mRNA_Ecto-sp13_S_contig891.20437.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig891.20437.1
Unique NamemRNA_Ecto-sp13_S_contig891.20437.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE)

HSP 1 Score: 731 bits (1887), Expect = 8.540e-257
Identity = 432/512 (84.38%), Postives = 441/512 (86.13%), Query Frame = 1 
Query:  139 MSLSVDVDVNEGAHDVSPAAPLRPVFSDCFSPSPTXXXXXXXXXXXASIPSARAKMRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDGEPLIPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRIKSSCCSPPSSIPPSHPAKPSSSSVAAAALPSGVGAAGGVRNAAGDKGSRSKVVGDPLSALMGALGGEGGGGGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPATTDGSGTSS---------TGTASSDTDVFGXXXXXXXXXXXXXXXXTFGASSRCSPNRSRAXXXXXXXXXXXXXXXXXXXXXXXXMILPPSYLYPVPNNAAAAKVGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQQ 1647
            MSLSVDVDV+EGAHDV PAAPLRPVFSDCFSPSPT XXXXXXXXX ASI SARAK+RWGLWSPNDAEWMQLVQDNYNKHHRLAGPIR DGEPLIPL IHHIWLGSPLP AFARL ESWLA+HSG SSQG GHEMS  SSTPW+VRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCL SFDDLH+RYEFYAGVSNTGTFELNNGLIGCRPGHP+MRDIVNRIKSSCCS PSS PPSHP KPSSSSVAA  L SGVG AG V +A GD       VGDPLSALMGALG EGG GGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGED AAPAT DGSGTSS         TGTA+ D D FGXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXX        MILPPSYLYP+PNNAAAAK GLLIGDGTESGVRER GGYLSSESLAAHLWGRSWQQ
Sbjct:    1 MSLSVDVDVDEGAHDVGPAAPLRPVFSDCFSPSPTSXXXXXXXXXAASILSARAKIRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIREDGEPLIPLKIHHIWLGSPLPAAFARLCESWLARHSGPSSQGLGHEMSKSSSTPWEVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLSSFDDLHRRYEFYAGVSNTGTFELNNGLIGCRPGHPIMRDIVNRIKSSCCSLPSSTPPSHPGKPSSSSVAAGVLLSGVGVAGSVTDAGGDGXXXGTTVGDPLSALMGALGEEGGAGGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAARDADAFGXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXALAATRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRERAGGYLSSESLAAHLWGRSWQQ 506
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: D7FIJ5_ECTSI (Surface protein Sur1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ5_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.700e-110
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 1 
Query:  304 MRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDGEPLIPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 816
            MRWGLWSP DAEWMQLVQDNYNKHHRLAGP+R DGE LIPL IHHIWLGSPLPEAFARLRESWLA+HSG SSQGRG E SNG STPW+VRLWTDAD++AFGLENRGAYDAAQNFGQKSDILRYE+LLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG
Sbjct:    1 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 171
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: D7G7P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P2_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 7.750e-73
Identity = 206/279 (73.84%), Postives = 208/279 (74.55%), Query Frame = 1 
Query:  838 MRDIVNRIKSSCCSPPSSIPPSHPAKPSSSSVAAAALPSGVGAAGGVRNAAGDKGSRSKVVGDPLSALMGALGGEGGGGGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPATTDGSGT---------SSTGTASSDTDVFGXXXXXXXXXXXXXXXXTFGASSRCSPNRSRAXXXXXXXXXXXXXXXXXXXXXXXXMILPPSYLYPVPNNAAAAKVGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQQ 1647
            MRDIVNRIKSSC                           GV AA GV +AAGD G R   VGDPLSALMGALGGE     LL GLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAP TTDGSGT          STGTA+ DTDVFGXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXX  LPPSYLYPVPNNAAAAK GLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQQ
Sbjct:    1 MRDIVNRIKSSCXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRAAAGVTDAAGDGGGRGTTVGDPLSALMGALGGEXXXXXLLTGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPTTTDGSGTISTAQEEIFHSTGTAALDTDVFGXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPSYLYPVPNNAAAAKAGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQQ 276
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A836C8H1_9STRA (Surface protein Sur1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H1_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.810e-44
Identity = 82/184 (44.57%), Postives = 104/184 (56.52%), Query Frame = 1 
Query:  283 IPSARAKMRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDG------EPLIPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 816
            +PS R  ++W LWS  D  W+ L   +Y   H       GD       +P IP  +H +WLG  +P  F  LRESW   H G                 W++RLW   D+  FGLENR A+DAA N+G+KSDI RYEIL RHGG+YVDVDFLCL S   +    +F+AG++N G  E+NNGLIG
Sbjct:   14 LPSDRP-LKWALWSTEDRRWLHLASLHYE--HTWRQRCSGDATAAIGQQPCIPHTLHQVWLGGSMPSKFRDLRESWAKLHDG-----------------WELRLWGGGDVEDFGLENRAAFDAATNYGEKSDIFRYEILHRHGGIYVDVDFLCLQSLQVMADNLDFFAGLANVGAVEINNGLIG 177
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A6G0WYT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYT2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.680e-41
Identity = 80/189 (42.33%), Postives = 107/189 (56.61%), Query Frame = 1 
Query:  304 MRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDGEPLIPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKR--YEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRIK 864
            MR+ LW   D  W   + + +++   L       G P+IP  IH IWLG  L + F    +SW   H                   W+  LWT+ +I  + L+N+ AYD A NFG+KSDILRYEIL   GGLYVDVDF CL  FD LH+    EFYAG+SNT + E+NN LIGC P HP+++ +++ I+
Sbjct:    1 MRYKLWGAEDMAWHFHLSERFDEQRDLWEAPPSPGPPVIPKRIHQIWLGPALMDEFHSYIQSWKNHH-----------------PDWEYTLWTEREIENWKLQNQAAYDMATNFGEKSDILRYEILETFGGLYVDVDFECLKPFDQLHENPTCEFYAGLSNTRSVEINNALIGCVPNHPILKAVISAIQ 172
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: F0W3M3_9STRA (Surface protein Sur1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3M3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.650e-36
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 1 
Query:  307 RWGLWSPNDAEWMQLVQDNYNKH---HRLAGPIRGDGEPLIPLNIHHIWLGS-PLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRIKS 867
            +W  WSP+D +W Q +     +    +++   +  D    IP  IH IWLG  P+P    +  E+W   H                   W+ +LWTD  ++   L+N+  +D A N+G+KSDILRYEILL+ GG+YVDVDF CL  F DL + + F  G+SNT   ELNNGLI C   HP++R++V  + S
Sbjct:   41 KWNFWSPDDRDWNQALLSQSTERLCDNQMFPTV--DNAVRIPFIIHQIWLGPHPIPAFCLQQMETWRQIH-----------------PQWEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDLLQAFSFITGISNTDVVELNNGLIACTRNHPIVRELVASLAS 212
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A7S1CD16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD16_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.680e-36
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 1 
Query:  418 IPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRIK 864
            IP  +HH+WLG  LP  FARLR +W   H       RG          W+  LW DA++ A  L NR A+DAA N+G+KSDILRYE+L   GG+YVDVD   +     LH+  + Y G SNTGTFELNN ++GC   HP++R + +R++
Sbjct:   30 IPRIVHHVWLGGRLPRRFARLRATWTTTH----PPSRG----------WQHVLWGDAEVAALTLRNRAAFDAAGNYGEKSDILRYELLWAFGGVYVDVDMQAVRPLTPLHRVCDLYVGFSNTGTFELNNAVVGCARHHPLLRRLADRVR 164
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A812NYH8_SYMPI (RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812NYH8_SYMPI)

HSP 1 Score: 157 bits (398), Expect = 3.310e-36
Identity = 84/191 (43.98%), Postives = 107/191 (56.02%), Query Frame = 1 
Query:  304 MRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRG-DGEPLIPLNIHHIWLGS-PLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRG---AYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRI 861
            +RWGLWSPND +W++ +++ +       G   G D  P IP  IH IWLG    PE       SW ++H G                 W+ RLWTDAD+ A  L + G   AY+AA N  +KSDILR  I+LRHGGLYVDVDF CL     LH R  FY G+SN G  E+NNGL    PGHP++  + +R+
Sbjct:  524 IRWGLWSPNDRQWLEELKELWQDAVAQLGSAPGLDPRPAIPQCIHQIWLGGRSRPEPCEGFTASWRSRHPG-----------------WEYRLWTDADV-AEELTHPGLAQAYEAASNPAEKSDILRLAIILRHGGLYVDVDFECLQPLGALHSRASFYCGLSNVGAVEVNNGLFAATPGHPLVSYLCDRL 696
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BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A7S4W6Q7_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W6Q7_9DINO)

HSP 1 Score: 151 bits (381), Expect = 4.160e-36
Identity = 78/188 (41.49%), Postives = 102/188 (54.26%), Query Frame = 1 
Query:  307 RWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDGEPLIPLNIHHIWLGS-PLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADI-NAFGLEN-RGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRI 861
            RWG+WSP+D  W    Q  +    +LA        P IP  IH IWLG  P+P     + ESW A H                   W+  LWTD D  +A    N R A+  A+N  + SD++R  ++L+HGGLYVDVDF CL  FD+LH R+ F+AG+SN G FELNNGL   RP HP++  +  R+
Sbjct:  102 RWGVWSPSDRRWSDEAQRLW----QLASRAGAHDGPRIPRRIHQIWLGPRPIPRDCVEMMESWKAAH-----------------PSWEYTLWTDLDAESALATPNLREAFAGARNPAEMSDVVRLGLILQHGGLYVDVDFECLQPFDELHGRFSFFAGLSNVGVFELNNGLFAARPRHPLVDFLCGRV 268
[Close]
BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Match: A0A7S4N7T0_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N7T0_GUITH)

HSP 1 Score: 146 bits (369), Expect = 2.790e-35
Identity = 72/198 (36.36%), Postives = 102/198 (51.52%), Query Frame = 1 
Query:  301 KMRWGLWSPNDAE--WMQ---LVQDNYNKHHRLAGPIRGDG---------EPLIPLNIHHIWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIV 852
            KM+WG W  +D +  W     L ++N  K   +  P+ G+           P IP  IH IWLG  +PE F   R +W+  H                   W+  LWT+ D+    + N  AY  A N G KSD+LR E++ R GGLY+D+DF CL SFD LH   +FYAG+SN G  E++NG+   R  HP+++ ++
Sbjct:    5 KMQWGWWFEDDEDFCWKTMRGLYEENVRKRMSMQSPVGGESPGSPSKETASPRIPRIIHQIWLGGNIPEQFLAWRNTWIDLH-----------------PEWQHILWTEEDVEELAMLNPEAYKNAPNLGAKSDLLRLEVVWRFGGLYIDIDFECLKSFDVLHDHLDFYAGLSNVGAMEISNGIFAARKKHPILKKLL 185
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig891.20437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQP8_9PHAE8.540e-25784.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIJ5_ECTSI2.700e-11091.81Surface protein Sur1 n=1 Tax=Ectocarpus siliculosu... [more]
D7G7P2_ECTSI7.750e-7373.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8H1_9STRA3.810e-4444.57Surface protein Sur1 (Fragment) n=1 Tax=Tribonema ... [more]
A0A6G0WYT2_9STRA4.680e-4142.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
F0W3M3_9STRA1.650e-3638.74Surface protein Sur1 putative n=1 Tax=Albugo laiba... [more]
A0A7S1CD16_9STRA2.680e-3646.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A812NYH8_SYMPI3.310e-3643.98RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A7S4W6Q7_9DINO4.160e-3641.49Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
A0A7S4N7T0_GUITH2.790e-3536.36Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig891contigEcto-sp13_S_contig891:8066..12352 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score342.4
Seed ortholog evalue3.7e-91
Seed eggNOG ortholog2880.D7FIJ5
Model size2399
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Glycosyltransferase sugar-binding region containing DXD motif
EggNOG OGs2S4FC@2759,COG3774@1
Ec32 ortholog descriptionGlycosyltransferase, DXD sugar-binding motif
Ec32 orthologEc-00_000790.1
Cds size1575
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig891.20437.1prot_Ecto-sp13_S_contig891.20437.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig891 8204..11666 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464164.2004068-UTR-Ecto-sp13_S_contig891:8065..82031681464164.2004068-UTR-Ecto-sp13_S_contig891:8065..8203Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig891 8066..8203 +
1681464164.270896-UTR-Ecto-sp13_S_contig891:11666..123521681464164.270896-UTR-Ecto-sp13_S_contig891:11666..12352Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig891 11667..12352 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464164.2132456-CDS-Ecto-sp13_S_contig891:8203..84681681464164.2132456-CDS-Ecto-sp13_S_contig891:8203..8468Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig891 8204..8468 +
1681464164.2234225-CDS-Ecto-sp13_S_contig891:8683..89551681464164.2234225-CDS-Ecto-sp13_S_contig891:8683..8955Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig891 8684..8955 +
1681464164.2323763-CDS-Ecto-sp13_S_contig891:9686..98261681464164.2323763-CDS-Ecto-sp13_S_contig891:9686..9826Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig891 9687..9826 +
1681464164.2436934-CDS-Ecto-sp13_S_contig891:10259..105791681464164.2436934-CDS-Ecto-sp13_S_contig891:10259..10579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig891 10260..10579 +
1681464164.254698-CDS-Ecto-sp13_S_contig891:11088..116661681464164.254698-CDS-Ecto-sp13_S_contig891:11088..11666Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig891 11089..11666 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig891.20437.1

>prot_Ecto-sp13_S_contig891.20437.1 ID=prot_Ecto-sp13_S_contig891.20437.1|Name=mRNA_Ecto-sp13_S_contig891.20437.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=525bp
MSLSVDVDVNEGAHDVSPAAPLRPVFSDCFSPSPTSTSPSASGAAAASIP
SARAKMRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIRGDGEPLIPLNIHH
IWLGSPLPEAFARLRESWLAKHSGHSSQGRGHEMSNGSSTPWKVRLWTDA
DINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLGSFD
DLHKRYEFYAGVSNTGTFELNNGLIGCRPGHPVMRDIVNRIKSSCCSPPS
SIPPSHPAKPSSSSVAAAALPSGVGAAGGVRNAAGDKGSRSKVVGDPLSA
LMGALGGEGGGGGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVF
TRAVMAWMVSSATGEDGAAPATTDGSGTSSTGTASSDTDVFGGGGGGGGR
GGDGGGGATFGASSRCSPNRSRADDNTTATAAAAAAAAATPAATPPAMIL
PPSYLYPVPNNAAAAKVGLLIGDGTESGVRERVGGYLSSESLAAHLWGRS
WQQQQQQQQQQQQQQQQLVKKWWA*
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mRNA from alignment at Ecto-sp13_S_contig891:8066..12352+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig891.20437.1 ID=mRNA_Ecto-sp13_S_contig891.20437.1|Name=mRNA_Ecto-sp13_S_contig891.20437.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4287bp|location=Sequence derived from alignment at Ecto-sp13_S_contig891:8066..12352+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGGGTTATCTGCTGCTGTGGTGCCAGCGCTGGGTGCTGAAGCTTGAT
GCTGGTGCTTGTGCTGGTGCTAGTTAACCTGCCTCTTCAGCTTCGTCGAG
GGCTTTATCTCGAGCCCTGCTAAACACAGAGACAGGCAATGTCTCTCTCG
GTGGATGTGGATGTAAATGAGGGCGCTCATGATGTTAGTCCAGCGGCTCC
ACTTCGTCCTGTGTTCAGTGACTGTTTCTCTCCCTCTCCCACCTCCACTT
CTCCTTCTGCTAGTGGTGCTGCCGCTGCTTCGATTCCCTCGGCGAGGGCG
AAGATGCGATGGGGGCTATGGTCCCCGAATGACGCTGAGTGGATGCAACT
GGTGCAGGACAACTACAACAAGCATCACCGACTAGCAGGGCCGATCCGTG
GAGGTGAGAGCGGACGGTTCGTTCATGTTGGCATGCACTGACCATGGTAT
AGAGCAACAGCAGTCAAATACCACCACCACCACCAACGGACTTTTTTTTC
GGCGGGCCTCGTGGGCGATGATCGCGAAGCATACGCGCGCCTACACAGTA
GTGCACGTTTCTCGTACGTAATTCCTTCTCGCGTGTCGCTCGTTCGCTCT
CTCATGTACGGTGCGGAGATGGCGAGCCTCTGATTCCTCTCAACATTCAC
CATATCTGGCTGGGCAGCCCGCTCCCCGAAGCCTTCGCCCGCCTTCGCGA
GTCGTGGCTGGCGAAACATAGCGGGCACAGCAGTCAGGGGCGTGGGCATG
AGATGAGCAATGGTAGCAGCACACCGTGGAAGGTGCGGCTGTGGACGGAC
GCTGACATCAATGCTTTCGGCTTGGAGAACCGCGGAGCCTACGACGCTGC
CCAAAACTTCGGGCAAAAGTCGGACATCCTGCGCTACGAGGTCGGCCGTG
TGTGGGTGTGTGCACGTGTTTGAGTAGGTAGTCTATGCTTGCGTTTGATT
TTCCTACATGGTTCGGATGGCGTCGACACCGATGGATGTTGTCGCAATAG
AGATGCCAGTCGCACGAAAGATTCGATTACTCGATTAAATCCGCTGGCTG
CCGTGCGGGGTGTTTGTGTTGTAGTTTTGAATGCATCCACCGCGCTAACT
CGACGATCAATGGAATGACACCGACGCTAGTCAGACACCCCTCAGAAACG
ATTTCACGCGTGTGCTGATGTGTGGAGTTCTCATCGTACCCCCTCCTGTG
TGTCTGTCGTGTATTTCGGTGCCCGTTGGCCTGTGCGTGTAAGGTTCTCG
TGCTGGCTTTAGCTTCGTCGTGTGTGCTTCTCTCTGTCCCATTTAGACCT
ACAGCAGTATTCGCATCTGGTACTTTACGACGACTTCAACAAAAAAGGGA
AAGGGTTTCATTGGGTACCATATGTACGTATGCACTCACTGCGTTCCAAG
CGACGATTTTAACGGTCTTCCTTCCGAAGAGGCAGGCGGATATGCGTCCT
CAACTCGAACCGCCGCCCACCAAACAAACCTTCCCCCTTTGCCGCCATCC
CCTGTTTCGTGCTCTTGACTCTTCCTCTTATTCTCTCCGGACCCCTCTCC
GGTTCTCTCTCCCTTGAAAACACGCATCCCTCCCCCCCCCCCGCCCGGTT
TCAAACGTTTCTCAAGTGCAGATCCTGCTTCGGCATGGAGGTCTTTACGT
GGACGTGGACTTCCTCTGCCTTGGCTCATTCGACGACCTTCACAAGCGCT
ACGAGTTCTACGCAGGCGTTTCTAACACGGGCACGTTCGAGCTCAACAAC
GGCCTCATCGGGTGAGTTGGGCGGGGGGGGGGACCGCATAAGGGAGCTCG
AGGACGACGCGTGCGTACGCGTCGCGGTCATTTTAGCACTTTGCGGCGAT
TCTTGAGCCAAGTGACTTCCCTACACATCTGTCTTTGAGAGCGTGACAAG
CACCAACCAGAGGTTGGCCTTGCCCCCGGACCATATACTGTGTCGGAGCC
AGAGCTCCAGCCTGAAGAAGGCCATGAACTAAACAGATTTACAGGCCAGT
TGAAGAGCCCACCCCTGTTCGGCGAACAGCGAGCACAGCAACAAGCTTGG
AAAACATCAACATGGCCTAGATGCAGAGACTTGCTCTGCCGGTGGCACAT
ACACTTGACAGTCACTGAGCCCCCTGTTCCGTTCCCTTGTGCCTCCCATC
TGCTCCCCTCGCCGCCACCAATCGCGCGCACGCTTGCCATGCAGCTGCCG
CCCGGGCCACCCGGTCATGCGCGACATCGTAAACAGAATAAAGAGCAGCT
GTTGTAGCCCGCCTTCTTCCATTCCTCCTTCTCATCCTGCTAAACCCTCG
TCTTCATCGGTGGCGGCGGCGGCGCTACCCTCTGGCGTGGGAGCCGCCGG
CGGCGTCCGTAACGCCGCCGGCGATAAAGGTTCTAGGAGCAAAGTGGTGG
GGGATCCGCTATCGGCCCTGATGGGGGCGTTGGGAGGGGAGGGGGGAGGG
GGGGGGCTGTTGGCGGGGCTGCTGGGTGGGGATGATCGTGCCCGCTTGCG
ACAGGCTGTGGAAGGTGAGTGGATTCTTTATTTGTTCTCCTCCCCGGGCG
TGTGTTGTTTGCTTGATGAGTTGTGATGGTGCTGGATGCGGAAGTTGGGC
CTACTTTGGTATCGTTGTTGACGGCCCTGGGTTTCTCGTCCGTGCAGCAC
ATGCGTGGGATGGGTCTTGCAAAGGCATGGAGGGCGATGGTAATTCACAG
CTTGATTCGTTTCTGTTGCTTGTATCGGTTTGTGGTTTCCCGTGAATGAT
ACCAGCTCCAAGACCTGCCGGCTGCACTGTTGCGATGCAAGTTGATCTAG
TGCCAAGGTCTGAGACCGACCCAGGTGACAAAACGTCCCATGGTATCGAC
TGCCTCGGATTCGCGGTTTTTCAAAGTGTGGCCCTCTGTCCCTCGCCCTC
AAGGACAATGCTTGAATAAAAGGACAGCAAAAAATGGACGAAATACAGGC
AACAACAACAACCACCACCACCTCAACACCAACATCAACGATAATCCGTT
TCTCGCCCCGATCGGCTCGACAGTGGAGGCGGACAGCGCTACAGAAACCA
TCGTCAAGACAGGCCCTGGGGTGTTCACGAGAGCTGTCATGGCGTGGATG
GTCAGCTCCGCCACGGGGGAAGACGGTGCTGCTCCCGCTACAACCGACGG
CAGTGGCACGAGCAGCACTGGCACGGCTTCGAGCGACACCGACGTTTTTG
GTGGTGGTGGTGGTGGTGGTGGTCGGGGTGGTGATGGTGGTGGTGGTGCT
ACCTTCGGTGCATCGTCACGTTGCAGTCCAAACCGAAGTCGTGCCGACGA
CAACACCACGGCCACAGCCGCCGCCGCCGCCGCCGCCGCCGCTACTCCCG
CCGCTACGCCGCCTGCGATGATCCTGCCCCCGTCGTATCTGTATCCGGTC
CCCAACAACGCCGCCGCCGCCAAGGTGGGCCTCTTGATCGGGGACGGGAC
CGAAAGTGGGGTCCGCGAGCGCGTGGGCGGTTATCTCTCCTCGGAGTCTC
TTGCGGCTCACCTCTGGGGAAGGTCTTGGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAACAACAACAACAACAACTGGTCAAGAAGTGGTGGGCATG
ACGTGGCGACGTGTATGACAAAGGACGCGGTTGTCTTGTTTGATTTATTT
TTTCGGTTTCGTCCGCGTAGTATCACAAATTCCCGTGTAGCGCAAGTTGT
GGTGCACCGTACTTTTTCCCGCTGAGAGTTTTGTGTAGGAAAGGGAGGGT
CTTTGCTGCAGGGCGAACGTAGGCGTGATGAGGGGCATGGGAAACGAGGG
ATGGTACTGTGGTCGAGCTGTTGCTTGTCTCGGGGGGGCGTGGGTTGAAG
GCCTTACGGGTGGACAGCGTATGTATAGGGGGCGAGAGCTGAGGGTTTGC
TTCTGTTCTTGGTGGCCGACTGTCACTACTACTTCGCAAGCGGGAGCCAC
CGAGTTGCGGGTTGCTCTGCCATTGAGGGATGTCTCAGACAGCCTAGCAA
CGCGTGGCCGACTTGGCATAACTTCTCTATTTGCGGCTCGAGTATGGTCT
TTGCAAAATATCCGCTCATGTGTTTGTATTGCATTGGAACGGCAATTCCG
TTGGGGAAAATTCAGCTGTTGTTTCATGGGCTAACAGCTGCCGTGCAGCG
AAAACGGGGAACAGATGCGCGCTGGTGCAGCTTTTGGGGTTTTATTTGCC
ATCGGTTTACCATGATACGACGACTTTTTGCCAGAACTTCTCCTGTTACC
ATGTGCGAGCAGCGACGGCATGGTGAGTCGGATGCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig891:8066..12352+

>mRNA_Ecto-sp13_S_contig891.20437.1 ID=mRNA_Ecto-sp13_S_contig891.20437.1|Name=mRNA_Ecto-sp13_S_contig891.20437.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1575bp|location=Sequence derived from alignment at Ecto-sp13_S_contig891:8066..12352+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTCTCTCGGTGGATGTGGATGTAAATGAGGGCGCTCATGATGTTAG
TCCAGCGGCTCCACTTCGTCCTGTGTTCAGTGACTGTTTCTCTCCCTCTC
CCACCTCCACTTCTCCTTCTGCTAGTGGTGCTGCCGCTGCTTCGATTCCC
TCGGCGAGGGCGAAGATGCGATGGGGGCTATGGTCCCCGAATGACGCTGA
GTGGATGCAACTGGTGCAGGACAACTACAACAAGCATCACCGACTAGCAG
GGCCGATCCGTGGAGATGGCGAGCCTCTGATTCCTCTCAACATTCACCAT
ATCTGGCTGGGCAGCCCGCTCCCCGAAGCCTTCGCCCGCCTTCGCGAGTC
GTGGCTGGCGAAACATAGCGGGCACAGCAGTCAGGGGCGTGGGCATGAGA
TGAGCAATGGTAGCAGCACACCGTGGAAGGTGCGGCTGTGGACGGACGCT
GACATCAATGCTTTCGGCTTGGAGAACCGCGGAGCCTACGACGCTGCCCA
AAACTTCGGGCAAAAGTCGGACATCCTGCGCTACGAGATCCTGCTTCGGC
ATGGAGGTCTTTACGTGGACGTGGACTTCCTCTGCCTTGGCTCATTCGAC
GACCTTCACAAGCGCTACGAGTTCTACGCAGGCGTTTCTAACACGGGCAC
GTTCGAGCTCAACAACGGCCTCATCGGCTGCCGCCCGGGCCACCCGGTCA
TGCGCGACATCGTAAACAGAATAAAGAGCAGCTGTTGTAGCCCGCCTTCT
TCCATTCCTCCTTCTCATCCTGCTAAACCCTCGTCTTCATCGGTGGCGGC
GGCGGCGCTACCCTCTGGCGTGGGAGCCGCCGGCGGCGTCCGTAACGCCG
CCGGCGATAAAGGTTCTAGGAGCAAAGTGGTGGGGGATCCGCTATCGGCC
CTGATGGGGGCGTTGGGAGGGGAGGGGGGAGGGGGGGGGCTGTTGGCGGG
GCTGCTGGGTGGGGATGATCGTGCCCGCTTGCGACAGGCTGTGGAAGTGG
AGGCGGACAGCGCTACAGAAACCATCGTCAAGACAGGCCCTGGGGTGTTC
ACGAGAGCTGTCATGGCGTGGATGGTCAGCTCCGCCACGGGGGAAGACGG
TGCTGCTCCCGCTACAACCGACGGCAGTGGCACGAGCAGCACTGGCACGG
CTTCGAGCGACACCGACGTTTTTGGTGGTGGTGGTGGTGGTGGTGGTCGG
GGTGGTGATGGTGGTGGTGGTGCTACCTTCGGTGCATCGTCACGTTGCAG
TCCAAACCGAAGTCGTGCCGACGACAACACCACGGCCACAGCCGCCGCCG
CCGCCGCCGCCGCCGCTACTCCCGCCGCTACGCCGCCTGCGATGATCCTG
CCCCCGTCGTATCTGTATCCGGTCCCCAACAACGCCGCCGCCGCCAAGGT
GGGCCTCTTGATCGGGGACGGGACCGAAAGTGGGGTCCGCGAGCGCGTGG
GCGGTTATCTCTCCTCGGAGTCTCTTGCGGCTCACCTCTGGGGAAGGTCT
TGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACA
ACTGGTCAAGAAGTGGTGGGCATGA
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