ++ S +G V F
Sbjct: 424 TADIGGVFKVWDIRNFACMQTFTAENAN----------------MSDIKSFVSVTSHKRLVAGGKRMTLFDYEKLRNPKLTDDFPVFQALFNPISLTFITAAGTDIKIWDANLGKLLRIYKALSSTDLTAMCLDNRSRKFIVGDHDGNIKVYDYLNGMYMKCFAYPDTDNKAHVAEVSRLYYCNEYRTVI--------STSW--DTSVCIHDESDPDRGILLRRMTGG---HTGDITSVAFSYNLSLIATGSLDCT--VQIWDYEFGRLD-----ATCVGHTSGVAGIVFLDPYPLLASCDLGGNIAIWAMRPSKYKGKCVCRF 711
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A3R7C0Q6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7C0Q6_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.480e-43 Identity = 113/324 (34.88%), Postives = 166/324 (51.23%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMK-----DLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMF 951
TAD GV K+WD+R F C+QTF A N M ++S H+ ++A GKR+ FD + + +TDDF V A FN SLT +TA +KIWDA G L ++ D+TA+CLD+R RKFI+G+ G + VY++ NG MK D D +A ++ L YC + V+ STS+ D + DE DPD+ ++L GG ++ D+ +VA+S+ L+AT S + + IW + GR + G S VA +VFLDP+PLL + G + +W ++ S +G V F
Sbjct: 82 TADIGGVFKVWDIRNFACMQTFTAENAN----------------MSDIKSFVSVTSHKRLVAGGKRMTLFDYEKLRNPKLTDDFPVFQALFNPISLTFITAAGTDIKIWDANLGKLLRIYNS---TDLTAMCLDNRSRKFIVGDHDGNIKVYDYLNGMYMKCFAYPDTDNKAHVAEVSRLYYCNEYRTVI--------STSW--DTSVCIHDESDPDRGILLRRMTGG---HTGDITSVAFSYNLSLIATGSLDCT--VQIWDYEFGRLD-----ATCVGHTSGVAGIVFLDPYPLLASCDLGGNIAIWAMRPSKYKGKCVCRF 366
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A418BBE4_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BBE4_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.690e-43 Identity = 113/324 (34.88%), Postives = 166/324 (51.23%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMK-----DLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMF 951
TAD GV K+WD+R F C+QTF A N M ++S H+ ++A GKR+ FD + + +TDDF V A FN SLT +TA +KIWDA G L ++ D+TA+CLD+R RKFI+G+ G + VY++ NG MK D D +A ++ L YC + V+ STS+ D + DE DPD+ ++L GG ++ D+ +VA+S+ L+AT S + + IW + GR + G S VA +VFLDP+PLL + G + +W ++ S +G V F
Sbjct: 357 TADIGGVFKVWDIRNFACMQTFTAENAN----------------MSDIKSFVSVTSHKRLVAGGKRMTLFDYEKLRNPKLTDDFPVFQALFNPISLTFITAAGTDIKIWDANLGKLLRIYNS---TDLTAMCLDNRSRKFIVGDHDGNIKVYDYLNGMYMKCFAYPDTDNKAHVAEVSRLYYCNEYRTVI--------STSW--DTSVCIHDESDPDRGILLRRMTGG---HTGDITSVAFSYNLSLIATGSLDCT--VQIWDYEFGRLD-----ATCVGHTSGVAGIVFLDPYPLLASCDLGGNIAIWAMRPSKYKGKCVCRF 641
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A397DE51_9STRA (EF-hand domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE51_9STRA) HSP 1 Score: 173 bits (439), Expect = 9.840e-43 Identity = 113/324 (34.88%), Postives = 166/324 (51.23%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMK-----DLDTQA--GPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSPLRGLMVLMF 951
TAD GV K+WD+R F C+QTF A N M ++S H+ ++A GKR+ FD + + +TDDF V A FN SLT +TA +KIWDA G L ++ D+TA+CLD+R RKFI+G+ G + VY++ NG MK D D +A ++ L YC + V+ STS+ D + DE DPD+ ++L GG ++ D+ +VA+S+ L+AT S + + IW + GR + G S VA +VFLDP+PLL + G + +W ++ S +G V F
Sbjct: 644 TADIGGVFKVWDIRNFACMQTFTAENAN----------------MSDIKSFVSVTSHKRLVAGGKRMTLFDYEKLRNPKLTDDFPVFQALFNPISLTFITAAGTDIKIWDANLGKLLRIYNS---TDLTAMCLDNRSRKFIVGDHDGNIKVYDYLNGMYMKCFAYPDTDNKAHVAEVSRLYYCNEYRTVI--------STSW--DTSVCIHDESDPDRGILLRRMTGG---HTGDITSVAFSYNLSLIATGSLDCT--VQIWDYEFGRLD-----ATCVGHTSGVAGIVFLDPYPLLASCDLGGNIAIWAMRPSKYKGKCVCRF 928
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A485LEF4_9STRA (Aste57867_19412 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEF4_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.590e-42 Identity = 107/312 (34.29%), Postives = 161/312 (51.60%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLD-------TQAGPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVK 915
TAD GV K+WD+R F C+QTF A N M +++ H+ V+A GKR+ FD + + +TDDF V FN SLT ++A +KIWDA G L ++KG++G D+TA+CLD+R RKFI+G+ G + VY++ NG+ MK ++ L YC + V+ STS+ D + DE DP+ ++L GG ++ D+ ++A+SH L+AT S + I IW + GR V G G + VA + FLDP+PLL + G + +W ++
Sbjct: 438 TADIDGVFKVWDIRNFACMQTFSAENAN----------------MTDIKTFASITSHKRVVAGGKRMTIFDYEKLRNPKLTDDFPVFEVLFNPISLTFISAAGTDIKIWDAHLGKLIRIYKGLSGTDLTALCLDNRCRKFIVGDHDGNIKVYDYLNGSYMKSFAYAETNNRAHLAEVSRLYYCNEYRTVI--------STSW--DTTVCIHDESDPEHGILLRRMTGG---HTGDITSLAFSHNLSLIATGSLDCT--IQIWDYEFGRS--VKLDGTCVGHTTGVACVTFLDPYPLLASCDLGGNVCLWAMR 716
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Match: A0A0P1ABD5_PLAHL (Ef hand family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABD5_PLAHL) HSP 1 Score: 171 bits (433), Expect = 6.560e-42 Identity = 107/328 (32.62%), Postives = 167/328 (50.91%), Query Frame = 1
Query: 1 TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSNQEQDEHRLVLARGKRLLPFDQYRCKTEAITDDFAVTCACFNHTSLTILTATEKTVKIWDAVGGILKGVFKGITGADITAVCLDDRERKFILGNAKGEVAVYNFRNGAKMKDLDT-------QAGPIAGLIYCANEKAVLVACQARKTSTSFPQDGDMVCFDEMDPDKAVVLVNFEGGGSAYSDDLNNVAYSHCNGLVATSSCNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTMRMWGVKGSP-LRGLMVLMFPNQ 960
TAD G+ K+WD+R F C+QTF A+N GE+ S + K +LA GK+++ FD + + +TD+ V CA +N SL+ +TAT K VKIWDA G L V++ ++ D+T +CLD RERK I+G+ G + V+++ NG+ MK + L YCA+ +V+ S D + +DE D D+ ++L GG +S D+ +++SH L+A+ S + + +W + GR + G VS + L FLDP PLLL++ + G + W ++ S +G V F NQ
Sbjct: 395 TADVDGIFKVWDIRNFACMQTFTADNVGEVK----SIVSIISSKR--------------ILAAGKKIVKFDYEKLENPHLTDNHPVFCALYNSRSLSFVTATRKNVKIWDARLGKLIRVYRNLSSTDLTTICLDFRERKLIVGDHGGNIHVFDYLNGSHMKSFKNPEIGNGAHTAEVTKLCYCADHMSVI----------SVSWDCSISIYDERDSDRGILLRQISGG---HSMDITALSFSHHLSLLASGSSDCT--LQVWDYEFGRLD-----ATCIGHVSGLLCLQFLDPFPLLLSSDNTGNLCFWAMRPSAQYKGKCVFRFRNQ 684 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9239.20817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9239.20817.1 >prot_Ecto-sp13_S_contig9239.20817.1 ID=prot_Ecto-sp13_S_contig9239.20817.1|Name=mRNA_Ecto-sp13_S_contig9239.20817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=519bp TADSSGVVKLWDLRTFHCVQTFQANNDGEMPKDKASTSCFVHFKMPPLRSback to top mRNA from alignment at Ecto-sp13_S_contig9239:20..6435- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9239.20817.1 ID=mRNA_Ecto-sp13_S_contig9239.20817.1|Name=mRNA_Ecto-sp13_S_contig9239.20817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6416bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9239:20..6435- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9239:20..6435- >mRNA_Ecto-sp13_S_contig9239.20817.1 ID=mRNA_Ecto-sp13_S_contig9239.20817.1|Name=mRNA_Ecto-sp13_S_contig9239.20817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1557bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9239:20..6435- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |