mRNA_Ecto-sp13_S_contig9065.20626.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9065.20626.1
Unique NamemRNA_Ecto-sp13_S_contig9065.20626.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 4.850e-28
Identity = 111/314 (35.35%), Postives = 155/314 (49.36%), Query Frame = 3 
Query:  189 VKLHQAVREGHLHH--VEDVLQQHQPGTATAVSSLNENGDAC--IHVAAKLGHAEIVSLLLHHGAEKDGVGSGSRTPLXXXXXXXXXXXXXXXXXXXADVGVAQCDESGYEHWALSFASRXXXXXXXXXXXXXXXXVLQAG------TRGLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCRTIFNSNR 1100
            V L +AV  GH+    V+ +L       A   S L+E+ D+   +HV+A  G    V+ LL  GA+K+G+ +  RTPL                    D  V       Y  W  S++                  +LQ G      T G T+LH AA+ N+  A+  LV+AGA+VE   D+     TP   +    C++AALAL   GAN+ + +  G +PL   ARQ GR GV+ ++D+LLR GADET ++ DG    +V+G     A      Q  + E +R LL NAPADRAWRRRG+LVLCR  +  +R
Sbjct:   52 VALKEAVDSGHVDESAVKPILVM-----AKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVH------YRIWNRSYS--VLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQ--DLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSR 347
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.090e-26
Identity = 109/312 (34.94%), Postives = 151/312 (48.40%), Query Frame = 3 
Query:  189 VKLHQAVREGHLHH--VEDVLQQHQPGTATAVSSLN----ENGDACIHVAAKLGHAEIVSLLLHHGAEKDGVGSGSRTPLXXXXXXXXXXXXXXXXXXXADVGVAQCDESGYEHWALSFASRXXXXXXXXXXXXXXXXVLQAG------TRGLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCRTIF 1088
            V L +AV  GH+    VE +L          V+SL     ++ D  +HVAA  G    V+ LL  GA+K+G+ +  RTPL                    D  V       Y  W  S++                  +LQ G      T G T+LH AA+ N+  A+  LV+AGA+VE   D+     TP   + +  C++AALAL   G+N+ + +  G +PL   ARQ GR GV+ ++D+LLR GADET ++ DG    +V+G     A      Q  + E +R LL NAP DRAWRRRG LVLCR  +
Sbjct:    3 VALEEAVDSGHVDESAVEPIL------VVAKVASLQYASVDSSDQ-LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVR------YRIWNRSYS--VLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQ--DVERVRDLLENAPVDRAWRRRGFLVLCRAFW 294
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.180e-21
Identity = 80/215 (37.21%), Postives = 112/215 (52.09%), Query Frame = 3 
Query:  606 GLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCRTIFNSNRHRLHCQQHQQQLRLSVDVPTRRRDSLLTGLSVRRRSSKTSDAGNKMWSGL 1250
            G+TAL  A+  ++A A+  L +AGAN+EA+ +    G TPLH +S      A +ALL  GA+V   NA   +PLH  A + G  G + M+DLLLR GADET V  +G+   D++    +   E S     + + +RKLLA APADRAWRRRG L+L R  +   R               V    R   +   G++ R RSS+        W+G+
Sbjct:  557 GITALRVASAFDKAPAIDVLTEAGANIEAQAN----GSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMV----VLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGR---------------VQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGV 748
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.380e-18
Identity = 70/161 (43.48%), Postives = 93/161 (57.76%), Query Frame = 3 
Query:  606 GLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALAL---LHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCR 1079
            G+ ALH+A   N+  A+  L++AGAN  +  ++   G T LH +++ R    A  L   L  GA+V +    G S L   A + G+ G+  ++DLLLRWGADET V  +G R  D IG   ++  E       E E +RKLLANAPADRAWRRR  LVLCR
Sbjct:  193 GVAALHHATANNKVEAMDVLLRAGANARSMSES---GHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIG---MKVPE-EDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCR 346
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.280e-17
Identity = 95/286 (33.22%), Postives = 126/286 (44.06%), Query Frame = 3 
Query:  279 SSLNENGDACIHVAAKLGHAEIVSLLLHHG-AEKDGVGSGSRTPLXXXXXXXXXXXXXXXXXXXADVGVAQCDESGYEHWALSFASRXXXXXXXXXXXXXXXXVLQAGTRGLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQ------EGS-----GHQRGEHESLRK-------LLANAPADRAWRRRGILVLCR 1079
            +S   +G   +H+AA  G+  +VS LL +   + D + S   +PL                   AD+ +     +     A+  A                  V    T GLTALH+A     A AV  L+ AGA+V A+   A  G TPL    +    +A +ALL  G NV   N  G S LH T     R G+ RM+DLLLRWGA ET V+++G  P D++  T           +GS     G     H+SL K       LLA APADR WRRR  LV+ R
Sbjct:  166 NSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHA---RGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSR-GMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLR 447
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.280e-17
Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 3 
Query:  606 GLTALHYAAVRNQAGAVYALVKAGANVEARV--------DNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCR 1079
            G TALH+AA       V+ALV+ GA+VEAR          ++  G T LH ++     D  LALL  GAN  + +  G+ PLH   +      V+ + DLLLRWGA+ET  D DGN P D I +++    E  G        L++LLANAPA RAWRRRG++++ R
Sbjct:  282 GHTALHWAAFDGIQEVVHALVEVGADVEARCLAQLLSEQRHSLKGSTSLHVAAYWETLDTMLALLQKGANANAPDDDGHGPLHLVCKYPKARSVA-VADLLLRWGAEETATDNDGNTPADFIQSSD----ESDGR-------LQRLLANAPAGRAWRRRGMVIMLR 435
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 7.960e-17
Identity = 73/180 (40.56%), Postives = 91/180 (50.56%), Query Frame = 3 
Query:  621 HYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANVASVNAF-GYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCRTIFNSNRHRLHCQQHQQQLRLSVDVP 1157
            H AA+ N A A+ AL KAG  +E R      G TPL  ++     +A LALL  GANV S N   G SPL    R+G         DLLLRWGADET VD D    + ++     RA   S   R   E + +LLA AP DRAWRRRG LV              C  H  +++L+V++P
Sbjct:   97 HIAALHNNAAAMPALFKAGVYIEGRSPK---GRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAA----DLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVAS---RQRLERVSELLARAPQDRAWRRRGFLV-------------PCLSHPDRVQLAVEIP 253
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.840e-15
Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = 3 
Query:  606 GLTALHYAAVRNQAGAVYALVKAGANVEARVDNA------GG----GGTPLHASSVMRCYDAALALLHSG-ANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCR 1079
            G +ALH+A    ++  V AL++ GA+VEAR          GG    G TPLH ++    Y   L LL  G AN  + +  G+SPLH           +   D+LLR GADET  D D + P D++ ++            G +  L++LLANAPADRAWRRRG LV+ R
Sbjct:  194 GYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSE-----------GHNGWLQQLLANAPADRAWRRRGTLVMLR 351
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 5.250e-15
Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 3 
Query:  606 GLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGG---GTPLHASSVMRCYDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVLCRTIFNSNR 1100
            G TALH AA+ NQA AV  L++AGA+ +  V++  G     TPL A++     +A   LL +GA+    +  G  PLH  A +    GV  ++DLLLRWGA ET V++ GN P +V     I   + +  + G       LLA APADRAWRRRG +V+ R    + R
Sbjct:  202 GWTALHQAALDNQAEAVEVLLEAGADAD--VESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQ-TPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAG----ALVLLARAPADRAWRRRGWVVMLRARSETER 362
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BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K)

HSP 1 Score: 90.1 bits (222), Expect = 5.730e-15
Identity = 69/156 (44.23%), Postives = 87/156 (55.77%), Query Frame = 3 
Query:  609 LTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRCYDAALALLHSGANV-ASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGADETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWRRRGILVL 1073
            +T L ++A++N       L++AGAN  A       G + L + S     D AL LL  GA+V AS   FG S LH   +   R     M+DLLLRWGADETVVD  G  P+DV  T+  R Q  +  +    E +RKLL NAPADR WRRRG LV+
Sbjct:  330 MTPLMWSAMKNHLCVSATLLEAGANASAEDQM---GESSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKN--RDNTEAMVDLLLRWGADETVVDDRGRTPLDVF-TSGTRFQRTAETK----ERVRKLLVNAPADRTWRRRGWLVM 475
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9065.20626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE4.850e-2835.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI1.090e-2634.94Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE1.180e-2137.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI2.380e-1843.48Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5K1F4_9PHAE1.280e-1733.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYG4_ECTSI4.280e-1741.57Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KFY7_9PHAE7.960e-1740.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCR2_ECTSI2.840e-1539.05Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FSI6_ECTSI5.250e-1540.48Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
Q8QNP0_ESV1K5.730e-1544.23EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9065contigEcto-sp13_S_contig9065:1353..5382 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score127.5
Seed ortholog evalue1.7e-26
Seed eggNOG ortholog2880.D7G6X8
Model size2801
Hectar predicted targeting categorymitochondrion
Exons4
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size1482
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9065.20626.1prot_Ecto-sp13_S_contig9065.20626.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9065 1355..4052 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464179.4404066-UTR-Ecto-sp13_S_contig9065:1352..13541681464179.4404066-UTR-Ecto-sp13_S_contig9065:1352..1354Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9065 1353..1354 +
1681464179.4809918-UTR-Ecto-sp13_S_contig9065:4052..51161681464179.4809918-UTR-Ecto-sp13_S_contig9065:4052..5116Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9065 4053..5116 +
1681464179.490484-UTR-Ecto-sp13_S_contig9065:5129..53821681464179.490484-UTR-Ecto-sp13_S_contig9065:5129..5382Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9065 5130..5382 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464179.451867-CDS-Ecto-sp13_S_contig9065:1354..18641681464179.451867-CDS-Ecto-sp13_S_contig9065:1354..1864Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9065 1355..1864 +
1681464179.4620607-CDS-Ecto-sp13_S_contig9065:2017..21281681464179.4620607-CDS-Ecto-sp13_S_contig9065:2017..2128Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9065 2018..2128 +
1681464179.4716372-CDS-Ecto-sp13_S_contig9065:3191..40521681464179.4716372-CDS-Ecto-sp13_S_contig9065:3191..4052Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9065 3192..4052 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9065.20626.1

>prot_Ecto-sp13_S_contig9065.20626.1 ID=prot_Ecto-sp13_S_contig9065.20626.1|Name=mRNA_Ecto-sp13_S_contig9065.20626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=494bp
MLLAARVLSRTTAAATAAVAVCFNRPMLSSPSPLAAQQRGLVEAEEQEKI
CERRITKHDVPVVKLHQAVREGHLHHVEDVLQQHQPGTATAVSSLNENGD
ACIHVAAKLGHAEIVSLLLHHGAEKDGVGSGSRTPLHLASVFGHQAVVDV
LLAAGADVGVAQCDESGYEHWALSFASRMGHIHVMNTLLRHGADVLQAGT
RGLTALHYAAVRNQAGAVYALVKAGANVEARVDNAGGGGTPLHASSVMRC
YDAALALLHSGANVASVNAFGYSPLHGTARQGGRVGVSRMMDLLLRWGAD
ETVVDRDGNRPIDVIGTTNIRAQEGSGHQRGEHESLRKLLANAPADRAWR
RRGILVLCRTIFNSNRHRLHCQQHQQQLRLSVDVPTRRRDSLLTGLSVRR
RSSKTSDAGNKMWSGLPTTAPQTPRTPAVGAAPGEGGMFDLCEAAGAEEQ
QLCSLLAREFVEMAEDNDGLRSLLVRLIDIPEEGVFRNAVSFL*
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mRNA from alignment at Ecto-sp13_S_contig9065:1353..5382+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9065.20626.1 ID=mRNA_Ecto-sp13_S_contig9065.20626.1|Name=mRNA_Ecto-sp13_S_contig9065.20626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4030bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9065:1353..5382+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCATGCTCCTGGCTGCGCGAGTCCTGTCCCGCACGACGGCTGCTGCTACT
GCTGCTGTTGCTGTCTGTTTCAACCGGCCTATGCTGTCGTCTCCATCACC
TCTGGCAGCACAACAACGGGGCTTGGTTGAAGCAGAAGAACAAGAAAAGA
TTTGTGAGCGACGGATCACGAAACACGACGTGCCTGTCGTAAAGCTCCAC
CAAGCGGTCCGAGAAGGTCACCTACATCATGTTGAAGACGTTCTCCAGCA
ACATCAGCCAGGGACAGCGACAGCAGTGTCGTCGTTGAACGAGAACGGGG
ATGCTTGTATCCACGTCGCAGCCAAACTCGGCCACGCTGAGATAGTCTCG
CTGCTGCTACACCACGGCGCTGAAAAGGACGGCGTGGGAAGCGGGTCTCG
CACACCTCTCCATCTCGCCAGTGTTTTTGGCCATCAAGCGGTCGTTGATG
TCCTCCTAGCTGCGGGCGCGGATGTCGGCGTCGCACAATGCGATGAGAGT
GGATACGAGCACGTACGTCAGGCTCTTTTTTTCCATGTTTGTATCCTCGA
TGCACTACTGTTTCCTTCTCAGAATTGTTTCGCGATTAATTGTCCCCGTT
GCAACAAAGAGCAGCGCTTGACTTTCCCCTGGCTCCGTCGAATTGTGTGT
GTCATGTGAAGACAGTGGGCGCTCAGCTTTGCTTCGAGGATGGGGCACAT
TCATGTCATGAACACGCTACTGCGCCACGGGGCCGACGTTTTGCAGGCGG
GGACAAGGGGCCTAACCGCGCTCCATGTAAGCCCGTTGTGATGTGCCATT
TTCGACGTTTCTTCCCAGCGACTCTTTGGAAATGCAGTCGCAAAATTGTT
CACAAGGTACTTTCTGAAATGTAAGTATCGTACGTGAACATAACTACTGC
AACTCTTGCCCGCCATTTGCAGCGTATGGCAGGCAGCTGCCTTGTACGTG
CGCACGCCCTCCTGCGTCATCATAACTCACTCCGCCGAAAAATAAAAAGT
TATGTAACATTGCCGGCTACAATAGAAAATTATCTCCTACCGTAGCCAAC
TTTTTCAAGGGTCGTCTAGAGCAACGGTCCTTCCATTCATTATGTCAGAG
CTCCATCAGCGCATTGAAAACCATGTGAAAGCCATGCTGCGGTAACAACA
ACGCAGTGTTTTCACTCAACGACCTGGTCGATCTGTTTTGGTTGTAGCGC
ATGTACAGAGAAGAAAAGATGCCCTACAAGGATACATTTGCGGGTCTGCT
ACGCGCTGTGCCTACCAGTCAGGGCCCCCCCGCATAAAACAATGTTTTCA
ACGGTTTGGACGTGTATCTGCGTTGATAGTCTGTACATATGCATACATCT
GTAAATATTATTAAAACACCCACATCAACAAGAAAAGAAAGCGGTGCAGG
AAACCGCCGTGCGCTACCACTCCTCCCACCCATTGGTTTCCCTAAAACAA
CTATCTCCTGTCCATCTCAGTACAGTCTCTCATTGAAGAACAAGTTTGCT
TTGCTTCTCCCGCCCCCCGATTGCTCATGCAAGCCAGCTTCGCCTTACGA
AGACAATGCGAAACGTCGGGCTGCCGCATTTCTCCGCGAAATCGTCGAGC
TCAAAAAAATAATCGCAGTACGTTTGTCCGGGCTAGGTTGAAGGTACATA
ATTCCTCAGAAATGAGGCATCTCTTTTCTCTTGTCTTTTTTTGCCTTGAC
ATGCCGAATCGTTCTCATATATCCGTATTTTCTCTTCATTTATCGATCAT
TATTACATCGTAGCCGGCACTGCTGTAGCGATAGAAGGTTTCGCGATCAT
TTACCGCTCCCCTACATATCGTGTGATTGTGCACAACAGTACGCCGCCGT
GCGCAACCAGGCTGGTGCAGTCTACGCGTTAGTCAAAGCAGGGGCCAACG
TCGAAGCAAGGGTGGACAACGCCGGCGGTGGTGGTACGCCTCTCCACGCG
TCCTCCGTGATGCGGTGCTATGACGCGGCGCTGGCCCTCCTGCATAGCGG
TGCGAACGTCGCGTCCGTTAACGCGTTCGGCTACTCGCCCTTACACGGGA
CGGCACGCCAGGGCGGTAGGGTCGGAGTTTCGAGAATGATGGACCTGTTG
CTAAGGTGGGGAGCGGATGAAACCGTCGTGGATCGGGATGGAAACAGGCC
GATCGACGTGATCGGCACTACTAATATCAGAGCCCAAGAGGGGAGTGGTC
ACCAGCGAGGCGAACACGAGAGCTTGCGGAAACTGCTGGCGAACGCTCCT
GCCGACAGGGCTTGGCGCCGCCGGGGAATCCTGGTGTTGTGCCGTACCAT
TTTTAATAGTAATCGCCACAGGCTTCACTGCCAGCAGCATCAGCAGCAGC
TACGACTGAGCGTGGACGTCCCTACTCGTCGACGTGATTCACTCCTCACT
GGCCTATCGGTACGCCGCCGGAGTAGTAAGACGTCCGATGCGGGGAACAA
GATGTGGTCTGGGCTCCCCACAACTGCGCCGCAGACCCCTAGGACACCCG
CAGTGGGAGCAGCACCAGGAGAGGGAGGAATGTTCGATTTGTGCGAAGCA
GCCGGGGCCGAGGAGCAGCAGCTTTGCTCGTTGCTTGCACGAGAGTTTGT
TGAGATGGCTGAGGATAACGATGGCTTGAGGTCGCTCCTGGTTCGGCTCA
TAGATATTCCAGAGGAGGGGGTGTTTCGGAACGCCGTGTCCTTCTTGTAA
TGCCATGTAAGACGGAGGGTTGAGGTTGCCGCCGGCCGCAGAAGAATCAG
AATCGGTTTTTCAGGTCAACACAAGGACACAAGGTGTGTCCTTGAAGTTT
TGAAGTTCTCCTTCTTCTGTGTGTATGGCAGGGAAACTGCCGCTGGTGGG
CTTTAAGTTGGGTGTCAATGTGGGGTGCGTACCAGGAGAGCGTGCGTTTT
GTGTTTACAAGTGTGCACATCTTTTCCTTCTTCAAGCGTGCCCTTTGGCA
GCTATTTTTCCGTTGCAATGTCACCTCACGTGCAAAAGGGGCGTGTGTGA
ATAGTACGTGGGGAACAACGAGCTTGTTGATTACTTGCTGATGAGTATGC
GCTTTCCGGGGTCGTAGATGGGATTTTTGTGTTGTTCCATTTGTGGCTTG
TTCTTCTGTTTATGTTGTGGAGCACGGGCGAGTAGGCGCATATCGGCTCC
CTGTCTCGGCGTGGATACCGGAATATTACTGTCAAGCGAATATCAAGCTT
CTAGTGCGTACACAATACTGTGTACGAGTCATCCTTGCCTCATGAAAAGC
TGGTGTTCGAGTTGTTCAGAAGAGTTTTTTTGGTGTTGCTTCACTCAACC
GTTTTGCGCAGTTGACTTTGCCCCTCACAGCAAAGCTTCATGTGCTTACA
TCCGGTTAATCATCTGTTTGACCAGCCAGGTCCTGTGTGCTCGAGACGTG
GTGCGGGCGTTGGTGCCAAATCGTTCTTGTTGTAACCAGGAAATGTAGCG
AAATCCCCTGTATATTGCATAAGTCATGTCGTTCCTGTAAATAGGCCAGT
TCATTCCAAGTTTGTGCATAGTCTAAGGCATCTATTCGTTCCTACGGCCT
GCGTGCCAGAGGAATATTTCCAAGCCGAAGTAGGCAATTTCTCGCGCGTA
CAAATTGTGCACGAGTGAACGGGAAGAGAACAATAAATTCCCTGTAAATA
AGGCATTTCGTAGCTCCGCAGCACCGAAGTAGTGTGACAAGGCACCTACC
TGGTTCGCAATTAGAACCCGTGCATTGATGAGATACTTGTTGAACGGCAC
ATGTTGATATGATTGGTAGGGGATCGGGGTAGGGGATCGGGGCCTTGACT
CTGTGCCATACGTAGGGTTGTGTAATGTTTGATTCTCCGCTTATAGCGGA
ACTTGTTTGTCCTCTCAACAGAAGGAGAACGCGACAAGCCGAGGTTTGCC
AGTGAAATCCCGACTGAGTATGGTATAGAGAATGAGAGAGTGACGACGAT
ATCAACGACGCATAGGGGAAAGATACGCCATCCATTCAGGTGAAAAGAGA
TACGTAATTCTAGCGCAGAGTATTCATTCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9065:1353..5382+

>mRNA_Ecto-sp13_S_contig9065.20626.1 ID=mRNA_Ecto-sp13_S_contig9065.20626.1|Name=mRNA_Ecto-sp13_S_contig9065.20626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1482bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9065:1353..5382+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCCTGGCTGCGCGAGTCCTGTCCCGCACGACGGCTGCTGCTACTGC
TGCTGTTGCTGTCTGTTTCAACCGGCCTATGCTGTCGTCTCCATCACCTC
TGGCAGCACAACAACGGGGCTTGGTTGAAGCAGAAGAACAAGAAAAGATT
TGTGAGCGACGGATCACGAAACACGACGTGCCTGTCGTAAAGCTCCACCA
AGCGGTCCGAGAAGGTCACCTACATCATGTTGAAGACGTTCTCCAGCAAC
ATCAGCCAGGGACAGCGACAGCAGTGTCGTCGTTGAACGAGAACGGGGAT
GCTTGTATCCACGTCGCAGCCAAACTCGGCCACGCTGAGATAGTCTCGCT
GCTGCTACACCACGGCGCTGAAAAGGACGGCGTGGGAAGCGGGTCTCGCA
CACCTCTCCATCTCGCCAGTGTTTTTGGCCATCAAGCGGTCGTTGATGTC
CTCCTAGCTGCGGGCGCGGATGTCGGCGTCGCACAATGCGATGAGAGTGG
ATACGAGCACTGGGCGCTCAGCTTTGCTTCGAGGATGGGGCACATTCATG
TCATGAACACGCTACTGCGCCACGGGGCCGACGTTTTGCAGGCGGGGACA
AGGGGCCTAACCGCGCTCCATTACGCCGCCGTGCGCAACCAGGCTGGTGC
AGTCTACGCGTTAGTCAAAGCAGGGGCCAACGTCGAAGCAAGGGTGGACA
ACGCCGGCGGTGGTGGTACGCCTCTCCACGCGTCCTCCGTGATGCGGTGC
TATGACGCGGCGCTGGCCCTCCTGCATAGCGGTGCGAACGTCGCGTCCGT
TAACGCGTTCGGCTACTCGCCCTTACACGGGACGGCACGCCAGGGCGGTA
GGGTCGGAGTTTCGAGAATGATGGACCTGTTGCTAAGGTGGGGAGCGGAT
GAAACCGTCGTGGATCGGGATGGAAACAGGCCGATCGACGTGATCGGCAC
TACTAATATCAGAGCCCAAGAGGGGAGTGGTCACCAGCGAGGCGAACACG
AGAGCTTGCGGAAACTGCTGGCGAACGCTCCTGCCGACAGGGCTTGGCGC
CGCCGGGGAATCCTGGTGTTGTGCCGTACCATTTTTAATAGTAATCGCCA
CAGGCTTCACTGCCAGCAGCATCAGCAGCAGCTACGACTGAGCGTGGACG
TCCCTACTCGTCGACGTGATTCACTCCTCACTGGCCTATCGGTACGCCGC
CGGAGTAGTAAGACGTCCGATGCGGGGAACAAGATGTGGTCTGGGCTCCC
CACAACTGCGCCGCAGACCCCTAGGACACCCGCAGTGGGAGCAGCACCAG
GAGAGGGAGGAATGTTCGATTTGTGCGAAGCAGCCGGGGCCGAGGAGCAG
CAGCTTTGCTCGTTGCTTGCACGAGAGTTTGTTGAGATGGCTGAGGATAA
CGATGGCTTGAGGTCGCTCCTGGTTCGGCTCATAGATATTCCAGAGGAGG
GGGTGTTTCGGAACGCCGTGTCCTTCTTGTAA
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