mRNA_Ecto-sp13_S_contig893.20456.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A6H5L3X9_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X9_9PHAE) HSP 1 Score: 876 bits (2264), Expect = 6.320e-314 Identity = 520/546 (95.24%), Postives = 526/546 (96.34%), Query Frame = 2
Query: 62 VMATSGARVLLRLRKTGAVPRLRRAEATWQYGRRSASGVTTTARQSSSSSHPGHFLRSAPAAAPWRRARATGFGVLLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAAXXXXXXXXXXXXXXXXXXXV---VAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
+MATSG RVLLRL KTGAVPRLR AEATWQ+GRRSASGVTTT RQS+SSSHPGH LRSAPAAAPWRRARATGFG+LLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAY AFVKADAAGEVD AALG XXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLF+PAARHMAQSKGIDASSLEGTGKGGRITK DLVLA+AKGVEFPAAAKAA XXXXXXXXXXXXXXXX VAPPV P SSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACE DGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQS ESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM
Sbjct: 1 MMATSGVRVLLRLCKTGAVPRLRPAEATWQHGRRSASGVTTTTRQSNSSSHPGHILRSAPAAAPWRRARATGFGMLLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYAAFVKADAAGEVDFAALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFSPAARHMAQSKGIDASSLEGTGKGGRITKTDLVLAMAKGVEFPAAAKAASSQXXXXXXXXXXXXXXXXXXXXVAPPVVPSSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSSESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 546
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: D7FM36_ECTSI (Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM36_ECTSI) HSP 1 Score: 794 bits (2050), Expect = 5.040e-271 Identity = 463/550 (84.18%), Postives = 465/550 (84.55%), Query Frame = 2
Query: 50 GVYCVMATSGARVLLRLRKTGAVPRLRRAEATWQYGRRSASGVTTTARQSSSSS-HPGHFLRSAPAAAPWRRARATGFGVLLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAAXXXXXXXXXXXXXXXXXXXVVAPPVA--PPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
G VMATSGARVLLRLRKTGAVPRLR AEATWQ+GRRSASGVTTTARQSSSSS H GHFLRSAPAAAPWRRARATG G+ LPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVED DAY AFVKADAAGE SKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAA XXXXXXXXXXXXXXX P SSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACE DGLMAFRK LQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM
Sbjct: 772 GRLSVMATSGARVLLRLRKTGAVPRLRPAEATWQHGRRSASGVTTTARQSSSSSSHAGHFLRSAPAAAPWRRARATGIGMQLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDADAYAAFVKADAAGE-----------------------------------------------------------SKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAASSQAXXXXXXXXXXXXXXXXXXXXXXXXPSSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKALQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1262
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A835ZCE2_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE2_9STRA) HSP 1 Score: 441 bits (1133), Expect = 9.420e-140 Identity = 290/469 (61.83%), Postives = 336/469 (71.64%), Query Frame = 2
Query: 332 FTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFP------------AAAKAAXXXXXXXXXXXXXXXXXXXVVAPPVAPPSS---------SGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSG--GARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPG-REAGD----KPRVCSEVTVRLSADRRVVDEAIAAQLLQSF 1654
FTVVNMPALSPTME+GT+T+WH PG L+ GDV+CDVETDKATVAF+VQ+DGVLA+I+ + G GEV VGSPVAV VED AY AF KADAAG + + G XXXXXXXXXXXXX+N R+VPE F ++PAARH+AQSKGID SL G+G+GGR+TK+DL+ ALA G EFP AAA A XXXXXXXXXXXXXXXXX + D D PANNI+K+ AKRL QSKA VPHLYVS CE D L+A RK L H KVSVND++IR+AALALRDVPEANA+WS GA ++D+SVAVATPTGLITPIVT A +RGL NIS VRDLA RA++ +LKPEEFQGG+FT+SNLGMFGI EFSAVIN PQACI+AVGGG +V PG R+A PRV + +T +LSADRRVVDEA+AAQ LQ F
Sbjct: 79 FTVVNMPALSPTMETGTITKWHAQPGTALAPGDVLCDVETDKATVAFEVQEDGVLAKILVQEGGGEVKVGSPVAVTVEDEAAYDAFTKADAAGSLPYFS-GEDAPSATDSQPQAPAAXXXXXXXXXXXXXAN---RTVPEEFAYSPAARHLAQSKGIDIVSLAGSGRGGRVTKSDLIKALASGTEFPKLGAGRHAATEPAAAAAPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADHTDIPANNIRKVIAKRLAQSKATVPHLYVSAECELDALLALRKELAARHGAKVSVNDLVIRAAALALRDVPEANAQWSARDGAAALQRAVDVSVAVATPTGLITPIVTRAAERGLLNISAAVRDLAGRAKEGKLKPEEFQGGTFTISNLGMFGIAEFSAVINPPQACIMAVGGGVRRVVPGARDAATGARAPPRVATVMTAKLSADRRVVDEAVAAQFLQQF 543
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A7S2R7Y6_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7Y6_9STRA) HSP 1 Score: 411 bits (1057), Expect = 2.120e-132 Identity = 240/473 (50.74%), Postives = 309/473 (65.33%), Query Frame = 2
Query: 329 DFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAAXXXXXXXXXXXXXXXXXXXVVAPPVAPPSSS-----------------GDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGG--ARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
DF+VV+MPALSPTME G+++ W K PGD + AG+ + +VETDKA V F+ QDD VLA+++ AG E +VG P+A+ V D A+ AF ADAAG V L + G XXXX R V + FL PAA H+A+S+GIDA++L G+GKGGRITK D++ ALA G+ FPA A A AP AP +SS F D PA++++K+ A+RLT+SKA VPHLYV+M E D L+ FRK L+ E DV VSVND++IR+ ALALRDVPEANA + A++ +SID+SVAVATPTGLITPIVT D+RGLS+IS VRDLA RA++ +L PEE+QGG+FTVSNLGMFGI+EFSAVIN PQACI+A+GGG +V +PRV + +TV++S DRRV+DEA A+Q LQ+F+ Y+E P LLL+
Sbjct: 37 DFSVVHMPALSPTMERGSISSWAKQPGDSIEAGETLAEVETDKAVVGFEYQDDAVLAKVLDPAGGTEFTVGDPIAITVVDHAAFEAFQTADAAGLVSLPSAGNTPAAVSATXXXXSTASAPTGPVEG---------RQVTDEFLLMPAAAHLARSRGIDATALAGSGKGGRITKGDILNALASGMTFPALATGAVSRPALTAAAEAS------TAAPAAAPLASSTVPTGETLSMPATPVTDAPFEDAPASSMRKVIARRLTESKATVPHLYVAMESELDALLRFRKYLKDECDVSVSVNDLVIRAVALALRDVPEANASFDAAQSAKRFNDSIDVSVAVATPTGLITPIVTGVDRRGLSDISSAVRDLAGRAQEGKLMPEEYQGGTFTVSNLGMFGISEFSAVINPPQACIMAIGGGVKRVV-ADSMDSEPRVATSMTVKMSCDRRVIDEATASQYLQAFRSYVEEPTLLLL 493
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A7S2ALJ9_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALJ9_9STRA) HSP 1 Score: 402 bits (1034), Expect = 2.100e-128 Identity = 241/471 (51.17%), Postives = 312/471 (66.24%), Query Frame = 2
Query: 317 TSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKA-----------AXXXXXXXXXXXXXXXXXXXVVAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQ--SGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
+S V++ V MPALSPTMESGT+ EW K PG+E++AGDV+C VETDKAT+AF++QDD VLA+ + AG +++G+ VA+ V+D AY AF+ ADAAGE+ + A R+V + FL PAARHM++SKG+D L GTGKGGRITK D++ A+ +GV P A + A XXXXXXXXXXX++ P A +S + D PA+ ++K+ A RLTQSKAE PH YVS+ D +M RKTL KE DV VSVND+IIR A LALRDVPEANA W + + ++DISVAVATPTGL+TPIVT D +GL I+G VRDLATRARD +L PEE+QGGSFT+SNLGMFG++EFSA+INMPQACI+AVGGG ++ ++ + + + +T RLS D RVVD A+AAQ LQ+F+ YME P+L ++
Sbjct: 72 SSEVEYVTVVMPALSPTMESGTIAEWSKQPGEEIAAGDVLCQVETDKATMAFEMQDDAVLAKQLVPAGDESINIGTAVAITVDDMAAYEAFLAADAAGEISIDANDGPAAGGAVDEVETTTGTVSSEAAMIAST------RTVADEFLLTPAARHMSESKGLDVRGLAGTGKGGRITKGDVIHAINEGVTLPLLASSSAPSVAAVTSPAPSVSSTPAXXXXXXXXXXXMMDLPPAECTSGAGYSDSPASGMRKVIASRLTQSKAEAPHAYVSIEARLDPIMKLRKTL-KEGDVNVSVNDLIIRCAGLALRDVPEANASWDAKTQSVVTNPNVDISVAVATPTGLMTPIVTGVDGKGLGEINGAVRDLATRARDGKLMPEEYQGGSFTISNLGMFGVSEFSAIINMPQACIMAVGGGERRLVQKKDE-EGLSIETVMTARLSCDSRVVDSAVAAQFLQAFQGYMEQPKLTVL 534
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A7S4SV80_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SV80_9STRA) HSP 1 Score: 395 bits (1014), Expect = 7.020e-125 Identity = 231/483 (47.83%), Postives = 306/483 (63.35%), Query Frame = 2
Query: 302 TARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSG-EVSVGSPVAVIVEDGD---AYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFP-------AAAKAAXXXXXXXXXXXXXXXXXXXVVAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSG--GARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPG-------REAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
TA L+S T+ MPALSPTME+GT+++W+KS G+E SAGD++C++ETDKATV F+ QDDGVLA+I+ E + ++ +G P+ V+VE+ D A+ FV D AG ++ R V + F+ P+ARH++QS+G+DA+ L G+GKGGR+TK D++ ALA G E P A+A VVA + S+ G + D P NN++K+ AKRLT+SK +VPH Y SM E D +++ RK L +HDVKVSVND+IIRS+ALALRDVPE NA G ++ E+IDIS+AVATPTGLITPIV DQ+GLS+I+ VRDLA RAR+ +LKPEE+QGG+F +SNLGMFGI+EFSAVIN PQA ILAVGGG ++ P +E KP + + +T RLSADRRVVDEA AA L +FKHY+ P LL++
Sbjct: 106 TASVLSSYPPHTLFPMPALSPTMETGTISKWNKSEGEEFSAGDILCEIETDKATVDFEAQDDGVLAKILREGSNAVDLPIGVPICVVVEEADELAAFKDFVLDDGAGGAAAPTAAQEEAPAAASAPTPTAQA------------ESVVNRDVADEFVLMPSARHLSQSRGVDATVLVGSGKGGRVTKGDVLAALANGTEMPPLTSSVLASAPVDTPAAATQAAAAPAKAASSPVVAT-IPEISTQGSYEDVPNNNMRKVIAKRLTESKRDVPHFYTSMEVELDEVLSLRKMLVSKHDVKVSVNDLIIRSSALALRDVPEVNATIDSKTGNLRARENIDISIAVATPTGLITPIVPHTDQKGLSDITNSVRDLAGRAREGKLKPEEYQGGTFCISNLGMFGIDEFSAVINPPQAAILAVGGGTKRIVPAPYVDGVAKEDQPKPVIRTVMTARLSADRRVVDEATAALFLSAFKHYLSKPHLLML 575
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A7S2LCD3_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCD3_9STRA) HSP 1 Score: 387 bits (994), Expect = 3.320e-123 Identity = 237/468 (50.64%), Postives = 310/468 (66.24%), Query Frame = 2
Query: 308 RALTSGV-DFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPA-AAKAAXXXXXXXXXXXXXXXXXXXVVAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQ--SGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKP-----GREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELL 1684
RAL+S + VV +PALSPTMESG + +W G GDV+C+VETDKATV F+ QDDGVLA+I+ +GS ++ VG+PV ++VED D +F + +V A + P R + + ++ +PAARH++QSKG+DA+ L GTGKGGR+TK D++L L P +A XXXXXXXXXXXXXXX V P +G F D P NN++K+ AKRLT+SK +VPH Y S+ E D ++A RK L +H+VKVSVND+II+S+ALALRD+ NA ++ + + +DISVAVATPTGLITPIVT AD+RGLS+IS V+DLATRARD +LKPEE+QGG+FT+SNLGMFGI+EFSAVIN PQA ILAVGGG+P++ P G E + P+V + +T RLSADRRVVDEA AA +++F+ Y+ P LL
Sbjct: 23 RALSSSLPSHEVVGLPALSPTMESGNIADWKIEEGQAFGPGDVLCEVETDKATVDFEAQDDGVLAKILKPSGSQDIKVGAPVCIVVEDEDDVASFADYNVLDDVSSA-------------DDETPAVVASSDTVTEAVVTPSPSRDIEDQYILSPAARHLSQSKGLDATVLTGTGKGGRVTKGDVLLNLDSLPPLPVVSAVXXXXXXXXXXXXXXXXXAATPVYLSEAEVPEPAGSFEDVPNNNMRKVIAKRLTESKRDVPHFYTSVEIELDEVLALRKKLVNDHEVKVSVNDLIIKSSALALRDISAVNATYNDKKSEIVPSDDVDISVAVATPTGLITPIVTGADKRGLSSISSCVKDLATRARDGKLKPEEYQGGTFTISNLGMFGIDEFSAVINPPQAAILAVGGGSPRIIPTPYVEGAEEQEPPKVKTIMTARLSADRRVVDEATAAVFMKAFQEYLSKPHLL 477
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A812V1C5_SYMMI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1C5_SYMMI) HSP 1 Score: 387 bits (995), Expect = 3.340e-123 Identity = 223/469 (47.55%), Postives = 301/469 (64.18%), Query Frame = 2
Query: 326 VDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVK--ADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEA---FLFAPAARHMAQSKGIDASSLEGTGKGGR-ITKADLVLALAKGVEFPAAA---KAAXXXXXXXXXXXXXXXXXXXVVAPP-VAPPSSS--GDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKW--SGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
+ T + MP+LSPTM GT++ W+K+PG+ L AGD++CDVETDKA+V F+VQDDGVLA+I+ +AG EV G P+A++VED Y F+K ADA AA S+ P + P +PAARHM QS+ +D S++ G+ KGGR ITK D++ A+ G P A+ +A P V PSS+ G +VD P +N++K+ AKRL++SK VPHLY ++ CE D L+A RK L+K+ V VSVND++I+S A+ALRDVPE N KW + G +++DISVAVATP GLITPI+T ADQ GLS I+ KV+DLATRARD +LKP+E+QGG+FT+SNLG+FGI+ FSAVIN PQACILAVGGG +V ++PR+ + +TV+LS+DRRVVDEA A+Q LQ FK+Y+ P+L+++
Sbjct: 45 ISITKLPMPSLSPTMTHGTISSWNKAPGEALKAGDILCDVETDKASVGFEVQDDGVLAKILVDAGGAEVQCGQPIALMVEDDADYQTFLKLPADAYPVAVPAAAASPPAAP-----------------------SHTPSSAAPSFAGHVQLSPAARHMVQSRSLDVSAVHGSSKGGRVITKGDVIQAVKAGTARPGASTQTRATPATAVAAVASPPTPIPQTAATVPATVQDPSSNIGGLYVDVPNSNMRKVIAKRLSESKQTVPHLYTTIECEIDDLLAMRKALKKDFGVNVSVNDVVIKSVAMALRDVPECNGKWVPAEGRPAFNDAVDISVAVATPNGLITPILTSADQLGLSAINSKVKDLATRARDGKLKPQEYQGGTFTISNLGLFGISSFSAVINPPQACILAVGGGIERVVAPAPGKEQPRIVTTMTVQLSSDRRVVDEATASQFLQVFKYYLSNPKLVVL 490
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: W7TN15_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN15_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.750e-120 Identity = 248/463 (53.56%), Postives = 317/463 (68.47%), Query Frame = 2
Query: 329 DFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKADAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASS-LEGTGKGGRITKADLVLALAKGVEFPAAAKAAXXXXXXXXXXXXXXXXXXXVVAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSG--GARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVK-----PGREAGD-KPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
+ + + MPALSPTM GT++EW K PGD AGDV+C++ETDKA VAFDVQD+ VLA+I+ EA E+ VG PVA+ VED AY AFV+AD AG++ + XXXXXXXXXXXXXXXXXX ++L + F +PAARH+ S+ + S+ + GTGKGGR+TK D++ A+A G + AAA AA XX V P + + G F D +N++K+ A+RL +SKA VPH Y ++ CE D +++FRK +Q++ +V VSVND IIRSAALALRDVPEANA W G G E +DISVAVATP GLITPI++ +D+R LS IS ++DLA RAR +LKPEEFQGGSFT+SNLGMFGI+EFSAVIN PQA I+AVG GA +V+ P + AG+ KP + +T LS DRRV+DEA+AAQ LQ+FK YM PELLL+
Sbjct: 80 EVSTIVMPALSPTMTHGTISEWTKKPGDVCEAGDVLCEIETDKAVVAFDVQDECVLAKILEEAKGREIQVGMPVALSVEDKAAYEAFVEADKAGKIATPSTEALPSPTASSTXXXXXXXXXXXXXXXXXXTAHLGD------FALSPAARHLLHSRQLTLSAEVHGTGKGGRLTKGDVIQAIANG-QAQAAAFAAVPPXXPGLDPAQ-------VGIPTIQ--AGPGTFSDTKNSNMRKVIARRLAESKATVPHAYETVDCEIDAVLSFRKQMQRDFEVNVSVNDFIIRSAALALRDVPEANAFWDGPKGTAVLKEDVDISVAVATPAGLITPIISGSDRRRLSEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPPYLPDQHAGNLKPYTATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 526
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Match: A0A7S2XXU4_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXU4_9STRA) HSP 1 Score: 380 bits (975), Expect = 1.840e-120 Identity = 238/487 (48.87%), Postives = 291/487 (59.75%), Query Frame = 2
Query: 308 RALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYTAFVKA--DAAGEVDLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFAPAARHMAQSKGIDASSLEGTGKGGRITKADLVLALAKGVEFPAAAKAAXXXXXXXXXXXXXXXXXXX-------------------VVAPPVAPPSSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEADGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKP-----GREAGDKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1690
R T+G + MPALSPTMESGTV +W G E GD +C+VETDKATVAF+VQ+ V VG VA+ VED D + AF KA +A +DL+ S +FL PAAR MA+S G+DAS L GTG+GGR+TK D+V AL G++ P AK A XXXX V PP+ SS F D PANNIKK+TAKRLT+SKA VPH YVS E D + RK + KEH+VK SVND++IRSAALALRD E NAKW+G E++DIS+AVATP GLITPIVT+AD++GL++ISG VRDLATRARD +L PEEF GG+FT+SNLGMFGI+EFSAVIN+PQA I+AVG GA KV P G+E PRV + +T LS DRRV++EA A + + SFKHY+ PE+LL+
Sbjct: 4 RFSTTGFQVERIAMPALSPTMESGTVAKWLVQEGGEFGPGDALCEVETDKATVAFEVQEXXXXXXXXXXXXX-XVKVGEMVALAVEDADQFAAFQKAGPEALANIDLSG-------------GASASSAAVEDASPQAGSXXXXXXSASPSFLM-PAARFMAESMGLDASGLAGTGRGGRVTKGDVVEALEAGIKLPPLAKPAHTTSPAAAAAGEVPAXXXXXXXXXXXXXXXXTPASSSTVDLPPLQ--ESSSPFEDIPANNIKKVTAKRLTESKATVPHYYVSTEVEIDAALKLRKDMAKEHEVKFSVNDLVIRSAALALRDNAEVNAKWNGSEVVPEETVDISIAVATPNGLITPIVTNADKKGLTDISGNVRDLATRARDNKLAPEEFMGGTFTISNLGMFGISEFSAVINLPQAAIMAVGTGARKVVPSPRVEGQEEIPPPRVATMMTATLSCDRRVINEAAAGKFMNSFKHYLSQPEVLLL 473 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig893.20456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig893.20456.1 >prot_Ecto-sp13_S_contig893.20456.1 ID=prot_Ecto-sp13_S_contig893.20456.1|Name=mRNA_Ecto-sp13_S_contig893.20456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp MATSGARVLLRLRKTGAVPRLRRAEATWQYGRRSASGVTTTARQSSSSSHback to top mRNA from alignment at Ecto-sp13_S_contig893:6255..9324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig893.20456.1 ID=mRNA_Ecto-sp13_S_contig893.20456.1|Name=mRNA_Ecto-sp13_S_contig893.20456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3070bp|location=Sequence derived from alignment at Ecto-sp13_S_contig893:6255..9324- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig893:6255..9324- >mRNA_Ecto-sp13_S_contig893.20456.1 ID=mRNA_Ecto-sp13_S_contig893.20456.1|Name=mRNA_Ecto-sp13_S_contig893.20456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig893:6255..9324- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |