mRNA_Ecto-sp13_S_contig896.20497.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: D8LFD1_ECTSI (PfkB-type carbohydrate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD1_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 2.790e-151 Identity = 229/250 (91.60%), Postives = 235/250 (94.00%), Query Frame = 1
Query: 1 MRDAWFRAGVGAQTLAVAHCWLLYPGTGKRACGPLTNININ----ISNGGARSVALSSPDRIRSLSQGSGGGGLCSALGPAMSEGQAVDEVDSSERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGV 738
MRDAWFRAGVGAQTLAVAHCWLLYPGTG+ CGPLTN+N I NGGAR++ALSSPDRIRSLSQGSGGG LCSALG AMSEGQA+DEVDSS RPRVLGLGSAGVDFIAAVDRYPTADEKV+TQ LQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLD VAAVHLDSRHTPAAVALAKLANER V
Sbjct: 1 MRDAWFRAGVGAQTLAVAHCWLLYPGTGR--CGPLTNVNXXXXXXIFNGGARNLALSSPDRIRSLSQGSGGGRLCSALGTAMSEGQALDEVDSSGRPRVLGLGSAGVDFIAAVDRYPTADEKVQTQSLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDVVAAVHLDSRHTPAAVALAKLANERSV 248
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: A0A6U4SHY2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4SHY2_HEMAN) HSP 1 Score: 236 bits (603), Expect = 7.640e-72 Identity = 129/269 (47.96%), Postives = 173/269 (64.31%), Query Frame = 1
Query: 163 PDRIRSLSQGSGGGGLCSALGPAMSEGQAVDEVDSSERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVVTREKDQP 969
P R ++SQ GGGGL + + A + D + ++LGLG A VDFIA VD YP D+K+R+ L V+GGGN N+L+A RLG++ L TK+G D NG LI + L +GVD + + S FTY++VD TRTC+HTP ED+LP+EI D+LDGV+ VHLD R+T AA LA++ANE VPV+LD EK+RP ++ +LPLADY+I N +PQ F + G E + LLEQGRA+ V TTLGA+G ++ R D P
Sbjct: 35 PRRAVAVSQ--GGGGLLTMMTGAKKAAEPPAVPDHLKGKKLLGLGIAAVDFIATVDAYPKPDDKIRSTSLSVMGGGNAANSLTACRRLGVECSLLTKLGQDDNGDLIRKELNRDGVDTTLCVTKAGLDSPFTYILVDSSTQTRTCIHTPIQEDLLPDEIPKDVLDGVSVVHLDGRNTLAAARLAEMANEAKVPVLLDIEKERPDIEKVLPLADYIITNTQYPQIF--KEGASTEEGMVA-LLEQGRAKWVITTLGADGSQMMRRTSDDP 298
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: L1K4H8_GUITC (PfkB domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4H8_GUITC) HSP 1 Score: 229 bits (584), Expect = 1.350e-69 Identity = 113/228 (49.56%), Postives = 154/228 (67.54%), Query Frame = 1
Query: 280 RVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVVTREKD 963
RVLGLG A VDFIA VD +P D+K+R+ + GGGNC NTL+ RLG++A LATK+G DANG I+ L ++GV S I + S FTY+IVD TRTC+HTP E++L EE+ + LDGV+ +HLDSR+T A++ LAKLA ER +PVVLDAEKDRP++++LLPLAD ++ N +P F V G ++ LL+ G A+++ +T G GC + R +D
Sbjct: 19 RVLGLGVAAVDFIATVDHFPQPDDKIRSTSFSMQGGGNCANTLTCVRRLGVEAILATKLGKDANGNSIISELNDDGVSTSLCICKEGLDSPFTYIIVDDATHTRTCIHTPIQEELLEEEVAAEWLDGVSLLHLDSRNTRASIKLAKLARERSIPVVLDAEKDRPYMRELLPLADVIVTNSKYPLVFDSAGFVQG----MQALLQLGSAKMIISTQGDRGCTALVRGED 242
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: A0A7S3ENN4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENN4_9RHOD) HSP 1 Score: 228 bits (581), Expect = 4.540e-69 Identity = 115/250 (46.00%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 220 LGPAMSEGQAVDEVDSS-----ERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVVTR 954
+ P S+ AV VD++ +V+GLG+A +D +A+VD +P D+K+RT +V GGGNC NTL+A RLG+ + TK+G D G+ I L+ +GVD S VIV S FTYV+ ++ GGTRTC+HTP ++LP E+ P+ LD +HLD RHT AA+ +AKLA ERGVP+ LD EKDRP +++LLPLAD++I N+ +P F G D + + LL GRA+ V TTLGA+G +++ +
Sbjct: 5 MSPGRSKPVAVKMVDNAVPTELRSLKVVGLGAAAIDLLASVDTFPNPDDKIRTVSFEVAGGGNCANTLTAVRRLGIPCSILTKIGDDGTGKQITSELDGDGVDTSNVIVQRNMNSPFTYVLTERAGGTRTCIHTPAESELLPSEVKPEWLDEADHLHLDGRHTQAAIEMAKLAIERGVPISLDVEKDRPHIRELLPLADFIITNQRYPTVF----GEDVYRG-MHTLLRLGRAKFVVTTLGADGSLLMCK 249
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: W7TU72_9STRA (Pfkb-like carbohydrate kinase family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU72_9STRA) HSP 1 Score: 229 bits (585), Expect = 4.850e-69 Identity = 120/228 (52.63%), Postives = 158/228 (69.30%), Query Frame = 1
Query: 265 SSERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVV 948
S + P+VLG+G GVD +A V+ YP AD K+RT ++ GGGN GNTL+ RLG+ + TKVG+DA G +IL+ +G+D VI S FTYVIVD G TRTCLHTP +ED+ +EI P +LDGV +HLD R+T AA+ LA+LAN RG+PV+LDAEKDRP L++L+PL D++ N FP+AFTG E + +LL+ GRARLV TTLGA+G +V+
Sbjct: 49 SVKPPKVLGMGITGVDLLAYVETYPAADAKIRTSDFKIQGGGNAGNTLTGLCRLGVRTEILTKVGNDAYGSMILEEFAIDGLDTRHVIRKAGISSPFTYVIVDMAGQTRTCLHTP-SEDLTEDEINPAVLDGVDFLHLDGRNTLAAIRLAQLANARGIPVMLDAEKDRPHLRELVPLCDFLATNAVFPKAFTGAAST---EEGMARLLDMGRARLVFTTLGAKGSMVM 272
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: R7QG38_CHOCR (PfkB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG38_CHOCR) HSP 1 Score: 221 bits (563), Expect = 7.540e-66 Identity = 112/229 (48.91%), Postives = 151/229 (65.94%), Query Frame = 1
Query: 280 RVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVVTREKDQ 966
RVLGLG +GVD +A VD YP D+KVRT + VLGGGN NTL+A RLG+ L +KVG D G +Q L+ +GVD S V+ + ++FTYVIVD + TRTC+ T ED+L EI +LD + V LD RHT AA+ LAK A RG+P++LD E++RP+++DLLP ADY++ N +P F+ G G +A+ LLE A++V TTLG+ G I+V RE D+
Sbjct: 60 RVLGLGMSGVDILATVDGYPKPDDKVRTTSVSVLGGGNTANTLTAVRRLGMPCALVSKVGKDMYGSAAIQELQGDGVDTSLVLAKEGVNTSFTYVIVDTKNDTRTCISTASNEDLLVSEIDESMLDNASLVVLDGRHTLAALQLAKFAKNRGIPILLDVERERPYIRDLLPYADYIVTNSVYPFVFSP--GATGKVDAMEMLLEACDAKMVITTLGSSGSIMVQRENDR 286
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: A0A7S1T7S5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7S5_9RHOD) HSP 1 Score: 212 bits (539), Expect = 6.760e-62 Identity = 105/227 (46.26%), Postives = 147/227 (64.76%), Query Frame = 1
Query: 274 RPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQGRARLVATTLGAEGCIVVTR 954
RP VLGLG+AG+DF+A V +P D K+RT ++LGGGNC NTL+ SRL + + L +K G D NG I LE +GV+ ++ S FTYVIVD + TRTC+HTP TED+L ++ P++LDGV VHLD RHT AA+ +A+ A +R +PV LD E+DRP ++DL+PL D++ NR +P F + ++ LL GRA V TTLG++G ++ +
Sbjct: 85 RPHVLGLGTAGLDFLAVVSSFPQPDTKIRTSEFKMLGGGNCANTLTGLSRLQIASSLVSKCGDDVNGNQIAAELEADGVNTRYLVRKAGMYSPFTYVIVDAQENTRTCIHTPATEDLLLSDLAPEMLDGVDLVHLDGRHTTAAIQMAQWAVDRAIPVALDVERDRPGIRDLIPLVDFIFTNRQYPGIFAPTEAT--LTDQMQALLRCGRATSVTTTLGSDGAALLCK 309
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: M1V792_CYAM1 (Similar to ketohexokinase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V792_CYAM1) HSP 1 Score: 211 bits (538), Expect = 2.550e-61 Identity = 115/244 (47.13%), Postives = 156/244 (63.93%), Query Frame = 1
Query: 241 GQAVDEVDSSERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEIT--PDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHE----NAIRQLLEQGRARLVATTLGAEGCIVVTR 954
G +D + P VLGLG+ +D++A V+RYP DEK+R+Q L + GGGN NTL+A +RLG+ LATK+G DA GR IL L+ EGVD S V + S TYVIVD TRTC+HTP E++L ++ L + VA VHLDSRHT AA+ALA+ A +RG+PVVLD EKDRP DL+ LADY+I N +P F+ + G+ + + + +++ GRA +T GAEG ++V R
Sbjct: 89 GVRMDHRKPTSGPVVLGLGATALDYLATVERYPQPDEKIRSQSLTIQGGGNVANTLTALARLGVATRLATKLGDDAIGRDILAELQHEGVDTSFVAIKTNMNSPITYVIVDASTRTRTCIHTPAAEELLASDVVNRDALWERVALVHLDSRHTSAALALAREAVQRGIPVVLDIEKDRPHALDLVALADYIITNATYPLHFSAQPGMSANRLTALSGLVAIMDYGRAAFAISTQGAEGSLMVRR 332
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: A0A5J4Z8Y0_PORPP (Ribokinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8Y0_PORPP) HSP 1 Score: 209 bits (531), Expect = 1.240e-60 Identity = 110/225 (48.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query: 283 VLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEITPDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQLLEQ-GRARLVATTLGAEGCIVVTR 954
VL LG+ VDFIA V ++P D+KVRT+ L VLGGGN NT + +RLG ++VG+DANG+ L L EG+DVS V S + FTYVIVD++ TRTC+HTP ++ P+++ +LDG++ VHLD RHT AA+ LAK AN RG+PVVLD EKDRP +++LLPL DY++ N +P F+ G +AI +LLE R + V TT GAEG ++ +
Sbjct: 83 VLVLGAVCVDFIARVQQFPQPDDKVRTESLDVLGGGNAANTATCLARLGAQVRFVSQVGTDANGQGCLDELAAEGIDVSYVCRSAQVDTPFTYVIVDEQTQTRTCIHTPSALELGPDQLDESMLDGISLVHLDGRHTLAAIQLAKWANARGIPVVLDVEKDRPHIRELLPLVDYIVTNAKYPLLFSPDSL--GRRDAISKLLESCERVKFVLTTNGAEGSTMMRK 305
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Match: A0A7J7IJF7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJF7_9RHOD) HSP 1 Score: 208 bits (530), Expect = 4.680e-60 Identity = 112/238 (47.06%), Postives = 155/238 (65.13%), Query Frame = 1
Query: 265 SSERPRVLGLGSAGVDFIAAVDRYPTADEKVRTQFLQVLGGGNCGNTLSAASRLGLDACLATKVGSDANGRLILQGLEEEGVDVSRVIVSDATPSAFTYVIVDKEGGTRTCLHTPQTEDILPEEIT--PDLLDGVAAVHLDSRHTPAAVALAKLANERGVPVVLDAEKDRPFLKDLLPLADYVICNRNFPQAFTGRCGVDGHENAIRQ----LLEQGRARLVATTLGAEGCIVVTREK 960
+++ P VLGLG+ +D++A VDRYP DEK+R++ + GGGN NTL+A +RLG++ L TK+G DA GR IL LE EGVD S V + S TYVIVD+ TRTC+HTP E++ +++ L + VA V LDSRHT AA+ALAK A RG+P++LD EKDRP+ +LL LADY++ N +P F G+ G H +I +LE GRA+ V T G EG ++V +++
Sbjct: 98 AADTPVVLGLGATAIDYLATVDRYPQPDEKIRSRSFTIQGGGNVANTLTALARLGVETRLLTKLGDDAIGRDILADLESEGVDTSFVAIRSNMNSPITYVIVDESTRTRTCIHTPAAEELTAADVSNCEALWNRVALVLLDSRHTLAALALAKEAIARGIPIMLDIEKDRPYALELLSLADYIVTNATYPLKFKGQPGETSHHLSILTGLVAMLEYGRAQFVIGTQGEEGSLMVQQKR 335 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig896.20497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig896.20497.1 >prot_Ecto-sp13_S_contig896.20497.1 ID=prot_Ecto-sp13_S_contig896.20497.1|Name=mRNA_Ecto-sp13_S_contig896.20497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp MRDAWFRAGVGAQTLAVAHCWLLYPGTGKRACGPLTNININISNGGARSVback to top mRNA from alignment at Ecto-sp13_S_contig896:16014..20725+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig896.20497.1 ID=mRNA_Ecto-sp13_S_contig896.20497.1|Name=mRNA_Ecto-sp13_S_contig896.20497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4712bp|location=Sequence derived from alignment at Ecto-sp13_S_contig896:16014..20725+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig896:16014..20725+ >mRNA_Ecto-sp13_S_contig896.20497.1 ID=mRNA_Ecto-sp13_S_contig896.20497.1|Name=mRNA_Ecto-sp13_S_contig896.20497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig896:16014..20725+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |