mRNA_Ecto-sp13_S_contig9170.20743.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9170.20743.1
Unique NamemRNA_Ecto-sp13_S_contig9170.20743.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 526 bits (1354), Expect = 3.030e-181
Identity = 265/335 (79.10%), Postives = 285/335 (85.07%), Query Frame = 1
Query:   22 HRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFE---IGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWL---------NRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            H +NKLT  QRLQ+V  V+AGKQRSKVA  +G+T  YI+KLMKPDK+AELHKSRD ELNLDALR PTPVH  LE RLL+WIK+ARARFE   IG SGIMIQTQATKFA E+   DF +SKGWLHRF+KRYG KHINLHGEAGDVDK K EE+IAKIREQLEGFDVELIFNMDETGL F CFPRG ++         NRKTA GSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKN MVFRH+RR PIP      AWLDS++CQ WFDEVFVPFVKKTTGKKV LLWDNCPGH IKNDDPQI+IIFLPPNVTSV+QPMDMGILFALKCQYKTEM
Sbjct:  165 HGQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEM 499          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 479 bits (1234), Expect = 6.490e-165
Identity = 239/294 (81.29%), Postives = 253/294 (86.05%), Query Frame = 1
Query:  145 MKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFE---IGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWL---------NRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            MKPDK+AELHKSRD ELNLDALR PTPVH  LE RLL+WIK+ARARFE   IG SGIMIQTQATKFA E+   DF +SKGWLHRF+KRYG KHINLHGEAGDVDK K EE+IAKIREQLEGFDVELIFNMDETGL F CFPRG ++         NRKTA GSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKN MVFRH+RR PIP      AWLDS++CQ WFDEVFVPFVKKTTGKKV LLWDNCPGH IKNDDPQI+IIFLPPNVTSV+QPMDMGILFALKCQYKTEM
Sbjct:    1 MKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEM 294          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 2.610e-143
Identity = 219/331 (66.16%), Postives = 253/331 (76.44%), Query Frame = 1
Query:   43 IAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFE---IGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWLNR---------KTAGGSKAMKAKDRCTVVACCNTTGSLKVP---LAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            + QRL IV+ V+ G +RS VA +  +   YI+KLM P+KIAEL K RDMELN DALRAP PVH  +E +L KWIKIARARF+   +G SG MIQ QA K A ++  ++FK++ GWL+RF+KRY   H+ LHGEAGDVDK K  E+I +IREQL+ FDV+ IFNMDE GL F CFPRG ++ R         KTA GSKAMKAKDRCTVVACCNTTGSL VP   LAVIST+K  MVFRHVR+PP P      AWLD++ICQ WFDEVFVPFVK  T KKVALLWDNCPGH IK++DPQIVIIFLPPNV SVYQPM+MGILF LKCQYKTEM
Sbjct:    1 MTQRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEM 331          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.460e-136
Identity = 235/468 (50.21%), Postives = 271/468 (57.91%), Query Frame = 1
Query:    4 SKPGSEHRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARF------------------------------------EIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPW-----------------------------------------------------------------------------------------------------LNRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP--------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            +K GS+H +NKLTIAQR +IVEAV+ G+QRSKVA ++ + K Y++KLMKP  IA L K+RD+ELN+ A R PTP+H  LE                                                  ++G SGIMIQTQATKFA E++V++F +S GWLHRF  RYGL HINLHGEAGDV+KA  E++IA+IREQLEGFDVELIFNMDETGL   CFPRG +                                                                                                     LN+KTA GSKAMKAKDRCTVVACCNTTGSLKVPLA+I TAK+ MVFR VR+P  P        AWLDS++CQ WFDEVFVPFVKKTTGKK+ALLWDNCPGH IKNDDPQIVIIFLPPNVTSV+QPMDMGILFALKCQYKT+M
Sbjct:  113 AKSGSDHGENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKM 580          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 1.100e-126
Identity = 204/336 (60.71%), Postives = 226/336 (67.26%), Query Frame = 1
Query:    4 SKPGSEHRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFEIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWL---------NRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKT 966
            +KPGS+H KNKLT+ QRLQIV AV+ G+QRSKVA + G+ K YITKLMKP+ IA L KSRDMELNLDA R PTPVH GLE RL +WIKIAR RFE                                                                   LEGFDVELIFNMD+TGL + CFPRG ++         N+KTA GSKAMKAKD+CTVVACCNTTGSLKVPLAVI TAK+ MVFRHVR+PP P      AWLD+SICQ WFDEVFVPFVK+ TGKKVALLW+NCPGH IKNDDPQIVIIFLPP VTSV+QPMDMG+LFALKCQYKT
Sbjct:  191 AKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVAGDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFE-------------------------------------------------------------------LEGFDVELIFNMDQTGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDQCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQIVIIFLPPKVTSVFQPMDMGVLFALKCQYKT 459          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 1.670e-120
Identity = 191/325 (58.77%), Postives = 226/325 (69.54%), Query Frame = 1
Query:   43 IAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFEIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWL---------NRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            + QRL+IV+ V+ G +RS VA +  +   YI+KLM P+KIAEL K R MELN DALRAP                  +   +IG SG MIQ QA K   ++  ++FK++ GWLHRF+KRY   H+ LHGEAGDVDK K  E+I +IR+ L+ FDVE IF+MDETGL F CFPRG ++         N +T  GSKAMKAKDRCTVVACCNT GSL VPLAVIST+K  +VFR VR+PP P      AWLD++I Q WFDEVFVPFVK  T  KVALLWD  PGH IK++DPQIV+IFLPPNV SVYQPM MGIL  LK QYKTEM
Sbjct:    1 MTQRLKIVKEVQWGAKRSMVAAKWNVGASYISKLMNPEKIAELEKIRHMELNQDALRAP------------------KTATKIGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRGSKAMKAKDRCTVVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPMGMGILLVLKRQYKTEM 307          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 9.430e-114
Identity = 173/229 (75.55%), Postives = 187/229 (81.66%), Query Frame = 1
Query:  286 EIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWLNRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIPAWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            ++G SGIMIQTQA K A E++V+ F +S GWLHRF+ RYGL HINLHGEAGDV+KA  E+KIA+IREQLEGFDVELIFNMDETGL   C    P LN+K A GSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+ MVFRH                 WFD+VFVPFVKKTTGKKVALLWDNCPGH IKNDDPQIVIIFLPPNV SV+QPMDMGILFALKCQYKTEM
Sbjct:    5 KLGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRCSRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHR----------------WFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEM 217          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5KQ75_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ75_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 2.520e-112
Identity = 191/351 (54.42%), Postives = 229/351 (65.24%), Query Frame = 1
Query:    4 SKPGSEHRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKP-----YITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLK--------WIKIARARFEIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPW---------LNRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            +KPGS+H KNK T+ +R +IVE  +   +++ +   H    P                                 A T + +  + + LK           + +   ++G SGIMIQTQATKFA E++V++F +S GWLHRF+ RYGL HINLH EAG+V+KA  E++IA+IREQLEGF+ ELIFNMDETGL   CFPRG +         LN+KTA GSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+ MVFRHVR+P  P      AWLDS++CQ WFDEVFVPFVKKTTGKKVALLWDNCPGH IKNDDPQI              PM+MGILFALKCQYKT+M
Sbjct:   97 AKPGSDHGKNKHTVGKRWKIVEGARL--RQTTMWARHTSAXPAAQVXXXXXXXXXXXXXXXXXXXXXXXXXXQTTARTSIQSASDGKSLKEQADVVLLCYNLLQQTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFLSRYGLVHINLHREAGEVNKAAAEKEIAQIREQLEGFEDELIFNMDETGLFHRCFPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYARKSAWLDSALCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQI--------------PMNMGILFALKCQYKTDM 431          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 8.590e-109
Identity = 173/264 (65.53%), Postives = 194/264 (73.48%), Query Frame = 1
Query:  286 EIGFSGIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDV---------------------------------DKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPW---------LNRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIP------AWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMG 933
            ++G SGIMI+TQATKFA EI+V++F +S GWLHRF+ RYGL HINLHGEAGD                                  +KA  E++IA+I EQL+GFDVELIFNM+ETGL   CFPRG +         LN+KTA GSKAMKAKDRCTVV+CCNTTGSLKVPLAVI TAK+ MVFRHVR+P  P       WLDSS+CQ WFDEVFVPFVKKTTGKKVALLWDNCPGH IKNDDPQIVIIFLPPNVTSV+QPMDMG
Sbjct:    5 KLGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMG 268          
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 7.920e-107
Identity = 188/360 (52.22%), Postives = 220/360 (61.11%), Query Frame = 1
Query:    4 SKPGSEHRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMKPDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFEIG--FSGIMIQT--------------------------QATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDKAKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGP---------WLNRKTAGGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIPAWLDSSICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPNVTSVYQPMDMGILFALKCQYKTEM 972
            SKPG    KNKL++ QRL+IV+ V+ G +RS VA +  +   Y +K M P+KIAEL K RDMELN DALRAP PVH  +E +L KWIKIARARF++   F+ +M  +                          QA K A ++  ++FK++ GWLHRF+KRY   H+ LHGEAGDVDK K  E+  +IREQL+ FDVE I NMDETGL F CFPRG           +N KTA GSKAM AKDRCTVVACCNTTGS   PLAVIST+K  MVFR V                                  A LWDNCPGH IK++DP IVI FLPP V SVYQPMDM ILF LKCQYKTEM
Sbjct:   83 SKPGRNTGKNKLSMTQRLRIVKEVQGGTKRSMVAAKWSVGTWYTSKFMNPEKIAELKKIRDMELNQDALRAPRPVHDEVEEKLRKWIKIARARFDVSTHFALVMCWSGYNLVAYTPITFRPYTSSHSRPSCWAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEFERIREQLQEFDVEFICNMDETGLFFRCFPRGTRVTRGEAAAGVNSKTARGSKAMNAKDRCTVVACCNTTGSQMAPLAVISTSKKPMVFRQV----------------------------------AFLWDNCPGHKIKSNDPHIVINFLPPYVNSVYQPMDMSILFVLKCQYKTEM 408          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9170.20743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV64_9PHAE3.030e-18179.10HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JEY2_9PHAE6.490e-16581.29HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5JNS8_9PHAE2.610e-14366.16HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KA74_9PHAE1.460e-13650.21HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JYC6_9PHAE1.100e-12660.71DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K051_9PHAE1.670e-12058.77HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JLK3_9PHAE9.430e-11475.55HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KQ75_9PHAE2.520e-11254.42HTH CENPB-type domain-containing protein (Fragment... [more]
A0A6H5JV34_9PHAE8.590e-10965.53HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K0Y4_9PHAE7.920e-10752.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9170contigEcto-sp13_S_contig9170:3042..4268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop0
Start0
Seed ortholog score187.6
Seed ortholog evalue9.4e-45
Seed eggNOG ortholog6669.EFX68856
Model size984
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Jerky protein homolog-like
EggNOG OGs38HJW@33154,3BCG5@33208,3CXR0@33213,420II@6656,KOG3105@1,KOG3105@2759
Cds size984
COG Functional cat.BD
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464188.7644079-CDS-Ecto-sp13_S_contig9170:3041..33291681464188.7644079-CDS-Ecto-sp13_S_contig9170:3041..3329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9170 3042..3329 +
1681464188.7769916-CDS-Ecto-sp13_S_contig9170:3529..38091681464188.7769916-CDS-Ecto-sp13_S_contig9170:3529..3809Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9170 3530..3809 +
1681464188.787198-CDS-Ecto-sp13_S_contig9170:3834..40001681464188.787198-CDS-Ecto-sp13_S_contig9170:3834..4000Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9170 3835..4000 +
1681464188.7980766-CDS-Ecto-sp13_S_contig9170:4018..42681681464188.7980766-CDS-Ecto-sp13_S_contig9170:4018..4268Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9170 4019..4268 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9170.20743.1prot_Ecto-sp13_S_contig9170.20743.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9170 3042..4268 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9170.20743.1

>prot_Ecto-sp13_S_contig9170.20743.1 ID=prot_Ecto-sp13_S_contig9170.20743.1|Name=mRNA_Ecto-sp13_S_contig9170.20743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp
ASKPGSEHRKNKLTIAQRLQIVEAVKAGKQRSKVAEEHGITKPYITKLMK
PDKIAELHKSRDMELNLDALRAPTPVHTGLETRLLKWIKIARARFEIGFS
GIMIQTQATKFALEIDVSDFKSSKGWLHRFIKRYGLKHINLHGEAGDVDK
AKTEEKIAKIREQLEGFDVELIFNMDETGLVFHCFPRGPWLNRKTAGGSK
AMKAKDRCTVVACCNTTGSLKVPLAVISTAKNLMVFRHVRRPPIPAWLDS
SICQWWFDEVFVPFVKKTTGKKVALLWDNCPGHIIKNDDPQIVIIFLPPN
VTSVYQPMDMGILFALKCQYKTEMWRDL
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mRNA from alignment at Ecto-sp13_S_contig9170:3042..4268+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9170.20743.1 ID=mRNA_Ecto-sp13_S_contig9170.20743.1|Name=mRNA_Ecto-sp13_S_contig9170.20743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1227bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9170:3042..4268+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGTCGAAGCCCGGATCAGAGCACAGGAAAAACAAGCTCACGATCGCGCA GCGGTTGCAGATCGTTGAGGCCGTCAAAGCTGGCAAGCAAAGGAGCAAAG TTGCGGAGGAGCACGGCATCACCAAGCCCTACATCACCAAGTTGATGAAA CCCGACAAGATCGCCGAGCTTCACAAGTCCCGTGATATGGAGCTCAACCT GGACGCCCTTCGCGCACCAACGCCGGTGCACACGGGTCTGGAAACCCGCT TGCTCAAATGGATCAAGATTGCTCGAGCACGATTCGAGGTAAGGGCGAGC TTTTCTGTCCACTCCTTGCTGTCCCTGTCTCTAACACACTAGCTGGCATG TTTTGTGGTTGAATGTTCTCACATGATACCGTAGATCGCCCACCTGACCG CCTGGATAGATTCGAACCAAGAACAAACCCTGAAACACGTCGCTGCTGCT GCTGCTGCTGCTGCTTTAACTACATGCAGACAACCAAGATTGGGTTCAGT GGTATCATGATACAGACCCAGGCCACGAAGTTCGCGCTGGAGATAGACGT GTCCGACTTCAAGTCAAGCAAGGGCTGGCTACATCGCTTCATCAAACGCT ACGGCTTGAAGCACATCAACCTGCACGGGGAAGCTGGCGACGTGGACAAG GCGAAGACTGAGGAGAAGATCGCGAAGATTCGGGAGCAGCTGGAGGGGTT CGACGTCGAGCTGATCTTCAATATGGACGAGACGGGGCTTGTCTTCCACT GCTTCCCGAGAGGCCCATGTCACGAGATCAGAGGACGCTGCAGGGCTGAA CAGGAAAACGGCGGGAGGTTCGAAGGCCATGAAGGCCAAGGACCGATGCA CGGTTGTGGCCTGCTGCAACACCACCGGCTCGCTCAAGGTGCCGCTGGCC GTCATCAGCACGGCGAAAAACCTGATGGTTTTCCGCCATGTTCGCAGACC ACCAATCCCGTACTACGCCTAGGCAAGTGCCTGGCTCGATTCGTCAATCT GCCAGTGGTGGTTCGATGAGGTCTTCGTCCCCTTTGTCAAGAAGACGACA GGGAAGAAGGTGGCTCTCTTGTGGGACAACTGCCCCGGCCACATCATCAA GAACGACGACCCGCAAATTGTGATCATTTTCCTGCCCCCCAACGTCACGT CCGTCTATCAGCCCATGGACATGGGAATTCTGTTTGCCCTAAAGTGCCAG TATAAGACCGAGATGTGGCGAGACTTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9170:3042..4268+

>mRNA_Ecto-sp13_S_contig9170.20743.1 ID=mRNA_Ecto-sp13_S_contig9170.20743.1|Name=mRNA_Ecto-sp13_S_contig9170.20743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=984bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9170:3042..4268+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGTCGAAGCCCGGATCAGAGCACAGGAAAAACAAGCTCACGATCGCGCA
GCGGTTGCAGATCGTTGAGGCCGTCAAAGCTGGCAAGCAAAGGAGCAAAG
TTGCGGAGGAGCACGGCATCACCAAGCCCTACATCACCAAGTTGATGAAA
CCCGACAAGATCGCCGAGCTTCACAAGTCCCGTGATATGGAGCTCAACCT
GGACGCCCTTCGCGCACCAACGCCGGTGCACACGGGTCTGGAAACCCGCT
TGCTCAAATGGATCAAGATTGCTCGAGCACGATTCGAGATTGGGTTCAGT
GGTATCATGATACAGACCCAGGCCACGAAGTTCGCGCTGGAGATAGACGT
GTCCGACTTCAAGTCAAGCAAGGGCTGGCTACATCGCTTCATCAAACGCT
ACGGCTTGAAGCACATCAACCTGCACGGGGAAGCTGGCGACGTGGACAAG
GCGAAGACTGAGGAGAAGATCGCGAAGATTCGGGAGCAGCTGGAGGGGTT
CGACGTCGAGCTGATCTTCAATATGGACGAGACGGGGCTTGTCTTCCACT
GCTTCCCGAGAGGCCCATGGCTGAACAGGAAAACGGCGGGAGGTTCGAAG
GCCATGAAGGCCAAGGACCGATGCACGGTTGTGGCCTGCTGCAACACCAC
CGGCTCGCTCAAGGTGCCGCTGGCCGTCATCAGCACGGCGAAAAACCTGA
TGGTTTTCCGCCATGTTCGCAGACCACCAATCCCTGCCTGGCTCGATTCG
TCAATCTGCCAGTGGTGGTTCGATGAGGTCTTCGTCCCCTTTGTCAAGAA
GACGACAGGGAAGAAGGTGGCTCTCTTGTGGGACAACTGCCCCGGCCACA
TCATCAAGAACGACGACCCGCAAATTGTGATCATTTTCCTGCCCCCCAAC
GTCACGTCCGTCTATCAGCCCATGGACATGGGAATTCTGTTTGCCCTAAA
GTGCCAGTATAAGACCGAGATGTGGCGAGACTTG
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