mRNA_Ecto-sp13_S_contig9106.20665.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9106.20665.1
Unique NamemRNA_Ecto-sp13_S_contig9106.20665.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.660e-150
Identity = 206/209 (98.56%), Postives = 208/209 (99.52%), Query Frame = 3
Query:    3 WGNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 629
            WGNGCFWHVQ EMI+AEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHN+RGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM
Sbjct:   87 WGNGCFWHVQREMIRAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNMRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 295          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A6U3BKH7_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BKH7_9EUKA)

HSP 1 Score: 230 bits (586), Expect = 5.030e-69
Identity = 109/212 (51.42%), Postives = 144/212 (67.92%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIK---QEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKFM 629
            G GCFWHVQHEM++ E+ +L R   +LTS  GY G KK   G K+CYHN+R + DYG+ G AEVV+V IP S L +FSK YF++FVKY+   G   +DR DPQD+G EYRS+LG+PGG+  PM   ++   +E      +L EG+G +PDTL++  V+VMD+  FPF   E+YHQFH+D  S  YG+ YNNLR    +EG + ETGCPE  +
Sbjct:  100 GCGCFWHVQHEMVELEEKVLSRRGKQLTSLTGYAGGKKLGDGGKVCYHNMRQVADYGRLGHAEVVNVNIPRSNLKDFSKRYFELFVKYEL-PGVTIVDRADPQDKGPEYRSVLGIPGGVRSPMFAEVEAACKEVLGSEWSLMEGHGNEPDTLLKRRVYVMDSNKFPFHPAEVYHQFHDDFQSPPYGKDYNNLRAVMKKEGRISETGCPEGML 310          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S0AHU9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHU9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.050e-68
Identity = 104/208 (50.00%), Postives = 139/208 (66.83%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
            G GCFWH+QHE ++AE+ +LGR   ELTS  GY G K   +  ++CYHN + I DYGK G  EVV + +P S + +F+K YFD+F            +R DP DRGGEYRSL+G+PGG++ P    ++  A A+G+ L EG G DPDTL R  V+V DTA FPF++GE YHQFHND  S  YG+KYN+L K+  E+G ++ TGCP++ 
Sbjct:   58 GVGCFWHIQHEFVEAERKLLGRGDKELTSLTGYAGGKSTDKEGRVCYHNFQSIADYGKLGHGEVVGMKLPESSIGDFAKEYFDLFTPKG--------ERVDPMDRGGEYRSLIGLPGGVNHPRYAEVEAAATAKGMKLEEGKGNDPDTLGRKLVYVYDTAKFPFYQGEAYHQFHNDFQSPAYGKKYNDLAKEAVEDGRVKVTGCPDRI 257          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A8J5XES5_DIALT (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XES5_DIALT)

HSP 1 Score: 221 bits (563), Expect = 4.860e-66
Identity = 109/218 (50.00%), Postives = 143/218 (65.60%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKFM*CEGAALGF 656
            G GCFWHVQHE ++ E+++L R+  EL+S  GY       +  K+CYHNLRG+ DYGK G AE V++ IP S LP+F+K YF +FV Y+   GR   +R DPQDRG EYRS+LG+PGG+       I++ A    + L EG G +PDTL++ TV+VMD+  FPFF  E YHQFHND  S  YGR YN+LR+Q A+ G + +TGCP       G  +GF
Sbjct:   68 GCGCFWHVQHEFVQLERSLLKRADLELSSRCGYAAGSLLGENGKVCYHNLRGVADYGKLGHAEAVAMRIPPSALPDFAKLYFSLFVSYNLLPGREIFERADPQDRGPEYRSVLGLPGGVRSVYFAQIER-ANGNKMKLVEGKGDEPDTLLKRTVYVMDSDEFPFFPAEPYHQFHNDFQSPPYGRVYNDLRQQLADAGKLPDTGCP-------GGPIGF 277          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S1GME3_CYCTE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME3_CYCTE)

HSP 1 Score: 219 bits (559), Expect = 1.170e-65
Identity = 99/208 (47.60%), Postives = 142/208 (68.27%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
            G GCFWH+QHE I+AE++ILGR+  EL++ AGY G  K  +  ++CYHN +GI DYG+ G  EVV + +P +K+ +F+K YFD+F    NG      +R DP DRGGEYRSL+G+PGG++ P+   +++   A+G+ L  G G DPDT+ +  V+V DT+ FPF++ E+YHQFH+D  S  YGR YN +     E+G +Q TGCP++ 
Sbjct:   63 GVGCFWHIQHEFIEAERSILGRTNKELSALAGYAGGSKTGKEGRVCYHNFQGIADYGRLGHGEVVGMKLPEAKISDFAKVYFDLFR---NG------ERVDPMDRGGEYRSLIGLPGGMNHPLYPEVEKAGIAKGMKLVAGKGNDPDTIGKKLVYVYDTSEFPFYQAEVYHQFHDDFQSRPYGRSYNYIVNDLLEDGRIQGTGCPDRI 261          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S2L8U9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L8U9_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.030e-65
Identity = 105/208 (50.48%), Postives = 138/208 (66.35%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEKF 626
            G GCFWH+QHE + AEQ +LGR+  ELTS  GY G  K   G K+CYHN     DYGK G  EVV +TIP + + +F+K YFD+F            +R DP D+GGEYRSLLG+PGG S PM   ++  AAA+G+ L  G G DPDTL +  V+VMD+  FPF++ E+YHQFHND  S  YG+ YN+L K   ++G +++TGCP++F
Sbjct:   89 GVGCFWHIQHEFVVAEQRLLGRNGKELTSRTGYAGGTKTENG-KVCYHNFSFQADYGKLGHGEVVGMTIPEASIGDFAKEYFDLFTSKG--------ERVDPMDKGGEYRSLLGLPGGTSHPMYPQVEAAAAAKGMTLALGKGNDPDTLGKKLVYVMDSNKFPFYQAEVYHQFHNDFQSPAYGKAYNDLVKDAFDDGRVKDTGCPDRF 287          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S4K336_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K336_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.030e-64
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
            G GCFWH+QHE + AE+ +LGRS  ELTS  GY G  K   G K+CYHNL+ + DYGK G  EVV +TIP S + +F+K YF  F    NG      +R DP DRGGEYRSL+G+PGG S P    +++ A+A+G+ L  G G DPDT  +  V+V DTA +PF++GE+YHQFHND  S  YG+ YN L     ++G +  TGCP++
Sbjct:   84 GVGCFWHIQHEFVLAERNLLGRSDKELTSRTGYAGGTKTGDGGKVCYHNLQFVADYGKLGHGEVVGMTIPESSIGDFAKEYFSYFAP--NG------ERVDPGDRGGEYRSLIGLPGGTSHPEYSKVEEAASAKGMRLEPGKGNDPDTFGKKLVYVYDTAKYPFYQGEVYHQFHNDFQSPPYGKAYNKLADMAFDDGRLGVTGCPDR 282          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S0Q9J3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0Q9J3_9CRYP)

HSP 1 Score: 216 bits (549), Expect = 1.720e-64
Identity = 104/204 (50.98%), Postives = 132/204 (64.71%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCP 617
            G GCFWHVQH +  AE  ILGRS  E T+ AGY G+K   +  K+CYHN+ G  DYG+ G +E V + IPS K+ EF+K +F++ V  +         R DPQDRG EYRS++G+PGG+S P     + EAAARG+ L  G GGDPDTL R TV+V D+  FP  +GE++HQFH+DMSE YG  YN LR      G +  TGCP
Sbjct:   36 GAGCFWHVQHALALAEGKILGRSPQEYTAVAGYAGSKAVGRDGKVCYHNIAGDSDYGQLGYSEAVGLQIPSDKISEFAKPFFNLLVDGE---------RADPQDRGPEYRSIIGLPGGMSSPDFPAFQAEAAARGMTLARGAGGDPDTLGRRTVYVYDSDAFPLHQGEVFHQFHDDMSERYGAAYNALRGGAVRRGALVPTGCP 230          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S2M6J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6J5_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.770e-63
Identity = 101/208 (48.56%), Postives = 137/208 (65.87%), Query Frame = 3
Query:    3 WGNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHND-MSEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
            WG GC+WHVQHE I AE++ILGR  +ELTS  GY G  K     ++CYHN + I DYGK G  EVV +TIP SK+ +F+  YF +F   D G      +R DP D+GGEYRSLLG+PGG   P    ++    ARG+ L +G G DPDTL +  V+V D+  FPF++ E YHQ+HND ++  YG++YNNL +   ++G ++ TGCP++
Sbjct:   71 WGAGCYWHVQHEFILAERSILGRKDNELTSLTGYAGGFKTDSEGRVCYHNFQSIADYGKFGHGEVVGMTIPESKVEDFAVEYFKLFG--DKG------ERADPMDKGGEYRSLLGLPGGSKHPAFAQVEAAGKARGMTLVDGKGNDPDTLGKRLVYVYDSNKFPFYQAEFYHQYHNDFLTPAYGKEYNNLAEAALDDGRIKITGCPDR 270          
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Match: A0A7S1YW62_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YW62_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.460e-60
Identity = 95/207 (45.89%), Postives = 134/207 (64.73%), Query Frame = 3
Query:    6 GNGCFWHVQHEMIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDM-SEDYGRKYNNLRKQYAEEGTMQETGCPEK 623
            G GCFWH+QHE ++AE+ ILGR+  ++TS  GY G  K  +  ++CYHN +G+ DYGK G  EVV + IP+  + +F+K YF  F            +R DP DRGGEYR LLG+PGG   PM   +++ A A+   L  G G + DT+ R  V+V DTATFPF++ E+YHQFH+D  S  YG+KYN+L +   ++G ++ TGCP++
Sbjct:   74 GVGCFWHIQHEFVQAERTILGRTDAQITSRTGYAGGTKADKEGRVCYHNFQGVADYGKLGHGEVVGMKIPTENIGDFAKEYFSYFSTKTG-------ERVDPMDRGGEYRYLLGLPGGTKHPMYAQVEEAATAKNFKLEVGKGNEGDTIGRRIVYVYDTATFPFYQAEVYHQFHDDFQSPAYGKKYNSLAQMAFDDGRLKITGCPDR 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9106.20665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK2_ECTSI1.660e-15098.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U3BKH7_9EUKA5.030e-6951.42Peptide-methionine (S)-S-oxide reductase n=1 Tax=L... [more]
A0A7S0AHU9_9STRA1.050e-6850.00Peptide-methionine (S)-S-oxide reductase n=2 Tax=M... [more]
A0A8J5XES5_DIALT4.860e-6650.00Peptide-methionine (S)-S-oxide reductase n=1 Tax=D... [more]
A0A7S1GME3_CYCTE1.170e-6547.60Peptide-methionine (S)-S-oxide reductase n=1 Tax=C... [more]
A0A7S2L8U9_9STRA2.030e-6550.48Peptide-methionine (S)-S-oxide reductase n=2 Tax=L... [more]
A0A7S4K336_9STRA1.030e-6450.24Peptide-methionine (S)-S-oxide reductase n=2 Tax=O... [more]
A0A7S0Q9J3_9CRYP1.720e-6450.98Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S2M6J5_9STRA2.770e-6348.56Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1YW62_9STRA1.460e-6045.89Peptide-methionine (S)-S-oxide reductase n=1 Tax=D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9106contigEcto-sp13_S_contig9106:2719..5180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score406.8
Seed ortholog evalue6e-111
Seed eggNOG ortholog2880.D8LMK2
Model size1270
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Peptide methionine sulfoxide reductase
EggNOG OGs2DF2K@1,2RZE5@2759
Cds size594
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9106.20665.1prot_Ecto-sp13_S_contig9106.20665.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9106 3357..5142 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464182.5815406-UTR-Ecto-sp13_S_contig9106:2718..33561681464182.5815406-UTR-Ecto-sp13_S_contig9106:2718..3356Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9106 2719..3356 -
1681464182.6439223-UTR-Ecto-sp13_S_contig9106:5142..51801681464182.6439223-UTR-Ecto-sp13_S_contig9106:5142..5180Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9106 5143..5180 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464182.5920815-CDS-Ecto-sp13_S_contig9106:3356..35241681464182.5920815-CDS-Ecto-sp13_S_contig9106:3356..3524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9106 3357..3524 -
1681464182.6011486-CDS-Ecto-sp13_S_contig9106:3693..38431681464182.6011486-CDS-Ecto-sp13_S_contig9106:3693..3843Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9106 3694..3843 -
1681464182.6112819-CDS-Ecto-sp13_S_contig9106:4068..41881681464182.6112819-CDS-Ecto-sp13_S_contig9106:4068..4188Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9106 4069..4188 -
1681464182.6217723-CDS-Ecto-sp13_S_contig9106:4633..47571681464182.6217723-CDS-Ecto-sp13_S_contig9106:4633..4757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9106 4634..4757 -
1681464182.6328394-CDS-Ecto-sp13_S_contig9106:5110..51421681464182.6328394-CDS-Ecto-sp13_S_contig9106:5110..5142Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9106 5111..5142 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9106.20665.1

>prot_Ecto-sp13_S_contig9106.20665.1 ID=prot_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
MIKAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNLRGIGDYGKAGA
AEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQDRGGEYRS
LLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTAT
FPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEKFM*
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mRNA from alignment at Ecto-sp13_S_contig9106:2719..5180-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9106.20665.1 ID=mRNA_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9106:2719..5180- (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGGGGGAACGGCTGCTTCTGGCATGTGCAGCATGAGATGATCAAGGCA GAGCAGGCTATCCTCGGCAGGTCCGTGATATGCTAACGTGCTTGCCTCCT GTGTCACTGGCCCCGATCTGACAGTTTTATTTCCACACTTCGTTTGTTCC GCCACCGTTGACTTCTGCTTACCTCCAACTTGTTTGATTGCCTTACCCGT TTTGCGGCCATTTATTCTTAACCAGTGAGAGACTAATGGTTCACACCTTC AATTGCTGCGGCCCTTGGCCGGTGAGTAGCCTGGTGTCCGTTCAAACCCG ACCGAGATACACGAACTATTGGAGTCCTAGCCCAAGTGGATGCTGCAGCC CCTACACATACAATCAAGATCGGGATACCCGTGCACTTTCCGCCTGCTTT CCTTCCTCTACATCGCCCTGCAGGTCCACCGATGAGCTGACTTCCTACGC GGGCTACGGTGGGGCGAAGAAAAACTTCCAAGGGGACAAGCTGTGTTACC ACAACTTGCGAGGAATCGGCGACTACGGCAAGGCCGGGGCCGCGGAGGTG GGTGCGATTTGTTTACACATCAAACGCATTACTCCGAGGTCCATCGGTGT TAACCCCTCTGCGCTGTTTCAACAACTTCAACTTAACCAGGTGTTTGATT CATAGTCGTGCGCGGCGATTATCGGTGCTCCATCATAAGATACCGTCGTG GAAGAGGGTGCTTGAGAACACGTGACAGTCGGAGCCTGTTTCAGCCTCCG AGAGGGTCCGATTCGAAAGAACACTGCAAGCGTTTCATGGCTCACTTTAA GAAACACAAACCATCGTGGTATGAGATGGAAAAGCTCATCGGTTGAGCGC CGATCGTCTTCGTCTTCGTACCGGGTCGCGGAAATCGGTAGATGTATTCT GGTGGTCTCTCGTCGTTTCTCACGCCCTGGGTGTTTCGACAAGATGTGCG ACTTTTGTGATCCCGACACGTGCTGCCGTGGCTATGGGGCAGGTCGTGTC CGTGACAATTCCCTCGTCGAAATTGCCCGAGTTTTCGAAGGCGTACTTCG ACATGTTCGTAAAATACGACAACGGGGCCGGGCGAATCTTCATGGATCGG CGAGACCCTCAGGTCAGACAGGGAGATAGACAGCCAGATAGATGTACGCG AGCTGACGCTGTTATTGCTATTAATGGGTCGCGCAGATATATCGGACCCA CCCGGGTACCTGGCGCTCTTTTCTGCGGTACAAAATGCTTTTGATATCTT TTCGCCGTCGTTTTTTCCCTCCAGCATCCGTAGATCAATCACTCGTCCCT TCATGATTCATTGGAGTGTTGTTTTCCCTGTGTCCAGGATCGAGGAGGGG AGTACAGGTCTCTGCTGGGCGTGCCGGGTGGGCTCTCGGGGCCAATGGCA GATCCCATCAAGCAAGAGGCCGCCGCGCGGGGGCTGGCGCTGAGAGAGGG GAACGGAGGCGACCCTGACACTCTCATGAGGAACACGGTAAGTGGAACGG CAGCACTGCTTGTTGGTTGTCGTCTGATCCGTTGGGCGCGTTCGTTTCTT TTGCTGCCGATGTAGAGAAACGGCCAGGCGGCGATCACGACCGCGACATC ATGATCCCACCTCATCTTCGACACGTGTGTGCGTGTGTGTGTGTTTTGGT TTGAAGGTTTTTGTCATGGACACGGCGACGTTCCCGTTTTTCAAGGGCGA GATTTACCACCAGTTCCACAACGACATGTCGGAGGACTACGGTCGCAAGT ACAACAACCTCCGGAAGCAGTACGCCGAGGAGGGCACCATGCAGGAAACC GGCTGCCCCGAGAAGTTCATGTAGTGCGAAGGAGCAGCGCTTGGCTTTGT TTAGAGAGAACCGCACGAAATGAATCGCCCCATTCGGCGAACCCGCAGTC TCGAATGCGATGGGTTGTTCAATCGGTGTAGTGGTGCGGTACAACGGCTT GATTGCACAGGTAGATAGATACATGCGGTTGTCGTTAGTGTGTGGGGGCT GAAAGCTCGTGGGCTAGAACCTACGAAAGTCTTGGGTCCTGCTCACGCGA GTCTTGGTGTGAGTGCGCTCCTCCTCTCTGCTGCGCGGTTCGCGCGTAAA GCGAAGTCTCGAAATAAGCTCGACCAGCAAGCGAAAATTGAGGACGCCGG CCCGGCGACTCAACATGGTTCAGCTCAGCTCCCCGGCTATATGTTGCCCA AGCGTTGTTGGGGGTAGATGCTGTGTTCTCTTCTGTATGGTGCCTTTCAG TTCCGTAGAATGGGAGTGGTCGCAGTACCCTACGAAGACAAAGGCGAGCA GGAGGAAAGCCCAGGGTTATCATGGGGGAGTGAACCGTGTGGCAAAGTTA ACCGTCGAGAAGTTCGCTACTCGTTGAGTGTTGTTATAGAAAGATAGTTG TTACTGTGCAGGCGGGTATAGCATGTAATGCTGTTTCACTTTTTCCCGTG GAACCGAAAACG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9106:2719..5180-

>mRNA_Ecto-sp13_S_contig9106.20665.1 ID=mRNA_Ecto-sp13_S_contig9106.20665.1|Name=mRNA_Ecto-sp13_S_contig9106.20665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9106:2719..5180- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCAAGGCAGAGCAGGCTATCCTCGGCAGGTCCACCGATGAGCTGAC
TTCCTACGCGGGCTACGGTGGGGCGAAGAAAAACTTCCAAGGGGACAAGC
TGTGTTACCACAACTTGCGAGGAATCGGCGACTACGGCAAGGCCGGGGCC
GCGGAGGTCGTGTCCGTGACAATTCCCTCGTCGAAATTGCCCGAGTTTTC
GAAGGCGTACTTCGACATGTTCGTAAAATACGACAACGGGGCCGGGCGAA
TCTTCATGGATCGGCGAGACCCTCAGGATCGAGGAGGGGAGTACAGGTCT
CTGCTGGGCGTGCCGGGTGGGCTCTCGGGGCCAATGGCAGATCCCATCAA
GCAAGAGGCCGCCGCGCGGGGGCTGGCGCTGAGAGAGGGGAACGGAGGCG
ACCCTGACACTCTCATGAGGAACACGGTTTTTGTCATGGACACGGCGACG
TTCCCGTTTTTCAAGGGCGAGATTTACCACCAGTTCCACAACGACATGTC
GGAGGACTACGGTCGCAAGTACAACAACCTCCGGAAGCAGTACGCCGAGG
AGGGCACCATGCAGGAAACCGGCTGCCCCGAGAAGTTCATGTAG
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