mRNA_Ecto-sp13_S_contig9014.20569.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI) HSP 1 Score: 350 bits (898), Expect = 3.080e-118 Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 2
Query: 284 SRRGMSSSRGGKGSDTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILSK 826
SRRGMSS+RGGKGS+TAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLR+VELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILSK
Sbjct: 32 SRRGMSSARGGKGSNTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILSK 212
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.550e-28 Identity = 57/137 (41.61%), Postives = 92/137 (67.15%), Query Frame = 2
Query: 401 LGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 811
+G+G D+M + K+ + G++ GF +G ++++ S++ +PNSF LW+P+ +ITVESL + L+ PKI+++I+G GER L P L+++ KGI VE M T +A +T+NVL +EDR VAAALL + P ++
Sbjct: 43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTDK 178
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC) HSP 1 Score: 116 bits (291), Expect = 6.530e-28 Identity = 57/132 (43.18%), Postives = 91/132 (68.94%), Query Frame = 2
Query: 410 GFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 805
G D+ ++ KV I YD GF + D V++RGS+ +PN ++W+P+ +IT+ESL + + P I+++++G G+R+ +L+P LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L P+
Sbjct: 25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 155
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA) HSP 1 Score: 116 bits (290), Expect = 8.620e-28 Identity = 59/132 (44.70%), Postives = 90/132 (68.18%), Query Frame = 2
Query: 410 GFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 805
G D+ ++ KV I YD GF + D V++RGS+ +P+ ++W+P +ITVESL I + P I+++++G G+R+ +LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L P+
Sbjct: 23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 153
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC) HSP 1 Score: 116 bits (290), Expect = 4.160e-27 Identity = 63/141 (44.68%), Postives = 93/141 (65.96%), Query Frame = 2
Query: 401 LGKGFDLM---EDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTAR-LDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 811
LGKG D++ ++ R++ + GYD GF++ D V+ RGS++ +P + LW+PK+ +IT ESL + +V P I+++I+G GE + R L +K LA+ G+ VE MDT +ACSTFN+LN EDRRVAAALL + E
Sbjct: 68 LGKGIDVLAVGNEEEAGRERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAE 207
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.500e-26 Identity = 60/146 (41.10%), Postives = 93/146 (63.70%), Query Frame = 2
Query: 365 RRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSP 802
RRQ AG + G D+ ++ KV I YD GF + + V++RG++ P +LW+P+ +IT ESL + + P ++++++G G+R+ LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L + P
Sbjct: 7 RRQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAILPVVP 151
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A7S3YDW4_HETAK (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDW4_HETAK) HSP 1 Score: 113 bits (283), Expect = 5.710e-26 Identity = 56/135 (41.48%), Postives = 89/135 (65.93%), Query Frame = 2
Query: 401 LGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 805
LGKGFD++ D + + K VI GYD GF + GV V G ++ P+ ++LW+P + S +++E+L+ V ++ PKI+++++G G + D + +GI +E M+T+NAC+TFN+L AE R VAAALL + PE
Sbjct: 60 LGKGFDILADYDEMQSKTVIEGYDSWGFTI-KGVRVEGGVLAFPSHYLLWRPTKFSHLSLEALQPVAIIKPKIEILVLGCGPTIPTLPDREIYTFFKKRGISLEVMNTINACATFNILCAEGRPVAAALLPIDPE 193
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: K3X683_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X683_GLOUD) HSP 1 Score: 111 bits (277), Expect = 8.240e-26 Identity = 56/137 (40.88%), Postives = 87/137 (63.50%), Query Frame = 2
Query: 410 GFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESIL 820
G D+ ++ + K+ + YD GF + D V++RG + P +LW+PKR +IT ES+ + + P I+++++G G R+ LDP + + L GI VE +D+VNAC+TFN+LNAEDR+VAAA+L PE I+
Sbjct: 26 GHDMHKEMLNGTAKISVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESMTVFTVANPPIEILVLGCGARIQFNLDPEIKQFLKENGIVVEYLDSVNACATFNILNAEDRKVAAAILPYDPEASKIV 161
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.170e-25 Identity = 57/136 (41.91%), Postives = 87/136 (63.97%), Query Frame = 2
Query: 398 ALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 805
A+ G DL ++ + K+ + YD GF + D V++RG + P +LW+PKR +IT ESL + + P I+++++G G R+ LDP + + L GI VE +D+VNAC+TFN+LNAEDR+VAAA+L P+
Sbjct: 21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAILPCDPD 155
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Match: A0A3R7H579_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H579_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.280e-25 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 2
Query: 449 KVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRIVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSP 802
KV I YD GF + + V++RG + +LW+PKR DIT E L + + P I+++I+G GER++ LDP L + L GI VE +DTVNAC+TFN+LNAEDRRVAAALL P
Sbjct: 11 KVSITEYDEGGFVINN-VNMRGGVALFSEIAMLWKPKRMEDITSEHLAVFTVANPPIEILILGCGERISHMLDPKLKEMLKVNGIVVEYLDTVNACATFNILNAEDRRVAAALLPYDP 127 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9014.20569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9014.20569.1 >prot_Ecto-sp13_S_contig9014.20569.1 ID=prot_Ecto-sp13_S_contig9014.20569.1|Name=mRNA_Ecto-sp13_S_contig9014.20569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp MIAAAAKPRASGVRSLVRGRDGNAAGIRALSAASLASSYVSGLQAPPLTSback to top mRNA from alignment at Ecto-sp13_S_contig9014:2..3217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9014.20569.1 ID=mRNA_Ecto-sp13_S_contig9014.20569.1|Name=mRNA_Ecto-sp13_S_contig9014.20569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9014:2..3217- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9014:2..3217- >mRNA_Ecto-sp13_S_contig9014.20569.1 ID=mRNA_Ecto-sp13_S_contig9014.20569.1|Name=mRNA_Ecto-sp13_S_contig9014.20569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9014:2..3217- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |