mRNA_Ecto-sp13_S_contig8803.20288.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: D7FM29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM29_ECTSI) HSP 1 Score: 263 bits (671), Expect = 1.930e-79 Identity = 128/138 (92.75%), Postives = 133/138 (96.38%), Query Frame = 1
Query: 118 VRAVF*EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGFK 531
V + EMTFNIDGISLLER EKPDEGLAKELGGNVVFDAEFN+GTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKK+VNCGVVAFTLESGVYEGRQA+KIEP+SIVSVYGGFK
Sbjct: 358 VHSALQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLESGVYEGRQAYKIEPDSIVSVYGGFK 495
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A6H5KZS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS7_9PHAE) HSP 1 Score: 238 bits (606), Expect = 2.610e-72 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 1
Query: 94 LCRHAAIYVRAVF*EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLE 456
LCRH AIYVRAVF EMTFNIDGISLLER EKPDEGLAKELGGNVVFDAEFN+GTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKK+VNCGVVAFTLE
Sbjct: 167 LCRHDAIYVRAVFQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLE 287
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A835ZDW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW6_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.460e-46 Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 136 EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGFK 531
E+TFN+DGISLLE E PD + + LG + FDAEFN GTK L + G RM +WAS RPEDTVVC GHSL+FR FFR FLP +A H +K+KKIVNCGV+AFTL+ G GR A+K++P SI VYGGFK
Sbjct: 201 EVTFNVDGISLLENGEVPDGSVGRALGQEIAFDAEFNAGTKGLRSNGYARMGEFCKWASARPEDTVVCAGHSLWFRDFFRNFLPFAARHASKQKKIVNCGVIAFTLQQGTLNGRPAYKVDPASITVVYGGFK 332
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S3ERH8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ERH8_9EUKA) HSP 1 Score: 127 bits (318), Expect = 1.620e-31 Identity = 69/142 (48.59%), Postives = 91/142 (64.08%), Query Frame = 1
Query: 103 HAAIYVRAVF*EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGF 528
H AI + + E++ N D +S+ E P E+G V DA N G K+LG GM+R++ A WASQR E T++ GHSL+FRSFF+ FLP+++ H KKKKIVNCG VAFTL S +Q F+I+P+SI VYGGF
Sbjct: 13 HEAILLHSSCQEISRNFDTLSIARPFEAPALDYGAEVG--VKLDASVNRGNKSLGFRGMQRVEHFARWASQRSERTIIVGGHSLWFRSFFQVFLPKASEHICKKKKIVNCGAVAFTLHS---TKQQRFRIDPDSITVVYGGF 149
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S2FH68_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FH68_9EUKA) HSP 1 Score: 119 bits (297), Expect = 2.220e-27 Identity = 62/134 (46.27%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 136 EMTFNIDGISLLEREEKPD-EGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGV--YEGRQAFKIEPESIVSVYGGF 528
E++ N D ++L P E L + FD NLG K TG+KR++A A+WA+ RPE T++ GHSL+FR+FF +LP+S+ H AKKKKI+NCGVV FTL+ G G + I SI SVYGGF
Sbjct: 111 EISRNFDTLALAPFSSTPPMEPTLDFLAPSATFDGSANLGNKTFSFTGLKRLQAFADWAADRPESTIIVGGHSLWFRNFFALYLPKSSTHVAKKKKIINCGVVGFTLQVGRDRQTGLPKYLINESSIASVYGGF 244
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S1J5Y9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5Y9_9EUGL) HSP 1 Score: 119 bits (299), Expect = 8.330e-27 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 112 IYVRAVF*EMTFNIDGISLLEREEKPDEGLAKELGGNV-VFDAEF-----NLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGFK 531
IY+ + E++ N+D ++L P + +EL G V D ++ N G KAL + G KRM A AEW +R E TV+ GHSL+F+ FF +LP+S H A+K K+VN GVVAFTL + GR + I PESI VYGGF+
Sbjct: 190 IYILSCLQEISRNVDALALAPTGAVPRIDMPRELDGKAGVLDRQYMEGTWNYGNKALSSNGGKRMNAFAEWVFKRDEGTVIAAGHSLWFKHFFNTYLPRSCDHPARKLKMVNSGVVAFTLNQVKFSGRMVYYIVPESIQVVYGGFE 335
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S1X7Z0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X7Z0_9CHLO) HSP 1 Score: 119 bits (298), Expect = 1.050e-26 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 1
Query: 136 EMTFNIDGISLLEREEKPD-EGLAKELGGNV----VFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGF 528
E++FN+D +L PD +A E+ +FD N G K + TG++RM A E R E T++ GHSLYFRSFF+ FLP+ A H AKKKK+VN G VAF + V+ G+Q ++IEP+S+ VYGGF
Sbjct: 199 EISFNLDAGALAPALGIPDLHAIAPEMWSTYDPQELFDPSLNTGDKPIFGTGLQRMNAFCELVFGREESTIIATGHSLYFRSFFQTFLPRGAEHVAKKKKMVNSGTVAFNISRAVHAGKQVYRIEPDSVTVVYGGF 334
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S4C2E3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C2E3_CHRCT) HSP 1 Score: 118 bits (295), Expect = 4.040e-26 Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 103 HAAIYVRAVF*EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVY-EGRQAFKIEPESIVSVYGGF 528
H I + + E+T N+D S+ R P EL + D FN G K+L TG++R+ A WA+ RPE ++ GHSL+FR+FF+ FLP+ H +KK KIVNCG V FTL++G+ EG +I+PES+ +YGGF
Sbjct: 213 HEPILLHSSCQEITRNVDSQSIATRGGAPALYGCDELERPLRLDGTFNRGNKSLAFTGIRRLNDFARWAADRPEQCIIVAGHSLWFRTFFQLFLPKQFEHISKKSKIVNCGAVGFTLQTGLTPEGALRHRIDPESLRVIYGGF 355
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A6T7VPM7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7VPM7_9CRYP) HSP 1 Score: 110 bits (275), Expect = 2.050e-23 Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 85 WNALCRHAAIYVRAVF*EMTFNIDGISLLEREEKPDE--GLAKE---LGGNVVFDAEFNLGTKALGNTGMKRMKALAEWA---SQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLESGVYEGRQAFKIEPESIVSVYGGFK 531
W+ + +++R+ E++ NID ++L ++ P G A E L F+A N G K L ++R+ + A W S P ++ GHSLYF+SFF+ FL ++ H AK++KIVNCGVVAFTL G +G++ F+I+PESI V GGFK
Sbjct: 194 WSRVQAGEKVHIRSDLQEISRNIDTMALAPAKDVPPITLGAALEFPSLDKATRFEASGNRGQKDLFGNPVRRISSFAAWCFDESNPPGAAIIAGGHSLYFKSFFQAFLGRAVEHQAKQRKIVNCGVVAFTLHKGTVDGKELFRIDPESITVVTGGFK 350
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Match: A0A7S0HZQ7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HZQ7_9EUKA) HSP 1 Score: 110 bits (274), Expect = 3.090e-23 Identity = 59/140 (42.14%), Postives = 87/140 (62.14%), Query Frame = 1
Query: 136 EMTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKIVNCGVVAFTLES----GVYEGRQA-----FKIEPESIVSVYGGF 528
E++ N D +S+ E + P + EL + +D N G+K+LG GM R++ A WA++R E T++ GHSL+F+ FF+ +LP++A H KKKKIVNCG V FTL++ GV GR + +I+P SI +YGGF
Sbjct: 214 EISRNFDTLSITEAGKGPVLRGSVELERKLHYDGTANKGSKSLGFRGMHRIEDFAAWAAKRNESTIIVAGHSLWFKEFFKLYLPKAADHTCKKKKIVNCGAVGFTLQTASPRGVTLGRASDSSLRHRIDPTSISVIYGGF 353 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8803.20288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8803.20288.1 >prot_Ecto-sp13_S_contig8803.20288.1 ID=prot_Ecto-sp13_S_contig8803.20288.1|Name=mRNA_Ecto-sp13_S_contig8803.20288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp MTFNIDGISLLEREEKPDEGLAKELGGNVVFDAEFNLGTKALGNTGMKRMback to top mRNA from alignment at Ecto-sp13_S_contig8803:459..3037+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8803.20288.1 ID=mRNA_Ecto-sp13_S_contig8803.20288.1|Name=mRNA_Ecto-sp13_S_contig8803.20288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2579bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8803:459..3037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8803:459..3037+ >mRNA_Ecto-sp13_S_contig8803.20288.1 ID=mRNA_Ecto-sp13_S_contig8803.20288.1|Name=mRNA_Ecto-sp13_S_contig8803.20288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8803:459..3037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |