mRNA_Ecto-sp13_S_contig8704.20168.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D7FMR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR8_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 7.280e-171 Identity = 244/292 (83.56%), Postives = 259/292 (88.70%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLING 876
SHIRGAMVSMMT ATASRRH PC++PAPG IGTGDG GT LG TQLPMDPSTCIFWC VALGALVKG+PLESVA+YFR A VSLDS TGPANPE+A+AWTILGYLYGFMGDM+KFEEYLGFAD+F TASINEGSADTLPAGFAEIVH KDTVK+CSDNLDPADMESFCARHRDAP+ IC+AVND ELYRY+TQSFKVFQQV Y+KA SASRRRLSDD+CRAEGGEGVSAK GPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGL+ING
Sbjct: 6 SHIRGAMVSMMTRATASRRHHSPCETPAPGRLDAIGTGDGIGTFLGGTQLPMDPSTCIFWCAVALGALVKGNPLESVASYFRWARVSLDSYTGPANPEVAKAWTILGYLYGFMGDMAKFEEYLGFADSFLTASINEGSADTLPAGFAEIVHRKDTVKVCSDNLDPADMESFCARHRDAPR----------ICEAVNDGELYRYVTQSFKVFQQVAYAKACAKSASRRRLSDDQCRAEGGEGVSAKDCGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLIING 287
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.070e-75 Identity = 143/293 (48.81%), Postives = 184/293 (62.80%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPY-GIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDK-CRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLIN 873
SHIRG MV MMT +TA + DSP C + I T DG + +QL PS C FWC V +GALV GSP+E V NY LA +L++ TGP N E+A+AW ILGY YGFMGD + F+EYLG +D+F T SI GS D LPAGFAEI+ HK TVK+ + NLD A ++ AR RD PQ A +++++RY+TQS F+Q+V+ K SA+ R LSDD+ C +GG G S N P ++V DAM TGLR +I+F+ L+E +R IR G+GGLLIN
Sbjct: 134 SHIRGEMVRMMTLSTAPHQLGASYDSPEQ-CQFDAILTEDG---ITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANP----------AATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCG-SPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLIN 411
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 249 bits (637), Expect = 6.760e-75 Identity = 141/291 (48.45%), Postives = 179/291 (61.51%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLIN 873
SHIRG MV MMT +TA R DS G I + DG + QL PS C FWC V +GALVKGSP+ESVANY RLA +LD+ TGP N E+A AW ILGY YGFMGD + F+EYLG AD+F T SI GS + LPAGFAEI+ + TVK+ + +LD A ++ +R D PQV A N+ +L+RY +QS F+++V+ KA S+ RR LSDD+ E G S P +DV DAM GL+ +I+F+ L+ET +R IR G+GGLLIN
Sbjct: 61 SHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDG---ITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNP----------AANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDRGGGSPHGAAPQAEDVSDAMVMGLQDGLIDFEHLQETVDRSNIRKGIGGLLIN 338
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI) HSP 1 Score: 240 bits (612), Expect = 3.200e-71 Identity = 136/291 (46.74%), Postives = 171/291 (58.76%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLIN 873
SHIRG MV MMT +TA R DS G I + DG + QL PS C FWC V +GALVKGSP+ESVANY RLA +LD+ TGP N E+A+AW I GY YGFMGD + F+EYLG AD+F T SI GS D LPAGFAEI+ K TVK+ + NLD A ++ +R R+ PQV A N+ +LYRY Q+ F+++V+ KA E G S+ P +DV DAM T L+ +I+F L+ET +RP IR G+GGLL+N
Sbjct: 61 SHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDG---ITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKVYAGNLDAAYIDFLGSRRREPPQVNP----------AANEGDLYRYFCQASAAFEELVFEKAXXXXXXXXXXXXXXXXXEDRGGGSSHGADPQAEDVSDAMVTALKDGLIDFGHLQETVDRPNIRKGIGGLLMN 338
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU19_ECTSI) HSP 1 Score: 227 bits (578), Expect = 2.840e-67 Identity = 125/291 (42.96%), Postives = 173/291 (59.45%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLIN 873
SHIRG MV MMT T ++ DS G I + DG + QL PS C FWC V +GA++KGSP+ESVANY RLA +LD+ GP N E+A+AW ILGY +G MGDM+ + EYL + +F SI +GS D LPAGFAEI+ KD V++ S +LD +ES A+ +DAPQ+ A + +LYRY+ QS F+Q V+ +A +A+RR+ +++ + G N P ++V M L+ +I+F+ L+E A+RP IR G+GGLLIN
Sbjct: 42 SHIRGVMVKMMTGPTVQQQLGALHDSLEQGQFGAIFSEDG---ITTGNQLLTGPSCCTFWCAVGVGAVLKGSPVESVANYSRLARDALDAYKGPVNAEVAKAWAILGYFHGSMGDMANYVEYLKLSGSFLMDSIEQGSTDMLPAGFAEIIRQKDNVQVYSGHLDATGIESLVAQRQDAPQIKP----------AACEGDLYRYVAQSLTAFEQDVFERACENTATRRQSRENEACEDNRSGAIPHDNAPQAEEVSAIMVAALKDGLIDFEHLQEIADRPNIRTGIGGLLIN 319
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 231 bits (588), Expect = 4.110e-67 Identity = 127/291 (43.64%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLIN 873
SHIRGAMV MM +TA + +SP T DG + QL PS C FWC V +GAL KGSP+ESVANY RLA ++D+ TGP + ++A AW ILGY YGFMGD + FEEYL +D+F ASI +GS TLP+GF EIVH+K+ VK+ N+D D SF RH+D PQ+ A + +++R++ QS + F Q+V +A G A+R SDD E S N P +++ DAM TG + +++F+ L+E + P +R G+GG LIN
Sbjct: 134 SHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDG---ITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDTGSF-TRHQDRPQINP----------AATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDGPYEEDRGDASPHGNAPRVEEISDAMVTGFKIGLLDFENLQEAVDLPNVRTGMGGFLIN 410
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU22_ECTSI) HSP 1 Score: 219 bits (557), Expect = 6.300e-66 Identity = 124/290 (42.76%), Postives = 172/290 (59.31%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSD-DKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLL 867
SHIRG M+ MM H+ A + DSP G I T DG + QL PS C FWC V +GALVKGSP+ESVANY RLA +LD+ TGP + E+A+AW ILGY YGFMGD +F EYL + +F ASI +GS D LPAGFAEIV +++ V + S +D AD++S AR + +PQ+ + V + +++ Y+ QS F + V + A SA+RR +D D C A+ G S N P ++V +AM TG + +I+F+ L++ A+R + G+ L
Sbjct: 23 SHIRGTMMRMMAHSAAQYQPGARHDSPDQGQFGAIFTEDG---ITTGNQLSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVDAEVAKAWAILGYFYGFMGDTVQFLEYLKLSGSFLVASIEQGSTDVLPAGFAEIVQYREAVMVYSGIVDAADIDSLAARSQHSPQIN----------RVVTEEDIFPYVAQSLTAFDRRVITMARKKSATRRHSTDGDPCEADV-SGSSLHGNAPRAEEVSEAMVTGFKDGLIDFEHLQDAADRSHVAHGILAAL 298
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 218 bits (556), Expect = 2.990e-65 Identity = 119/277 (42.96%), Postives = 164/277 (59.21%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETAN 831
SH+RGAMV MM H+ A + + D+P G I + DG + QL PS C FWC V +GALVKG P ESV Y RLA +LD+ TGP + E+A+AW IL YLYG+MGD +KFEEYL +D+F ASI +GS D LPAGFAE+V+HK TVK+ + N D D++S AR +D P++ A ++ +++RY+ QS F Q+ + KA A + SDD+ E S N P ++V AM G + ++EF+ L+ET +
Sbjct: 131 SHVRGAMVRMMAHSAAQHQLRARHDTPDQGQFGAIFSEDG---ITTGNQLSTGPSACTFWCAVGVGALVKGRPAESVTIYSRLARGALDAYTGPVDAEVAKAWAILAYLYGYMGDTAKFEEYLELSDSFLIASIEQGSTDMLPAGFAEMVNHKQTVKVYAGNPDATDIDSLAARRQDPPKITP----------AASERDVFRYVVQSLAAFDQMAFEKACKNRAPCGQSSDDEPYLENRGDGSPHGNAPPVEEVAHAMVAGFKDDLVEFEHLQETVD 394
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D8LU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU29_ECTSI) HSP 1 Score: 200 bits (509), Expect = 3.840e-60 Identity = 105/180 (58.33%), Postives = 122/180 (67.78%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQ 540
SHIRGAMV MMT +T + P DSPA G I T DG + QL PS C FWC V LGALVKGSP+ESV NY RLA +LD+ TGP + E+A+AW ILGYLYGFMGD KFEEYL +D+F TA+I +GS D LPAGFAEIV+HK TVK+ S N P D+E AR + PQ
Sbjct: 61 SHIRGAMVRMMTSSTPHHQPGAPHDSPAQGHFGSIFTEDG---ITPGNQLSTGPSACTFWCAVGLGALVKGSPVESVVNYSRLARDALDAYTGPVDAEVAKAWAILGYLYGFMGDTGKFEEYLELSDSFLTAAIEQGSTDMLPAGFAEIVNHKQTVKVYSGNAGPTDIEPLGARRQHPPQ 237
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 194 bits (494), Expect = 6.880e-55 Identity = 113/297 (38.05%), Postives = 166/297 (55.89%), Query Frame = 1
Query: 1 SHIRGAMVSMMTHATASRR----HQCPCDSPAPGCPYGIGTGDGNGTL-LGETQLPMDPSTCIFWCTVALGALVKGSPLESVANYFRLASVSLDSNTGPANPELARAWTILGYLYGFMGDMSKFEEYLGFADAFFTASINEGSADTLPAGFAEIVHHKDTVKMCSDNLDPADMESFCARHRDAPQVATLLLVSIYICKAVNDVELYRYLTQSFKVFQQVVYSKAWGTSASRRRLSDDKCRAEGGEGVSAKINGPLEDDVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLLING 876
SHIR MV MM T S++ C D + +G+ + E QL STC FWC VALGALVKG P+ SVA Y LA +++S +GP +A+AW IL +LY F GD F+EY+ ++AFF+AS GS + LP G+AE+V H+ TV+M S N +++ESFC + +D PQ+ A ++ ELY ++ Q+++ F+Q VY A+ S+ L + E G + V+D MA+ + + +F++LE+ A+RP IR G+GGL+ING
Sbjct: 23 SHIRETMVKMMVSPTLSQKPVFWRDCDEDD--------VLAREGDFRMPSAENQLDAGSSTCTFWCAVALGALVKGGPVTSVARYSELARDAVESYSGPVTTGVAKAWVILAFLYLFHGDTDMFQEYMARSEAFFSASGAYGSTEVLPVGYAEVVSHRMTVRMFSGNASTSEVESFCRQPQDPPQLKA----------AASETELYAFMMQAYREFEQAVYRTAYLESSDAGGLPSEN---EAGIRTCSSRVREASMAVVDTMASRISNHSCDFERLEDVADRPLIRQGIGGLIING 298 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8704.20168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8704.20168.1 >prot_Ecto-sp13_S_contig8704.20168.1 ID=prot_Ecto-sp13_S_contig8704.20168.1|Name=mRNA_Ecto-sp13_S_contig8704.20168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp MVSMMTHATASRRHQCPCDSPAPGCPYGIGTGDGNGTLLGETQLPMDPSTback to top mRNA from alignment at Ecto-sp13_S_contig8704:209..4697- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8704.20168.1 ID=mRNA_Ecto-sp13_S_contig8704.20168.1|Name=mRNA_Ecto-sp13_S_contig8704.20168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4489bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8704:209..4697- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8704:209..4697- >mRNA_Ecto-sp13_S_contig8704.20168.1 ID=mRNA_Ecto-sp13_S_contig8704.20168.1|Name=mRNA_Ecto-sp13_S_contig8704.20168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8704:209..4697- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |