mRNA_Ecto-sp13_S_contig9106.20665.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI) HSP 1 Score: 437 bits (1124), Expect = 1.660e-150 Identity = 206/209 (98.56%), Postives = 208/209 (99.52%), Query Frame = 3
Query: 3 WGNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 629
WGNGCFWHVQ EMI+AEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHN+RGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM
Sbjct: 87 WGNGCFWHVQREMIRAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNMRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 295
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A6U3BKH7_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BKH7_9EUKA) HSP 1 Score: 230 bits (586), Expect = 5.030e-69 Identity = 109/212 (51.42%), Postives = 144/212 (67.92%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIK---QEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 629
G GCFWHVQHEM++ E+ +L R +LTS GY G KK G K+CYHN+R + DYG+ G AEVV+V IP S L +FSK YF++FVKY+ G +DR DPQD+G EYRS+LG+PGG+ PM ++ +E +L EG+G +PDTL++ V+VMD+ FPF E+YHQFH+D S YG+ YNNLR +EG + ETGCPE +
Sbjct: 100 GCGCFWHVQHEMVELEEKVLSRRGKQLTSLTGYAGGKKLGDGGKVCYHNMRQVADYGRLGHAEVVNVNIPRSNLKDFSKRYFELFVKYEL-PGVTIVDRADPQDKGPEYRSVLGIPGGVRSPMFAEVEAACKEVLGSEWSLMEGHGNEPDTLLKRRVYVMDSNKFPFHPAEVYHQFHDDFQSPPYGKDYNNLRAVMKKEGRISETGCPEGML 310
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S0AHU9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHU9_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.050e-68 Identity = 104/208 (50.00%), Postives = 139/208 (66.83%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
G GCFWH+QHE ++AE+ +LGR ELTS GY G K + ++CYHN + I DYGK G EVV + +P S + +F+K YFD+F +R DP DRGGEYRSL+G+PGG++ P ++ A A+G+ L EG G DPDTL R V+V DTA FPF++GE YHQFHND S YG+KYN+L K+ E+G ++ TGCP++
Sbjct: 58 GVGCFWHIQHEFVEAERKLLGRGDKELTSLTGYAGGKSTDKEGRVCYHNFQSIADYGKLGHGEVVGMKLPESSIGDFAKEYFDLFTPKG--------ERVDPMDRGGEYRSLIGLPGGVNHPRYAEVEAAATAKGMKLEEGKGNDPDTLGRKLVYVYDTAKFPFYQGEAYHQFHNDFQSPAYGKKYNDLAKEAVEDGRVKVTGCPDRI 257
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A8J5XES5_DIALT (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XES5_DIALT) HSP 1 Score: 221 bits (563), Expect = 4.860e-66 Identity = 109/218 (50.00%), Postives = 143/218 (65.60%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKFM*CEGAALGF 656
G GCFWHVQHE ++ E+++L R+ EL+S GY + K+CYHNLRG+ DYGK G AE V++ IP S LP+F+K YF +FV Y+ GR +R DPQDRG EYRS+LG+PGG+ I++ A + L EG G +PDTL++ TV+VMD+ FPFF E YHQFHND S YGR YN+LR+Q A+ G + +TGCP G +GF
Sbjct: 68 GCGCFWHVQHEFVQLERSLLKRADLELSSRCGYAAGSLLGENGKVCYHNLRGVADYGKLGHAEAVAMRIPPSALPDFAKLYFSLFVSYNLLPGREIFERADPQDRGPEYRSVLGLPGGVRSVYFAQIER-ANGNKMKLVEGKGDEPDTLLKRTVYVMDSDEFPFFPAEPYHQFHNDFQSPPYGRVYNDLRQQLADAGKLPDTGCP-------GGPIGF 277
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S1GME3_CYCTE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME3_CYCTE) HSP 1 Score: 219 bits (559), Expect = 1.170e-65 Identity = 99/208 (47.60%), Postives = 142/208 (68.27%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
G GCFWH+QHE I+AE++ILGR+ EL++ AGY G K + ++CYHN +GI DYG+ G EVV + +P +K+ +F+K YFD+F NG +R DP DRGGEYRSL+G+PGG++ P+ +++ A+G+ L G G DPDT+ + V+V DT+ FPF++ E+YHQFH+D S YGR YN + E+G +Q TGCP++
Sbjct: 63 GVGCFWHIQHEFIEAERSILGRTNKELSALAGYAGGSKTGKEGRVCYHNFQGIADYGRLGHGEVVGMKLPEAKISDFAKVYFDLFR---NG------ERVDPMDRGGEYRSLIGLPGGMNHPLYPEVEKAGIAKGMKLVAGKGNDPDTIGKKLVYVYDTSEFPFYQAEVYHQFHDDFQSRPYGRSYNYIVNDLLEDGRIQGTGCPDRI 261
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S2L8U9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L8U9_9STRA) HSP 1 Score: 220 bits (560), Expect = 2.030e-65 Identity = 105/208 (50.48%), Postives = 138/208 (66.35%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
G GCFWH+QHE + AEQ +LGR+ ELTS GY G K G K+CYHN DYGK G EVV +TIP + + +F+K YFD+F +R DP D+GGEYRSLLG+PGG S PM ++ AAA+G+ L G G DPDTL + V+VMD+ FPF++ E+YHQFHND S YG+ YN+L K ++G +++TGCP++F
Sbjct: 89 GVGCFWHIQHEFVVAEQRLLGRNGKELTSRTGYAGGTKTENG-KVCYHNFSFQADYGKLGHGEVVGMTIPEASIGDFAKEYFDLFTSKG--------ERVDPMDKGGEYRSLLGLPGGTSHPMYPQVEAAAAAKGMTLALGKGNDPDTLGKKLVYVMDSNKFPFYQAEVYHQFHNDFQSPAYGKAYNDLVKDAFDDGRVKDTGCPDRF 287
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S4K336_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K336_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.030e-64 Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
G GCFWH+QHE + AE+ +LGRS ELTS GY G K G K+CYHNL+ + DYGK G EVV +TIP S + +F+K YF F NG +R DP DRGGEYRSL+G+PGG S P +++ A+A+G+ L G G DPDT + V+V DTA +PF++GE+YHQFHND S YG+ YN L ++G + TGCP++
Sbjct: 84 GVGCFWHIQHEFVLAERNLLGRSDKELTSRTGYAGGTKTGDGGKVCYHNLQFVADYGKLGHGEVVGMTIPESSIGDFAKEYFSYFAP--NG------ERVDPGDRGGEYRSLIGLPGGTSHPEYSKVEEAASAKGMRLEPGKGNDPDTFGKKLVYVYDTAKYPFYQGEVYHQFHNDFQSPPYGKAYNKLADMAFDDGRLGVTGCPDR 282
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S0Q9J3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0Q9J3_9CRYP) HSP 1 Score: 216 bits (549), Expect = 1.720e-64 Identity = 104/204 (50.98%), Postives = 132/204 (64.71%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCP 617
G GCFWHVQH + AE ILGRS E T+ AGY G+K + K+CYHN+ G DYG+ G +E V + IPS K+ EF+K +F++ V + R DPQDRG EYRS++G+PGG+S P + EAAARG+ L G GGDPDTL R TV+V D+ FP +GE++HQFH+DMSE YG YN LR G + TGCP
Sbjct: 36 GAGCFWHVQHALALAEGKILGRSPQEYTAVAGYAGSKAVGRDGKVCYHNIAGDSDYGQLGYSEAVGLQIPSDKISEFAKPFFNLLVDGE---------RADPQDRGPEYRSIIGLPGGMSSPDFPAFQAEAAARGMTLARGAGGDPDTLGRRTVYVYDSDAFPLHQGEVFHQFHDDMSERYGAAYNALRGGAVRRGALVPTGCP 230
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S2M6J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6J5_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.770e-63 Identity = 101/208 (48.56%), Postives = 137/208 (65.87%), Query Frame = 3
Query: 3 WGNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHND-MSEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
WG GC+WHVQHE I AE++ILGR +ELTS GY G K ++CYHN + I DYGK G EVV +TIP SK+ +F+ YF +F D G +R DP D+GGEYRSLLG+PGG P ++ ARG+ L +G G DPDTL + V+V D+ FPF++ E YHQ+HND ++ YG++YNNL + ++G ++ TGCP++
Sbjct: 71 WGAGCYWHVQHEFILAERSILGRKDNELTSLTGYAGGFKTDSEGRVCYHNFQSIADYGKFGHGEVVGMTIPESKVEDFAVEYFKLFG--DKG------ERADPMDKGGEYRSLLGLPGGSKHPAFAQVEAAGKARGMTLVDGKGNDPDTLGKRLVYVYDSNKFPFYQAEFYHQYHNDFLTPAYGKEYNNLAEAALDDGRIKITGCPDR 270
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S1YW62_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YW62_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.460e-60 Identity = 95/207 (45.89%), Postives = 134/207 (64.73%), Query Frame = 3
Query: 6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
G GCFWH+QHE ++AE+ ILGR+ ++TS GY G K + ++CYHN +G+ DYGK G EVV + IP+ + +F+K YF F +R DP DRGGEYR LLG+PGG PM +++ A A+ L G G + DT+ R V+V DTATFPF++ E+YHQFH+D S YG+KYN+L + ++G ++ TGCP++
Sbjct: 74 GVGCFWHIQHEFVQAERTILGRTDAQITSRTGYAGGTKADKEGRVCYHNFQGVADYGKLGHGEVVGMKIPTENIGDFAKEYFSYFSTKTG-------ERVDPMDRGGEYRYLLGLPGGTKHPMYAQVEEAATAKNFKLEVGKGNEGDTIGRRIVYVYDTATFPFYQAEVYHQFHDDFQSPAYGKKYNSLAQMAFDDGRLKITGCPDR 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9106.20665.1 >prot_Ecto-sp13_S_contig9106.20665.1 ID=prot_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp MIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAback to top mRNA from alignment at Ecto-sp13_S_contig9106:2719..5180- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9106.20665.1 ID=mRNA_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9106:2719..5180- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9106:2719..5180- >mRNA_Ecto-sp13_S_contig9106.20665.1 ID=mRNA_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9106:2719..5180- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |