mRNA_Ecto-sp13_S_contig87132.20180.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: D8LCB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCB5_ECTSI) HSP 1 Score: 148 bits (374), Expect = 3.310e-42 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRPAVTKYQQLNPPPVVPEGFE+WSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP
Sbjct: 123 GPRPAVTKYQQLNPPPVVPEGFENWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 193
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A804JJZ2_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JJZ2_MUSAM) HSP 1 Score: 98.6 bits (244), Expect = 6.330e-23 Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRPA T++Q+LN PV+PEGF W MD+WG+KMI A+E V+ + AIG GLD++A ++LM +GPHLLAP
Sbjct: 139 GPRPANTRFQELNSEPVIPEGFPEWKETMDSWGSKMIAAIEVVAEMAAIGFGLDKDAFTSLMKQGPHLLAP 209
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: UPI00125E54C4 (uncharacterized protein LOC116029409 isoform X2 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E54C4) HSP 1 Score: 97.4 bits (241), Expect = 8.990e-23 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRPAVT++++LN PV+PEGF W MD+WG+KMI A+ETV+ + IG GL ++A ++LM +GPHLLAP
Sbjct: 137 GPRPAVTRFKELNSEPVIPEGFPEWKDTMDSWGHKMISAIETVAEMAGIGFGLPKDAFTSLMKQGPHLLAP 207
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A3S4N4L9_9MAGN (Flavonol synthase/flavanone 3-hydroxylase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4N4L9_9MAGN) HSP 1 Score: 96.7 bits (239), Expect = 3.240e-22 Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP T++Q+LN PVVPEGF W MD+WGNKMI A+E V+ + AIG GL ++A ++LM +GPHLLAP
Sbjct: 138 GPRPTNTRFQELNSEPVVPEGFPEWKETMDSWGNKMIAAIEVVAEMAAIGYGLPKDAFTSLMQQGPHLLAP 208
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A1Q3D039_CEPFO (Uncharacterized protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D039_CEPFO) HSP 1 Score: 96.3 bits (238), Expect = 4.180e-22 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP+ T++Q+LN PV+PEGF WS MD+WG+KMI A+E V+ + AIG GL ++A ++LM +GPHLLAP
Sbjct: 130 GPRPSNTRFQELNSEPVIPEGFPKWSETMDSWGHKMISAIEAVAEMAAIGFGLPKDAFTSLMKQGPHLLAP 200
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A5N6P391_9ASTR (Uncharacterized protein n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A5N6P391_9ASTR) HSP 1 Score: 95.1 bits (235), Expect = 5.320e-22 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP TK+Q+LN PV+PEGF W MD WG+KM+ A+E V+ + AIG GL +A ++LM +GPHLLAP
Sbjct: 73 GPRPLTTKFQELNSEPVIPEGFPEWKETMDGWGSKMVSAIEAVAEMAAIGFGLPNDAFTSLMKQGPHLLAP 143
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A1Y1HUE2_KLENI (2OG-FeII_Oxy domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUE2_KLENI) HSP 1 Score: 96.3 bits (238), Expect = 5.330e-22 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP T++Q+LN PV+P GF W+ +M+ WG KMI A+E V+ + AIG GL+ +AI+ LMH+GPHLLAP
Sbjct: 138 GPRPGKTRFQELNAEPVIPPGFPEWADVMNTWGRKMIAAVEVVAEMLAIGFGLERDAITNLMHQGPHLLAP 208
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: M5X3E7_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5X3E7_PRUPE) HSP 1 Score: 94.4 bits (233), Expect = 6.280e-22 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP+ T++Q+LN PVVPEGF W MD+WG KMI A+E V+ + AIG GL ++A ++LM +GPHLLAP
Sbjct: 125 GPRPSETRFQELNAEPVVPEGFPEWKDTMDSWGYKMISAIEAVAEMAAIGFGLPKDAFTSLMKQGPHLLAP 195
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A251Q927_PRUPE (Uncharacterized protein n=2 Tax=Prunus TaxID=3754 RepID=A0A251Q927_PRUPE) HSP 1 Score: 94.4 bits (233), Expect = 7.850e-22 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP+ T++Q+LN PVVPEGF W MD+WG KMI A+E V+ + AIG GL ++A ++LM +GPHLLAP
Sbjct: 55 GPRPSETRFQELNAEPVVPEGFPEWKDTMDSWGYKMISAIEAVAEMAAIGFGLPKDAFTSLMKQGPHLLAP 125
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Match: A0A067GXR0_CITSI (Uncharacterized protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067GXR0_CITSI) HSP 1 Score: 93.6 bits (231), Expect = 1.220e-21 Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 1 GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAP 213
GPRP+ T++Q+LN PV+P+GF W MD+WG+KMI A+E V+ + AIG GL ++A ++LM +GPHLLAP
Sbjct: 130 GPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAP 200 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87132.20180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig87132.20180.1 >prot_Ecto-sp13_S_contig87132.20180.1 ID=prot_Ecto-sp13_S_contig87132.20180.1|Name=mRNA_Ecto-sp13_S_contig87132.20180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp GPRPAVTKYQQLNPPPVVPEGFESWSTIMDAWGNKMIGALETVSRLCAIGback to top mRNA from alignment at Ecto-sp13_S_contig87132:1..567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig87132.20180.1 ID=mRNA_Ecto-sp13_S_contig87132.20180.1|Name=mRNA_Ecto-sp13_S_contig87132.20180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig87132:1..567- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig87132:1..567- >mRNA_Ecto-sp13_S_contig87132.20180.1 ID=mRNA_Ecto-sp13_S_contig87132.20180.1|Name=mRNA_Ecto-sp13_S_contig87132.20180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig87132:1..567- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |