mRNA_Ecto-sp13_S_contig8748.20221.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: D7FKX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX8_ECTSI) HSP 1 Score: 1086 bits (2809), Expect = 0.000e+0 Identity = 602/692 (86.99%), Postives = 618/692 (89.31%), Query Frame = 1
Query: 1 MSVATLEFDEVWRWDGWTSLDDHANDGAVDSDGDVVLVGSQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGIWTDTAGADEFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXXXXTPVTLAPVTTPSPLAISADAGDPTPSPFQFNQQPLTTQSPVGRGVTTPAPTTSAAAAAVLSEWEIAAIAGXXXXXXXLLGLCLFCFRRKRPERQQGAAKAGASRPLPVEGFGDLSVQGENLQPRPPVKASGVAEVAPXXXXXXXXXLPPPAEPRLPPPPAYNSXXXXXXEVAATETEEXXXXXXYEQTNAPEPAAAPAEAPWERLAKRVARVPSKKAFEQNYRNISVSHYAPYAPSTTDR 2076
MS A EFDEVWRWDGWT+LD+H NDGAVD DG+VVLVGSQGYAA ED LDDTFVDAYSGDFAAVKL+GASGEV WTWTASSLGSEAD FLAVDTDS NDIVMGGRTEGYWSSSNPD+ HIAVVKLDGGTGDEIWRYQEHPPDSYTSLGS YYGY V GVAVDGDDNC LVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGES SFD+L +VKVDS GDLI VGIGGDEDAVNVVVVKF GTDGAVLWEYSPVTS THDV SVDVDTQDDVYIAGGYDALNLQGT AETPVVLKLDGATGDVVWTYEGVATSSAGF SVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGV+GDELGRYQDGTTDDDSL FVGFDSVGGL++GG WTDT G EFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXX VTLAP+TTPSPLAISADAGDPTP+PFQ NQ P TT+SPVGRG+TTPAPTTSAAAAAVLSEWEIAAIAG LLGLCLFCFRRKRPE QQGAAK GASRPLPVEGFG LSVQGE LQPRPPVKASGVAE AP LP A PAYNSXXXXXXEV ATETEE XXXXXYE+ NAPEPAAAPAEAPWERLAKRVARVPSKKAFEQNYRNISVS YAPYAPSTT+R
Sbjct: 1 MSAAFPEFDEVWRWDGWTTLDEHTNDGAVDLDGNVVLVGSQGYAAAEDLLDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADMFLAVDTDSNNDIVMGGRTEGYWSSSNPDSVAHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSYFYYGYGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIVVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVATSSAGFRSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDSLKFVGFDSVGGLILGGSWTDT-GEAEFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXX----VTLAPMTTPSPLAISADAGDPTPAPFQLNQPPQTTESPVGRGLTTPAPTTSAAAAAVLSEWEIAAIAGGGSFLLLLLGLCLFCFRRKRPEGQQGAAK-GASRPLPVEGFGGLSVQGEILQPRPPVKASGVAEFAPPAPPAPKTPLPXXAXXXXXXXPAYNSXXXXXXEVVATETEEVXXXXXYEEMNAPEPAAAPAEAPWERLAKRVARVPSKKAFEQNYRNISVSQYAPYAPSTTNR 686
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: D8LJC9_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC9_ECTSI) HSP 1 Score: 881 bits (2277), Expect = 4.140e-316 Identity = 497/694 (71.61%), Postives = 521/694 (75.07%), Query Frame = 1
Query: 1 MSVATLEFDEVWRWDGWTSLDDHANDGAVDSDGDVVLVGSQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGIWTDTAGADEFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXXXXTPVTLAPVTTPSPLAISADAGDPTPSPFQFNQQPLTTQSPVGRGVTTPAPTTSAAAAAVLSEWEIAAIAGXXXXXXXLLGLCLFCFRRKRPERQQGAAKAGASRPLPVEGFGDLSVQGENLQPRPPVKASGVAEVAPXXXXXXXXX---LPPPAEPRLPPPPAYNSXXXXXXEVAATETEEXXXXXXYEQTNAPEPAAAPAEAPWERLAKRVARVPSKKAFEQNYRNISVSHYAPYAPSTTD 2073
MS A EFDEVWRWDGWT+LD+H NDGAVD DG+VVLVGSQGYAA E +DDTFVDAYSGDFAAVKL+GASGEV WTWTASSLGSEAD FLAVDTDS NDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTS G++VY+G V GVAVDGDDNC LVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGES SFD+L +VKVDS GDLIAVGIGGDEDAVNVVVVKF GTDGAVLWEYSPVTS THDV SVDVDTQDDVYIAGGYDALNLQGT AETPVVLKLDGATGDVVWTYEGV TSSAG VAVDLTTGWVVGAGWT GTWLTGAAQGGYDFAAVVLDGV+GDELGRYQDGTTDD+ LSFVGFDSVGGL++GG WTDT G DEFVAIKFAP+ PT L++WEI AIAG LLGLC+FCFRRK + QQ AAK G+S+ PVE F SVQGE LQPRP V SG+ E AP XXXXXXX LPPPAEP L P XXXXXX XXXXX YE+ NAPEPAAAPAEAPWERLAKRV RVPSKKAFEQNYR+ISVS YAPYAPSTTD
Sbjct: 1 MSAAIPEFDEVWRWDGWTTLDEHTNDGAVDLDGNVVLVGSQGYAAAEYTIDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADTFLAVDTDSNNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSWGNSVYHGLGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIAVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVTTSSAGLICVAVDLTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDEYLSFVGFDSVGGLILGGSWTDTGG-DEFVAIKFAPWNSSYPTTGTE-------------------------------------------------------------------------------ALAQWEIGAIAGAGALFLLLLGLCIFCFRRKSSQGQQDAAK-GSSQIFPVENFVGPSVQGEVLQPRPLVIVSGMGEFAPPAXXXXXXXXTPLPPPAEPPLSP--XXXXXXXXXXXXXXXXXXXXXXXXSYEEMNAPEPAAAPAEAPWERLAKRVDRVPSKKAFEQNYRDISVSRYAPYAPSTTD 611
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: A0A6H5KD80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD80_9PHAE) HSP 1 Score: 763 bits (1971), Expect = 6.200e-272 Identity = 408/472 (86.44%), Postives = 428/472 (90.68%), Query Frame = 1
Query: 1 MSVATLEFDEVWRWDGWTSLDDHANDGAVDSDGDVVLVGSQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGIWTDTAGADEFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXXXXTPVTLAPVTTPSPLAISADA 1416
MSVAT EFDEVWRWDGWT+ D+ GAVDSDGDVVLVG+QGYAA ED +DDTFVDAYSGDFAAVKL+GASGEV WTWTASSLGSEAD FLA DTDS ND++MGG TEGYWSSSN D+ PH+A VKLDG TGDEIWRYQE PPDSYTSL S YYG V+GVAVDGDDNCFL GQTYGSLV+GEGDPGDSDFFVIKLDGTDGSE+WTVQGGESTSFDA VKVDS GDLIAVGIGGDEDAVNVVV KF GTDGAVLWEYSPVTSFTHDV +SVDVDTQDDVYIAGGYDALNL G AETPVVLKLDGATGDVVWTYEGV TSSAGF +AVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGV+GDELGRYQDGTTDDD LSFVGFDSVGGL++GG WTDT G DEFVAIKFAPFEL+APTPAXXXXXXXXXXXXXXXXXXXXXXX VTLAP+TTPSPLAISAD+
Sbjct: 1 MSVATPEFDEVWRWDGWTTSDETLTHGAVDSDGDVVLVGTQGYAAAEDLVDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADVFLASDTDSNNDVIMGGTTEGYWSSSNHDSVPHLAAVKLDGSTGDEIWRYQERPPDSYTSLESFFYYGSGSVLGVAVDGDDNCFLAGQTYGSLVFGEGDPGDSDFFVIKLDGTDGSEMWTVQGGESTSFDAFHNVKVDSGGDLIAVGIGGDEDAVNVVV-KFSGTDGAVLWEYSPVTSFTHDVPQSVDVDTQDDVYIAGGYDALNLHGILAETPVVLKLDGATGDVVWTYEGVNTSSAGFSRIAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDYLSFVGFDSVGGLIIGGQWTDTGG-DEFVAIKFAPFELIAPTPAXXXXXXXXXXXXXXXXXXXXXXXXXVTLAPMTTPSPLAISADS 470
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: D8LJD0_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD0_ECTSI) HSP 1 Score: 709 bits (1831), Expect = 1.090e-249 Identity = 373/495 (75.35%), Postives = 407/495 (82.22%), Query Frame = 1
Query: 118 SQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGIWTDTAGADEFVAIKFAPFELVAPTPAXXXXXXXXXXXXXXXXXXXXXXXTPVTLAPVTTPSPLAISADAGDPTPSPFQFNQQPLTTQSPVGRG-VTTPAPTTSAAAAAVLSEWEIAAIAGXXXXXXXLLGL 1599
S+GYAA ED LDDTF DAYSGDFAAVKLDGASG++ WTWT SSLGS AD FLA DTDS +D+VMGGRTEGYWSSSNPD+ H+A VKLDG TGDEIWRYQEHPPD+YTSLGS YYG V GVAVDGDDNCFLVGQT+GSLV+GEGD GDSDFFVIKLDGTDGSEIWTVQGGESTS+D VKVDSAGDL+A+GIGGDEDA+NVVVVKF G DG++LWEYSPVTSFTHDV ESVDVDTQDDVY+AGGYDALNL+G AETPVVLKLDGATGDVVWTYEGVATS AGF VAVD TTGWVVGAGWT GTWLTGAAQGGYDFAAVVLDG +GDE+GRYQDGTTDDD LSFVGFD+VGGL++GG WTDT GADEFVAIKFAP P P+ XXXXXXXXX V TPSP+A+ + +GDPT +P NQ P TT SPVGRG ++TPAPTT+AA L++WEI AIAG LLGL
Sbjct: 44 SRGYAAAEDLLDDTFEDAYSGDFAAVKLDGASGDLLWTWTDSSLGSAADLFLAGDTDSNDDVVMGGRTEGYWSSSNPDSVAHLAAVKLDGSTGDEIWRYQEHPPDTYTSLGSYFYYGSGSVTGVAVDGDDNCFLVGQTWGSLVFGEGDAGDSDFFVIKLDGTDGSEIWTVQGGESTSYDFFVDVKVDSAGDLVAIGIGGDEDAINVVVVKFSGIDGSILWEYSPVTSFTHDVPESVDVDTQDDVYLAGGYDALNLEGDLAETPVVLKLDGATGDVVWTYEGVATSRAGFFGVAVDPTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGDTGDEIGRYQDGTTDDDYLSFVGFDAVGGLILGGSWTDT-GADEFVAIKFAPGSASTPAPSSLQTTFSPLSSSLXXXXXXXXXLA------VPTPSPIALPSGSGDPTTAPLAGNQPPSTTPSPVGRGSISTPAPTTAAAGTESLAQWEIGAIAGGGTFLLLLLGL 531
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: A0A6H5LD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD60_9PHAE) HSP 1 Score: 383 bits (983), Expect = 9.570e-124 Identity = 202/322 (62.73%), Postives = 228/322 (70.81%), Query Frame = 1
Query: 229 TWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGL 1194
+WT SSLGSEAD F A TDS N I++GGRTEGYWSSS TP + +V W P + T+ + GQT G LVYGEGD GD DFF KLDGTDGSEIWT QGG STSFD+ + V V+S GDL+AVGI GD A+++ VVK G DG VLWEYSPVTS THDV SVDVD QDDV + G YDALNLQG+ AETPVVLKLDGATGDV WTYEG+ATS GF+ +AVDLTTGWVVGAGWT GTW+TGAAQGGYD AAV+LDGV+G+ELGRYQ+GTTDDD L+F GFDS GG
Sbjct: 46 SWTDSSLGSEADVFFAAATDSNNGIILGGRTEGYWSSS----TPELCLV----------W-----PSTAKTTASCS----------------------GQTSGCLVYGEGDAGDCDFFATKLDGTDGSEIWTTQGGASTSFDSFREVVVESTGDLVAVGISGDVYAISIFVVKLSGIDGIVLWEYSPVTSLTHDVPHSVDVDAQDDVNVVGVYDALNLQGSTAETPVVLKLDGATGDVGWTYEGMATSGDGFYDLAVDLTTGWVVGAGWTEGTWVTGAAQGGYDVAAVLLDGVTGNELGRYQNGTTDDDYLAFAGFDSAGGF 326
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: A0A6H5JLD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD3_9PHAE) HSP 1 Score: 351 bits (900), Expect = 1.400e-108 Identity = 210/425 (49.41%), Postives = 259/425 (60.94%), Query Frame = 1
Query: 4 SVATLEFDEVWRWDGWTSLDDHANDGAVDSDGDVVLVG-SQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDA--VNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGI----WTDTAGADE-FVAIKF 1254
+V F E WR+ GWT+ + A G V DG++VL G S G A D DDT S DF+AVKLDG SGE WTW SSL AD + DS +++++GG T G W +SN D IA VKLDG G E+WRYQ S +S G YG + V+GVAVD D+ LVG TY +LV G G PGD DFF IKLDG G E+W VQGG + + + L KVDS+GDL+A G +EDA +N +VVK G+DG+VLWEY+P ++ + V SVD+D ++ VY+AGG A N QG T VVLKLDG +G W+Y G +SVA D TGWVVGAG G W+ GA+ GG+D+AAVVLDG SG EL R+QDGT DD L FV FD G +GG W G DE VA+KF
Sbjct: 4 TVLRAVFTESWRYAGWTTAQESAAGGVVGGDGNLVLCGKSNGLAFNLD--DDTATSTSSADFSAVKLDGDSGETLWTWVDSSL-QGADWMTSAGADSASNVILGGFTNGEWGTSNLDGLRDIAAVKLDGEAGTEVWRYQAAA--STSSFGG---YGVSYVLGVAVDSTDHPVLVGTTYNNLVDGVGVPGDWDFFAIKLDGMTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAP-SAASGGVFHSVDLDDRNHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSVAADPITGWVVGAGGAQGNWVEGASVGGFDYAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGGFSTAAWVGGTGDDEDVVAMKF 419
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: D8LJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD2_ECTSI) HSP 1 Score: 293 bits (750), Expect = 4.320e-87 Identity = 167/325 (51.38%), Postives = 204/325 (62.77%), Query Frame = 1
Query: 301 IVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDA--VNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGGI----WTDTAGADE-FVAIKF 1254
+++GG T G W +SN D IA VKLDG G E+WRYQ + S S+ YG + V+GVAVD +N LVG TY SLV G G PGD DFF IKLDG G E+W VQGG + + + L KVDS+GDL+A G +EDA +N +VVK G+DG+VLWEY+P T+ + V SVD+D + VY+AGG A N QG T VVLKLDG +G W+Y G +S+A D TGWVVGAG G W+ GA+QGG+DFAAVVLDG SG EL R+QDGT DD L FV FD G +GG W G DE VA+KF
Sbjct: 29 VILGGFTNGEWGASNLDGLRDIAAVKLDGEAGTEVWRYQ-----AAASTSSSGGYGVSYVLGVAVDSTNNPVLVGTTYNSLVDGVGVPGDWDFFAIKLDGVTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSTA-SGGVFHSVDLDDRSHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSIAADPITGWVVGAGGAQGDWVEGASQGGFDFAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGGFSTAAWVGGTGDDEDVVAMKF 347
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: A0A3M1KWY7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1KWY7_9DELT) HSP 1 Score: 97.4 bits (241), Expect = 2.550e-17 Identity = 116/408 (28.43%), Postives = 153/408 (37.50%), Query Frame = 1
Query: 85 VDSDGDVVLVGSQGYAAVEDPLDDTFVDAYSGDFAAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQ-GGESTSFDALQYVKVDSAGDLIAVGI---------------------------------------------GGDE----------DAVNVVVVKFGGTDGAVLWEYSPVTSFT-HDVLESVDVDTQDDVYIAGGYDALNLQGTQAETP---VVLKLDGATGDVVWTYE--GVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVSGDEL 1122
DS GDVV+ G + + P ++ F+ K+ GA+G+ W + G A A D +DIV G + T V KL G TG E+WRY S ++V AVD + G+ E SDF V+KL G+ G+E W G ++ +A V VD AGD+IA GD D N V KF GTDG LW ++ S D SV +D DV AG AET VV+KL G+TG +WT + G+ + +SV VD +G VV AG TGT + +F AV L G SGD L
Sbjct: 115 TDSTGDVVVAGHDIHWILNWPAPGGVIETGRA-FSVTKMSGANGDTLWRYAVDPSGDYGYASSAT-ADGNDDIVASG------ALLQVGTDYDFTVAKLAGATGAEVWRYVLDGTASGADQSNDV----------AVDAFGDVLAAGEV-------ENAGSASDFTVVKLSGSAGTESWRASIDGSASGAEAASTVLVDPAGDVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALAATLDPSGDVVACGVLAESGDPGNFAVAKFSGTDGTELWRWTLAGSAGGSDRCRSVSLDASGDVVAAGSL-------INAETGGDFVVVKLSGSTGGTIWTQQIDGLGHADDEAYSVVVD-GSGDVVAAGTLTGT------ESAEEFTAVKLSGASGDWL 483
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 8.610e-17 Identity = 105/373 (28.15%), Postives = 159/373 (42.63%), Query Frame = 1
Query: 28 EVWRWDGWTSLDDHANDGAVDSDGDVVLVG-SQGYAAVEDPLDDTFVDAYSGDF--AAVKLDGASGEVRWTWTASSLGSEADAFLAVDTDSKNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVK--VDSAGDLIAVGIGGDEDAVNV----VVVKFGGTDGAVLWEYSPVTSFTHDVLESVDVDTQDDVYIAGGYDALNLQGTQAETPVVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGW---VVGAGWTTGTWLTGAAQGGYDFAAVVLDGVS 1110
E W W T+ D+ N + SDG VL G S G + T D AA KLD A G + W W + +AF A + ++ +V G G W + AV LD +G+ +W++Q+ S G +V YG D ++ + G T G+ + + G +DF IKL+ TDGSE+W Q G + +D + V D G ++ GD D N V DG W + T+ + L V V + +AG + G ++ LKL +V W ++G +AG S D+ G ++ AG+T G+W GA G DF AV+L+ ++
Sbjct: 4 EEWYWQAGTAETDYLNAVLMGSDGSSVLAGLSFGL------WNGTNADTSDASLRPAATKLD-ADGNILWKWQ-----HDINAFAAAAGEGRS-VVTAGFASGGWEGTGLGFVDFTAV-SLDADSGELLWKWQDG------SEGFDVIYG-----ATLADEGESVVMAGYTSGN--FSGVNAGSNDFVAIKLNFTDGSEVWRWQDG-TDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTT-EQEWLVGVAVQDDGSILLAG--QQMETTGDESVFFTALKLQADGEEVTWRWQG---GNAGDASRLYDMAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIA 342
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 5.970e-16 Identity = 92/322 (28.57%), Postives = 149/322 (46.27%), Query Frame = 1
Query: 271 LAVDTDSKNDIVMGGR---TEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPP--DSYTSLGSNVYYGYAGVIGVAVDGDDNCFLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESTSFDALQYVKVDSAGDLIAVGIGGDEDAVNVVVVKFGGTDGAVLWEYSPVTSFTHDVLESVD-VDTQDDVYIAGGYDALNLQGTQAETP--VVLKLDGATGDVVWTYEGVATSSAGFHSVAVDLTTGWVVGAGWTTGTWLTGAAQGGY--DFAAVVLDGVSGDELGRYQDGTTDDDSLSFVGFDSVGGLVVGG 1206
L ++ S ++ GR T G W++ N + +AV KLD G+E+W Q DS T++ + G G I +A+D + ++ + G+ F VIKL G DG ++W + ++ + + + VD G ++ G+ D+ + K + G V W + T D L++V + + ++ GG + GT A V +KLD + G VW ++ T+ F V G V AG T G+W + A G + DFAAV+L G E+ R+QDGTT+DD+L G +V+ G
Sbjct: 23 LGPESASSETAILAGRCRFTLGDWAAENAGGSDWVAV-KLDSD-GNELWSIQGGGSGYDSVTAVAT----GEDGSIFLALDVQTSSATSSGSWSNSSTTGGESAAFQFEVIKLSG-DGGQLWQWKDDDTNASRLAEAIAVDQQGGVLVGGLAFDDAGTDFAACKLDSS-GNVTWRWQATT----DGLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDS-GTEVWRWQD-GTAEDDFVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSS-DGKEIWRWQDGTTEDDTLEGAAIQGDGSVVLSG 329 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8748.20221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8748.20221.1 >prot_Ecto-sp13_S_contig8748.20221.1 ID=prot_Ecto-sp13_S_contig8748.20221.1|Name=mRNA_Ecto-sp13_S_contig8748.20221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=693bp MSVATLEFDEVWRWDGWTSLDDHANDGAVDSDGDVVLVGSQGYAAVEDPLback to top mRNA from alignment at Ecto-sp13_S_contig8748:343..4650- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8748.20221.1 ID=mRNA_Ecto-sp13_S_contig8748.20221.1|Name=mRNA_Ecto-sp13_S_contig8748.20221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4308bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8748:343..4650- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8748:343..4650- >mRNA_Ecto-sp13_S_contig8748.20221.1 ID=mRNA_Ecto-sp13_S_contig8748.20221.1|Name=mRNA_Ecto-sp13_S_contig8748.20221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2079bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8748:343..4650- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |