mRNA_Ecto-sp13_S_contig8744.20214.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 250 bits (638), Expect = 2.410e-74 Identity = 132/156 (84.62%), Postives = 132/156 (84.62%), Query Frame = 1
Query: 1 EVPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
EVPEKSKSHVFLEC RARVETKSEWK VLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR
Sbjct: 590 EVPEKSKSHVFLECXXXXXXXXXXXXXXXXXXRARVETKSEWKVFL-ESVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 744
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 6.290e-61 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1
Query: 148 VLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VLLEIRANDWQRAA EAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR
Sbjct: 743 VLLEIRANDWQRAAAEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 849
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.610e-52 Identity = 96/156 (61.54%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 1 EVPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
EVP+KSK+HVFLECARLEE+ G +L +ARVE + EWK VLLE+RA +W RA +A+ AL VH+G GRLWA+LVQL+ Q L+QAL EVPKSGEVWCEGARIHL+P+S FDLE A +YL FA+QFTPQYGDSF+E LR
Sbjct: 982 EVPDKSKAHVFLECARLEEYVGXXXXXXSVLAQARVEARGEWKVFL-ESVLLEMRAGEWVRAIDQARSALSVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLR 1136
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.390e-50 Identity = 90/156 (57.69%), Postives = 117/156 (75.00%), Query Frame = 1
Query: 1 EVPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
+VP+KS++ V LEC+R+EE+ G ++ AR+IL +AR ETK EWK V+LE+R + A EA+ AL++HSG GRLWA+LVQL Q+ ++ALK+VPKSGEVWCEGAR+HL+PLS FDLETA +YL FA+QFTPQYGDSF+E LR
Sbjct: 752 DVPDKSRAQVLLECSRVEEYIGKIDKAREILAKARKETKHEWKVFL-ESVMLEVRCGNRDGALKEAKSALEIHSGTGRLWAILVQLTHAHGPDQQRLVFREALKQVPKSGEVWCEGARVHLHPLSPHFDLETASRYLEFAIQFTPQYGDSFVEALR 906
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S0PWJ1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWJ1_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.270e-48 Identity = 93/155 (60.00%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 4 VPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VPEK K+ V +ECARLEEF G E AR +L +AR E S+WK VLLEIR+ +RA A+ AL++HSG GRLWA LVQL + D AQ +SL+ AL+ VPKSGEVWCEGARIHLNP S FDLE A +L FA +FTPQYGDSF+E L+
Sbjct: 1030 VPEKGKAAVVMECARLEEFVGETEVARAVLRKARSEVGSDWKV-WLESVLLEIRSGKQRRAIDVAKRALEMHSGTGRLWASLVQLHHLEGDTAQCSSLRLALRVVPKSGEVWCEGARIHLNPFSSMFDLEKARSHLHFATKFTPQYGDSFLETLK 1183
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S4MSC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSC1_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.460e-47 Identity = 90/155 (58.06%), Postives = 106/155 (68.39%), Query Frame = 1
Query: 4 VPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VPEK ++ V LECARLEEF G++E AR IL +AR S+WK + LE+R RA AQ AL VHSG GRLWA LVQL+Q D + AQ + LK+AL VPKSGEVWCEG R+HLNP F LE A +L FA +FTPQYGDSF+E LR
Sbjct: 112 VPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKV-WLESIFLEMRCGMRGRAIRLAQNALDVHSGTGRLWAALVQLRQPDGEAAQMSVLKRALWSVPKSGEVWCEGGRLHLNPFFPNFGLEEAELHLDFATKFTPQYGDSFLETLR 265
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S1CM51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM51_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.610e-46 Identity = 88/156 (56.41%), Postives = 107/156 (68.59%), Query Frame = 1
Query: 1 EVPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
EVP KS++ V LE AR +E+ GNL+ AR+ L A + EWK VLLE RA A +A AL+VHSG GRLWAVLVQL++ D D AQ + AL +VPKSGEVWCEGARI L+P S+ FDL +A +L FAVQFTPQYGDSF+E +R
Sbjct: 27 EVPPKSRAQVLLERARADEYEGNLDRARETLRVATDDAGHEWKVFL-EAVLLERRAGRRDAAIAQATRALEVHSGTGRLWAVLVQLRRADGDDAQLKVFRHALMQVPKSGEVWCEGARILLHPKSRHFDLTSARSFLDFAVQFTPQYGDSFIELVR 181
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.220e-45 Identity = 85/156 (54.49%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 4 VPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLK-QRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VPEK K LEC+RLEEF GN++ AR IL ++R+E S+WK VL+E+R + RA A+ AL++H+G GRLWA LVQL+ ++D+ Q A+LK+AL+ VPKSGEVWCEG R++LNP ++ FDL+ A ++L FA +FTPQYGDSF+E LR
Sbjct: 407 VPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKV-WLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEETDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLR 561
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S1YIW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIW7_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.920e-45 Identity = 85/156 (54.49%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 4 VPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLK-QRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VPEK K LEC+RLEEF GN++ AR IL ++R+E S+WK VL+E+R + RA A+ AL++H+G GRLWA LVQL+ ++D+ Q A+LK+AL+ VPKSGEVWCEG R++LNP ++ FDL+ A ++L FA +FTPQYGDSF+E LR
Sbjct: 1267 VPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKV-WLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEETDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLR 1421
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.920e-45 Identity = 90/155 (58.06%), Postives = 106/155 (68.39%), Query Frame = 1
Query: 4 VPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLR 468
VPEK ++ V LECARLEEF G++E AR IL +AR S+WK + LE+R RA AQ AL VHSG GRLWA LVQL+Q D + AQ + LK+AL VPKSGEVWCEG R+HLNP F LE A +L FA +FTPQYGDSF+E LR
Sbjct: 1351 VPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKV-WLESIFLEMRCGMRGRAIRLAQNALDVHSGTGRLWAALVQLRQPDGEAAQMSVLKRALWSVPKSGEVWCEGGRLHLNPFFPNFGLEEAELHLDFATKFTPQYGDSFLETLR 1504 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8744.20214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8744.20214.1 >prot_Ecto-sp13_S_contig8744.20214.1 ID=prot_Ecto-sp13_S_contig8744.20214.1|Name=mRNA_Ecto-sp13_S_contig8744.20214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp EVPEKSKSHVFLECARLEEFTGNLECARQILERARVETKSEWKASCCLFVback to top mRNA from alignment at Ecto-sp13_S_contig8744:713..1882- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8744.20214.1 ID=mRNA_Ecto-sp13_S_contig8744.20214.1|Name=mRNA_Ecto-sp13_S_contig8744.20214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1170bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8744:713..1882- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8744:713..1882- >mRNA_Ecto-sp13_S_contig8744.20214.1 ID=mRNA_Ecto-sp13_S_contig8744.20214.1|Name=mRNA_Ecto-sp13_S_contig8744.20214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8744:713..1882- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |