mRNA_Ecto-sp13_S_contig9172.20744.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9172.20744.1
Unique NamemRNA_Ecto-sp13_S_contig9172.20744.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: D8LID9_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID9_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 7.270e-174
Identity = 255/265 (96.23%), Postives = 256/265 (96.60%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGDGEEKVSQQPPSSVGM 855
            MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVA HDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFE+FENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGDGEEK    P    GM
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEDFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGDGEEKA---PAPDAGM 262
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A836CE23_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE23_9STRA)

HSP 1 Score: 379 bits (972), Expect = 2.800e-123
Identity = 183/265 (69.06%), Postives = 216/265 (81.51%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGDGEEKVSQQPPSSVGM 855
            MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQG A LGL S +H VL ALKR+PNE+ + Q+KI K+D +MG++IAGLTADAR LAKYMRTE LNHKYVYGT +QA+RL  DLADMHQR TQSYVRRPYGVGML+A HD TGPHL +T PSGNYFEYVAMAIGARSQSAKTYLEKH+++F    +D+L+KH LKALSGC+TGDKELD   +++AIVG  + FE ++G +LQ ++DAIE+EG+AA P   G+ E       P   G+
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGSACLGLTSKTHAVLCALKRSPNELGSYQEKIMKIDDHMGISIAGLTADARMLAKYMRTEALNHKYVYGTQLQANRLATDLADMHQRCTQSYVRRPYGVGMLIAAHDATGPHLMETSPSGNYFEYVAMAIGARSQSAKTYLEKHYQDFPAASVDDLIKHGLKALSGCITGDKELDVASVSVAIVGAGQAFEEVQGARLQAFLDAIEVEGDAAAPAPAGEPEAPADVPAPMDEGI 265
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A4D9CTI6_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTI6_9STRA)

HSP 1 Score: 355 bits (911), Expect = 3.760e-114
Identity = 174/241 (72.20%), Postives = 207/241 (85.89%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGN 783
            MFRNQYDTDVTVWSPQGRLHQVEYA+EAVKQG  +LGLRS   VVLAALKR+ NE+S+ QKKIFK+D+++G+AI+GLTADARSLAKYMRTE LNHKYVYG+ +QASRLVLD+AD HQR TQSYVRRPYGVG+L+A +DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK+  EFE+   DEL+KHALKALSG   GDKEL  +  ++A+VGKD   E +EGE LQ Y+DAIE+EG+
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDNHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGD 240
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: W7TFX4_9STRA (Proteasome subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFX4_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.700e-112
Identity = 173/241 (71.78%), Postives = 207/241 (85.89%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGN 783
            MFRNQYDTDVTVWSPQGRLHQVEYA+EAVKQG  +LGLRS   VVLAALKR+ NE+S+ QKKIFK+D+++G+AI+GLTADARSLAKYMRTE LNHKYVYG+ +QASRLV+D+AD HQR TQSYVRRPYGVG+L+A +DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK+  EFE+   DEL+KHALKALSG   GDKEL  +  ++A+VGKD   E +EGE LQ Y+DAIE+EG+
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDNHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVVDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGD 240
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A7S3GRX0_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRX0_9STRA)

HSP 1 Score: 348 bits (892), Expect = 1.690e-111
Identity = 166/240 (69.17%), Postives = 202/240 (84.17%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEG 780
            MFRNQYDTDVTVWSPQGRLHQVEYA EAV QG A LGLRS +HVVLAALKR+PNE++A QKKI K+D +MG+A++GLTAD RSL KYMRTE LN+KYVYGT +Q SRLVLDLADMHQ+ TQSYVRRPYGVG+LV  +DQTGPHL+ T PSGNY+EY AMAIG+RSQ+++TYLEK FE F N  LD+L+KHALKAL+  + GD ELD+   ++++VG ++ F+ +EG  LQ Y+DA+ +EG
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYATEAVNQGTACLGLRSKTHVVLAALKRSPNELAANQKKIHKIDDHMGIAMSGLTADGRSLVKYMRTEALNNKYVYGTPIQGSRLVLDLADMHQKCTQSYVRRPYGVGLLVGTYDQTGPHLYLTEPSGNYYEYYAMAIGSRSQTSRTYLEKEFESFGNASLDDLIKHALKALAASLAGDSELDSKNASISMVGANQAFQIIEGPALQKYLDAVAVEG 240
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A067BZB1_SAPPC (Proteasome subunit alpha type n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZB1_SAPPC)

HSP 1 Score: 345 bits (886), Expect = 1.030e-110
Identity = 164/239 (68.62%), Postives = 200/239 (83.68%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSA-PQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIEL 774
            MFRNQYDTDVTVWSPQG LHQ++YAMEAVKQG A LGLRS +HVVLA +KR   E  A PQKK+F++DS+MG+AIAGLTADARSLA++MRTECLNHK+VYG+ +  +RLV D+AD  Q  TQSYVRRPYGVG+LVAG D+ GPHLFQTCPSGNY+EY A+AIGARSQSA+TYLEKHFE F N   D+L+KHAL+ + GC+ G +EL A+ +T+A+VG D+ F  +EG  LQPY+DA+E+
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLRSSTHVVLAGIKRVNAEQLADPQKKLFEIDSHMGMAIAGLTADARSLARFMRTECLNHKFVYGSALPVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKNGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFETFPNSSKDDLIKHALQGIRGCLEGSQELSASNVTIAVVGADQKFILIEGADLQPYIDAVEV 239
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A1V9Z6U9_9STRA (Proteasome subunit alpha type n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6U9_9STRA)

HSP 1 Score: 345 bits (884), Expect = 2.050e-110
Identity = 160/239 (66.95%), Postives = 202/239 (84.52%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRA-PNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIEL 774
            MFRNQYDTDVTVWSPQG LHQ++YAMEAVKQG A LGLRS ++VVLA + R    E++ PQKK+F++D++MG+AIAGL+ADARSLA++MRTECLNHK+VYG+ M  +RLV D+AD  Q  TQSYVRRPYGVG+LVAG D+TGPHLFQTCPSGNY+EY A+AIGARSQSA+TYLEKHF+ F NCD +EL+KHAL+ + GC+ GD+EL    + +A+VG ++ F  +EG +LQPY+DA+E+
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLRSSNYVVLAGIMRVNAEELADPQKKLFEVDTHMGIAIAGLSADARSLARFMRTECLNHKFVYGSAMSVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKTGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFQTFANCDKEELIKHALEGIRGCLEGDQELSIANIAVAVVGLNEAFHVIEGTKLQPYIDAVEV 239
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A7S2XQH4_9STRA (Proteasome subunit alpha type n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQH4_9STRA)

HSP 1 Score: 345 bits (886), Expect = 2.070e-110
Identity = 165/241 (68.46%), Postives = 202/241 (83.82%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQ-TGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEG 780
            MFRNQYDTDVTVWSP+GRL QVEYAME+VKQG A +G+RS SH VL ALKR+ +E+S+ QKKI ++D ++G+ IAGLTADARSLAK+M  ECLNHKYVYGT M +SRLV DLAD HQRTTQ+YVRRPYGVG+LVA +D+ TGPHL+QTCPSGN +EY A AIGARSQS +TYLEKH+E FE    D+L+ HAL+AL+GCVTGD EL  +  ++A+VGK + F  +EG++LQPY+D +ELEG
Sbjct:    1 MFRNQYDTDVTVWSPEGRLLQVEYAMESVKQGSACVGMRSSSHTVLGALKRSVSELSSHQKKIIEIDDHIGIGIAGLTADARSLAKWMMNECLNHKYVYGTPMPSSRLVTDLADRHQRTTQTYVRRPYGVGLLVASYDEKTGPHLYQTCPSGNIYEYYASAIGARSQSGRTYLEKHYESFEEASKDDLIMHALRALAGCVTGDGELTRDNGSIAVVGKGESFILIEGDELQPYLDRLELEG 241
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A6S9F1R3_9STRA (Proteasome subunit alpha type n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9F1R3_9STRA)

HSP 1 Score: 341 bits (875), Expect = 1.070e-108
Identity = 159/240 (66.25%), Postives = 200/240 (83.33%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEG 780
            MFRNQYDTDVTVWSP+GRL QVEYAME+VKQG A LGLRS +H VL ALKR+ +E ++ QKK+ ++D +MG+ IAGLTADAR++AK+MR ECLNHKYVYGT M + RL+ DLAD HQRTTQ+YVRRPYGVG+LVA +D+ GPHL+QTCPSGN +EY A AIGARSQS +TYLEKH+E   +   D+L+ HAL+AL+GCV+GD EL  +  ++A+VGKD+ F  +EG++LQPY+D +ELEG
Sbjct:    1 MFRNQYDTDVTVWSPEGRLLQVEYAMESVKQGSACLGLRSSTHSVLGALKRSVSEHASHQKKLLEIDDHMGIGIAGLTADARTIAKWMRNECLNHKYVYGTPMPSGRLLTDLADKHQRTTQTYVRRPYGVGLLVASYDKNGPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKHYETLNDASRDDLIMHALRALTGCVSGDVELTKDNGSIAVVGKDEKFTLIEGDELQPYLDRLELEG 240
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BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Match: A0A6U3ZK57_9STRA (Proteasome subunit alpha type n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZK57_9STRA)

HSP 1 Score: 340 bits (871), Expect = 2.890e-108
Identity = 162/240 (67.50%), Postives = 196/240 (81.67%), Query Frame = 1 
Query:   61 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEG 780
            MFRN YDTDVTVWSP+GRL QVEYAME+VKQG A + LRS +H V+ ALKR+ +E+SA Q+KI ++D ++G+ IAGLTADAR+LAK+MR ECLNHKYVYGT + + RLV DLAD HQRTTQSYVRRPYGVG+LVA  D+ GPH++QTCPSGN +E  A AIGARSQS +TYLEKH E FE C  D+L+ HALKAL GCV+GD EL     ++AIVGKD+ F  +EGE+LQPY+D +ELEG
Sbjct:    1 MFRNMYDTDVTVWSPEGRLLQVEYAMESVKQGSACIALRSTTHSVIGALKRSVSELSAHQQKILEIDDHLGIGIAGLTADARTLAKWMRNECLNHKYVYGTALPSGRLVTDLADRHQRTTQSYVRRPYGVGLLVASFDKNGPHVYQTCPSGNVYECYATAIGARSQSGRTYLEKHCESFEECSKDDLIMHALKALVGCVSGDGELTRENGSVAIVGKDQKFTLIEGEELQPYLDRLELEG 240
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9172.20744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID9_ECTSI7.270e-17496.23Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A836CE23_9STRA2.800e-12369.06Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A4D9CTI6_9STRA3.760e-11472.20Proteasome subunit alpha type n=1 Tax=Nannochlorop... [more]
W7TFX4_9STRA2.700e-11271.78Proteasome subunit alpha n=1 Tax=Nannochloropsis g... [more]
A0A7S3GRX0_9STRA1.690e-11169.17Proteasome subunit alpha type n=1 Tax=Spumella elo... [more]
A0A067BZB1_SAPPC1.030e-11068.62Proteasome subunit alpha type n=3 Tax=Saprolegniac... [more]
A0A1V9Z6U9_9STRA2.050e-11066.95Proteasome subunit alpha type n=1 Tax=Thraustothec... [more]
A0A7S2XQH4_9STRA2.070e-11068.46Proteasome subunit alpha type n=1 Tax=Attheya sept... [more]
A0A6S9F1R3_9STRA1.070e-10866.25Proteasome subunit alpha type n=1 Tax=Ditylum brig... [more]
A0A6U3ZK57_9STRA2.890e-10867.50Proteasome subunit alpha type n=1 Tax=Skeletonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9172contigEcto-sp13_S_contig9172:1267..6344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score508.8
Seed ortholog evalue1.6e-141
Seed eggNOG ortholog2880.D8LID9
Preferred namePSMA1
Model size2289
KEGG koko:K02725,ko:K13141
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0001530,GO:0001673,GO:0001703,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005839,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0006997,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0007291,GO:0007346,GO:0007349,GO:0007369,GO:0007370,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009506,GO:0009653,GO:0009790,GO:0009896,GO:0009987,GO:0010004,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030054,GO:0030071,GO:0030154,GO:0030163,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043073,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046685,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055044,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0090068,GO:0097159,GO:0097367,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
Exons5
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0863@2759
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-18_004030.1
EC3.4.25.1
Cds size879
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9172.20744.1prot_Ecto-sp13_S_contig9172.20744.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9172 2617..6284 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464188.825466-UTR-Ecto-sp13_S_contig9172:1266..26161681464188.825466-UTR-Ecto-sp13_S_contig9172:1266..2616Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9172 1267..2616 -
1681464188.9067512-UTR-Ecto-sp13_S_contig9172:6284..63441681464188.9067512-UTR-Ecto-sp13_S_contig9172:6284..6344Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9172 6285..6344 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464188.8380039-CDS-Ecto-sp13_S_contig9172:2616..28441681464188.8380039-CDS-Ecto-sp13_S_contig9172:2616..2844Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9172 2617..2844 -
1681464188.8504145-CDS-Ecto-sp13_S_contig9172:3174..32851681464188.8504145-CDS-Ecto-sp13_S_contig9172:3174..3285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9172 3175..3285 -
1681464188.8719168-CDS-Ecto-sp13_S_contig9172:3722..39751681464188.8719168-CDS-Ecto-sp13_S_contig9172:3722..3975Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9172 3723..3975 -
1681464188.8869202-CDS-Ecto-sp13_S_contig9172:5608..58321681464188.8869202-CDS-Ecto-sp13_S_contig9172:5608..5832Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9172 5609..5832 -
1681464188.8965921-CDS-Ecto-sp13_S_contig9172:6221..62841681464188.8965921-CDS-Ecto-sp13_S_contig9172:6221..6284Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9172 6222..6284 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9172.20744.1

>prot_Ecto-sp13_S_contig9172.20744.1 ID=prot_Ecto-sp13_S_contig9172.20744.1|Name=mRNA_Ecto-sp13_S_contig9172.20744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALK
RAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYG
TTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAGHDQTGPHLFQTCPS
GNYFEYVAMAIGARSQSAKTYLEKHFEEFENCDLDELVKHALKALSGCVT
GDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGD
GEEKVSQQPPSSVGMRDHPSRRRRKHVMRATFLLGARVFGGV*
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mRNA from alignment at Ecto-sp13_S_contig9172:1267..6344-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9172.20744.1 ID=mRNA_Ecto-sp13_S_contig9172.20744.1|Name=mRNA_Ecto-sp13_S_contig9172.20744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5078bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9172:1267..6344- (Ectocarpus species13 EcNAP12_S_4_19m)
GATACAACTCCAGCAGAGTCGCGGGCATTTTCGCGCTTGGATTGCGCCTC
GCACGCAGCCATGTTCCGCAATCAGTACGACACGGATGTGACCGTTTGGA
GCCCGCAAGGTCGTCTTCACCAGGTGAGGTGCAGTATGAAACGCCACGGA
CACGAGCCCCACTGTTTTTTTTTTGCCCTAGCGCTTTTCTGTCCCCGCGG
CTACCGGATGCGCTACTGCCGCATCTTTGTAGTTCCTGAGAATCGCGAAC
AGCATGTTCGGCGTGAGGTTGCGAGTCTCTGCATCATGCCGGCCTGTTGT
AGGTTCAGAAACAAGTGATACAACTGTTAGTGCACGCGACACTATTCCGC
ATCGCCTGACCCGCGCTGTACGGAGCCACTCACATAGGCAGCAACAGTCC
AGTCTTTATTTAGGCATGTAGACGTCTTCTTTGCTGCCAAACGAGCTACA
GCCTCTGAGTGAATTTTCACCTTTTACCTTATCTCGAACCCCCCGAATGT
CGGCCTTCCCAGGTTGAATATGCGATGGAGGCGGTGAAGCAGGGGGGGGC
GTCGTTGGGGCTCCGCAGCGGTAGCCACGTGGTTCTGGCGGCCCTGAAGA
GGGCACCGAACGAGATGTCGGCACCGCAAAAGAAAATCTTTAAGCTTGAC
AGCAACATGGGCGTGGCCATCGCGGGGCTCACCGCGGACGCCCGGTCGCT
GGCGAAGTATATGCGAACAGAGTGCCTCAACCACAAGTGAGTCGTTCAGT
TGTCGCGCCACCTTTCCTCGGCGGCATTGGCTGTGTATATCGGGGGCACC
GCTGTCTCGCTCGGATATACCTGCGTCGAATATCGCTCGGGGGTTATGAT
GTGCTGCAGCAACAGCAGCACGTGAAGAGAACTATCAAAAGCACACCCCG
AGGTCAAACACCGTGCCGTATATATCGAGCACAGTAGTTAAACCGGCCAA
GCGATGCCTACCCTTGGCGTTTGAAAACGCGCCTCTTTCAGTCGATGCAT
CGACAGAGACCTCATGAACTGCCGCAGACAAACACAACGGTACATCGGGC
AGACCCTGGCATGATCCTGCAGGATCGCTCAGCGGGTGCACCACCGGTAA
ACGCGTTCCACAGGGGCCAGAATTCCGAGCGCGGAATGTGCTCGAGCAGG
TCATAGCTCAAGAATTCTGGTATTTCGTACTCTTCCATCGTGAAAGTCAG
AACGAGTCGATATCGGTATTGAACTCACTCGCAAAACGACACTCTCACCG
ACCGTCGAGGCTTCACCATTCTCTGTCCCCACACACTTTTGCAAAAATTA
AAAACTCAGTCAACCCAATGCGATAGCCTTCCGCCGGTGGGGCTACCTGA
CCCTCACGCCGATTAAACAGATTACAAAGTACTTGTATATGCTCGTACGC
GCAACAAGGGCGCCGACATGGGCCACTATACTGCGCCGCTCTGTATGCCC
ATCCGTGATCCGCCCCGACCGTACGTTTGCTCTTGCTCGTGACGCCGGCG
CTTTCGCTGCCCCCCCCCCCCTCCGCGGCTTTCCGCGTGTGGTCGCGGGG
GCGTTCCAGCTGGTAGTCCTTTCCACTAGGCTCGAGATGTGATTCCCTTG
CAACACTTTCTCCAAGTCCTTGAACTTCGGCCTCTGCACGCTGTCCGTCG
TGTCCGGCGGTGGACCACCCGCGGATGTGTCACCGGAGGGCACGACAAAA
GGCATGCAGGTACCCAAGTTCAAGGACTGGAAGAAAGTCCTGGAACTGGG
TGACATGTCGAGCCTAGCGGACAGGGCTAGGGGCTAGAACGCGCCCACGT
CTGCAGGCGGCCTCAAGCGTAAAGAGGCAATAGCAGCACATGGAAAGAGA
AACCAAAATCAAAAGCACAATGGAGATCCAAACACGGTGCGGGGAATATT
AAGCACAACAGTTTTACCGGCCAAGCGATGCTTACTCTTGGCCCTTGAAA
ACGCGCCTTTTTCAGTCGATGATTGTGGAAGAGAACTCATGAACTGCCGC
AGAGAAGCACAGCAGTACACTGGGTAGACCCCCGCTGGTTCCTACAGGAT
CGCTCAGCGGATGGTAAACACACTACAACATAGGGGCTAGACACGGAGCG
GGAAGGTGCTGGCCCAGGTTTTTTGGCAAAGAGTGATGACGATTCGTGCC
ACCTCAATGTTTCTGAGAAGAACTTTCATCTCCTGCTTGGCAAACATTTG
CAGCTTGAATTGAAGGCGGTGATTCCAGCCTGAACTACGCACAGCAGAAG
AGAAAGGTACACCTCTTTCCCTTCCCCGCACAAACGTCGCAGAAGAGTGC
GGTTCACACGACAAAGAGGCAGTCAGGTTGTAACCCCTTTTCGTTCCCCG
GGATCACAACGTTTCGCAGGTACGTGTACGGAACCACCATGCAGGCGAGC
CGCTTGGTCCTTGACCTCGCGGACATGCACCAAAGGACCACTCAGAGCTA
CGTCCGCCGGCCGTACGGCGTGGGCATGCTGGTGGCGGGGCACGACCAGA
CGGGGCCGCACCTGTTCCAGACGTGCCCCAGCGGGAACTACTTCGAATAC
GTGGCCATGGCCATCGGCGCGCGATCGCAGTCGGCCAAGACTTACCTCGA
GAAGCACTTCGAGGAATTCGAGGTGAGAGGGTACTGCCGCGCCGCGCCGC
TGGAGTTACCCGTGTTGAAGAGACAGCTTGCCGCAAAAGCGGCGGCAAAA
AGGAGCGTCGTCGTTATTGCAATGACTCCATCCTCGATAACCCCAACTCT
GTGTGAAACCTGCCTGTAGCTGTAGATGCTAAGGCGGGGCTGGGTTGACC
ACCAACGGGCCTCGTCGTTCTTCGGTCGACTCCGTGTTGGTCGGCGGGGG
GATTGGGCAAGCGTGCCGACTGTACAGGTCGGCGAACTTCCAATCTTGAG
AGTTAGCACCGTCTTCCTTTTTTTCTTGTTTTTTATCACTCCAACATACG
TAAAATATCTAGTCCGACGATCACACGCCCTGTCAAGCTTTGCCCACCGG
AAGAATCATTCCCGCATCGTCTGCGTGTTATCCTCCTTGTCGCGAAAAAC
CGCGGGCAGAACTGCGACCTGGACGAGTTGGTCAAGCATGCCTTGAAGGC
GTTATCTGGCTGCGTGACCGGGGACAAGGAGCTGGACGCGAACGGGCTGA
CCCTCGCCATCGTCGGCAAGGTGAGGCGCGCCTGAACGAACTGGTGTTCC
CATGCCTCACCTTCTTGCCGTGTACATTGGTCGGTCTTGTGGAGTACCTC
TCGAATGACGCGGTTGTCTAGGTGCGCCAAATTTGTGTTATTTCGCCGCC
AGTTGTGAACGGTAAATGTAGGGCTGCGATGCCATTGAAGTGTAAACACC
TTTCTTGTCGTGAAACGCCGTTGGACCTCATTCCGCTCCTGGATTGTTGG
GCGGCAAAGCCGGCAACGGTCGACGAAGCATCCGGGCGCATTTCTGACCG
GGCTTTTGGTGTGGCGGCGTCCGTGTCCGTTTTTGTTTTTTGTTGAGTAG
GACAAGGTTTTCGAGTCGCTGGAGGGTGAACAGTTGCAGCCCTACATGGA
TGCCATCGAGCTCGAGGGGAACGCGGCGCAACCCATGGACGAGGGAGACG
GGGAGGAGAAGGTAAGCCAACAACCTCCATCATCGGTGGGCATGCGTGAT
CATCCCTCTCGCAGGAGACGTAAACACGTCATGCGCGCGACATTCCTATT
GGGCGCTCGTGTTTTTGGCGGCGTGTAGAACACTGAAGGAAAATCCGTGC
GACCTCGAAGTATTTTTTTCCGTTCAGGCCAACTAGTGCGCGTGAAAAAA
TGGCCAGCTGGTCATAGTTTCCTCTCGAAGTGCAAGGCAAATGCCAGCTA
TACGTGAGTGGATATCTTAACGGAGCGCCGATGCTCCTATCAACTGAAAT
TTTCCCCTGTTTCACTGTTACTTCACCGCACCTGTGAGAATATATCTAGG
CTAGTCGACGCTAGATACGAACAATACCCACCTTTTGATTTAGTACGCCT
AACTAATGTCTTCACAACCCGGTGACACGTGGTAAGATCCCACATCCAGG
GGGATGGCACTCTTGAATTCGTGGGAAACCGATCGCCGTAGATACGGCAC
AGCATGCTGCCCAAATCGAACCCCCACCCCGGGATATTCGTCCCCAGAGA
CTTCAAGGATGCCATCGCTTCAATGTTAACTTTGATACGAGACCACCTTG
GGTTAGTCTTTTGTCCACCCACTGGAATATCGTCTCTACGGTGTGGTTCC
GTGTCCGAGCGATGCTAGGTCATTGCAGCTCCGACGAATGTCAGCTTTAG
AGTGTCTTCTCATGCAGCACCCATTTGCGTGTCCCGATTCCGACTGTTGT
CCGATTTCTTCAGGCACCGGCTCCGGACGCAGGGGTGGCATGAACGGTGT
GAAGCCCTGGCCAGGAGGTGGCATGCTGTTCCCTGGTGGCAAGAATGGCG
TTTCGTTCTGTTTTGGTCTTCGCACAAGCCGTTTCTGGCTTCTTTTGCTT
TTTTGTTGTCGCGGTCCTATCTTGTTCGTATTGCAGCCGGTGCGTGACGT
TAGGCTCGCTTCGGTGCTGCCAATGAGAGCTTATGGGATCGGGGGGTCGC
GTGAGTACGGTGACCATGCGAAGATGTAACCTGTTGCTGGATAGCTCGAT
GACAAGTGTCCGAAGTTGGCCTGAAATCGTAGGATGGGACGCTCATCTGC
TCCCGTTTTCGTTTGTTGGGCGAGAAAGTGGCGCGCTTGCCAGGGGACGA
GAATGAGAGGCAGTTTTTTTGGTTTGCCTAGAAGCTTGCCGTTGGGGTAC
ATGCTAGCCGCTGTCCTATTTTTGCTCAGAAGGTAGTTTCTCGACGCACA
ACGTGACTTTTTCGCGGATTTTAAAACGTTGTTGAGCCTCGAGCTAGGCA
AAAGAAGCGTCCCACACTTGTGACGGTCCGCTGCTTGACGCGTTGCACCC
ACCTACAACGAGATGAAGTGTGTACTTTTCGTTGGAAAGTACACGACAAG
CCACCCGATAGCGGCCAGCCGAGCAAGCCCACTAAGGAGGTGCGACAGGG
GTTTGTTTGCGGGTACGCGATGTGTGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9172:1267..6344-

>mRNA_Ecto-sp13_S_contig9172.20744.1 ID=mRNA_Ecto-sp13_S_contig9172.20744.1|Name=mRNA_Ecto-sp13_S_contig9172.20744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9172:1267..6344- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTCCGCAATCAGTACGACACGGATGTGACCGTTTGGAGCCCGCAAGG
TCGTCTTCACCAGGTTGAATATGCGATGGAGGCGGTGAAGCAGGGGGGGG
CGTCGTTGGGGCTCCGCAGCGGTAGCCACGTGGTTCTGGCGGCCCTGAAG
AGGGCACCGAACGAGATGTCGGCACCGCAAAAGAAAATCTTTAAGCTTGA
CAGCAACATGGGCGTGGCCATCGCGGGGCTCACCGCGGACGCCCGGTCGC
TGGCGAAGTATATGCGAACAGAGTGCCTCAACCACAAGTACGTGTACGGA
ACCACCATGCAGGCGAGCCGCTTGGTCCTTGACCTCGCGGACATGCACCA
AAGGACCACTCAGAGCTACGTCCGCCGGCCGTACGGCGTGGGCATGCTGG
TGGCGGGGCACGACCAGACGGGGCCGCACCTGTTCCAGACGTGCCCCAGC
GGGAACTACTTCGAATACGTGGCCATGGCCATCGGCGCGCGATCGCAGTC
GGCCAAGACTTACCTCGAGAAGCACTTCGAGGAATTCGAGAACTGCGACC
TGGACGAGTTGGTCAAGCATGCCTTGAAGGCGTTATCTGGCTGCGTGACC
GGGGACAAGGAGCTGGACGCGAACGGGCTGACCCTCGCCATCGTCGGCAA
GGACAAGGTTTTCGAGTCGCTGGAGGGTGAACAGTTGCAGCCCTACATGG
ATGCCATCGAGCTCGAGGGGAACGCGGCGCAACCCATGGACGAGGGAGAC
GGGGAGGAGAAGGTAAGCCAACAACCTCCATCATCGGTGGGCATGCGTGA
TCATCCCTCTCGCAGGAGACGTAAACACGTCATGCGCGCGACATTCCTAT
TGGGCGCTCGTGTTTTTGGCGGCGTGTAG
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