mRNA_Ecto-sp13_S_contig9061.20623.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: D7FK14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK14_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 5.770e-135 Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 1
Query: 19 ELPRKVGGFFAVIARKGGERELEASPVEESTNKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKDDPTRTEMTT 627
ELPRKVGGFFAVIARKGGERELEASP EST KYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGY+YPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAK DPTRTEMTT
Sbjct: 6 ELPRKVGGFFAVIARKGGERELEASPEAESTTKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 208
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A835Z8H4_9STRA (START domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H4_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.820e-55 Identity = 94/171 (54.97%), Postives = 120/171 (70.18%), Query Frame = 1
Query: 115 KYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKDDPTRTEMTT 627
+Y EL+ A+ AE + PGW EV + GVTVWKK+ PK YG QYPCVKA ++E +A + +I+DS+RVLEYNRYS+GR D+ LGPHTKIVWN+ QPPL+ K+HDFCTLMH+ D G + TRAT+H +AP L G VRSEI+LGVT++ P P R +TT
Sbjct: 1 RYFDELEAARRMAEAIMPDPGWVEVHQKDGVTVWKKWLPKGVYGSQYPCVKATAVVEVNAEAFVDLILDSSRVLEYNRYSRGRDDVARLGPHTKIVWNRTQPPLTGKVHDFCTLMHVDRRDG--GGATVTTRATDHERAPRLRGAVRSEIVLGVTVVEPLA--PGRATVTT 167
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A4D9DEU8_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEU8_9STRA) HSP 1 Score: 191 bits (485), Expect = 2.310e-50 Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 1
Query: 115 KYLAELQLAQESAERALGTPG--WEEVAHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNVELA 723
+YL+ L+ +E +ALG G W V+ + +W++ +D YG +YPC+K ++ S VM ++VDS RV EYN+YSKGR D+ +GPHTKIVWN+ PPL KK H+FCT+MH+ D GS +++T+ T+HP+ P RSEI+LGVT +RP DP R +TT++H+ S G+P IA++ S + +DF +++ A
Sbjct: 203 RYLSLLRSLEEEGHQALGDEGGGWHPVSEKEDTKIWRRNLAEDAYGREYPCLKLSTMLHASPEAVMDLLVDSERVGEYNKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPD--GSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSAGIPPFIAEKFSVRGVVDFAESLRKA 405
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7S2DLP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLP4_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.910e-40 Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 229 PKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 714
PKD YG + VK+R ++ S ++ MI DS+R EYN+YS GRTD LG TKIVWN+ PP +K+ HDFCTLMH + + G+ +L+T ATEHPK ++RSEILLGV ++ P + +TE+T +NH+ + GVP +A+RVS +AIDF++ V
Sbjct: 3 PKDTYGSENSFVKSRSLVSASPGDIFDMIYDSSRTKEYNKYSVGRTDAVELGKTTKIVWNRTAPPGTKRPHDFCTLMHGETFTN--GTQLLMTCATEHPKVKPSKEYLRSEILLGVNLMVPISEG--QTELTCINHVKTKGVPTFLAERVSAGSAIDFVRQV 160
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7S2Y106_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y106_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.310e-37 Identity = 72/179 (40.22%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 106 STNKYLAELQLAQESAERALG---------TPGWEEVAHR-GGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKDDPTR 612
S+N +E Q+ +E L + W+ V + G VWK Y PKD G YP +K+ GI+ AA+++ M++DS RV EYNR+SKGRTD++ +G TK+VWN+ PP++ K HDFCTLMH+ + ++GS+ ++T+A +HPK P G +RS I+ G +P DP++
Sbjct: 191 SSNTAASETQILKEQTNELLQGYSEYLLNPSYNWKLVIEKEDGTKVWKAYAPKDADGADYPIIKSHGIVNAPAADLVEMMIDSERVQEYNRFSKGRTDVQTMGEDTKVVWNRTWPPMTPKPHDFCTLMHVTK-NPKDGSYAMLTKAIQHPKVPKTKGFIRSRIVCGAMFFKPVPGDPSK 368
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7S2EST7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EST7_TRICV) HSP 1 Score: 120 bits (302), Expect = 2.890e-26 Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 1
Query: 199 GGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDI------------EHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDD------------EEGSFMLITRATEHPKAP-------LLDGH----VRSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 714
G + VW F D YG + P VK +++ S +++DS+RV YN+ S GR D+ E+ KIV N QPPLSK+ +F TLMH + LDD +E F++++RA K P + DGH +RSEILLGV ++RP P + E+T V H S VP M+A +V K A+ F+++V
Sbjct: 131 GDILVWTGKFRSDGYGSELPLVKTTWLLDMSPRSFAELLMDSSRVRSYNKMSLGRADLICFQLGIDTIKGEYGNGEAKIVRNLTQPPLSKRRMEFITLMHARRLDDADAVNSGMMGGDKENGFVVVSRAIGGNKIPNKEVGNKMDDGHDESYIRSEILLGVNLIRPIPGHPQKAEVTAVTHCNSPSVPTMLAGKVGVKGAVGFVKDV 337
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7R9VKG4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKG4_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.910e-25 Identity = 73/188 (38.83%), Postives = 108/188 (57.45%), Query Frame = 1
Query: 190 AHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDI-------EHLGPH----TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRA-TEHPKAPLLDGHV-RSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 714
A V VW F YG P V+A G+I + +++ M++DS+RV EYN+ S GR D+ E+ GP TK+V + ++PPL +K +F TLMH + L+D G +++++RA T+ +A DG V RSEIL+GV + R + D R M TVNHI S VP+MIA ++ A F ++
Sbjct: 85 ADENEVLVWSGNFTHGLYGSDLPTVRAEGVINMAPIKIVEMLMDSSRVHEYNKMSLGRDDVLVLQDDLENDGPFGQSITKVVRSASKPPLVRKPIEFVTLMHARKLEDGNG-YLIVSRAVTQAEEAINSDGKVMRSEILMGVNVFRNVEGDENRCVMITVNHIRSPMVPMMIAKKIGLSAATGFFNDL 271
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7S1VKR8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKR8_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.520e-24 Identity = 64/178 (35.96%), Postives = 102/178 (57.30%), Query Frame = 1
Query: 205 VTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDI----EHLGPH------TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHV-RSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFI 705
V VW F YG P ++A G++ S ++ M++DSTRV EYN S GR D+ E + P TKIV ++ QPP+ +K F T++H + L ++ G ++LI+RA H +LD ++ RSEIL+G+ ++R + +P ++ M VNHI S +P +A ++ A +FI
Sbjct: 86 VLVWSGNFMHGYYGSDLPAIRAAGLVNMSPGALVDMLMDSTRVKEYNTMSLGRKDMLVLQEDMDPDGPFRGITKIVQSETQPPMIRKTVQFTTILHARKLPND-GGYLLISRAVHHGAPSILDSNIIRSEILMGLNVIRSIEGEPNQSFMINVNHIRSPLIPFFVAKKLGLSAASNFI 262
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A6U6KS53_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KS53_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.170e-23 Identity = 69/188 (36.70%), Postives = 110/188 (58.51%), Query Frame = 1
Query: 190 AHRGGVTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDI-------EHLGPH----TKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRA-TEHPKAPLLDGHV-RSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 714
A V VW F YG P V+A G++ + + ++ +++D++RV EYN+ S GR D+ E+ GP TK+V + ++PPL +K +F TLMH++ L+D G +++++RA T+ +A DG V RSEIL+GV I+R + D R M VNHI S +P+MIA ++ A+ F ++
Sbjct: 279 ADENDVLVWSGNFTHGLYGSDLPTVRAEGVVNMAPSALVDLLLDNSRVYEYNKMSLGRDDVLVLQDDLENDGPFGQSITKVVRSASKPPLVRKSLEFVTLMHVRKLEDGNG-YLIVSRAVTQAEEAINSDGKVMRSEILMGVNIIRNVEGDDNRAIMINVNHIRSPMIPMMIAKKIGLSAAVGFFTDL 465
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Match: A0A7S2K4D5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4D5_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.900e-22 Identity = 65/196 (33.16%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 205 VTVWKKYFPKDEYGYQYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDI-----------EHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGS---FMLITRAT---------EHPKAP---LLDGHVRSEILLGVTILRPAKDDPTRTEMTTVNHIVSNGVPVMIADRVSTKNAIDFIQNV 714
+ VW F YG+ P VK R I+ S +++DS +V YN+ S GRTD+ E K+V N +PPL+K+ +F TLMH + L+ + G +++++RA E+P +RSEILLGV +LR + +P +T++T+V H+ S VP + A +V K A+DFI+++
Sbjct: 57 ILVWFAKFDDHCYGHALPLVKTRAIVNMSPKAFAELLMDSKKVKLYNKMSLGRTDVKVFQAGVDAVGEFGDGEAKVVQNLTKPPLTKRTLEFVTLMHARKLNPDHGEGEGYLVVSRAVNDRLERDAAENPTTASDVTTMERLRSEILLGVNVLRAIEGEPNKTDLTSVTHVNSPLVPALAAKKVGLKGAVDFIRDI 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9061.20623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9061.20623.1 >prot_Ecto-sp13_S_contig9061.20623.1 ID=prot_Ecto-sp13_S_contig9061.20623.1|Name=mRNA_Ecto-sp13_S_contig9061.20623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp MSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTback to top mRNA from alignment at Ecto-sp13_S_contig9061:1327..6093- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9061.20623.1 ID=mRNA_Ecto-sp13_S_contig9061.20623.1|Name=mRNA_Ecto-sp13_S_contig9061.20623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4767bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9061:1327..6093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9061:1327..6093- >mRNA_Ecto-sp13_S_contig9061.20623.1 ID=mRNA_Ecto-sp13_S_contig9061.20623.1|Name=mRNA_Ecto-sp13_S_contig9061.20623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9061:1327..6093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |