mRNA_Ecto-sp13_S_contig8761.20235.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8761.20235.1
Unique NamemRNA_Ecto-sp13_S_contig8761.20235.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: D7G728_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G728_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 6.880e-137
Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE 600
            +AVWADQFDNPANQLAHYETTGPEILAQ GGKIDAWVAAVGTGGTLAGTSRFLKENVP IKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE
Sbjct:  155 NAVWADQFDNPANQLAHYETTGPEILAQAGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE 354
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A1X2G6Y3_9FUNG (Cysteine synthase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G6Y3_9FUNG)

HSP 1 Score: 237 bits (604), Expect = 2.460e-74
Identity = 118/200 (59.00%), Postives = 152/200 (76.00%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENV-PRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QFDN AN+ AH ETTGPEI+AQT G++D +V A GTGGTLAGT+R+LKE    ++K F ADPPG+ +++Y+T G+ +R EGGSITEGIGQGR+T NL   + LIDGAF IPD E++ M+Y LL  EGI+VGASSALN+V A K A+ +G G  +V++LCDGA RYQSRLFS+ WL  K L  +IPE  +  + L
Sbjct:  160 NAVWTNQFDNIANRRAHIETTGPEIMAQTNGEVDGFVCATGTGGTLAGTARYLKEQKGDKVKVFLADPPGSVLYSYFTTGKFDR-EGGSITEGIGQGRITDNLDQDKDLIDGAFCIPDEESVHMLYRLLDEEGIYVGASSALNVVAAAKMAKQLGPGKKIVTILCDGAYRYQSRLFSRQWLESKKLLTAIPEHLQKYVVL 358
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A2T9Z8Q6_9FUNG (PALP domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Z8Q6_9FUNG)

HSP 1 Score: 235 bits (599), Expect = 1.280e-73
Identity = 114/200 (57.00%), Postives = 148/200 (74.00%), Query Frame = 1 
Query:    4 AVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYY-TKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE 600
            A+W +QFDN AN+ AH ETTGPEILAQT GKID +  A GT GT AG +RFLKEN   +KC+ ADPPG+ + AY  +KG++    G SITEGIGQGR+T NL    GL+DG+F IPD ETI M+Y+LL  +G ++GAS++LN+V A K A+ +G G T+V++LCDGA RYQSRLFS+SWL  K L+ +IP+E +    L+
Sbjct:  157 AIWTNQFDNTANRQAHIETTGPEILAQTNGKIDGFTCATGTAGTFAGVTRFLKENAKDVKCYIADPPGSVLHAYIQSKGKLTDRSGSSITEGIGQGRITDNLKQDIGLVDGSFSIPDDETIRMLYSLLDKDGFYLGASTSLNVVAAYKLAKLLGPGKTIVTILCDGAYRYQSRLFSRSWLESKNLYTAIPDELKKYAVLD 356
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A397EPQ3_9STRA (PALP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EPQ3_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.680e-73
Identity = 115/198 (58.08%), Postives = 146/198 (73.74%), Query Frame = 1 
Query:    4 AVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            AVW +QFDN AN+LAH +TTGPEI  QT G IDA+  A GTGGTLAGT  +LK+  P +K   ADPPG+ +F +   G +ER   GS+TEGIGQGRVT NL   +  ID A  + D  +I MV+ LL  EGIFVGASS LN+V A   A+++G G+TVV++LCD A+RYQSRLFS+SWL  KGLF+++PE+CR+L+TL
Sbjct:   12 AVWTNQFDNVANRLAHTKTTGPEIWEQTEGNIDAFTCATGTGGTLAGTGIYLKQKNPNVKIVLADPPGSVLFNFVKNGVLERQGTGSVTEGIGQGRVTDNLK--DSPIDDAVHVEDHRSINMVFRLLKDEGIFVGASSGLNVVAACDVAKSIGPGSTVVTILCDSASRYQSRLFSRSWLESKGLFDAVPEDCRHLVTL 207
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A507EEA6_9FUNG (PALP domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EEA6_9FUNG)

HSP 1 Score: 233 bits (595), Expect = 6.280e-73
Identity = 119/200 (59.50%), Postives = 148/200 (74.00%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVP-RIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QFDN AN+ AH ETTGPEI  QTGG +D +V A GTGGTLAGT+R+LKE    ++K F ADPPG+ ++AY  +G++ R+   SITEGIGQGR+T NLA    LID A  IPDAETI MVY LL  EGIF+GASSALN+V A K A+ +G G  + +++CDGAARYQSRLFSK+WL  KGL ++IP+     I L
Sbjct:  163 NAVWTNQFDNVANRQAHIETTGPEIWRQTGGNLDGFVCATGTGGTLAGTARYLKEKSDGQVKVFIADPPGSVLYAYKKEGQLTRTGDSSITEGIGQGRLTDNLAPDWELIDDAVHIPDAETIEMVYRLLDEEGIFIGASSALNVVAAAKMAQQLGPGKRIATMICDGAARYQSRLFSKAWLESKGLLDAIPQHLHKYILL 362
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: W4GVP0_9STRA (PALP domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVP0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 7.120e-72
Identity = 115/199 (57.79%), Postives = 147/199 (73.87%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QFDN AN+LAH +TTGPEI  QT G IDA+  A GTGGTLAGT  +LK+  P +K   ADPPG+ +F +   G +ER   GS+TEGIGQGRVT NL   +  ID A  + D  +I MV+ LL  EGIFVGASS LN+V A   A+++G G+TVV++LCD A+RYQSRLFS+SWL  KGLF+++PE+CR+L+TL
Sbjct:  142 NAVWTNQFDNVANRLAHTKTTGPEIWEQTEGNIDAFTCATGTGGTLAGTGIYLKQKNPNVKIVLADPPGSVLFNFVKNGVLERQGTGSVTEGIGQGRVTDNLK--DSPIDDAVHVEDHRSINMVFRLLKDEGIFVGASSGLNVVAACDVAKSIGPGSTVVTILCDSASRYQSRLFSRSWLESKGLFDAVPEDCRHLVTL 338
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A507E5E8_9FUNG (PALP domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5E8_9FUNG)

HSP 1 Score: 229 bits (585), Expect = 2.470e-71
Identity = 116/201 (57.71%), Postives = 148/201 (73.63%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVP-RIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE 600
            +AVW +QFDN AN+ AH ETTGPEI  QTGG +D ++ + GTGGTLAGT+RFLK+    R+K F ADPPG+ ++A   +  +ER+   SITEGIGQGR+T NLA    LID A  +PDA TI MVY LL  EG+FVGASSA+N+V AV+ A+ +G G  +V+V+CDGAARYQSRLFS+SWL  KGL + +PE  +  I L+
Sbjct:  170 NAVWTNQFDNVANRQAHIETTGPEIWRQTGGNLDGFICSTGTGGTLAGTARFLKDKSQGRVKVFIADPPGSVLYALKKRNVLERTGDSSITEGIGQGRLTDNLAPDWDLIDDAIHVPDAATIEMVYRLLDEEGVFVGASSAMNVVSAVEMAKQLGPGKKIVTVICDGAARYQSRLFSRSWLDSKGLLQHVPEHLQKYILLK 370
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A067CBT4_SAPPC (Cysteine synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBT4_SAPPC)

HSP 1 Score: 228 bits (581), Expect = 4.050e-71
Identity = 116/199 (58.29%), Postives = 144/199 (72.36%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QFDN AN+ AHYETTGPEI AQT G +DA+  A GTGGTLAGT+ +LKE  P ++   ADPPG+ ++ +     +ER   GSITEGIGQGRVT NL      ID A  I D  +I MVY LL  EGIFVGASS LN+  AV  A+A+G G+T+V++LCD AARYQSRLFS+SWL  KGL E++P +CR L++L
Sbjct:  142 NAVWTNQFDNVANRRAHYETTGPEIFAQTQGDVDAFTCATGTGGTLAGTALYLKERKPSVRIVLADPPGSVLYRHVLDNVLERQGTGSITEGIGQGRVTDNLRGAP--IDDAVHIEDHRSIEMVYRLLKDEGIFVGASSGLNVTAAVDVAKAMGPGHTIVTILCDSAARYQSRLFSRSWLDAKGLLEAVPVDCRALVSL 338
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A1Y1Z1J0_9FUNG (Cysteine synthase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z1J0_9FUNG)

HSP 1 Score: 228 bits (581), Expect = 4.960e-71
Identity = 114/200 (57.00%), Postives = 145/200 (72.50%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPRIKCFAADPPGASMFAYYTKG-EMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QFDN AN+ AH ETTGPEI  QTGGK+D +  A GTGGT AGT+RFLK   P IK F ADPPG+ +++Y+  G ++    G SITEGIGQGR+T N+     ++D A LIPD +TI MVY+LL  EGI+VGASSALN V AV+ A+ +G G  +V++LCDGA RYQSRLFS+ WL  K L ++IP+E +  I L
Sbjct:  146 NAVWTNQFDNTANRQAHIETTGPEIWEQTGGKVDGFTCATGTGGTFAGTARFLKGKNPDIKLFVADPPGSVLYSYFKSGGKLTDRSGSSITEGIGQGRITDNMKNEVPIVDDALLIPDEKTIQMVYHLLDKEGIYVGASSALNAVAAVEMAKQLGPGKNIVTLLCDGAYRYQSRLFSRKWLESKSLIDAIPQELQKYIIL 345
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BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Match: A0A4P9W2E6_9FUNG (Cysteine synthase n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W2E6_9FUNG)

HSP 1 Score: 224 bits (572), Expect = 5.580e-71
Identity = 116/200 (58.00%), Postives = 146/200 (73.00%), Query Frame = 1 
Query:    1 SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKE-NVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITL 597
            +AVW +QF+N AN+ AH+ETTGPEI  QT GK+DA+  A GTGGTLAG +++LK+ +  R+K   ADPPG+++++  T G +ER+  GSITEGIGQGRVTGNL     LID A  + DAETI MVY LL  EGIFVGASSAL+ V AVK A  +G G+TV  +LCDGA RYQSRLFS++WL  KG+  + P+     ITL
Sbjct:   47 NAVWTNQFENLANRRAHFETTGPEIWRQTDGKLDAFTCATGTGGTLAGITQYLKDASAGRVKMILADPPGSALYSLKTTGVLERTGAGSITEGIGQGRVTGNLDEDFDLIDDAVHVSDAETIEMVYRLLDEEGIFVGASSALDFVAAVKVARMLGPGHTVAIILCDGAYRYQSRLFSRTWLETKGILSADPDHLHKYITL 246
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8761.20235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G728_ECTSI6.880e-13798.50Cysteine synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A1X2G6Y3_9FUNG2.460e-7459.00Cysteine synthase n=1 Tax=Hesseltinella vesiculosa... [more]
A0A2T9Z8Q6_9FUNG1.280e-7357.00PALP domain-containing protein n=1 Tax=Smittium me... [more]
A0A397EPQ3_9STRA1.680e-7358.08PALP domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A507EEA6_9FUNG6.280e-7359.50PALP domain-containing protein n=2 Tax=Spizellomyc... [more]
W4GVP0_9STRA7.120e-7257.79PALP domain-containing protein n=9 Tax=Aphanomyces... [more]
A0A507E5E8_9FUNG2.470e-7157.71PALP domain-containing protein n=1 Tax=Powellomyce... [more]
A0A067CBT4_SAPPC4.050e-7158.29Cysteine synthase n=2 Tax=Saprolegnia TaxID=4769 R... [more]
A0A1Y1Z1J0_9FUNG4.960e-7157.00Cysteine synthase n=1 Tax=Basidiobolus meristospor... [more]
A0A4P9W2E6_9FUNG5.580e-7158.00Cysteine synthase n=1 Tax=Blyttiomyces helicus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8761contigEcto-sp13_S_contig8761:3446..6453 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score397.5
Seed ortholog evalue3.7e-108
Seed eggNOG ortholog2880.D7G728
Model size603
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons5
EggNOG free text desc.cysteine synthase activity
EggNOG OGsCOG0031@1,KOG1481@2759
EC2.5.1.47
Cds size603
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464148.961744-CDS-Ecto-sp13_S_contig8761:3445..35701681464148.961744-CDS-Ecto-sp13_S_contig8761:3445..3570Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8761 3446..3570 -
1681464148.9744422-CDS-Ecto-sp13_S_contig8761:4035..41711681464148.9744422-CDS-Ecto-sp13_S_contig8761:4035..4171Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8761 4036..4171 -
1681464148.9838405-CDS-Ecto-sp13_S_contig8761:4947..50551681464148.9838405-CDS-Ecto-sp13_S_contig8761:4947..5055Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8761 4948..5055 -
1681464148.9968112-CDS-Ecto-sp13_S_contig8761:5723..58151681464148.9968112-CDS-Ecto-sp13_S_contig8761:5723..5815Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8761 5724..5815 -
1681464149.0085607-CDS-Ecto-sp13_S_contig8761:6311..64531681464149.0085607-CDS-Ecto-sp13_S_contig8761:6311..6453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8761 6312..6453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8761.20235.1prot_Ecto-sp13_S_contig8761.20235.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8761 3446..6453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8761.20235.1

>prot_Ecto-sp13_S_contig8761.20235.1 ID=prot_Ecto-sp13_S_contig8761.20235.1|Name=mRNA_Ecto-sp13_S_contig8761.20235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
SAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTS
RFLKENVPRIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTG
NLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTA
EAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE
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mRNA from alignment at Ecto-sp13_S_contig8761:3446..6453-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8761.20235.1 ID=mRNA_Ecto-sp13_S_contig8761.20235.1|Name=mRNA_Ecto-sp13_S_contig8761.20235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3008bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8761:3446..6453- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGCTGTGTGGGCCGATCAGTTCGATAACCCGGCCAACCAGCTCGCTCA
TTACGAAACCACCGGGCCGGAAATTCTGGCGCAAACCGGCGGGAAGATCG
ACGCCTGGGTGGCGGCTGTCGGTACCGGTGGGACTCTGGCAGGTGCGTGT
GGTGCATCCCTGGTGACGAGCTTTGACGAGCGTGTGTGTTATTCACTTCA
AAATTTCCAGCTGATGAATCGGGCGTTGCCCGGCAGTCGGTGCAGTCGGT
GTCGCAAGGACGGAGTAGCTACACCTTGATGGCACTCTGGTCGTACGTAC
GGATCCTGCGTCTCTACCACCCATTGCTGTGAAGACGGCGATGGACTGTG
TGGGTGGGTGAAGGCGTCCGCTAAGACAGTTACTGATACGACAGTTGAGC
TTTTCCCGAGTTTTGACCTGCTTTTGCGGCGGCTGCTGTCGAAGATGGAT
CGATTCGTGCTTCGAGGTGGCCTTGTGTCACCCTCGATTGCGCGTTCTAC
GCTACGTGATTTTCTTGCCATACAGGCAACAGTATACAGTGAAGGACCGC
TCGTGGCCTGTCTGCAACGTCTTCTAACGCTTGCACTCCTTGTCTTTGAT
GTTTACGACGCGTTGCGGTGCGGTTGCATTCAACGAAGGCACGTCACGAT
TCTTGAAGGAAAACGTGCCGAGGATCAAGTGCTTTGCGGCCGACCCGCCG
GGGGCCTCGATGTTCGCGTACTACACCAAGGTGCGTCCTCGAGACAAAAA
AAGCAACAACAACCCTTGTCTGTGACACCGACAGATTTTGCTGCGGTCTG
CAACGCTCGATGTGGTGGCCGTGCTGGCTCTGCTCCCAAGTTATAGATGC
TTCTAAGGTTGATATACATTGATGGCTAGTTGAGGCCGTTCGCCCGTTGC
TAGGCGCCGCAGAGCGATCGCGGTTATTTTTTCTAGCCTGGCGCCGCAAG
TGCTTTGATTTGGTGGCCCCATGAAACAACACCGGGCATTGTCTGTTGCT
CTTCTCGCACTGTATTTCTGTTGCTCTGCTCGCGCTGTATTTCTGATGAC
TTGTTGTTGATATGCATTGATTGCTGTGTGTTGGGGGGCGAGACCTTTTT
ATCGTCTGGTTTTCCCCATTGGAGTGAGGAGGCCGGGCGTAGCTTGCCAG
AACTCATCCCCGTGGTGAGAGTTGTCAACCCTCCATGCTCTCAACCGACG
CCCAAAGCTGAGACTTCTCAGTGATTCACGGCAATTCTAAGCTAGTCCGC
CTCACGCCCCCCCCCCCTCCCGTCGTGTGGAATCAATGCTCCATCCTCTC
GAGGGCACGAGATCAATTGTCAAACCGCTCAAGGCATGCAAAACATGAGT
AAACCCCCCACCTCCTGCTGTTCTTTGTTTTGATCAACTCCCGAAAAGGG
CGAAATGGAACGGTCGGAAGGTGGCTCGATCACGGAAGGGATCGGGCAAG
GGAGAGTGACCGGGAACCTGGCGACGTGCGAAGGGTTGATCGATGGGGCT
TTCTTGGTAAGAGCAGGCATGACAACATTGCAACATTACAACGATACGAC
ATTACAGAGACGCCGGAGTGCGATGCTTTCCACAACAACATTGAGACGTT
GGAATTCGCATGAGACATTGGAATTGGCATGTCTCCAAGAAAATGAAGGC
GCTGTACTAGGTGAGAGGGTCAGCTGTTTGGAAATAAGATTCCGGCGAGG
TTTTTGAGAGAAGCGTTGTTGCTGACAACGTTTTGCCTCAGAGACATGGA
AGCACCTAGCGCGGAACCGGAGATCCGCCAAGATGGAATGGAAATCCATA
TGTCCTATGATATGTGTTTTGCTTGATCCGAAACTATTAGTAGGCTGCGT
ACAGAATTTCCTCGGTATTGTGTTTGTTTTGGTATGCAAAGGATTCTTTC
GTTTTTGACCTTGCAATGTCGGGATAGGACCGGGAGGGGCGGCTTGGTGC
GGTTTTGAGTGCCACTGTACATGCTTGGGATCGCACTTCCATGCGCGCCT
CACGGTTTAACGGTTTTGCAGGTGTCGTGCGTCTAGTGTCAGTAGCGGAA
GCTTTTGTCGACCCGAGTTGTCTGGCGATTATTGCCCGAAAATCATCTTT
AGCTTGCGTTTTTCTACTCGTACATGCGGAGTGCTTGGTATCGGTTCGTT
GGGCGGTTATGAGGCGCGGACCACAATAGTTATTGCAACAATATCTACAA
AAACACCAGCTCCATCCCTCTACACATTTGTCTTGCGCCCGCGGGCTACG
TGACGACGTTCGCGACGTTGTTCGTTGACCAGATTCCCGACGCGGAAACG
ATCGCGATGGTCTACAACCTCTTACACTACGAGGGCATCTTCGTGGGAGC
GTCTTCGGCGCTGAACATGGTTGGGGCGGTCAAGACGGCGGAGGCTGTAG
GGGCGGGCAATACTGTAGGTGAGCAGCATTCCGTGCATGATGAGTGTTGG
TTTTTCGGCTTGTGAAGGGGAATGGTTTTGCACAGAATGTGATTTAGTGT
TGAGGGCGCATAGACGTACCACTTTTCTAGCCGTGGCGTTCATGACACAA
CTGCTGTTGCGTTGCATTGTTTTCCCGACAAACTGGATTATGTTATGGGA
ACATTAGTATTTCGTCGATACGACCGTTGGAGCCACACTTGCATTAGAAT
GAGATGAGAATGAGTGCGTGATTATCATCATGTTGCTGGAGGGCCTGGGG
GGGGGCATGAACACGGGCTTGTAAGTACGGGGATGTATCGACCGGGCGTT
TCTCCCGCTCGAATTTGTGTCGCGAAGGACGCCATCGTTGGGGGGTGAAG
AAACCATCCCTAAATCTCATCCCCAACTGCTGTCAGATTTGGATTCATTT
TCCGACGCCGTTTGTGCTGCGCACTCGTGACAGTGTCGGTGCTGTGCGAC
GGAGCGGCGCGGTACCAGAGCCGGCTGTTCAGCAAGTCATGGCTGACGGA
GAAGGGGCTGTTCGAGAGCATTCCCGAAGAGTGCCGGTACCTCATCACCC
TAGAATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8761:3446..6453-

>mRNA_Ecto-sp13_S_contig8761.20235.1 ID=mRNA_Ecto-sp13_S_contig8761.20235.1|Name=mRNA_Ecto-sp13_S_contig8761.20235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8761:3446..6453- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGCTGTGTGGGCCGATCAGTTCGATAACCCGGCCAACCAGCTCGCTCA
TTACGAAACCACCGGGCCGGAAATTCTGGCGCAAACCGGCGGGAAGATCG
ACGCCTGGGTGGCGGCTGTCGGTACCGGTGGGACTCTGGCAGGCACGTCA
CGATTCTTGAAGGAAAACGTGCCGAGGATCAAGTGCTTTGCGGCCGACCC
GCCGGGGGCCTCGATGTTCGCGTACTACACCAAGGGCGAAATGGAACGGT
CGGAAGGTGGCTCGATCACGGAAGGGATCGGGCAAGGGAGAGTGACCGGG
AACCTGGCGACGTGCGAAGGGTTGATCGATGGGGCTTTCTTGATTCCCGA
CGCGGAAACGATCGCGATGGTCTACAACCTCTTACACTACGAGGGCATCT
TCGTGGGAGCGTCTTCGGCGCTGAACATGGTTGGGGCGGTCAAGACGGCG
GAGGCTGTAGGGGCGGGCAATACTGTAGTGTCGGTGCTGTGCGACGGAGC
GGCGCGGTACCAGAGCCGGCTGTTCAGCAAGTCATGGCTGACGGAGAAGG
GGCTGTTCGAGAGCATTCCCGAAGAGTGCCGGTACCTCATCACCCTAGAA
TAG
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