mRNA_Ecto-sp13_S_contig8709.20175.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: D7FI44_ECTSI (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI44_ECTSI) HSP 1 Score: 597 bits (1540), Expect = 8.780e-206 Identity = 392/399 (98.25%), Postives = 394/399 (98.75%), Query Frame = 1
Query: 61 MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAGQLESEGILTSSKLTESNITSFQTKLKVPGKSEAEVKSALMAMVSNKKGVPADQEEDDDPLFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR 1257
MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAGQLESEGILTSSKLTESNITSFQTKLKVPGKSEAEVKSALMAMVSNKKGVPADQEEDDDPL GS+DTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSS TE TGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALD A+EVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR
Sbjct: 113 MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAGQLESEGILTSSKLTESNITSFQTKLKVPGKSEAEVKSALMAMVSNKKGVPADQEEDDDPLCGSFDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSGTEEGTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDHALEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR 511
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: A0A6H5JKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKM5_9PHAE) HSP 1 Score: 585 bits (1507), Expect = 1.050e-200 Identity = 385/399 (96.49%), Postives = 390/399 (97.74%), Query Frame = 1
Query: 61 MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAGQLESEGILTSSKLTESNITSFQTKLKVPGKSEAEVKSALMAMVSNKKGVPADQEEDDDPLFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR 1257
MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAA QLESEGILTSSKLTES+ITSFQTKLKVPGK+EA+VKSALMAMVSNKKGVPADQ EDDD LFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSS TSWGVSASVSSFGGAASASVSADSSETE TGEAKGSNAFSAN+KTTTTSA+TVETI CPMKSFRIPVSTMTMTEEALD AMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR
Sbjct: 1 MTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAEQLESEGILTSSKLTESSITSFQTKLKVPGKTEADVKSALMAMVSNKKGVPADQGEDDDLLFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSCTSWGVSASVSSFGGAASASVSADSSETEGGTGEAKGSNAFSANSKTTTTSASTVETIICPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR 399
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: D7FI45_ECTSI (MACPF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI45_ECTSI) HSP 1 Score: 437 bits (1124), Expect = 4.030e-141 Identity = 279/410 (68.05%), Postives = 294/410 (71.71%), Query Frame = 1
Query: 55 AGMTAVLPPVVRKPPALSRGEVAVLEALYAVGSDAPPIRKQALDFGLGLDAAGQLESEGILTSSKLTESNITSFQTKLKVPGKSEAEVKSALMAMVSNKK-----GVPADQEEDDDPLFGSYDTNEELVAAAGG----GMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVVKFHATAGHSESESEDSRAMFHSFVR 1257
A M A +P VVR PPALS+GEV VLE LYA G+ APPIRKQAL+FGLGLDAAGQLE EGILTS+ LTES+I+SFQ +LKVPGKSEA VKS LMAM SNK P DQ+ GMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWG S SVSSFGGA V D +E+ K SNAFSANNK TTTSAT VETITCPMKSFRIPVSTMTMTEEALD AMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMT XXXXXXXXX SSGVVKFH+TAG +ESESEDSRAMF ++VR
Sbjct: 300 AAMAAAMP-VVRTPPALSKGEVRVLETLYASGASAPPIRKQALEFGLGLDAAGQLEDEGILTSASLTESSISSFQARLKVPGKSEAGVKSTLMAMASNKSQRAKSSAPGDQKXXXXXXXXXXXXXXXXXXXXXXXXXXGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGASTSVSSFGGA----VGDDKNES-------KTSNAFSANNKKTTTSATMVETITCPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTMTTESEVDTSTLLSAASTQMQESRTESNDTGVSGSGPAVXXXXXXXXXMKSASSSGVVKFHSTAGKNESESEDSRAMFQTYVR 697
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: D7FTW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW7_ECTSI) HSP 1 Score: 163 bits (412), Expect = 4.880e-40 Identity = 102/205 (49.76%), Postives = 132/205 (64.39%), Query Frame = 1
Query: 397 GSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSS-FGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMT 1008
GSY +NEELVA A GG ALYG+NFFP +D+ KPY PIL P++VEM GA + F A V +T S S F +E G S+A +TS G S S ++ F G S +A S ET + E K + N TT+SAT +E I CPMKSFRIP++ M ++E+A +A+EVD++ A +FLD FGSHVSNGR LGGIF+ T+T
Sbjct: 503 GSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEMTGAVSDFTARVWQTTSMSKVSAFHNISETSGDSMATKIATSEGSSRSNATWFTGKTKGSGNATSGETTEASEEEK---SLQRANSQTTSSATVIEYIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGRQELGGIFYSTLT 704
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: A0A6H5JEU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.630e-17 Identity = 63/192 (32.81%), Postives = 81/192 (42.19%), Query Frame = 1
Query: 397 GSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGR 972
GSY +NEELVA A GG ALYG+NFFP +D+ KPY PIL P++VEM H T+ + I CPMKSFRIP++ M ++E+A +A+EVD++ A +FLD FGSHVSNGR
Sbjct: 378 GSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEM------------HDTQG---------------------------------------------------------------------------MRDIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGR 482
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: A0A1V9Y600_9STRA (VLIG-type G domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y600_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.920e-12 Identity = 72/198 (36.36%), Postives = 100/198 (50.51%), Query Frame = 1
Query: 409 TNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRT 1002
++E++VA A GG ALYGVN +E +T + PIL++P + G + T S ASNF + ++ G S A S+G FG +A S S AKG + T TTSA V P+KSFR ++M ++EEA+ +A +V A FLD FGSHVS G + LGGIF++T
Sbjct: 77 SDEQVVARASGGAALYGVNLGMSEVHLTQRAPRPILQQPETCSLNGPILGSTVMEMTFTSISAASNFRSSVKSCGNSFAIDIHGSFGF------FGASAGYSRGRQS---------AKGGKS---EETTKTTSAAHVRYAFEPVKSFRFAQTSMRLSEEAITAARDVTNEEAADYFLDDFGSHVSCGDYHLGGIFWKT 256
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Match: UPI000A2A475A (uncharacterized protein LOC110231404 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A475A) HSP 1 Score: 64.3 bits (155), Expect = 2.340e-7 Identity = 67/211 (31.75%), Postives = 94/211 (44.55%), Query Frame = 1
Query: 400 SYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSETEARTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDSAMEVDT------LLKAG--QFLDTFGSHVSNGRHLLGGIFFRTMT 1008
SYD+ EE+VA A GG+AL G+ F E T PILK P VE + +E +E A F+K E+ G + A V +F AAS + +S+ + KTTTTS + MKSF +P S + TE+A + A+ + ++K +F +GSHV G H LGG+FF T
Sbjct: 286 SYDSVEEIVANASGGLALKGIYFSKWEKPQTSN--VPILKPPQKVESWNTQSPYETGFRQFSEGHSAEMFSKEVESSGFTHADV------VCGFCLTFAAAASGTYGTQTSDESEMSV------------KTTTTSVSATNFCRSAMKSFAVPRSCLHPTEQACNMALSITERADDKKIMKEEIRRFFKIYGSHVPYGVHQLGGLFFTMST 476 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8709.20175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8709.20175.1 >prot_Ecto-sp13_S_contig8709.20175.1 ID=prot_Ecto-sp13_S_contig8709.20175.1|Name=mRNA_Ecto-sp13_S_contig8709.20175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp QKTKNGKTPATAAEAAAAAGMTAVLPPVVRKPPALSRGEVAVLEALYAVGback to top mRNA from alignment at Ecto-sp13_S_contig8709:619..6011+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8709.20175.1 ID=mRNA_Ecto-sp13_S_contig8709.20175.1|Name=mRNA_Ecto-sp13_S_contig8709.20175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8709:619..6011+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8709:619..6011+ >mRNA_Ecto-sp13_S_contig8709.20175.1 ID=mRNA_Ecto-sp13_S_contig8709.20175.1|Name=mRNA_Ecto-sp13_S_contig8709.20175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1257bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8709:619..6011+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |