mRNA_Ecto-sp13_S_contig88341.20322.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A6H5L1F6_9PHAE (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.760e-32 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV
Sbjct: 150 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 207
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: D7G8R2_ECTSI (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI) HSP 1 Score: 119 bits (298), Expect = 5.300e-32 Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVVSIMSDWFVEAANHTCGS PPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV
Sbjct: 108 EFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 165
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A7S0DUQ4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DUQ4_9CRYP) HSP 1 Score: 97.1 bits (240), Expect = 4.390e-24 Identity = 39/59 (66.10%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVF 186
EFVV+IMS+W+ E+ANHTCG+FPPEV+EMDVAGLTP+ S +++PPR+ ESA+N EC++
Sbjct: 33 EFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSEMISPPRVAESAINFECRLI 91
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: L1IE62_GUITC (Flavin_Reduct domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC) HSP 1 Score: 97.4 bits (241), Expect = 2.700e-23 Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVF 186
EFVV+IMS+W+ E+ANHTCG+FPPEV+EMDVAGLTP+ S I++PPR+ ESA+N EC++
Sbjct: 130 EFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRLI 188
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A150H2H2_GONPE (Flavin_Reduct domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H2H2_GONPE) HSP 1 Score: 94.0 bits (232), Expect = 3.010e-22 Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVV+I+S+WF EAANHTCG FPP VDEM +AGLTP+ ST V PPR+ ESAV+MEC+V
Sbjct: 70 EFVVNIISEWFAEAANHTCGDFPPGVDEMALAGLTPLPSTKVKPPRVAESAVHMECRV 127
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A7S1HEZ1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEZ1_HEMAN) HSP 1 Score: 92.8 bits (229), Expect = 2.010e-21 Identity = 40/58 (68.97%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVV+IMSDWF+EAANHTCG F PE +EMD+AGLTP+ S +V PPR+ ESA +MEC++
Sbjct: 143 EFVVNIMSDWFIEAANHTCGDFVPEDNEMDLAGLTPLPSVVVKPPRVGESAFHMECRL 200
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A7S0W0N2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N2_9CRYP) HSP 1 Score: 91.7 bits (226), Expect = 5.030e-21 Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVV+IMSDWFVEAANHTCG F PE EMD+AGL P+ S +V PPR+ ESA +MEC++
Sbjct: 137 EFVVNIMSDWFVEAANHTCGDFAPEDSEMDIAGLHPLPSAVVKPPRVAESAFHMECRL 194
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A835T8W2_CHLIN (Flavin_Reduct domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T8W2_CHLIN) HSP 1 Score: 92.4 bits (228), Expect = 1.020e-20 Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVV+IMS+WFVEAANHTCG FP VDEM +AGLTP+ ST V PPR+ ESAV+MEC++
Sbjct: 183 EFVVNIMSEWFVEAANHTCGDFPRGVDEMALAGLTPLASTKVRPPRVAESAVHMECRL 240
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A7S3QX28_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QX28_DUNTE) HSP 1 Score: 91.3 bits (225), Expect = 1.140e-20 Identity = 41/58 (70.69%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
+FVV+IMSDW+VEAANHTCG + PEVDEM + GLTP S V PPRIKE+AV MECK+
Sbjct: 152 QFVVNIMSDWYVEAANHTCGDYDPEVDEMSLTGLTPEPSQRVTPPRIKEAAVQMECKL 209
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Match: A0A2K3DJM3_CHLRE (Flavin_Reduct domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DJM3_CHLRE) HSP 1 Score: 91.7 bits (226), Expect = 1.640e-20 Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 10 EFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKV 183
EFVV+IMS+WFVEAANHTCG +P VDEM +AGLTP+ ST V PPR+ ESAV+MEC++
Sbjct: 183 EFVVNIMSEWFVEAANHTCGDYPRGVDEMKLAGLTPLASTKVRPPRVAESAVHMECRL 240 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88341.20322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig88341.20322.1 >prot_Ecto-sp13_S_contig88341.20322.1 ID=prot_Ecto-sp13_S_contig88341.20322.1|Name=mRNA_Ecto-sp13_S_contig88341.20322.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp MSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECback to top mRNA from alignment at Ecto-sp13_S_contig88341:234..422- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig88341.20322.1 ID=mRNA_Ecto-sp13_S_contig88341.20322.1|Name=mRNA_Ecto-sp13_S_contig88341.20322.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig88341:234..422- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig88341:234..422- >mRNA_Ecto-sp13_S_contig88341.20322.1 ID=mRNA_Ecto-sp13_S_contig88341.20322.1|Name=mRNA_Ecto-sp13_S_contig88341.20322.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=162bp|location=Sequence derived from alignment at Ecto-sp13_S_contig88341:234..422- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |