mRNA_Ecto-sp13_S_contig8721.20185.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI) HSP 1 Score: 318 bits (816), Expect = 1.040e-105 Identity = 165/170 (97.06%), Postives = 168/170 (98.82%), Query Frame = 1
Query: 1 QVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVLVPLRRPLFKSTALRIAASVALVACAVSAVVAASRGRGSCGVRAHGQVA 510
+VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESH SLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLRE+YLAETGNACECVVTSPCDGAGVLVPLRRPLFK+TALRIAASVALVACAVSAVVAASRGRGSCGVRAHG VA
Sbjct: 281 KVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHTSLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREEYLAETGNACECVVTSPCDGAGVLVPLRRPLFKNTALRIAASVALVACAVSAVVAASRGRGSCGVRAHGHVA 450
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: A0A6H5K3S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S4_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.140e-75 Identity = 123/135 (91.11%), Postives = 126/135 (93.33%), Query Frame = 1
Query: 1 QVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEV---------SIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVLVPLR 378
+VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEV SIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAA+ALMTKLRE+YLAETGNACECVVTSPCDGAGVLVPLR
Sbjct: 243 KVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVPYRNLFAKVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAQALMTKLREEYLAETGNACECVVTSPCDGAGVLVPLR 377
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: UPI0009E55A65 (galactokinase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E55A65) HSP 1 Score: 137 bits (346), Expect = 5.800e-36 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 4 VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVL 366
VF+RARHV+ E +RT A+A+ ++DY G M ESH SLRDDYEVS +ELDLLV +A+ DGVYGSRMTGGGFGGCTVTLVK + ++L+ ++E Y GN CVVTSP DGA L
Sbjct: 271 VFRRARHVIGEIQRTTEAAVAIEKEDYEKFGKLMVESHNSLRDDYEVSCEELDLLVKLALEVDGVYGSRMTGGGFGGCTVTLVKRSSVDSLIKHIQEGY----GNKATCVVTSPADGARAL 387
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: K0T9A4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9A4_THAOC) HSP 1 Score: 138 bits (347), Expect = 1.050e-35 Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 4 VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVLVPL 375
+ KRA HVVSE++RT+ A AL D+ G M ESH+S+++DYEVS KE+D LV++A DGVYGSRMTGGGFGGCTVTLVK EAA L+ L+E+Y +TG CEC VTSP G GV+V L
Sbjct: 323 ILKRALHVVSENKRTVDAAAALESGDWKAAGKLMNESHSSMKEDYEVSCKEIDTLVALAQSFDGVYGSRMTGGGFGGCTVTLVKKEAANGLIGYLKEEYK-KTGQECECFVTSPSQG-GVVVDL 444
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: UPI00077A0EEC (galactokinase-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A0EEC) HSP 1 Score: 135 bits (339), Expect = 6.160e-35 Identity = 72/121 (59.50%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 4 VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVL 366
VF+RARHVV E +RT A A+ ++DY G M ESH SLRDDYEVS +ELD+LV +A+ DGVYGSRMTGGGFGGCTVTLVK + E L+ ++E Y N CVVTSP DGA L
Sbjct: 271 VFRRARHVVGEIQRTTEAATAIEKEDYQTFGKLMVESHNSLRDDYEVSCQELDVLVKLALEVDGVYGSRMTGGGFGGCTVTLVKRSSVEPLIKHIQEGY----SNKATCVVTSPADGAKAL 387
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: A0A2B4SUG3_STYPI (Galactokinase n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SUG3_STYPI) HSP 1 Score: 132 bits (333), Expect = 4.410e-34 Identity = 70/121 (57.85%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 4 VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVL 366
VF+RAR V+ E +RT A A+ ++DY G M ESH SLRDDYEVS +ELD+LV +AM DGVYGSRMTGGGFGGCTVT+VK + ++L+ ++E Y GN CVVTSP DGA L
Sbjct: 268 VFRRARQVIGEIQRTTEAAAAIEKEDYEKFGKLMVESHNSLRDDYEVSCEELDVLVKLAMEVDGVYGSRMTGGGFGGCTVTVVKKSSVDSLIKHIQEGY----GNKATCVVTSPADGAKAL 384
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: A0A8J5XL62_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XL62_DIALT) HSP 1 Score: 133 bits (335), Expect = 5.440e-34 Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 7 FKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGA 357
FKRARHV+ ED RTL A RR+D+ G M ESH SLRDDY+VS ELD LV IA DGVYG+RMTGGGFGGCTVTLV+AE A L+ L +Y G A C VT P GA
Sbjct: 287 FKRARHVIGEDARTLDAVEAFRRRDWSSAGRLMVESHQSLRDDYDVSTDELDALVEIATRVDGVYGARMTGGGFGGCTVTLVRAERAAELIATLEAEYERRVGKAPTCFVTKPAHGA 403
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: I2CP88_NANGC (Galactokinase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP88_NANGC) HSP 1 Score: 132 bits (333), Expect = 1.170e-33 Identity = 71/121 (58.68%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 4 VFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVL 366
V++RARHV+SE+ RT ALRR+DY VG MTESHASLRDDYEVS ELD LVS A+ GV GSRMTGGGFGGCTV+LV +A L K++ Y A G E VT P G GV+
Sbjct: 283 VYRRARHVISENARTQAAVAALRRRDYAAVGQAMTESHASLRDDYEVSCSELDFLVSEALKVPGVLGSRMTGGGFGGCTVSLVTKQAVGILEVKIKSAYRARFGVEAETFVTLPSAGCGVV 403
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: A0A7S0BQD9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQD9_9RHOD) HSP 1 Score: 128 bits (322), Expect = 1.280e-33 Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 7 FKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGA 357
++R RHV++ED R L C AL KDY VG MT SHASLRDDYEVSI E+D LV +A GV+GSR+TGGGFGGCTVTLVK E A ALM K+ + Y A+ G +T+P GA
Sbjct: 136 YRRGRHVITEDNRVLECKDALISKDYAKVGTLMTASHASLRDDYEVSIPEIDFLVGLANSFPGVFGSRITGGGFGGCTVTLVKTENANALMEKMSQDYDAKFGVKVSSFITTPGSGA 252
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Match: A0A093C2D7_TAUER (Galactokinase (Fragment) n=2 Tax=Tauraco erythrolophus TaxID=121530 RepID=A0A093C2D7_TAUER) HSP 1 Score: 129 bits (324), Expect = 4.090e-33 Identity = 72/122 (59.02%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 QVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIKELDLLVSIAMGTDGVYGSRMTGGGFGGCTVTLVKAEAAEALMTKLREKYLAETGNACECVVTSPCDGAGVL 366
+V++RARHVVSE RT A AL+ KDYG+ G M ESH SLRDDYEVS ELD LV+ A+ DGVYGSRMTGGGFGGCTVTL+KAEAAE ++EKY +T P GA L
Sbjct: 223 EVYRRARHVVSEIARTARAAQALQDKDYGMFGRLMVESHNSLRDDYEVSCPELDELVAAALEVDGVYGSRMTGGGFGGCTVTLLKAEAAERAQHHIQEKY----SGMATFYLTKPSGGAKAL 340 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8721.20185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8721.20185.1 >prot_Ecto-sp13_S_contig8721.20185.1 ID=prot_Ecto-sp13_S_contig8721.20185.1|Name=mRNA_Ecto-sp13_S_contig8721.20185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp QVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEVSIback to top mRNA from alignment at Ecto-sp13_S_contig8721:2223..6510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8721.20185.1 ID=mRNA_Ecto-sp13_S_contig8721.20185.1|Name=mRNA_Ecto-sp13_S_contig8721.20185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8721:2223..6510+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8721:2223..6510+ >mRNA_Ecto-sp13_S_contig8721.20185.1 ID=mRNA_Ecto-sp13_S_contig8721.20185.1|Name=mRNA_Ecto-sp13_S_contig8721.20185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=513bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8721:2223..6510+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |