mRNA_Ecto-sp13_S_contig874.20206.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A6H5L4U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U4_9PHAE) HSP 1 Score: 724 bits (1868), Expect = 1.540e-258 Identity = 357/377 (94.69%), Postives = 365/377 (96.82%), Query Frame = 2
Query: 2 GQSAMEKRVDHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAVVLACITVLCYVVSVYMALYAKKTPWYNLKEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRRLDTALQGWMPS 1132
GQSAMEKRVDHLASRGPVVTLADGNFTRYT+GKSRPYSVVVLFTALG+QYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDI NGGTTFGNLGVNTAPRVFVVPRGTSFPQ RG+ADFEATNTLSR+DG+IDKYLD LGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLA VPSRVMT VRHKGLWFAVSMGCYMTGVGGMIYCIIRN KTHGYHQDGATAMMSPGGRDQFWYEGMVV+VLYLFMSAAILGVYYAASWKRVP PLRTA VLACITVLCYV S+YMALYAKKTPWY LKEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTF KLKMLLWDYLVRRLDTAL+GWMPS
Sbjct: 39 GQSAMEKRVDHLASRGPVVTLADGNFTRYTDGKSRPYSVVVLFTALGSQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIENGGTTFGNLGVNTAPRVFVVPRGTSFPQGRGLADFEATNTLSRADGVIDKYLDTLGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLAAVPSRVMTTVRHKGLWFAVSMGCYMTGVGGMIYCIIRNPKTHGYHQDGATAMMSPGGRDQFWYEGMVVSVLYLFMSAAILGVYYAASWKRVPYPLRTAAVLACITVLCYVASLYMALYAKKTPWYTLKEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFYAKLKMLLWDYLVRRLDTALRGWMPS 415
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: D8LGN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN1_ECTSI) HSP 1 Score: 613 bits (1582), Expect = 1.040e-215 Identity = 320/379 (84.43%), Postives = 331/379 (87.34%), Query Frame = 2
Query: 2 GQSAMEKRVDHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTG-ARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAVVLACITVLCYVVSVYMALYAKKTPWYNLKEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRRLDTALQGWMPSS 1135
GQSA EKRVDHLASRGPVVTLADGNFTRYT GKSRPYSVVVLFTALG+QYKCTACRTVEEPYVKVAEAYSRQY+IREAEHKVVFARIDIGNGG G+ R+F+V R + RG A+ L R DG I+GK VVIVADSSGLLPAALLLG ILGVAAHFLADVPSRVMT VRHKGLWF VS+GCYMTGVGGMIYCIIRN KTHGYHQDGATAMMS GGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTA VLACITVLCYVVSVYMALYAKKTPWYNLKEMIPPV+SEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRRLDTAL+ WMPSS
Sbjct: 15 GQSATEKRVDHLASRGPVVTLADGNFTRYTGGKSRPYSVVVLFTALGSQYKCTACRTVEEPYVKVAEAYSRQYDIREAEHKVVFARIDIGNGGVR----GI----RLFLVVRSCLW---RGSAE-GGRAVLLRGDGAPT----IIGKARAKGGVVIVADSSGLLPAALLLGAILGVAAHFLADVPSRVMTTVRHKGLWFTVSLGCYMTGVGGMIYCIIRNPKTHGYHQDGATAMMSAGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAAVLACITVLCYVVSVYMALYAKKTPWYNLKEMIPPVISEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRRLDTALRAWMPSS 377
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A836CKN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN7_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.050e-63 Identity = 120/353 (33.99%), Postives = 196/353 (55.52%), Query Frame = 2
Query: 104 RPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATA------MMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAVVLACITVLCYVVSVYMALYAKKTPWYNLK---EMIP-PVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRRLDTALQG-WMP 1129
RPY VV+LF A +KC+ C ++ + ++A +Y ++++ + V + ID+ +G + F N+ + +AP +F++P ++P + + + T D + + + TG +V++ D + L A L ++ V AHF+ P+R++ VR K LW VS+ Y GVGG+IYCIIRN + +G G + + S RDQ+W+EG+VVA LYL M+ A G+ A W+R LR V CI VL + + ++ALY K+PWYN +M+P P+ + G +++ G+ R+VRLS +WL+ Y G F K+K+LL DY+VR + A + +MP
Sbjct: 5 RPYHVVILFNAAAPHFKCSQCLVIKPKFAELARSYHLVHDVQNEDRPVFWVTIDVDSGKSAFMNVQLQSAPHIFMLPPDKAYPMGKALPEKLGAGTHVLLASGPDTFAALFTETTGESLVVLRDMTYLQLAVCLAAALVAVLAHFVVLEPTRMLALVRSKALWLMVSLATYTVGVGGLIYCIIRNPQEYGTKPTGINSTGHKVVLFSTNARDQWWWEGIVVAFLYLLMAGATWGITSAVQWRRAHPLLRNLAVCCCIAVLVHCIREFLALYILKSPWYNFSSQVQMLPAPLAALLSTGTIRKSSGIGFRVVRLSAIWLNQYPGLKAFGRKVKVLLVDYVVRTVKEAFRTRYMP 357
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A7S3GSJ4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSJ4_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.720e-41 Identity = 109/371 (29.38%), Postives = 190/371 (51.21%), Query Frame = 2
Query: 2 GQSAMEKRVDHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAE--HKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAV---RHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAVVLACITVLCYVVSVYMALYAKKTPWYNLKEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTFCTKLKMLLWDYLVRR 1099
G + + L PV++L+D NFT++ + R Y +++FTA QY+C C Y +VA Y+RQY+I + +VVF +I++ G FG L + T PR+F +P I+ FE N + +G +I G +TG +V ++ D + P +L + + A F++ + AV + +W VS C+ GV G I+C+I++A +G + G T + + GRDQ+ EG++++ + L + A + A +R P LR +V+ + V + + +Y KT WY+LK+ +PP + ++ +K+ L +RL R+S +WL + + F K + L+ DYLV++
Sbjct: 42 GDTGKIAALSKLLQSTPVISLSDRNFTKFVTERPRDYHAILMFTATSPQYQCGVCVKSLGSYEEVATLYNRQYDISKTPIGDRVVFFKIEVDTGRQIFGELQLETVPRLFFLPPVDVATPKSSISKFEVDNKVLL-EGTSRILAEIHG-ITGVKVEVMVDPA---PLVFVLSIFAALVALFVSAAQGDLYGAVLWYQSTKIWRVVSAICFGVGVSGSIFCVIKSAPLYGMSRKGLT-IFATQGRDQYLLEGIIISFMTLLCAFAAYFLTLATKIRRFPL-LRHLLVILSLAVFVVLGAYIFEVYVSKTGWYHLKDTMPPQLWQWISSAVKKSTTLPKRLWRVSEIWLFESKDWAGFQKKFQALVVDYLVKK 405
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A0B7NIM2_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NIM2_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 5.300e-11 Identity = 77/298 (25.84%), Postives = 132/298 (44.30%), Query Frame = 2
Query: 53 VVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGL-LPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAVV--LACITVLCYVVSVYMALYAKKTPWYNLKEMI 937
V+ L ++ R+TEGK R Y +VVL TAL AQ+ C CR + Y VA+++ R + + + F +D +G + L + +AP VF P PQ G A L+RS + + + L + +G ++ + + L A L L LG AA L + + HK W +S+ +T G ++ IR ++G ++ G Q E +VA +Y ++ +++ + + + R V + CI ++ S +AL+ K Y K +I
Sbjct: 41 VINLNSNSYDRFTEGK-RDYGIVVLLTALDAQFNCAPCREFDPEYSLVAKSFQRN----KKDKDLFFGHLDFKDGQAVYQKLQLMSAPNVFYFP-----PQKAGERKDFAKYDLARSGFSAENFAEFLSRESGYKIHVARPINYFKLGAKLFLA--LGAAAA-LKLLYRHIGFVFYHKNTWAILSILFILTFTSGYMWNRIRTPPFVMPGKNGDINYIASGFSTQLGVEPQIVASIYGLLAFSLIALIKSVPQFNDQTRQRFGVYVWMGCII---FIFSALLALFKIKNGGYPFKLLI 322
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A5C5FYZ3_9BASI (Uncharacterized protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FYZ3_9BASI) HSP 1 Score: 67.4 bits (163), Expect = 1.800e-8 Identity = 71/268 (26.49%), Postives = 119/268 (44.40%), Query Frame = 2
Query: 8 SAMEKRVDHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVV-----PRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLYLFMSAAILGVYY 796
S ++K G +++L+ F T G SR YSV ++ TALG+QYKC C+ ++ Y +A+ +S ++ EH FA +D NG F LG+ TAP + PR TS A + DF T + S I +L K+ D L+ +G L V A L V ++T + +W A+S+ + G ++ IR+ ++G ++ G + Q E +++ LY + ++ + Y
Sbjct: 19 STLDKYRTLSKKSGGLLSLSAQQFDELT-GPSRDYSVSIVLTALGSQYKCHPCQLLQPEYAALAKQWSSAGKGQDEEH--FFAYLDFQNGPEVFQRLGLQTAPTFQLYMPTEGPRKTSKLGAEAV-DFGRTGFKAES---IASHLKAHAKLPSLEYRRPVDKGKLVKTGASIGAGL-VVAWKLWPVLGVILT---RRYIWSAMSLMTILFMTSGYMWTQIRHPLYVQAGRNGQVTYIAGGYQTQLGAEVHIISALYGVLGFSVYALAY 275
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A0K3CCM7_RHOTO (BY PROTMAP: gi|472581659|gb|EMS19382.1| oligosaccharyltransferase complex subunit gamma [Rhodosporidium toruloides NP11] gi|647398378|emb|CDR42237.1| RHTO0S06e11320g1_1 [Rhodosporidium toruloides] n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CCM7_RHOTO) HSP 1 Score: 66.2 bits (160), Expect = 4.350e-8 Identity = 84/307 (27.36%), Postives = 140/307 (45.60%), Query Frame = 2
Query: 35 LASR-GPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVPRGTSFPQARG-----IADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLLGVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLY--LFMSAAILGVYYAASWKRVPSPLRTAVVLACITVLCYVVS-VYMALYAKKTPWYNLK 928
LA R G +++L ++ T R YSV V+ TALGAQYKC C+ ++ Y +A+ +S + EH FA +D NG F LG+ TAP VF + T P+A G DF T + S I +L + + D + +L + V++GV A + P V+ R + +W A+ + + G ++ IR ++G + ++ G + Q E +++ +Y L SA IL A + ++ P+R + + T + V+S V M ++ K P Y +
Sbjct: 28 LAKRNGGLLSLDAASYDELTSSP-RDYSVSVVLTALGAQYKCQPCQLLQPEYTLLAKQWSSTKKSSDEEH--FFAYLDFQNGPEVFQRLGLQTAP-VFQLFMPTEGPRATGKLAAETVDFGRTGFKAES---IASHLSAHANLPSLKFARPVDKTKVLKT--VASVVVGVLAVWRMW-PLFVVVFTR-RYIWSAICIFTILFMTSGYMWTQIRRPLYVQAERNGQVSYIAGGYQTQLGAEVHIISAIYGILGFSAYIL----AYTIPKLTDPVRQRLGVYVWTGVFIVMSGVLMNIFHMKQPGYPFR 319
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A194SEE5_RHOGW (Uncharacterized protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194SEE5_RHOGW) HSP 1 Score: 62.8 bits (151), Expect = 5.870e-7 Identity = 68/245 (27.76%), Postives = 110/245 (44.90%), Query Frame = 2
Query: 47 GPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVV-----PRGTSFPQARGIADFEATNTLSRSDGMIDKYLDILGKVTGARVVIVADSSGLLPAALLL--GVILGVAAHFLADVPSRVMTAVRHKGLWFAVSMGCYMTGVGGMIYCIIRNAKTHGYHQDGATAMMSPGGRDQFWYEGMVVAVLY 760
G +++L+ F T G R YS+ V+ TALGAQYKC C+ ++ Y +A+ ++ +H FA +D NG F LG+ TAP + PR TS A I DF T + S I +L ++ D + ++ + L G+I AA L V ++T + +W A+S+ + G ++ IR+ +DG ++ G + Q E +V+ LY
Sbjct: 32 GGLLSLSTQQFDELT-GPQRDYSLTVVLTALGAQYKCQPCQLLQPEYTALAKQWNSARKGDGEDH--FFAYVDFANGPEVFQRLGLQTAPTFQLYMPTEGPRKTSKLGADAI-DFGRTGFKAES---IASHLRTNARLPSLEYRRPVDKAKVVKTGVYLVGGII---AAWKLWPVLGLILT---RRYIWSALSLLIILFMTSGYMWTQIRHPLYVQAGRDGQVTYIASGYQSQLGAEVHIVSALY 263
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A0K2US58_LEPSM (Magnesium transporter protein 1like [Nasonia vitripennis] (Fragment) n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2US58_LEPSM) HSP 1 Score: 59.7 bits (143), Expect = 5.760e-6 Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 2
Query: 35 LASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAY--SRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAP 316
L+S+ V+ L F Y R YS+VV+FTALGA C C+ + Y VA +Y S+ Y+ K+ FA +D G F + +NTAP
Sbjct: 40 LSSKRAVLRLNGNKFREYVRNAPRNYSMVVMFTALGAGRGCAICKQASDEYQIVANSYRYSQYYS-----DKLFFAMVDFDEGPDAFQIMNLNTAP 130
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Match: A0A811KGR9_9BILA (Magnesium transporter protein 1 n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KGR9_9BILA) HSP 1 Score: 59.3 bits (142), Expect = 8.150e-6 Identity = 36/107 (33.64%), Postives = 54/107 (50.47%), Query Frame = 2
Query: 29 DHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTACRTVEEPYVKVAEAYSRQYNIREAEHKVVFARIDIGNGGTTFGNLGVNTAPRVFVVP-RGTS 346
D L R P + L + + R YS++V+FTALGA ++CT C+ E + VA +Y Y + + FA +D + F L +NTAP ++ P R TS
Sbjct: 34 DSLMKR-PFINLNQEKWRSLVRTQPRNYSMIVMFTALGADFQCTICKPAHEEFSIVANSYRYAYLHSK---NLYFAVVDYADNPQAFQQLNLNTAPVIYYFPARSTS 136 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig874.20206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig874.20206.1 >prot_Ecto-sp13_S_contig874.20206.1 ID=prot_Ecto-sp13_S_contig874.20206.1|Name=mRNA_Ecto-sp13_S_contig874.20206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=375bp MEKRVDHLASRGPVVTLADGNFTRYTEGKSRPYSVVVLFTALGAQYKCTAback to top mRNA from alignment at Ecto-sp13_S_contig874:2911..10082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig874.20206.1 ID=mRNA_Ecto-sp13_S_contig874.20206.1|Name=mRNA_Ecto-sp13_S_contig874.20206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7172bp|location=Sequence derived from alignment at Ecto-sp13_S_contig874:2911..10082+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig874:2911..10082+ >mRNA_Ecto-sp13_S_contig874.20206.1 ID=mRNA_Ecto-sp13_S_contig874.20206.1|Name=mRNA_Ecto-sp13_S_contig874.20206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1125bp|location=Sequence derived from alignment at Ecto-sp13_S_contig874:2911..10082+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |