mRNA_Ecto-sp13_S_contig898.20519.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig898.20519.1
Unique NamemRNA_Ecto-sp13_S_contig898.20519.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: D8LFP9_ECTSI (Phosphoglycerate kinase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LFP9_ECTSI)

HSP 1 Score: 848 bits (2192), Expect = 4.850e-299
Identity = 438/444 (98.65%), Postives = 443/444 (99.77%), Query Frame = 1
Query:    1 MKIVCAALCVQAVGAFVAPSVVKSGLARSSSRAAAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            MKIVCAALCVQAVGAFVAPSVVKSGLAR+SSR+AAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLT+LLGKDCKMAPDCVGDEVAKIAD LGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEIT++GCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA
Sbjct:    1 MKIVCAALCVQAVGAFVAPSVVKSGLARASSRSAAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTKLLGKDCKMAPDCVGDEVAKIADGLGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITSEGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 444          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A835YTR9_9STRA (Phosphoglycerate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR9_9STRA)

HSP 1 Score: 645 bits (1664), Expect = 2.690e-219
Identity = 342/441 (77.55%), Postives = 376/441 (85.26%), Query Frame = 1
Query:   52 APSVVKSGLARSSSRAAAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELA--------------KELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            AP+VV     RS++RAA+  +M    +VKK SVGDL D +LKGKKVLVRCDLNVPL  K I DDTR+RASIPT+++LL KGARVALSSHLGRPK+GPEDKFSL  VA RLTELLG++CKMAPDC G EV  + D+L DGEVMLLENVRFY  E KN  +FAE+LAAPFD+FVNDAFGTAHRAH STEGVTKFLSPSVAGFLLQKELDYL GAV EPKRPFAAIVGGSKVSSKIGVIES+LAK DKLIIGGGMVFTFLKARGL  GSSLVEED+LELA              K+LE+ AK  GV++ILPSDVV+AD FAADA TQVV +DAIPDGWMGLDNGPEATKEIQAAL +CKTV+WNGPMGVFE EAFAKGTFA+A+TLAEIT  GC TI+GGGDSVAAVEKA LA+KMSHISTGGGASLELLEGKVLPGVAALN+A
Sbjct:   21 APAVVS----RSAARAASTARM---TMVKK-SVGDLSDAELKGKKVLVRCDLNVPLDGKTITDDTRVRASIPTVKYLLEKGARVALSSHLGRPKNGPEDKFSLSAVAPRLTELLGQECKMAPDCKGAEVKAMVDSLKDGEVMLLENVRFYKEEEKNVPEFAEELAAPFDMFVNDAFGTAHRAHGSTEGVTKFLSPSVAGFLLQKELDYLEGAVSEPKRPFAAIVGGSKVSSKIGVIESMLAKVDKLIIGGGMVFTFLKARGLNTGSSLVEEDQLELATKAIFAARDATCASKQLEKIAKEKGVQLILPSDVVIADKFAADANTQVVSSDAIPDGWMGLDNGPEATKEIQAALADCKTVIWNGPMGVFEMEAFAKGTFAVANTLAEITPKGCITIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALNEA 453          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A836CNP0_9STRA (Phosphoglycerate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNP0_9STRA)

HSP 1 Score: 644 bits (1660), Expect = 3.450e-219
Identity = 328/416 (78.85%), Postives = 368/416 (88.46%), Query Frame = 1
Query:   85 SSSRAAAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            S +R AA     A   VKK SVGDL D +L+GK+VLVRCDLNVPLS K I DDTR+RAS+PT+ HLL++GARVALSSHLGRPKDGPEDKFSL  VA RL++LLG +CKMAPDC GD VA + DAL DGEVMLLENVRF+  ETKN   FA++LAAPFD+FVNDAFGTAHRAH STEGVTK+LSP VAGFLLQKEL+YL GA+ +PKRPFAAIVGGSKVSSKIGVIES+LAK DKLIIGGGMVFTFLKARGL VG+SLVEED+LELA +LE+ AK  GVE+ILPSD+V+AD FAADA T+VVKADAIPDGW+GLDNGPEATKEIQAAL +CKTV+WNGPMGVFE EAFA+GTFA+A+TLA+IT  GCTTI+GGGDSVAAVE+A LADKMSHISTGGGASLELLEGKVLPGVAAL+DA
Sbjct:    8 SLARRAATTTARAMTTVKK-SVGDLTDAELRGKRVLVRCDLNVPLSGKAIADDTRVRASVPTVRHLLARGARVALSSHLGRPKDGPEDKFSLDAVAPRLSQLLGVECKMAPDCKGDAVAAMVDALQDGEVMLLENVRFHKEETKNVPAFAKELAAPFDMFVNDAFGTAHRAHGSTEGVTKYLSPCVAGFLLQKELNYLQGAISDPKRPFAAIVGGSKVSSKIGVIESMLAKVDKLIIGGGMVFTFLKARGLNVGASLVEEDQLELATKLEKIAKEKGVELILPSDIVIADKFAADANTRVVKADAIPDGWLGLDNGPEATKEIQAALADCKTVIWNGPMGVFEMEAFARGTFAVAETLAQITPKGCTTIIGGGDSVAAVERAGLADKMSHISTGGGASLELLEGKVLPGVAALDDA 422          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A7R9UCB1_9STRA (Phosphoglycerate kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCB1_9STRA)

HSP 1 Score: 642 bits (1656), Expect = 6.150e-218
Identity = 335/444 (75.45%), Postives = 368/444 (82.88%), Query Frame = 1
Query:    1 MKIVCAALCVQAVGAFVAPSVVKSGLARSSSRAAAPMQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            + ++ A L    V AF    + ++  A S S  AAP          K SVGDL +EDLKGK VLVRCDLNVPL  K I DDTRIRAS+PTI+ L+ KGA+VALSSHLGRPKDGPEDKFSLGPVA RLTELL K+ KMAPDCVGDEV  + + + DG+ +LLENVRFYP ET N+  FAEKLAAPFDLFVNDAFGTAHRAH STEGVTK+L  SVAGFLLQKELDYL GAV EPKRPFAAIVGGSKVSSKIGVIES+L K DKLIIGGGMVFTFLKARG  VGSSLVE+DKL+LAKELEEKA   GVE+ILPSDV+ ADAFAADA TQV  A  IPDGWMGLDNGPEATK I  ALKECKT++WNGPMGVFE++AFAKGTF IA+TLAE TADGC TI+GGGDSVAAVEKA LA+KMSHISTGGGASLELLEGK+LPGVAALN+A
Sbjct:   28 LSVLSALLLAANVAAFAPVRLARTASALSMSATAAPPA--------KKSVGDLTEEDLKGKAVLVRCDLNVPLDGKTITDDTRIRASVPTIKALMEKGAKVALSSHLGRPKDGPEDKFSLGPVAGRLTELLEKEVKMAPDCVGDEVKAMVEGMADGDCILLENVRFYPEETANEPAFAEKLAAPFDLFVNDAFGTAHRAHASTEGVTKYLDTSVAGFLLQKELDYLQGAVAEPKRPFAAIVGGSKVSSKIGVIESMLEKVDKLIIGGGMVFTFLKARGEKVGSSLVEDDKLDLAKELEEKAAAKGVELILPSDVIAADAFAADANTQVCAAGEIPDGWMGLDNGPEATKMISEALKECKTIIWNGPMGVFEFDAFAKGTFDIAETLAECTADGCITIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKILPGVAALNEA 463          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A7S3AND0_9EUKA (Phosphoglycerate kinase n=4 Tax=Eukaryota TaxID=2759 RepID=A0A7S3AND0_9EUKA)

HSP 1 Score: 625 bits (1612), Expect = 1.420e-211
Identity = 318/405 (78.52%), Postives = 350/405 (86.42%), Query Frame = 1
Query:  118 MADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            +A   + K SVGDL + DLKGKKVLVRCDLNVPL  K I DDTRIRAS+PT+E+L+SKGA+V LSSHLGRPK GPEDKFSLGP A RL+ELLGK+ KMAPDC+GD V +  DA+ DG+V+LLEN RFY  E KN  +FAEKLAA  DLFVNDAFGTAHRAH STEGVTKFLSPSVAGFLLQKELDYL GAV EPKRPFAAIVGGSKVSSKIGVIESL+ K DK++IGGGMVFTFLKARGL  GSSLVEED+LELA +LE+ A   G+  ILPSDVVVAD FAADA TQ VKADAIP+GWMGLDNGPEAT EI   L +CKTV+WNGPMGVFE+EAF+KGTFAIADTLAE+T  GCTTI+GGGDSVAAVEKA LA+KMSHISTGGGASLELLEGKVLPGVAAL +A
Sbjct:   44 VAPVEMAKKSVGDLTEADLKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTVEYLVSKGAKVLLSSHLGRPKSGPEDKFSLGPCAPRLSELLGKEVKMAPDCIGDGVKECVDAMADGDVLLLENTRFYKEEEKNVPEFAEKLAANADLFVNDAFGTAHRAHGSTEGVTKFLSPSVAGFLLQKELDYLDGAVSEPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELASKLEKIAAEKGITFILPSDVVVADKFAADAATQTVKADAIPEGWMGLDNGPEATAEIIKELSDCKTVIWNGPMGVFEFEAFSKGTFAIADTLAELTGTGCTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALQEA 448          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A835Z2Y0_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y0_9STRA)

HSP 1 Score: 619 bits (1597), Expect = 8.760e-210
Identity = 314/400 (78.50%), Postives = 355/400 (88.75%), Query Frame = 1
Query:  130 VVKKLSVGDLKDEDLKGKKVLVRCDLNVPL-SDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALN 1326
            V  + SVGDL   ++KG KVLVRCDLNVP+ +   I DDTR+RASIPTI+HLL++GA+VAL SHLGRPK GP+ K+SL PVA RL+ELLGK+ KMAPDCVG +VA + +ALG+G+V+LLENVRF+ AE KND DFA+ L+APFD+FVNDAFGTAHRAH STEGVTK+LSPSVAGFL+QKELDYL GA+ EPKRPFAAIVGGSKVSSKIGVIE++L K DKL+IGGGMVFTFLKARGL VGSSLVE+D+L+LA +LE  AK  GVEIILP DVVVAD FAADA TQVV ADAIPDGWMGLDNGPEATKEIQAAL +CKTV+WNGPMGVFE EAFAKGTFA+ADTLAE+T+ GCTTI+GGGDSVAAVEKA LADKMSHISTGGGASLELLEGKVLPGVA L+
Sbjct:   18 VAARRSVGDLTFAEMKGAKVLVRCDLNVPIDASGAITDDTRVRASIPTIKHLLTRGAKVALCSHLGRPKGGPDAKYSLKPVAARLSELLGKEVKMAPDCVGPDVAALVNALGEGDVLLLENVRFHAAEEKNDADFAKDLSAPFDMFVNDAFGTAHRAHASTEGVTKYLSPSVAGFLMQKELDYLQGAIAEPKRPFAAIVGGSKVSSKIGVIEAMLDKVDKLVIGGGMVFTFLKARGLSVGSSLVEDDQLDLACKLEGIAKEKGVEIILPKDVVVADKFAADAATQVVAADAIPDGWMGLDNGPEATKEIQAALADCKTVIWNGPMGVFEMEAFAKGTFAVADTLAELTSKGCTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVARLD 417          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A3R7XQ30_9PROT (Phosphoglycerate kinase n=3 Tax=cellular organisms TaxID=131567 RepID=A0A3R7XQ30_9PROT)

HSP 1 Score: 617 bits (1591), Expect = 3.470e-209
Identity = 311/398 (78.14%), Postives = 345/398 (86.68%), Query Frame = 1
Query:  139 KLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            K SVGDL + DLKGKKVLVRCDLNVPL  K I DDTRIRAS+PT+++L+ KGA+V LSSHLGRPK+GPEDKFSLGPVA RL+ELLG   +MAPDC+GD V    DA+ +G V+LLEN RFY  E KN  +FAEKLAA  D+FVNDAFGTAHRAH STEGVTK+LSPSVAGFLLQKELDYL GAV +PKRPFAAIVGGSKVSSKIGVIESL+ K DK++IGGGMVFTFLKARGL  GSSLVEED+LELAK+LE  AK  G++ ILPSDV+VAD FAADA TQ V  +AIPDGWMGLDNGPE+TK IQA L ECKTV+WNGPMGVFE+EAFAKGTF IADTLAE+T  GCTTI+GGGDSVAAVEKA LA+KMSHISTGGGASLELLEGKVLPGVAAL +A
Sbjct:    3 KKSVGDLTEADLKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTVKYLMEKGAKVLLSSHLGRPKEGPEDKFSLGPVAPRLSELLGTTVEMAPDCIGDAVTAKVDAMSEGSVLLLENTRFYKEEEKNVPEFAEKLAANADMFVNDAFGTAHRAHGSTEGVTKYLSPSVAGFLLQKELDYLDGAVSDPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELAKKLEVIAKEKGIDFILPSDVIVADKFAADAATQTVSVEAIPDGWMGLDNGPESTKMIQAKLGECKTVIWNGPMGVFEFEAFAKGTFDIADTLAELTGSGCTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALQEA 400          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: L1IFN4_GUITC (Phosphoglycerate kinase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IFN4_GUITC)

HSP 1 Score: 608 bits (1568), Expect = 1.080e-205
Identity = 307/402 (76.37%), Postives = 339/402 (84.33%), Query Frame = 1
Query:  127 AVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            A  KK SVGDLK  DLKGKKVL+RCDLNVPL  K I DDTRIRAS+ T+++LL  GARVA+SSHLGRPKDGPEDKFSL P A RL ELLGKD KMA DC+GD+V K+ D+L DGE+ LLEN RFY  E KNDK+F++KLAAPFD++VNDAFGTAHRAH ST GVT+F+  SVAGFLLQKELDYL GAV  PKRPFAAIVGGSKVSSKIGVIESLL KCDKL+IGGGMVFTFLKARGL VGSSLVEEDKLELAK LE+KA   GV+ ILP+DVV+AD FAADA T+V     IPDGWMGLDNGPE+TK IQ  L +C T++WNGPMGVFE+E FAKGT  +A TLAE T+ G  TI+GGGDSVAAVEKA LADKMSHISTGGGASLELLEG VLPGVAAL DA
Sbjct:    2 AAAKKKSVGDLKGADLKGKKVLIRCDLNVPLDGKKITDDTRIRASVQTLKYLLDNGARVAVSSHLGRPKDGPEDKFSLAPCATRLGELLGKDVKMAKDCIGDDVTKLVDSLKDGEICLLENTRFYKQEEKNDKEFSKKLAAPFDIYVNDAFGTAHRAHSSTAGVTEFIPTSVAGFLLQKELDYLDGAVANPKRPFAAIVGGSKVSSKIGVIESLLGKCDKLVIGGGMVFTFLKARGLNVGSSLVEEDKLELAKSLEKKAAEKGVKFILPTDVVLADKFAADANTKVASVSDIPDGWMGLDNGPESTKMIQKELSDCNTIIWNGPMGVFEFEKFAKGTNDVAKTLAECTSKGAITIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGLVLPGVAALTDA 403          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A7S2ZNW2_9RHOD (Phosphoglycerate kinase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNW2_9RHOD)

HSP 1 Score: 609 bits (1571), Expect = 1.110e-205
Identity = 323/432 (74.77%), Postives = 356/432 (82.41%), Query Frame = 1
Query:   40 GAFVAPSVVKSGLARSSSRAAAP--MQMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALND 1329
            G+F+ P     GL+ + +RAA P  + MMA     K SVGDL  EDL GKKVLVRCDLNVPL    I DDTR+RAS+PTIE+L+  GA+V LSSHLGRPK GPE+KFSL PVA RL+ELLG D  MAPDCVG+EV  I  ++ DG V LLENVRFY  E KND +FAEKLAA  D+FVNDAFGTAHRAH ST GVT+FL PSV+GFLLQKELDYL G V  P RPFAAIVGGSKVSSKIGVIESLL K DKLIIGGGMVFTFLKARGL VGSSLVEEDKL+LAKELE KA   GVE ILP+DVVVADAF+ADA T+VV  D IPDGWMGLDNGPE+TK IQ  L ECKTV+WNGPMGVFE+EAFAKGTF IADTLAE+T +G TTI+GGGDSVAAVEKA LA+KMSHISTGGGASLELLEGKVLPGVAAL++
Sbjct:   10 GSFMRPK----GLS-TRARAARPATVTMMA-----KKSVGDLSGEDLAGKKVLVRCDLNVPLDGATITDDTRVRASVPTIEYLMKNGAKVILSSHLGRPKSGPEEKFSLKPVASRLSELLGVDVTMAPDCVGEEVTSIVSSMDDGSVTLLENVRFYKEEEKNDPEFAEKLAANADMFVNDAFGTAHRAHGSTAGVTEFLKPSVSGFLLQKELDYLEGTVANPGRPFAAIVGGSKVSSKIGVIESLLGKVDKLIIGGGMVFTFLKARGLNVGSSLVEEDKLDLAKELEAKAAEKGVEFILPTDVVVADAFSADANTKVVSVDDIPDGWMGLDNGPESTKMIQDKLSECKTVIWNGPMGVFEFEAFAKGTFDIADTLAELTGNGVTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDE 431          
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Match: A0A7S0Q943_9EUKA (Phosphoglycerate kinase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q943_9EUKA)

HSP 1 Score: 607 bits (1565), Expect = 1.880e-204
Identity = 306/398 (76.88%), Postives = 345/398 (86.68%), Query Frame = 1
Query:  139 KLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIADALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 1332
            K SVGDL ++DLKGKKVLVRCDLNVPL  K I DDTRIRAS+PT+++L+ KGA+V L+SHLGRPKDGPEDKFSLGPVA RLTELLG +  MAPDC+G+ VA   DA+ +G V+LLEN RFY  E KN  +FAEKLAA  D+FVNDAFGTAHRAH STEGVTKFL P+VAGFLLQKELDYL GAV +PKRPFAAIVGGSKVSSKIGVIESL+ K DK++IGGGMVFTFLKARGL  GSSLVEED+LELA +LE+ A   G++ ILP+DV+VAD FAADA TQ V  +AIP+GWMGLDNGP++TK IQA L ECKTV+WNGPMGVFE+EAF+KGTF IADTLAE+T  GCTTI+GGGDSVAAVEKA LADKMSHISTGGGASLELLEGKVLPGVAAL +A
Sbjct:   57 KKSVGDLSEDDLKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTVKYLMEKGAKVLLASHLGRPKDGPEDKFSLGPVAPRLTELLGTEVTMAPDCIGEGVAACVDAMEEGSVVLLENTRFYKEEEKNVAEFAEKLAASADIFVNDAFGTAHRAHGSTEGVTKFL-PAVAGFLLQKELDYLDGAVSDPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELAAKLEKIAAEKGIDFILPTDVIVADKFAADAATQTVSVEAIPEGWMGLDNGPDSTKMIQAKLGECKTVIWNGPMGVFEFEAFSKGTFDIADTLAELTGTGCTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALQEA 453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig898.20519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFP9_ECTSI4.850e-29998.65Phosphoglycerate kinase n=3 Tax=Phaeophyceae TaxID... [more]
A0A835YTR9_9STRA2.690e-21977.55Phosphoglycerate kinase n=1 Tax=Tribonema minus Ta... [more]
A0A836CNP0_9STRA3.450e-21978.85Phosphoglycerate kinase n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UCB1_9STRA6.150e-21875.45Phosphoglycerate kinase n=1 Tax=Pinguiococcus pyre... [more]
A0A7S3AND0_9EUKA1.420e-21178.52Phosphoglycerate kinase n=4 Tax=Eukaryota TaxID=27... [more]
A0A835Z2Y0_9STRA8.760e-21078.50Phosphoglycerate kinase (Fragment) n=1 Tax=Tribone... [more]
A0A3R7XQ30_9PROT3.470e-20978.14Phosphoglycerate kinase n=3 Tax=cellular organisms... [more]
L1IFN4_GUITC1.080e-20576.37Phosphoglycerate kinase n=2 Tax=Guillardia theta T... [more]
A0A7S2ZNW2_9RHOD1.110e-20574.77Phosphoglycerate kinase n=2 Tax=Rhodosorus marinus... [more]
A0A7S0Q943_9EUKA1.880e-20476.88Phosphoglycerate kinase n=1 Tax=Coccolithus braaru... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig898contigEcto-sp13_S_contig898:10110..16870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score848.2
Seed ortholog evalue1.7e-243
Seed eggNOG ortholog2880.D8LFP9
Model size3471
KEGG rclassRC00002,RC00043
KEGG koko:K00927
KEGG ReactionR01512
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Hectar predicted targeting categorychloroplast
Exons7
EggNOG free text desc.phosphoglycerate kinase activity
EggNOG OGsCOG0126@1,KOG1367@2759
Ec32 ortholog descriptionphosphoglycerate kinase
Ec32 orthologEc-01_001350.1
EC2.7.2.3
Cds size1335
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig898.20519.1prot_Ecto-sp13_S_contig898.20519.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig898 12246..16870 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464170.7866287-UTR-Ecto-sp13_S_contig898:10109..122451681464170.7866287-UTR-Ecto-sp13_S_contig898:10109..12245Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig898 10110..12245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464170.8037806-CDS-Ecto-sp13_S_contig898:12245..125091681464170.8037806-CDS-Ecto-sp13_S_contig898:12245..12509Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 12246..12509 -
1681464170.821043-CDS-Ecto-sp13_S_contig898:12872..131441681464170.821043-CDS-Ecto-sp13_S_contig898:12872..13144Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 12873..13144 -
1681464170.8364182-CDS-Ecto-sp13_S_contig898:13440..134881681464170.8364182-CDS-Ecto-sp13_S_contig898:13440..13488Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 13441..13488 -
1681464170.8495526-CDS-Ecto-sp13_S_contig898:14050..142751681464170.8495526-CDS-Ecto-sp13_S_contig898:14050..14275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 14051..14275 -
1681464170.8649654-CDS-Ecto-sp13_S_contig898:15625..158591681464170.8649654-CDS-Ecto-sp13_S_contig898:15625..15859Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 15626..15859 -
1681464170.877222-CDS-Ecto-sp13_S_contig898:16144..163631681464170.877222-CDS-Ecto-sp13_S_contig898:16144..16363Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 16145..16363 -
1681464170.8926718-CDS-Ecto-sp13_S_contig898:16797..168701681464170.8926718-CDS-Ecto-sp13_S_contig898:16797..16870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig898 16798..16870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig898.20519.1

>prot_Ecto-sp13_S_contig898.20519.1 ID=prot_Ecto-sp13_S_contig898.20519.1|Name=mRNA_Ecto-sp13_S_contig898.20519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=445bp
MKIVCAALCVQAVGAFVAPSVVKSGLARSSSRAAAPMQMMADAVVKKLSV
GDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGAR
VALSSHLGRPKDGPEDKFSLGPVAERLTELLGKDCKMAPDCVGDEVAKIA
DALGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAH
CSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKI
GVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEK
AKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKE
IQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITADGCTTIVGG
GDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA*
back to top

mRNA from alignment at Ecto-sp13_S_contig898:10110..16870-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig898.20519.1 ID=mRNA_Ecto-sp13_S_contig898.20519.1|Name=mRNA_Ecto-sp13_S_contig898.20519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6761bp|location=Sequence derived from alignment at Ecto-sp13_S_contig898:10110..16870- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATTGTGTGCGCAGCATTGTGTGTCCAGGCGGTCGGCGCCTTCGT CGCGCCCTCCGTGGTGAAGTCCGGTGAGTTGTTGGTCTAGGTCGTGAGTG TCGAGTGGATCGGAATCGCGCCCATTCCTGTCATGTTGACGACAGCACAT GCATCATGCATGCGTGTGTTTGTTTTCACACCAAAAACGGGCATGCGCTT CACTTGTTGTTGGGTAAGAACACGAGCGCTACGGTGCGCACTCGTGAGGC ACCGACGCACAGAAGGCTCGAGATCACACTCGCCTGTATCGCTCGAGCGA GTACCTTTGCCCGACCCCTGGCTGTGCCTCTGAACATGAAGGAGCGTGAA AAAGAACACACCCTATCGCCGCTCGACCGCACGTGGGTGCGTATGTATGC GTACGAAAGCATTTTTTTTTTTGTGTCAAGACAGGGAGTCCCTCATCTCG CCACACGGCGGCACTGCTGCTCTATCTCTCTCTGTCCCTTTGTGCTCTGC TCCGCAGGCCTGGCCAGGTCGTCCTCCAGGGCGGCCGCCCCCATGCAGAT GATGGCGGACGCGGTGGTGAAAAAGCTCTCCGTGGGCGACTTGAAGGATG AGGACCTCAAGGGAAAGAAGGTGCTGGTGCGATGCGACCTCAACGTCCCC CTTAGCGACAAGGTGATCGGCGACGACACCCGCATCCGCGCGTCCATCCC CACCATCGAGCACCTCCTCAGCAAGGGTAAGGTCGCCGGCCGGCCATCTG TCCGTTGTTGTGAATAGAGAGCGTAGCCTGACTGGTGGTTGAAACCATTC CCCATCAGTAATGTCGTTGCAATCTGGGGTGTCTCAGAATCTTGCCGAAA TCTAGCTGTCCCCCTTTTGTCTCCCTCTCTTTGCCCCCCTGTGGGCACGA ACTTCGATCGTTTTCTGTTGTGTTACACGGAACACACCGGCCCGCCGCGC ACCGCTCACAATTTGGTGCTGCCGCTGCCGTCGTGACGACACACAAATGA CTCCTCGACAGGCGCACGAGTCGCCTTGTCCTCGCACCTCGGGCGACCGA AGGACGGCCCGGAGGACAAGTTCTCCCTTGGGCCCGTCGCCGAGCGGTTG ACGGAGCTCTTGGGCAAGGACTGCAAGATGGCGCCGGACTGCGTGGGCGA CGAGGTGGCCAAGATCGCCGACGCCCTCGGCGACGGGGAGGTGATGCTCC TCGAGAACGTCCGCTTCTACCCGGCGGAGACGAAGAACGACAAGGGTGAG AGGAGCGAACAGCAGCCGCAGTCATTCACCCTCGCATGTACGCACGTGGA TATCCATCGTGCGCTTCTTGTACACTCGCGAGATCATGTGTACACACAGC CGCAAAGCCCACTCGCGTGGTGGTTGATGGGGCTTGAGGCGCCGCAGGAG TAGACACTCGGCGTTTTGACCGCGAGATAACCCGAAGACGATCGATCAAT CCTACATGCGTATCTGCTTCTTCGTACTTCATGATCCGTTTTTTTTTTTT TTTTTTCCCGTGACACACGTCATCCCCTCGGTTGGGTGTTTGGGGCGAAA ACTTTTACTCTCCACGTCACCCAAATGATGGAACCATGTGTCATTGAACA TCAACATGAGCGTCTAGGCTGTGTCTGGTTGTCGCGGTGGTGTACTGTTT GGCACCGTGAGCCTTGACGAGAGTGCCGGTCGACAACACAGCAGCAGTAG CATACGACCTTATCCGCACGTTGTCAGGCACCTGATACTGCTTTATCCTT TAATGTATCGCATGAACGAGCTTCAAGAACGCGCGTGTGGACATGCCCAC TGGCGATGGATGAGGTGGCGTCTCATGTTTAAATGTTTTGCTCCTGAGCG GACATAAGCAAGAACGTCACACAAGAGAGAAGATAGATAACTACCCAGGC CAGACTGCTGTTGACCAATACTGCTGTTTCATAAACTACTCACATCTATG GGTGAACCTCGCGTGCTGGGCGCTTTTCCTGGCACATGCACTGCTGTTGC TGCAGTAGTCTGTGGCATTATGCGAGAGAGTGTTCCCTGCTGTTGCGAAA TTTAGAAACCCGAGTTGGTCCGGTTGCAACATACAAGGGCGAGTAGTGCT TCCAACACTCACACATCGACGACACCAGGTCCTTGGACATGCAGCCTCGG CTCGAAGATGCAGCCGCTAATTTACATCTAGATGGGTCGTCACGCCAAAC CCCTCGCTCACCCCTTTCCAGCTGCACATTCTACTGCTGGTTCCTTCTAC TTGATTCTCAGGGTCGTGTGCACATGCATACATCCAGGAACAACCGTGTG TATGAGTCACTCTTCCAAAGCCTCGCCCACCGCTTGCACAGCTGCCTAAT ACTGCTGCTGATCCTTTTATCCACTGCTACACTCTCGACCCGCTACACCC ATGAACATATCACGAGTGTTCGACCAACAGCAGTAGTCACTTGTAAACCC TCGCCTACCCCTTCCAAAGCAGTACAAGTAGTAGCCCAATACACTGTTGT TGCTGCTTTCATGCCCTACAACATTTACCTGGTATTATCTTAACCTCGAA TGCATACAACCACGAACATCTCGCACGCGCGCGACACAAACACAGACTTC GCGGAGAAGCTCGCCGCGCCGTTCGACCTGTTCGTCAACGACGCCTTCGG TACCGCGCACCGCGCCCACTGCTCCACCGAGGGCGTGACGAAGTTCCTCT CACCTTCCGTAGCCGGGTTCCTGCTGCAGAAGGAGCTCGACTACCTCGCA GGCGCCGTGCAGGAGCCCAAGAGGCCCTTTGCTGCTATCGTCGGTGGCTC CAAGGTGTCCTCCAAGATCGGTGAGATGTTTGTTTATCGAGAATGGTCAA TCGTATGTACGTGCAATCACTCTGAAAATGACAGCCCGTTCGAGATAATG CCACAGCAGTAGTCGAACGGGATGTGCTGGAGTCTTGAATAGAAGGTTTT TGTTGTGGCATGCATGTATACGACGTTTCTTACCGCGAACTGGCGATGCC TTTTTTGGTGTTTCTTTCATTTTTTTGTCCCCTCGAGAAAGATACTACAT TCTCGACCACGGAAACAGACTAATTACCCGTTGGAGATTAAACTTGGTTC GTGTTGGTCTGGGCTGTTGAGGTTTGTAATAAAAATGCGTGCCTTCCACG AAATTGTTCACTTGGGGGCACGTTGCCGGAAGCGTCCGAGGTCCAGCGTC GGTACCGTCTTGATGCTTGTGTTCTCCGGCCTGAACCTAACTCTAGTCTG CAAAAGGATACGTGAAACACGAGTGCATACGAGGGAGACATGCTGACGAC GGGACGGCCTACTGCTGTGATGATGACTGCTGTGCTAACATGACACTCGG TGTTTTTTTTTTTTTTTTTTTTTGTGGCACAGGTGTGATCGAGTCTCTCC TCGCTAAGTGCGACAAGCTCATCATCGGCGGTGAGTTAGCTGTACCCTGT CGAAAACTGAAAATTGTGCAGCCGGTTAGGTTTTACGATTTTTGAGGCAA GTGAATCTTTGGGCTAAGTAGGCAATTCCGCACGTTTACATAGACAGTGC TCGAGTTCATGTTTATAAAGACAGAGCTCGCGTTTATTATTAGAGGACGG ATTTTTCGAGCCACAATGGCTCTCTCCCATTCATCGACCTTGCTGGCGGC CATGCTTGTCCCGCACCCAGCGAAGAGAAACAGTAAGTTGATACAGAGGG CCCCTCCCCCCCCCCCCCTGCTCCAGGCGGCATGGTGTTCACCTTCCTCA AGGCCCGCGGCCTCGGCGTTGGTTCCTCGCTCGTCGAGGAGGACAAGCTC GAGCTCGCCAAGGAGCTGGAGGAGAAGGCCAAGACCGCCGGCGTGGAGAT CATCCTCCCCTCGGACGTGGTCGTCGCTGACGCCTTCGCCGCCGACGCTA AGACCCAGGTGGTGAAGGCCGACGCAATCCCCGACGGCTGGATGGGGCTG GACAACGGACCCGAAGCGACCAAGGAGATCCAGGCCGCCCTCAAGGAGGT AGGGAGGAGATTGCTGTAAGTAGATGCACACGCTCCCAGGAAGATAAGGA GAGGGATGTTCTTCTGGCAAAGTTTTGTTTGTAGACGTCACTTACTCCGG TCGTAAAGGGAGGGGACCGATCTAGGCGTCTCTTGTTGTGTTGGGGTGTC TTCGAGTGTCCAGACTCGTGGCGTGACCCCTTACGCTCCCTCGTTAATGT GTGTAATCCGTTTCAACTCCCTCCCGCCGGATCCGTGAACAACAATTAGA TGTTGTGTTCTGTTGCGAAACATGAAATCAACGATGCCAAGACCGATGCC CTTCGTTATTCTTAACCTTTTTTCCAACTTGCCGAATCCGTGTGCCGACA ACTCTCCTCAGTGCAAGACCGTGGTGTGGAACGGACCGATGGGCGTGTTC GAGTACGAGGCGTTCGCAAAGGGAACCTTCGCCATTGCGGATACCCTGGC CGAGATCACCGCTGACGGCTGCACCACCATCGTGGGCGGCGGCGACTCCG TGGCGGCCGTAGAGAAGGCCAACCTCGCCGACAAGATGTCGCACATCTCC ACCGGCGGCGGTGCCTCGCTCGAGCTTCTTGAGGGCAAGGTGCTCCCCGG CGTGGCGGCGCTCAACGACGCTTAATTCCAAAGGTCGCTTTTGAGATGTA GTCAGGTGGTGGTGGTCGTTTTTTTTGTTCATGTGCGTGGGAAGTAGAAA AGAACGCCCCCTTTCTGTTTGGACGAGGAAACCCCCACCTCTTTTAGGTG TTCGTTTCATTCGGTCTCTTTGTCGTGGGAAGAGCCGGACGGGAGGGGAC TTGACGTGATGTAGTCTTGCGATGGCTGCTAGCTATAGAGCTAGCTGTGT CTATCCAGAGGCGTGGGTGACTTACTTTGGGAGTAGACTCCCTAACGTCA CCGTCGCGAAAATCAATTTTGGGAGGGGAGGGGGAGGGGGGGCAGGTGTT GCTGGTGAAAGCCCGGAACACTTGAGTGTAGCTAGGTGGTCTGACTCACC AGACCCCCGGTTTTTACACGGATTTAGCTTTTTTTAGAGATGATGGGGGG TATTAGATTCTGTTGACCAGGCAAAATAGACACGTGAAAAGAACGACACT CGCTCTCTTGTTAAGGATTTCCAGAGTGGGGGCCCCACTGGGAGACCGGT CATTTGGCTTTTTAGATTCGTTTGTAGATCACGGAATCGGAACTGAAGTG AAGCACGCATGCGTGCACATGAGGTCGAACTGGGGTTAGTAAAACTCACC GAAGGTTTGGCGATGTTGTTCTTATTTTTTTGTGGTGGACGGGCTCTCCG AAGTCTTCTCCAAAGGATTGGAGAAAATCGTTTTTCGCGCGAAGCGCGCG CGCGTTGTCCGGGCGCACACGGGCGAGATCAACATTTTCGTCCTTCACGT GCGATGTGGACACATCAGTGACCCATGACAAGGAACACAAGCTGTACGTG GCACGTCCGAAGATTTGATACCTTGCTCAGGTAGAGAACAAACATGTGTA CACATAAATTCAGAATCGTGATCGATTGGTTGTTGGTGTGTCTTGCGTCT TTTGCCTCACTCTGGTTGGCATTCTCGTACGACGCAGATCATGCCCCCTA AGAGTGTGCCCACACGCCTAGAAACAGGGAAGAAAAGGAGGCACGAAAGG GGAGAGCAAGATACCAACACCACGCAACATCGATGCCCTTGACACATGCT ACACTAGTTTTCTCTTGCTCACGCTCACGTGACTGGTATGATCGGGCATT GTGCACGGGCTTTTTCATTGGCGAAACGTCTGCTTTGGTTCCGAAACGAG ACCCTTGGTTCAACGCCTAAGTCGTAAGCAAATGTGCTAGTTTAGCCCCA TGTTCTAGGAAGCGGAACCAGCAACGGGCATCGAACCCCCCACCTCCTGC TAGAAGAAAGGATTCGATTTGTCCTTTGTGAGATCGGTACGGTTAGGTTT CACAGTAGTATACTAAGCAGGGGGGCCAACGGTTAGGTTTCACAGTATTA TATGAAGCAGGGGGGCTGATTGGGATTGATTATTATTCACGGCCCCAACC CTACCCCAACCCTCCTCCTCACACCTGCAGCATCGCACATCACCTCAACA TCCAAATCTCCCAGGGGACCAGCACGGTTGCCCGAGGCAAGCTGCGATAC AATATTTCCAAACACAAATAAAAAACACCACGAACAATGAAAGCCGCGTT TCATTCACGAAGAGCGCCGGGACCACGCATCAGTATTTTGCTGTCCGCAG CGTGTTTTCAACCTGGGGAGGAAGAACTCTTCTCGTCAACGACGCCGAAG CAGCGCCTCTAACGTCGTGCCGTGATTCGCATGGATGTATGTGTGCACGC GCGCAAGCAAACTCCAGCCACCAGACGCGACCCTCGTGTCGTTCTGCACG AGGCACGGATGGATGTTGTTATCTAACCTTAGCTAGACCTGTCTAGAAAC AAACGATCATTCCAAAAAAAAAGAAGTTAGGGTCGTGAAAACAATCACCC GGTCACCTCGTCGGTTGGTTCTTATGACCTCGAGGAGCAGAATTACCACC GATCGATGCGGACTTCTCCGGGAAACGCTGGTGATGTGTATACGCAGTCT TCCCCACCCACCCCTGTTGGCAAAACGAAACGCCTTCGATCGCATCTTGG TCGCACGCTGCTACAACACGTAGACCTGCACCCCCCCCCCCCCCCGCGCC GCGCACCCTTCATGCGACTCGCCGAAGACCTCACGGTGCTTCGCGCTTGG TCTCGCGCTTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig898:10110..16870-

>mRNA_Ecto-sp13_S_contig898.20519.1 ID=mRNA_Ecto-sp13_S_contig898.20519.1|Name=mRNA_Ecto-sp13_S_contig898.20519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp13_S_contig898:10110..16870- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATTGTGTGCGCAGCATTGTGTGTCCAGGCGGTCGGCGCCTTCGT
CGCGCCCTCCGTGGTGAAGTCCGGCCTGGCCAGGTCGTCCTCCAGGGCGG
CCGCCCCCATGCAGATGATGGCGGACGCGGTGGTGAAAAAGCTCTCCGTG
GGCGACTTGAAGGATGAGGACCTCAAGGGAAAGAAGGTGCTGGTGCGATG
CGACCTCAACGTCCCCCTTAGCGACAAGGTGATCGGCGACGACACCCGCA
TCCGCGCGTCCATCCCCACCATCGAGCACCTCCTCAGCAAGGGCGCACGA
GTCGCCTTGTCCTCGCACCTCGGGCGACCGAAGGACGGCCCGGAGGACAA
GTTCTCCCTTGGGCCCGTCGCCGAGCGGTTGACGGAGCTCTTGGGCAAGG
ACTGCAAGATGGCGCCGGACTGCGTGGGCGACGAGGTGGCCAAGATCGCC
GACGCCCTCGGCGACGGGGAGGTGATGCTCCTCGAGAACGTCCGCTTCTA
CCCGGCGGAGACGAAGAACGACAAGGACTTCGCGGAGAAGCTCGCCGCGC
CGTTCGACCTGTTCGTCAACGACGCCTTCGGTACCGCGCACCGCGCCCAC
TGCTCCACCGAGGGCGTGACGAAGTTCCTCTCACCTTCCGTAGCCGGGTT
CCTGCTGCAGAAGGAGCTCGACTACCTCGCAGGCGCCGTGCAGGAGCCCA
AGAGGCCCTTTGCTGCTATCGTCGGTGGCTCCAAGGTGTCCTCCAAGATC
GGTGTGATCGAGTCTCTCCTCGCTAAGTGCGACAAGCTCATCATCGGCGG
CGGCATGGTGTTCACCTTCCTCAAGGCCCGCGGCCTCGGCGTTGGTTCCT
CGCTCGTCGAGGAGGACAAGCTCGAGCTCGCCAAGGAGCTGGAGGAGAAG
GCCAAGACCGCCGGCGTGGAGATCATCCTCCCCTCGGACGTGGTCGTCGC
TGACGCCTTCGCCGCCGACGCTAAGACCCAGGTGGTGAAGGCCGACGCAA
TCCCCGACGGCTGGATGGGGCTGGACAACGGACCCGAAGCGACCAAGGAG
ATCCAGGCCGCCCTCAAGGAGTGCAAGACCGTGGTGTGGAACGGACCGAT
GGGCGTGTTCGAGTACGAGGCGTTCGCAAAGGGAACCTTCGCCATTGCGG
ATACCCTGGCCGAGATCACCGCTGACGGCTGCACCACCATCGTGGGCGGC
GGCGACTCCGTGGCGGCCGTAGAGAAGGCCAACCTCGCCGACAAGATGTC
GCACATCTCCACCGGCGGCGGTGCCTCGCTCGAGCTTCTTGAGGGCAAGG
TGCTCCCCGGCGTGGCGGCGCTCAACGACGCTTAA
back to top