mRNA_Ecto-sp13_S_contig8712.20178.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: D7FQS4_ECTSI (Peroxisomal membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI) HSP 1 Score: 693 bits (1788), Expect = 7.420e-242 Identity = 419/501 (83.63%), Postives = 426/501 (85.03%), Query Frame = 1
Query: 319 VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPRSPGAAIPGAADVAAGVTAAGADGPLAASVTAVADATAEAEMAAP-------ARITPPRRSPGVSGATLTTEEDGNSPRFAAGMGGREGASGEPGRISSDDGDVSEASPRLTSSLSEPARPSSISRAPADDHPAMMAGTKTAAVGVALGQPELAPEAAGAARASEXXXXXXXXXXXXXXXXXXXXXXXXXXLQRSGSVVVQEDSFIEFVDVPLVTPTGEVLVEALSFKV 1800
VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMA+L+SNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQ EIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVP SPGAAI ARITPPRR+PGVSG L TEEDGNSP +AA GGREGASGEPGRI ++DGDVS PRLTSSLSEPARPSSISRAPAD HPAMMAGTK +AVGVALGQPEL PEA XXXXXXXXXXXXXXXXXXXX LQRSGSVVVQEDS IEFVDVPLVTPTGEVLVEALSFKV
Sbjct: 19 VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMAELFSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQ-EIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPNSPGAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARITPPRRNPGVSGVNLATEEDGNSPSWAADEGGREGASGEPGRIGNEDGDVSGTIPRLTSSLSEPARPSSISRAPADGHPAMMAGTKASAVGVALGQPELEPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGAPPLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLVEALSFKV 518
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A835Z212_9STRA (ATP-binding cassette sub-family D member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z212_9STRA) HSP 1 Score: 410 bits (1054), Expect = 1.880e-132 Identity = 212/343 (61.81%), Postives = 267/343 (77.84%), Query Frame = 1
Query: 115 MVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPRSP 1143
MVPG S EAG L VAGLLL RT LD+ ML LTTT+E AIV+R F RG+ F + VP+++VNS+LKY QSE++LRFRQRLT H+M +YM GFT+Y V+NLD R+ N DQAITQDVE FA SMADL+SN+TKP+LD+ +YVRRL+ +VD +AP ++IAYLL SGVAL+A+RKPT +YTALV QEG YR+VN RL+T+A+ EIAFY GN KEK VL F LV++ RRS++FR+S+ +DS+ AKY AS+VGW VSRPF+N PR ++ + +YQ+YHS+GRMML L+ ALGRLVLSGREL RLSGFS+RVT L+DVI+D +G + R QV SP
Sbjct: 1 MVPGVLSPEAGFLAGVAGLLLLRTYLDITMLELTTTVERAIVQRDAGSFGRGVRTFAKFMVPLSIVNSLLKYGQSEVALRFRQRLTAHIMDRYMAGFTYYGVTNLDGRLKNVDQAITQDVELFAESMADLFSNVTKPMLDICLYVRRLARRVDPLAPYSLIAYLLASGVALTAMRKPTGLYTALVQHQEGVYRHVNGRLITHAE-EIAFYGGNKKEKAVLSAAFADLVALVRRSQQFRYSMAVVDSIAAKYLASVVGWLTVSRPFLNLKDPRFKDASPSVLYQEYHSAGRMMLNLSQALGRLVLSGRELTRLSGFSARVTSLLDVIEDVAQGSYHRTQVRASP 342
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A2D4CER2_PYTIN (Long chain acyl-CoA transporter ABC transporter n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CER2_PYTIN) HSP 1 Score: 363 bits (933), Expect = 8.290e-114 Identity = 184/358 (51.40%), Postives = 266/358 (74.30%), Query Frame = 1
Query: 70 VDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPRSP 1143
V+ FLRR RL KV+VPG + E G + VA LL ARTS D+ +L + T+IE AI+ RS +GF + RF+ + +P+A VNS+LKY Q+EL+LRFR RLT H+ Y++GF +Y VSNLD+RI NADQ +T DVERF+ S+A+LYSN++KP+LD+ IY +L+ + PATM+AYL+ SG L+ LR+PT +T + EG +R++NSRL+T+++ EIAFY GN +EK +L+ F +L+S+ R+S++FR S+ +DS+VAKYFA++VG+ VVS+PF++ DHPRH ST AE +DY SG+M++KL+ A+GRLVLSGREL RL+GF++RVT +++V+ D +RG ++R + P
Sbjct: 57 VNQEFLRRFLRLFKVIVPGVFTPEVGYALLVALLLAARTSFDIQILQIMTSIERAIISRSTDGFLLHLRRFLLVMLPVACVNSLLKYGQTELTLRFRDRLTRHLYDLYLKGFVYYKVSNLDNRIGNADQLLTVDVERFSHSVAELYSNVSKPLLDIAIYAVKLTSSIGFQGPATMLAYLVASGACLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSE-EIAFYNGNVREKHILDESFSRLISLLRQSQQFRFSVAVIDSIVAKYFATVVGFLVVSKPFLDLDHPRHRTSTYAERMEDYFRSGKMLVKLSEAMGRLVLSGRELTRLAGFTARVTEMLEVLGDLDRGTYQRTMLASEP 413
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A8K1FFC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFC8_PYTOL) HSP 1 Score: 357 bits (917), Expect = 1.500e-111 Identity = 176/351 (50.14%), Postives = 263/351 (74.93%), Query Frame = 1
Query: 70 VDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKR 1122
++ FL R RL KV+VPG + E G VAGLL ARTS D+++L + T+IE AI+ RS EGF + RF + +P++ VN +LKY Q+EL+LRFR RLT H+ Y++GF +Y VSNLD+RI+NADQ +T DVERF+ S++DLYSN++KP+LD+ IY L+ + PATM+ YL+ SG+ L+ LR+PT +T + EG +R++N+RL+T+++ EIAFY GN +EK++L+ F +L+ + R+S++FR S+ +D++VAKYFA++VG+ VVSRPF++++HPRH +S+ AE +DY SG+M++KL+ A+GRLVLSGREL RL+GF++RVT ++DV+ D + G ++R
Sbjct: 57 INKEFLTRFMRLFKVIVPGLVTPEVGYAFLVAGLLAARTSFDILILQIVTSIERAIISRSTEGFMHHLRRFFLVMLPVSCVNCLLKYGQTELTLRFRNRLTRHLYDLYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVSDLYSNVSKPLLDICIYAVELTSSIGFQGPATMLGYLVFSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNARLITHSE-EIAFYNGNVREKRILDQSFTRLIDLVRQSQQFRFSISVIDNIVAKYFATVVGYFVVSRPFLDKEHPRHLNSSYAERMEDYFRSGKMLIKLSEAMGRLVLSGRELTRLAGFTARVTEMMDVLTDLDEGRYQR 406
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A5D6XLN4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN4_9STRA) HSP 1 Score: 353 bits (905), Expect = 1.000e-109 Identity = 177/351 (50.43%), Postives = 261/351 (74.36%), Query Frame = 1
Query: 70 VDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKR 1122
V+ F R +L KV+VPGP + E VA LL ARTS D+++L + T+IE AI+ RS E F R + RF + +P++ VN +LKY +EL+LRFR RLT+H+ Y++GF +Y VSNLD+RI+NADQ +T DVERF+ S+ADLYSN++KP+LD++IY +L+ + A PATM+AYL++SG+ L+ LR+PT +T + EG +R++NSRL+T+++ EIAFY GN +EK++L+ F +L+ + R+S++FR S+ +D++VAKY A++VG+ VVS+PF++ PRH ST AE +DY SG+M++KLA A+GRLVLSGREL RL+GF++RVT +IDV+ D + G ++R
Sbjct: 57 VNKEFYLRFVKLFKVIVPGPFTAEVAFAALVAALLAARTSFDIMVLQIITSIERAIISRSTEDFTRHLRRFFVLMLPMSCVNCLLKYGHTELTLRFRNRLTKHLYKHYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNLSKPMLDIVIYSAKLTSSIGAQGPATMLAYLVVSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHSE-EIAFYNGNVREKKILDESFARLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSKPFLDMSDPRHLKSTYAERMEDYFRSGKMLIKLAEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDEGRYQR 406
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A0D2UCF6_CAPO3 (ATP-binding cassette n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCF6_CAPO3) HSP 1 Score: 351 bits (901), Expect = 4.040e-109 Identity = 177/354 (50.00%), Postives = 255/354 (72.03%), Query Frame = 1
Query: 70 VDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQV 1131
VD F R+ +LL++++PG + E G +V VA ++ RT D+ M+ TT IE I+ R GF+ G+ F +PI+ V ++LKY +EL+LRFR RLT H+ S+Y+ GFT+Y +SNLD+RIANADQ +TQD+E+F S+ADLYSN++KP+LD+ IY R+L+ + A PA M+AYL +SG L+ LR+PT YT + EGE+R+VNSRL+TNA+ EIAFY GN KEK V+ F++LV++ RRS +FR +G +DS VAKYFA+++G+TVVSRPF++ R + +E+ +DY+ SGRM++ LA A+GRLVL+GREL RL+GF++R+T L++V+ D N +KR V
Sbjct: 61 VDGVFFARLRKLLRIVIPGVFTPEMGFIVLVAAAMVGRTYCDLWMIKTTTAIESTIISRDAAGFREGLVHFFNALLPISCVTNLLKYGLNELALRFRTRLTNHLYSEYLRGFTYYKISNLDNRIANADQLLTQDLEKFCDSIADLYSNVSKPILDIFIYARKLAGSIGAQGPAYMLAYLAVSGAFLTRLRRPTGWYTVNEQRLEGEFRFVNSRLITNAE-EIAFYNGNEKEKLVITQTFNRLVNMLRRSMQFRFGMGVIDSFVAKYFATIIGFTVVSRPFMDPTSERFKGMSHSEMMEDYYKSGRMLINLATAVGRLVLAGRELTRLAGFTTRMTDLMEVLHDLNHDRYKRTMV 413
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: H3GA94_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA94_PHYRM) HSP 1 Score: 350 bits (897), Expect = 4.310e-109 Identity = 179/361 (49.58%), Postives = 266/361 (73.68%), Query Frame = 1
Query: 46 KRPASRPKV--DAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKR 1122
K+ SR KV + F RR RL KV++PGP + E G VA +L+ARTS D+V+L+ T IE AI+ RS+ F R + RFV + +P++ VNS+LKY +ELSLRFR RLT H+ +Y++GF +Y VSNLD+RI+NADQ +T DVERF+ S+ADLYSN++KP+LD+ IY +LS + P M++YL+ SG L+ LR+PT+ +T Q EG +R++NSRL+T+++ EIAFY GN +EK++L+ F +L+ + R S++FR S+ +D++VAKY A++VG++V+S+PF++ + R H+T AE +DY SG+M+LK++ A+GRLVLSGREL RL+GF++RVT +IDV+ D ++G ++R
Sbjct: 3 KKHGSRQKVAVNKEFYRRFLRLFKVIIPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAIERAIISRSQTEFLRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAVKLSSTIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSE-EIAFYNGNVREKRILDQSFSRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYSVLSKPFLDMSNKRLEHTTYAERMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDQGKYQR 362
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A668RUJ0_OREAU (ATP-binding cassette, sub-family D (ALD), member 3a n=32 Tax=Ovalentaria TaxID=1489908 RepID=A0A668RUJ0_OREAU) HSP 1 Score: 350 bits (898), Expect = 5.440e-109 Identity = 177/357 (49.58%), Postives = 259/357 (72.55%), Query Frame = 1
Query: 61 RPKVDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQV 1131
R VD F RI R+L+V+VP +EAG L+ +A +L+ART DV M+ T IE AI+ RS + FK + +F+ I++VN+ LK+ +EL LRFR+RLT H+ ++Y++G+T+Y + NLD+R+ANADQ +TQDVE+F S+ DLYSN++KP+LD+ +Y+ +L+ + A PATM+ YLL+SG+ L+ LR+P T + EGEYRYVNSRL+TN++ EIAFY GN +EKQ + +F KLV+ FR S+G +DS++AKY A++VG+ VVSRPF+N HPRH HST +E+ +DY+ SGRM+L+++ ALGR+VL+GRE++RLSGF++R+ L+ V+ D N G ++R V
Sbjct: 41 RAAVDKVFFLRILRILRVLVPRVFCMEAGYLIFIAAMLVARTYCDVWMIQNGTMIESAIIGRSTKDFKICLLKFIEFMPIISLVNNFLKFGLNELKLRFRERLTHHLYNQYLQGYTYYKMGNLDNRVANADQLLTQDVEKFCNSVVDLYSNVSKPLLDIGLYIFKLTSAIGAQGPATMMVYLLISGLFLTRLRRPVGKMTVTEQRYEGEYRYVNSRLITNSE-EIAFYNGNKREKQTIHSIFQKLVNHLHDFIFFRFSMGVVDSIIAKYLATVVGYLVVSRPFLNLSHPRHTHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMSRLSGFTARIVELMKVLKDLNAGKYERTMV 396
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A662XR71_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XR71_9STRA) HSP 1 Score: 349 bits (895), Expect = 1.320e-108 Identity = 175/347 (50.43%), Postives = 259/347 (74.64%), Query Frame = 1
Query: 82 FLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKR 1122
F R RL KV+VPGP + E G VA +L+ARTS D+V+L+ T +E AI+ RS++ F M RFV + +P++ VNS+LKY +ELSLRFR RLT+H+ ++Y++GF +Y VSNLD+RI+NADQ +T DVERF+ S+ADLYSN++KPVLD+ +Y +L+ + P M+ YL+ SG L+ LR+PT+ +T Q EG +R++NSRL+T+++ EIAFY GN +EK++L+ F++L+ + R+S++FR S+ +D++VAKY A+ VG+ V+SRPF++ +PR HST AE +DY SG+M+LK++ A+GRLVLSGREL RL+GF++RVT +IDV+ D + G ++R
Sbjct: 41 FYHRFLRLFKVIVPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAVERAIISRSQKDFMHHMRRFVAVMLPMSCVNSMLKYGHTELSLRFRTRLTKHLYAQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPVLDISLYSFKLAASIGVEGPVIMLGYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHSE-EIAFYNGNVREKRILDESFNRLIDLVRKSQQFRFSVSVIDNIVAKYLATCVGYAVLSRPFLDMSNPRLEHSTYAERMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARVTEMIDVLTDLDEGKYQR 386
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Match: A0A6G1QLK0_9TELE (ATP-binding cassette sub-family D member 3 68 kDa peroxisomal membrane protein n=3 Tax=Anabantiformes TaxID=1489900 RepID=A0A6G1QLK0_9TELE) HSP 1 Score: 348 bits (894), Expect = 3.370e-108 Identity = 183/367 (49.86%), Postives = 261/367 (71.12%), Query Frame = 1
Query: 31 EQRGRKRPASRPKVDAAFLRRISRLLKVMVPGPCSVEAGCLVAVAGLLLARTSLDVVMLNLTTTIEHAIVERSKEGFKRGMSRFVRMCVPIAVVNSVLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMADLYSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNAQAEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQV 1131
E+ GRK R VD F RI R+L++MVP +E GCL+ +A +L+ART DV M+ T IE AI+ RS + FK + F++ IA+VN+ LK +EL LRFR+RLT+ + +Y+EGFT+Y + NLD+RIANADQ +TQDVE+F S+ DLYSN++KP+LD+ +Y+ +L+ + A PA M+AYLL+SG+ L+ LR+P T + EGEYRY+NSRL+TN++ EIAFY GNT+EKQ + +F KLV FR S+G +DS++AKY A++VG+ VVSRPF+N HPRH ST +E+ +DY+ SGRM+L+++ ALGR+VL+GRE+ RLSGF++R+T L+ V+ + N G ++R V
Sbjct: 49 EKDGRK---DRAAVDKVFFLRIIRILRLMVPRVFCMETGCLILIAAMLVARTYCDVWMIQNGTMIESAIIGRSTKDFKTFLFSFIKFMPIIALVNNFLKLGLNELKLRFRERLTKSLYDQYLEGFTYYKMGNLDNRIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTTAIGAQGPAIMMAYLLISGLFLTRLRRPIGKMTVTEQRYEGEYRYINSRLITNSE-EIAFYNGNTREKQTIHAIFKKLVDHLHNFIFFRFSMGFVDSIIAKYIATVVGYLVVSRPFLNLSHPRHLQSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLSGFTARITELMKVLKELNAGKYERTMV 411 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8712.20178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8712.20178.1 >prot_Ecto-sp13_S_contig8712.20178.1 ID=prot_Ecto-sp13_S_contig8712.20178.1|Name=mRNA_Ecto-sp13_S_contig8712.20178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=607bp EGTSSSTGSSEQRGRKRPASRPKVDAAFLRRISRLLKVMVPGPCSVEAGCback to top mRNA from alignment at Ecto-sp13_S_contig8712:1..5665+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8712.20178.1 ID=mRNA_Ecto-sp13_S_contig8712.20178.1|Name=mRNA_Ecto-sp13_S_contig8712.20178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5665bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8712:1..5665+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8712:1..5665+ >mRNA_Ecto-sp13_S_contig8712.20178.1 ID=mRNA_Ecto-sp13_S_contig8712.20178.1|Name=mRNA_Ecto-sp13_S_contig8712.20178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1821bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8712:1..5665+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |