mRNA_Ecto-sp13_S_contig890.20405.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig890.20405.1
Unique NamemRNA_Ecto-sp13_S_contig890.20405.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: Q8QNG0_ESV1K (EsV-1-119 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG0_ESV1K)

HSP 1 Score: 764 bits (1972), Expect = 2.960e-277
Identity = 380/432 (87.96%), Postives = 398/432 (92.13%), Query Frame = 1
Query:    1 MCCHIHMSSQLSSDTMTKASNGKGKGKAMTTPLKTRDESVDEIWKPTHLTHLYEVSNLGRVRRADNQFVRKLSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVCGYTFDYDESDNPVCEVRSVSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAHDKAVVQRGGGEPPTKRFESLSKASSYTGESILSILMSCRNTEDESWKYVE 1296
            MCC +H+  QLSSDTMTK SNGKGKGKAMTTPLKTRD SV E WKPTH+THLYEVSNLGRVRRADNQFVRKL+TNPHGYNLLTLNICGKPFTNLVGRLVLGAF+RAPIDGDKAHH+DG+STND IENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKER++FVSALEAASL DTRR DIYDAI  GR ISDGVCGYTFDYD+SD PVCE RSV GSDVY VSRDGRVRMENGRWTFGSRHW+TTGDSKKDK AYRRVDM +TTGGT KTKKKYVHVVVAEAFLGECP GYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGR PPGEKPVLLIKQDGTFS FKSSSEGARQMGV+VAT+SINCSTGRKNRAGNYWAHDK VV+ GG E     FESLSKAS  TGESI+SILMSCRNT+DESW +VE
Sbjct:    1 MCCRVHVLLQLSSDTMTKDSNGKGKGKAMTTPLKTRDASVKETWKPTHVTHLYEVSNLGRVRRADNQFVRKLTTNPHGYNLLTLNICGKPFTNLVGRLVLGAFDRAPIDGDKAHHIDGNSTNDMIENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKERMVFVSALEAASLFDTRRADIYDAIKYGRSISDGVCGYTFDYDDSDKPVCEERSVPGSDVYMVSRDGRVRMENGRWTFGSRHWQTTGDSKKDKQAYRRVDMTLTTGGTSKTKKKYVHVVVAEAFLGECPAGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRKPPGEKPVLLIKQDGTFSRFKSSSEGARQMGVNVATVSINCSTGRKNRAGNYWAHDKPVVKYGGDE-----FESLSKASGDTGESIMSILMSCRNTDDESWTFVE 427          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: D8LPE7_ECTSI (EsV-1-119 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE7_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 2.580e-92
Identity = 151/236 (63.98%), Postives = 174/236 (73.73%), Query Frame = 1
Query:  589 GYTFDYDESDNPVCEVRSVSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAHDKAVVQRGGGEPPTKRFESLSKASSYTGESILSILMSCRNTEDESWKYVE 1296
            GY F Y +SD+P  EV+ + GS  + VS DGRV+M  GRWT G RH      S+K    YRRVDM +   G     + YVHV+VAEAF+GE P GYQVDHIDG + NN VSNL Y+S  +N++  +A+G R PPGEKPVLLIK DGTF  FKSSSEGARQMGV+VAT+SINCSTGRKNRAGNYWAHDK VV+ GG E     FESL KAS  TGESILSILMSCRNT+DESW +VE
Sbjct:    9 GYMFGYGKSDDPTGEVKKIRGSTSHLVSSDGRVKMSEGRWTQGYRH---IVKSQKGDRCYRRVDMTLVVDGKSIKNRAYVHVLVAEAFIGERPNGYQVDHIDGFEGNNDVSNLRYLSPSDNNKMAFASGQRLPPGEKPVLLIKLDGTFLRFKSSSEGARQMGVNVATVSINCSTGRKNRAGNYWAHDKPVVKLGGDE-----FESLPKASGDTGESILSILMSCRNTDDESWTFVE 236          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A481Z7C4_9VIRU (HNH endonuclease n=1 Tax=Pithovirus LCPAC304 TaxID=2506594 RepID=A0A481Z7C4_9VIRU)

HSP 1 Score: 89.4 bits (220), Expect = 4.630e-16
Identity = 97/349 (27.79%), Postives = 149/349 (42.69%), Query Frame = 1
Query:  124 EIWKPTHLTH-LYEVSNLGRVRRADNQFVRKLSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVCGYTFDYDES----DNPVCEVRSVSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLG-ECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGE--KPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAH 1146
            EIWK        Y VSNLGRV+  +  ++   S    GY    +N  GK     +  LV  AF   P +     H++ +  ++ +ENL W +  E    R   +  A K +   S D      ++S  +A+  +  RR +I D   + R   +   G+ + Y E+     N   +  ++  S   KVS  GR+   +   T+GS   +T G      + Y RV   V +          VH ++ + F   E    Y VDHIDGNK NN V NLE+V+  EN +R  A G   P  +  K + L  +    + F S  E   + GV+  +I + C      R   +W +
Sbjct:    4 EIWKDLAPEFPYYFVSNLGRVKMYEG-YISHASPESSGYVRPGINKDGKKVKRSMHVLVAKAFIPNPENKSFVCHINRNKADNRVENLIWCTRQEKERGRIKSKKSAGKSINQLSIDGIYIKTWISISDASQTLLIRRQNISDTCKNKR---ESAGGFKWKYHETVHSLPNEEWKTMNLDPSASVKVSSFGRIWRCHDMKTYGS---ETNG------YMYVRVQGRVFS----------VHRLICQVFKPIENSDKYAVDHIDGNKRNNHVDNLEWVTDAENSKRARAAGLITPNNKCRKILQLDNEKRILNCFDSIKEATNKTGVNKGSICLACRNRTIKRGEFFWQY 329          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A0F9FC16_9ZZZZ (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A0F9FC16_9ZZZZ)

HSP 1 Score: 84.3 bits (207), Expect = 4.480e-14
Identity = 85/343 (24.78%), Postives = 147/343 (42.86%), Query Frame = 1
Query:  157 YEVSNLGRV-RRADNQFVRKLSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYP---RSIASKPVVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVCG---YTFDYDESDNPVC----EVRSVSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGEC-PTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDGTF-SWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAH 1146
            Y++ N GR+  +  N+F+     N  GY  ++L       T  V RLV   F    ++    +H+DGD  N+   NLEWT+  E      Y     S   K  V    D  E + +  ++  AS       D+       ++ S        Y F Y E  +       + R + G D Y +++DG++  E   W     H +   D     + Y        T   +K K+  +H +VA+ F+G+   +  Q++HID N++NN ++NLEYV+  +N    + NG RN    + +  +  DG   + + S ++ AR+  ++ +++        K   G  W +
Sbjct:   12 YQIYNDGRIYSKYSNKFLSYTMYN--GYYGVSLKSTKIKKTIRVHRLVALYFVPNNLNKKTVNHIDGDKLNNDYTNLEWTTQIENNVHMQYMYFGSSSRQKRAVCQYNDDNELITYFPSMAEASRQTGISKDMISHCCRNKVNSTNDKNGNKYIFKYKEESSQKIPRPQDARQIEGFDNYYITQDGKIYSE---WYQQYLHTQINSDG----YEY-------VTLKNKKKKRFQIHSLVAKYFIGDIGESNDQINHIDHNRANNNINNLEYVTASQNGHHKFING-RNAQMTRKIWQLDLDGNILNTYDSIADAARKNNLTYSSLGGAVQGRLKTLKGYRWQY 337          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A3G4ZTH2_9VIRU (HNH endonuclease n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZTH2_9VIRU)

HSP 1 Score: 84.7 bits (208), Expect = 5.330e-14
Identity = 91/348 (26.15%), Postives = 150/348 (43.10%), Query Frame = 1
Query:  118 VDEIWKPTHLTHLYEVSNLGRVRRADNQFVRKLSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIAS-KPVVATSEDRKERL-LFVSALEAASLVDTRRVDIYD-AIGSGRLISDGVCGYTF--DYDESD--NPVCEVRSVSGSDVYKVSRDGRVRMENGRWTFGSRH-----WKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNR 1125
            + EIWK       YE SNLG ++      + KL     GY  +TL       +  V R++   +   P +     H++   +++ +ENL W +  E    ++ P  I S + V   +   KE++ LF S  +AA  +     DI   AI  G    +G   Y +   YD+++  N   E+        YKVS  GR+         G R+     W  +             +  +  G  +K+K+  VH++VA AFL + P    V+H DGNKSNN + NLE+V+  EN+      G R     K      ++     + S+++  + + V  +TI   C+   K++
Sbjct:    1 MTEIWKSVVEFPDYECSNLGHIKNIKTNKLLKLIPRNTGYVYVTLKNEKSVKSFFVHRIIALTWIENPENKSTVDHINRIRSDNRVENLRWATNIEQAKNQTKPLLINSARGVWKCNSITKEKIKLFRSNTDAAKNIFQNITDIKKVAINIGEAARNGTRAYEYYWKYDDAEIENKDDEIWKNIEETSYKVSNYGRI--------IGKRNNILKCWLCS-------------EGYICFGLGKKSKR--VHIMVANAFLEKKPNATIVNHKDGNKSNNHIDNLEWVTVLENNVHAIETGLRKSI-RKIAQYDSENKLIKIYNSATDAGKALNVDHSTILNVCNNKHKSK 324          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: UPI0011CA62E9 (NUMOD4 domain-containing protein n=2 Tax=Bacillus amyloliquefaciens TaxID=1390 RepID=UPI0011CA62E9)

HSP 1 Score: 79.7 bits (195), Expect = 9.300e-14
Identity = 67/191 (35.08%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  643 VSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSKK--DKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGE---------KPVLLIKQDG-TFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAHDKAVVQRGGGE 1179
            V   D Y+VS  G VR               TG   K  DKH Y +V  ++   G RK     VH +VA AFL +      V+H DGNK NN VSNLE+V+ REN    +  G  +P            KPV  I  DG   S ++S +E ++  GV   TIS  C   RK+R+ N++    + +  G GE
Sbjct:   12 VECGDAYEVSNQGNVRNH------------LTGKQLKLRDKHGYSQV--VLWLNGNRKDVS--VHRLVALAFLKKDTKRNYVNHKDGNKKNNKVSNLEWVTPRENKIHAWRTGLIDPQRHRELMKKLHSKPVSQISSDGHVISTYESGAEASKVTGVRRDTISKQCILRRKSRSKNFYFRFASDMSEGVGE 186          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: UPI001C0F6E05 (NUMOD4 domain-containing protein n=1 Tax=Caldibacillus hisashii TaxID=996558 RepID=UPI001C0F6E05)

HSP 1 Score: 77.8 bits (190), Expect = 4.500e-13
Identity = 63/181 (34.81%), Postives = 95/181 (52.49%), Query Frame = 1
Query:  661 YKVSRDGRVRME-------NGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKK--YVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPP----GEKPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAH-DKAVV 1161
            Y+VS  GRVR +       NGR  F     KT    K+DK  Y +V +      ++ +KKK  +VH +VAEAF+        V+HIDG+K NN V NLE+ ++ +ND+  +  G R P      ++ + +  +DG+   ++S S  AR +GVSV +IS+  +   K   G +W   DK V 
Sbjct:   14 YEVSNLGRVRSKDRYTPTWNGR-VFKKGVLKTL---KEDKDGYFKVWL------SKNSKKKPFFVHRLVAEAFIDNPDNLPVVNHIDGDKKNNRVENLEWCTRSQNDKHAFKLGIRKPTDGGTSKRVLRMSPKDGSVKIYESISAAARDLGVSVQSISMCANGHTKTANGFHWVLIDKGVT 184          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A650DAT2_9VIRU (Hnh endonuclease n=2 Tax=Moumouvirus TaxID=985782 RepID=A0A650DAT2_9VIRU)

HSP 1 Score: 80.5 bits (197), Expect = 5.280e-13
Identity = 101/379 (26.65%), Postives = 163/379 (43.01%), Query Frame = 1
Query:  115 SVDEIWKPTHLTHLYEVSNLGRVRRADNQF-VRKLSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVC---------GYTFDYDESDNPVCEVRSVS----------------GSDV--YKVSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFL--GECPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDG--TFSWFKSSSEGAR--QMGVSVATISINCSTGRKNRAGNYWAHD 1149
            S +  WK       Y++S  G +  A   + ++K  T+  GY+++ L+   K     V RLV   +   P +     H+D +  N+ + NL W S+ +   T SY ++ A K ++    D K  L+     E AS+ +     I DAI S +  S G C         GY +      NPV +  ++                 G D+  YK+S  G V+ + G       H             Y+ + +  +T  TR T +  VH +VA  F+   +      ++HID N+SNN V NLE+V+++EN+   +A+G       KPV  I  +    F  FK+  E  +  ++     TIS+ C    + R G  WA+D
Sbjct:    2 SKNAKWKTIKEFPKYKISENGNIINASTNYPIKKTLTS--GYHMVILSGETKEKRVSVHRLVAKTYLPNPKNLRIVDHIDNNKLNNHVHNLRWVSVRD--NTLSYYKNFAPKNLI-LQLDTKGNLI----KEWASVRE-----ITDAIPSYKKNSLGHCITGKGKTAYGYVWC---RKNPVIKKEAIKIVIQKDEIFKKIPVIDGKDLSKYKISNKGNVKNDKGLLMRQKHH-----------DGYKSIGLTNSTTNTRDTYR--VHRLVAITFIKNDDPENKIHINHIDKNRSNNCVENLEWVTQKENN--CHASG-------KPVKAINPETGKVFKRFKTMREANQYFELNKKNTTISLACKNPDRIRFGYKWAYD 341          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A3G5AGA6_9VIRU (His-Me finger endonuclease n=1 Tax=Solumvirus sp. TaxID=2487773 RepID=A0A3G5AGA6_9VIRU)

HSP 1 Score: 80.9 bits (198), Expect = 5.890e-13
Identity = 87/341 (25.51%), Postives = 153/341 (44.87%), Query Frame = 1
Query:  157 YEVSNLGRVRRADNQFVRK--LSTNPHGYNLLTLNICGKPFTNLVGRLVLGAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIASKPVVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVCGYTFDYDESDNPVCEVRSVSGSDVYK-VSRDGRVRMENGRWTFGSRHWKTTGDSKKDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGE-CPTGYQVDHIDGNKSNNAVSNLEYVSKRENDRRTYANGGR----NPPGEKPVLLIKQDGTFSWFKSSSEGARQMGVSVAT-----ISINCSTGRKNRAGNYW 1140
            YE+S+ G V+   N +  K  L      YN+ T +  GK       RLV   F   P +    +H +   +++ +ENLEW ++ E    +   ++   +PV+   E       +    +A   +  R  ++ +AI  G+++ DG C + +  DE +  + + + +S S+    +S  GRV+   G+   G             ++ Y  V +++     +K  KK++H +VAEAFLG+    G  V+HID NK NN + NLE ++ ++N    Y NG      N    +PV+     G F       +  ++  + V+T     I+  C+  R +  G  W
Sbjct:   69 YEISDTGIVKNITNGYFPKGLLHDGYISYNIRTKDKKGK--IERAHRLVAMTFIPNPENKRTVNHKNKLRSDNRVENLEWATMKEQNNHKGPIKTTLGRPVLQLDEKGVIVKRWNKIKDAGEFLGLRVNEMSNAI-RGKVVIDG-CNWVY-ADEYEGGIKDEKWMSISNTKALISSMGRVKSAKGKTHSGYL-----------RNHYLMVGILID----KKVIKKHIHTLVAEAFLGKRSGDGMVVNHIDCNKLNNKLENLEVITYKQNTIHAYQNGRMKNIDNARKARPVIQYDLQGNFI---EEFQTVKKANIKVSTACKQYIADACNNLRPSAGGFIW 386          
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Match: A0A843H1I3_9EURY (HNH endonuclease n=1 Tax=Methanobrevibacter sp. TaxID=66852 RepID=A0A843H1I3_9EURY)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-12
Identity = 45/131 (34.35%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  787 VTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGNKSNNAVSNLEYVSKREN----------DRRTYANGGRNPPGEKPVLLIKQDGTFSWFKSSSEGARQMGVSVATISINCSTGRKNRAGNYWAHD 1149
            +T     K+ K+ VH +VA+AF+       QV+HIDGNK+NN VSNLE+ +  EN              +   G+N P  KPV+ +K +   + F   +E  R  G+S ++IS  C    K   G  W +D
Sbjct:   49 LTVSFGHKSTKRLVHRLVAKAFIPNPDNKAQVNHIDGNKTNNNVSNLEWCTCSENLIHKHRVLGHKGAWFGKFGKNNPSSKPVIQLKNNKIINKFDCIAEAERMTGISHSSISACCKNKSKTAGGYEWEYD 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNG0_ESV1K2.960e-27787.96EsV-1-119 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPE7_ECTSI2.580e-9263.98EsV-1-119 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A481Z7C4_9VIRU4.630e-1627.79HNH endonuclease n=1 Tax=Pithovirus LCPAC304 TaxID... [more]
A0A0F9FC16_9ZZZZ4.480e-1424.78Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A3G4ZTH2_9VIRU5.330e-1426.15HNH endonuclease n=1 Tax=Terrestrivirus sp. TaxID=... [more]
UPI0011CA62E99.300e-1435.08NUMOD4 domain-containing protein n=2 Tax=Bacillus ... [more]
UPI001C0F6E054.500e-1334.81NUMOD4 domain-containing protein n=1 Tax=Caldibaci... [more]
A0A650DAT2_9VIRU5.280e-1326.65Hnh endonuclease n=2 Tax=Moumouvirus TaxID=985782 ... [more]
A0A3G5AGA6_9VIRU5.890e-1325.51His-Me finger endonuclease n=1 Tax=Solumvirus sp. ... [more]
A0A843H1I3_9EURY1.030e-1234.35HNH endonuclease n=1 Tax=Methanobrevibacter sp. Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:3369..4667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViruses
Stop1
Start1
Seed ortholog score769.6
Seed ortholog evalue7.7e-220
Seed eggNOG ortholog654926.Q8QNG0_ESV1K
Model size1299
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.HNH endonuclease
EggNOG OGs4QAIU@10239,4QUQC@35237
Cds size1299
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464162.5529387-CDS-Ecto-sp13_S_contig890:3368..46671681464162.5529387-CDS-Ecto-sp13_S_contig890:3368..4667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig890 3369..4667 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20405.1prot_Ecto-sp13_S_contig890.20405.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig890 3369..4667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig890.20405.1

>prot_Ecto-sp13_S_contig890.20405.1 ID=prot_Ecto-sp13_S_contig890.20405.1|Name=mRNA_Ecto-sp13_S_contig890.20405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=433bp
MCCHIHMSSQLSSDTMTKASNGKGKGKAMTTPLKTRDESVDEIWKPTHLT
HLYEVSNLGRVRRADNQFVRKLSTNPHGYNLLTLNICGKPFTNLVGRLVL
GAFERAPIDGDKAHHVDGDSTNDTIENLEWTSIGEAGTTRSYPRSIASKP
VVATSEDRKERLLFVSALEAASLVDTRRVDIYDAIGSGRLISDGVCGYTF
DYDESDNPVCEVRSVSGSDVYKVSRDGRVRMENGRWTFGSRHWKTTGDSK
KDKHAYRRVDMIVTTGGTRKTKKKYVHVVVAEAFLGECPTGYQVDHIDGN
KSNNAVSNLEYVSKRENDRRTYANGGRNPPGEKPVLLIKQDGTFSWFKSS
SEGARQMGVSVATISINCSTGRKNRAGNYWAHDKAVVQRGGGEPPTKRFE
SLSKASSYTGESILSILMSCRNTEDESWKYVE*
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mRNA from alignment at Ecto-sp13_S_contig890:3369..4667-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig890.20405.1 ID=mRNA_Ecto-sp13_S_contig890.20405.1|Name=mRNA_Ecto-sp13_S_contig890.20405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1299bp|location=Sequence derived from alignment at Ecto-sp13_S_contig890:3369..4667- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGTTGTCACATACATATGTCGTCACAACTTTCATCGGATACCATGAC AAAAGCGTCGAACGGAAAGGGCAAGGGCAAGGCCATGACCACTCCATTGA AGACGCGCGATGAATCGGTGGACGAGATATGGAAACCAACACACTTGACT CATCTTTACGAGGTTTCGAATCTGGGCCGTGTGAGGAGAGCGGATAATCA ATTTGTACGGAAGTTGTCCACAAACCCTCATGGATACAATCTCTTGACTC TCAACATTTGCGGAAAGCCCTTCACCAACCTCGTCGGGAGACTTGTGCTC GGAGCTTTCGAGAGAGCACCAATCGATGGAGACAAAGCGCATCATGTCGA TGGTGATAGTACCAACGACACGATCGAAAACCTGGAGTGGACGTCCATCG GCGAGGCTGGCACCACTCGATCGTATCCACGGTCGATTGCAAGCAAGCCG GTTGTCGCCACCAGTGAAGATCGTAAAGAGAGATTGTTGTTTGTGTCGGC GCTTGAGGCTGCTTCTCTCGTCGACACTCGTCGCGTCGACATATACGACG CCATCGGAAGTGGACGACTGATATCGGATGGCGTCTGCGGATACACTTTC GACTACGATGAATCCGACAACCCCGTGTGCGAAGTACGGAGTGTGTCTGG GTCGGATGTATACAAGGTATCCCGTGACGGGAGAGTACGCATGGAAAACG GTCGATGGACGTTTGGTTCAAGACACTGGAAAACCACGGGGGACTCCAAG AAAGATAAACATGCGTACAGAAGAGTCGATATGATTGTAACCACAGGGGG TACGAGAAAGACAAAGAAAAAGTACGTCCACGTTGTGGTTGCCGAGGCGT TCCTTGGGGAATGTCCAACGGGGTACCAGGTAGACCACATCGACGGAAAC AAGTCGAACAACGCCGTGTCCAACTTGGAGTACGTGAGCAAGAGAGAAAA CGACCGGCGCACTTACGCCAACGGTGGGAGGAACCCTCCGGGAGAGAAAC CAGTGCTGCTGATCAAACAAGATGGAACATTCTCATGGTTCAAGTCGTCG TCAGAGGGTGCTCGGCAGATGGGAGTCAGCGTAGCCACCATCTCGATCAA CTGCTCCACGGGCAGGAAGAACAGGGCGGGAAACTACTGGGCACACGACA AGGCTGTTGTGCAACGTGGCGGGGGCGAACCGCCGACAAAGCGTTTTGAA TCGCTGTCAAAAGCTTCTAGCTACACGGGAGAGAGCATTCTTAGCATTCT CATGTCGTGTCGAAACACAGAGGACGAGTCCTGGAAGTATGTTGAATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig890:3369..4667-

>mRNA_Ecto-sp13_S_contig890.20405.1 ID=mRNA_Ecto-sp13_S_contig890.20405.1|Name=mRNA_Ecto-sp13_S_contig890.20405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1299bp|location=Sequence derived from alignment at Ecto-sp13_S_contig890:3369..4667- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGTTGTCACATACATATGTCGTCACAACTTTCATCGGATACCATGAC
AAAAGCGTCGAACGGAAAGGGCAAGGGCAAGGCCATGACCACTCCATTGA
AGACGCGCGATGAATCGGTGGACGAGATATGGAAACCAACACACTTGACT
CATCTTTACGAGGTTTCGAATCTGGGCCGTGTGAGGAGAGCGGATAATCA
ATTTGTACGGAAGTTGTCCACAAACCCTCATGGATACAATCTCTTGACTC
TCAACATTTGCGGAAAGCCCTTCACCAACCTCGTCGGGAGACTTGTGCTC
GGAGCTTTCGAGAGAGCACCAATCGATGGAGACAAAGCGCATCATGTCGA
TGGTGATAGTACCAACGACACGATCGAAAACCTGGAGTGGACGTCCATCG
GCGAGGCTGGCACCACTCGATCGTATCCACGGTCGATTGCAAGCAAGCCG
GTTGTCGCCACCAGTGAAGATCGTAAAGAGAGATTGTTGTTTGTGTCGGC
GCTTGAGGCTGCTTCTCTCGTCGACACTCGTCGCGTCGACATATACGACG
CCATCGGAAGTGGACGACTGATATCGGATGGCGTCTGCGGATACACTTTC
GACTACGATGAATCCGACAACCCCGTGTGCGAAGTACGGAGTGTGTCTGG
GTCGGATGTATACAAGGTATCCCGTGACGGGAGAGTACGCATGGAAAACG
GTCGATGGACGTTTGGTTCAAGACACTGGAAAACCACGGGGGACTCCAAG
AAAGATAAACATGCGTACAGAAGAGTCGATATGATTGTAACCACAGGGGG
TACGAGAAAGACAAAGAAAAAGTACGTCCACGTTGTGGTTGCCGAGGCGT
TCCTTGGGGAATGTCCAACGGGGTACCAGGTAGACCACATCGACGGAAAC
AAGTCGAACAACGCCGTGTCCAACTTGGAGTACGTGAGCAAGAGAGAAAA
CGACCGGCGCACTTACGCCAACGGTGGGAGGAACCCTCCGGGAGAGAAAC
CAGTGCTGCTGATCAAACAAGATGGAACATTCTCATGGTTCAAGTCGTCG
TCAGAGGGTGCTCGGCAGATGGGAGTCAGCGTAGCCACCATCTCGATCAA
CTGCTCCACGGGCAGGAAGAACAGGGCGGGAAACTACTGGGCACACGACA
AGGCTGTTGTGCAACGTGGCGGGGGCGAACCGCCGACAAAGCGTTTTGAA
TCGCTGTCAAAAGCTTCTAGCTACACGGGAGAGAGCATTCTTAGCATTCT
CATGTCGTGTCGAAACACAGAGGACGAGTCCTGGAAGTATGTTGAATAA
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