mRNA_Ecto-sp13_S_contig8693.20154.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8693.20154.1
Unique NamemRNA_Ecto-sp13_S_contig8693.20154.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A6H5KHK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK4_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 1.950e-168
Identity = 249/260 (95.77%), Postives = 255/260 (98.08%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
            VAKTRQQLSGGKTTSM+SIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLL K+DGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVI+CASSLLQ EGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAG DK TKRGYDFV+GMVGGTLATIANTPFDVVKSRMQNQLKVEGQ+PKYKHTIPSLITVV EEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLN+L
Sbjct:   46 VAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVIHCASSLLQTEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGVDKATKRGYDFVSGMVGGTLATIANTPFDVVKSRMQNQLKVEGQIPKYKHTIPSLITVVSEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 305          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A7S2WF09_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WF09_9STRA)

HSP 1 Score: 253 bits (646), Expect = 9.500e-75
Identity = 133/262 (50.76%), Postives = 175/262 (66.79%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHK--EDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
            VAKTR QLS    T M+   + ++  +G   LYRGV +P+MAEAPKRA KFS N  FKK +      G L     A AG+LAGM+E  +N PFE VKV+MQAKENL R+     C ++LL+ EG   LY G+   +WRNA+WNG+YFG+IG       P PAG+ K  + GY F  G +G  + T+ NTPFDVVKSRMQ Q+ V G+  KY++++ ++  V  EEG AA+YKG+GPRLVRLGPGGGIM+V+F+ + +LL +L
Sbjct:   56 VAKTRAQLSKTPVT-MVQTLQSVVAEQGMRGLYRGVVTPIMAEAPKRAWKFSANEGFKKQVANFCPGGKLTVPATALAGALAGMSEALINCPFETVKVRMQAKENLARFKNSTECFTALLKEEGVRGLYSGIGPQMWRNALWNGMYFGVIGLASIKF-PLPAGSSKEQQLGYKFCTGSLGSCVGTLCNTPFDVVKSRMQLQVPVPGEGLKYRNSLQAISVVAREEGTAALYKGLGPRLVRLGPGGGIMIVAFDFVSNLLRDL 315          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: L8GVG8_ACACA (Mitochondrial 2oxodicarboxylate carrier 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVG8_ACACA)

HSP 1 Score: 246 bits (628), Expect = 2.100e-72
Identity = 132/260 (50.77%), Postives = 172/260 (66.15%), Query Frame = 1
Query:    1 VAKTRQQL---SGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
            V KTR QL   +  + +S+L  FRDII+ EG + LYRG+ASP+MAEAPKRA+KFS+N  +KKL     G L      AAG  AGMTE  VN PFE+VKV+MQA+ N G Y    + A S++Q EG   LY+G  S LWRN VWNG YFG+I  +K  +   P  + +  +   +F AG + G +AT+ NTPFDVVKSR+QN L   GQ  +Y +T+P+L TV  EEG AA+YKG  P+++RL PGGGIMLV+F+    +L
Sbjct:   40 VVKTRFQLQTAAEARYSSVLGTFRDIIKTEGFSKLYRGIASPIMAEAPKRAMKFSMNEQYKKLFTNASGQLSGPGHVAAGGCAGMTEALVNCPFELVKVRMQARSNAGLYKNTWHAARSVIQTEGALTLYRGFGSMLWRNGVWNGAYFGIIQQVKRLL---PVWSSERGQLATNFTAGTISGLIATMLNTPFDVVKSRIQNTLP--GQPRRYTYTLPALATVAREEGFAALYKGFVPKVLRLAPGGGIMLVAFDFFARIL 294          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A9VA38_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA38_MONBE)

HSP 1 Score: 256 bits (653), Expect = 8.240e-71
Identity = 134/259 (51.74%), Postives = 177/259 (68.34%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQ-LKVEGQVP-KYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
            VAKTR QL+  + TSM S    I + +GP  LYRGV SP++AEAPKRA KF+ N  FK LL  EDG+LP +RA  AG+LAG  E  VN PFE VKV+MQAKE+   Y   ++C+  LL  EG   LY+G+E  + RNA WNG YF  IG ++  I    +  + T  +   FV+G++GGTL  +  TPFDVVKSRMQNQ +   G V  +Y++ IPSL++++  EGLAA+YKG+GPR+VRLGPGGGIM+V+++A+   L
Sbjct:   31 VAKTRAQLNTARNTSMWSTLAQIARTDGPTGLYRGVLSPIVAEAPKRATKFAANDFFKPLLTLEDGSLPGHRAGMAGALAGSVEAFVNCPFETVKVRMQAKESRQMYQSTMDCSRQLLAKEGVAGLYRGIEPMVLRNAGWNGTYFACIGLVRNLI----SKGENTNSKLQRFVSGVIGGTLGVLVATPFDVVKSRMQNQQMASAGAVATQYRYAIPSLVSILRTEGLAAIYKGLGPRMVRLGPGGGIMIVAYDAVASWL 285          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A7S3LL18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LL18_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.250e-70
Identity = 132/264 (50.00%), Postives = 168/264 (63.64%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLH-KEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGAD------KTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
            V KTR QLS  K+ SM   F+ ++Q +G   LYRG+ +P+MAEAPKRA KFS N  FK+L   + +G L     AAAGSLAG+TE  VN PFE VKV+MQ+KE L ++ G   C + L++ EG  ++YKG E+  WRN  WNG YFG+IG I    L   A AD      K  K    F  G    ++ T+ NTPFDV KSRMQ Q    GQ+PKY++   S+  +  EEG +A+YKG+GPRLVRLGPGGGIM+V+F  I  LL
Sbjct:   30 VLKTRAQLSS-KSVSMYQTFQSVVQEQGVGGLYRGIIAPIMAEAPKRAWKFSANEKFKQLFRLRNNGELTIATGAAAGSLAGLTETIVNCPFETVKVRMQSKEFLSKFKGTAECLAYLVKNEGISSVYKGFEAQAWRNCFWNGAYFGIIGYIN---LENAARADERENMTKGEKLFEKFYVGAFASSVGTLLNTPFDVAKSRMQLQSNEAGQLPKYRYAFQSIGLIAKEEGFSAIYKGLGPRLVRLGPGGGIMIVAFEFISGLL 289          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: W9Y091_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9Y091_9EURO)

HSP 1 Score: 239 bits (611), Expect = 8.370e-70
Identity = 128/271 (47.23%), Postives = 172/271 (63.47%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTT-------SMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
            V KTR QL G            ML  FR I++NEGP+ LYRG+A+P+M EAPKRA KF+ N S    ++ L   +  T P   A   G+ AG TE  V  PFE+VK++MQ + + G+Y G+ +C    ++AEGP ALY GLES LWR+ +WN  YFG I  +K +++P     DKT     DF++G +GGT+ TI NTP DVVKSR+QN  KV G VPKY    P L T++ EEG AA+YKG  P+++RLGPGGG++LV +  ++D   +L
Sbjct:   31 VIKTRVQLQGKAPVPGQDYYNGMLDCFRKIVKNEGPSRLYRGIAAPIMMEAPKRATKFAANDSWGLFYRNLFGVQKQTQP--LAILTGATAGATEAFVVVPFELVKIRMQDRASAGKYKGIADCVVKTVKAEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALMPKVDKKDKTMAMFNDFLSGAIGGTVGTILNTPMDVVKSRIQNSPKVAGSVPKYNWAWPGLGTIMKEEGAAALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFRKL 298          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: U1GUP6_ENDPU (Mitochondrial thiamine pyrophosphate carrier 1 n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1GUP6_ENDPU)

HSP 1 Score: 238 bits (606), Expect = 1.690e-69
Identity = 123/264 (46.59%), Postives = 170/264 (64.39%), Query Frame = 1
Query:   16 QQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAA--AGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
            +QL  GK        T M+  FR I++NEG + LYRG+A+P+  EAPKRA KF+ N S+        G   + +  +   G+ AG TE  V  PFE+VK++MQ + + GRYTGV++C    ++ EGP ALY GLES LWR+ +WN  YFG I  +K S++P PA  +K    G DF++G +GGT+ TI NTP DVVKSR+QN  K+ G VPKY    P L TV+ EEG AA+YKG  P+++RLGPGGG++LV +  ++D   ++
Sbjct:    5 RQLQSGKGLAGQDHYTGMVDCFRKIVKNEGFSRLYRGIAAPICMEAPKRATKFAANDSWGLFYRNLFGVPKANQQLSILTGATAGATEAFVVVPFELVKIRMQDRASAGRYTGVMDCVVKTVKMEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-SLMPKPAPGNKAQAMGTDFMSGAIGGTVGTILNTPMDVVKSRIQNSPKIAGSVPKYNWAWPGLATVMREEGFAALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFRKM 267          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A0N1NX50_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1NX50_9EURO)

HSP 1 Score: 237 bits (605), Expect = 6.860e-69
Identity = 122/266 (45.86%), Postives = 170/266 (63.91%), Query Frame = 1
Query:    1 VAKTRQQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILD 765
            V KTR QL G K        T ML  FR I++NEG + LYRG+ +P+M EAPKRA KF+ N S    ++ L   E    P   A   G+ AG TE  V  PFE++K+++Q + + G+Y G+++C   +++ EGP ALY GLES LWR+ +WN  YFG I  +K ++LP P   +KT     DF +G +GGT+ TI NTP DVVKSR+QN  +V+G  PKY    P L T++ EEG AA+YKG  P+++RLGPGGG++LV +  +++
Sbjct:   32 VIKTRVQLQGAKPVPGQDYYTGMLDCFRKIVKNEGASRLYRGIGAPIMMEAPKRATKFAANDSWGIFYRNLFGMEKANQP--LAILTGATAGATESFVVVPFELIKIRLQDRASAGKYNGIVDCFMKIVKNEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALLPTPTKGNKTQAMVTDFTSGAIGGTVGTILNTPMDVVKSRIQNTTRVKGVAPKYNWAWPGLATMMKEEGFAALYKGFLPKVLRLGPGGGVLLVVYTNVIE 294          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A0D2J7E4_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Rhinocladiella mackenziei CBS 650.93 TaxID=1442369 RepID=A0A0D2J7E4_9EURO)

HSP 1 Score: 237 bits (604), Expect = 9.010e-69
Identity = 122/271 (45.02%), Postives = 172/271 (63.47%), Query Frame = 1
Query:    1 VAKTRQQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
            V KTR QL G          T M+  FR I++NEGP+ LYRG+ +P+M EAPKRA KF+ N S    ++ L   E  T P   A   G+ AG TE  V  PFE+VK+++Q + + G+Y G+++C    +++EGP ALY GLES LWR+ +WN  YFG I  +K +++P    +DK      DF++G +GGT+ TI NTP DVVKSR+QN  K+ GQ PKY    P L T++ EEG  A+YKG  P+++RLGPGGG++LV +  ++D   ++
Sbjct:   31 VIKTRVQLQGNVAVPGQDHYTGMIDCFRKIVKNEGPSRLYRGIGAPIMMEAPKRATKFAANDSWGLFYRNLFGVEKATQP--LAILTGATAGATEAFVVVPFELVKIRLQDRASAGKYKGIVDCVIKTVKSEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALMPKVDKSDKGKAMLTDFISGTIGGTVGTILNTPMDVVKSRIQNSPKIAGQSPKYNWAWPGLGTILKEEGFGALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFKKM 298          
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A2R5GA73_9STRA (Mitochondrial 2-oxodicarboxylate carrier 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GA73_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.040e-68
Identity = 127/268 (47.39%), Postives = 174/268 (64.93%), Query Frame = 1
Query:    1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKE--DGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL*PGGGA 798
            V KTR QL+   ++SML++ R I++ +G A  YRG+  PV+ EAPKRA KF+ N  FK+       +G L S  AAAAG+LAGM+E  VN P E VKV MQ+ +N+GR+   + C   +L+ EGP  LYKG E  + RN +WNG YFG +G +      A   A K+ K    F AG+VG  + T  NTPFDV+KSRMQNQ+   G   KY+++  SL  +V EEG++A ++G+G RL+RLGPGGGIM+V ++AI+DL++   P G A
Sbjct:   36 VLKTRAQLAT-TSSSMLTVGRQIMEKQGIAGFYRGIIPPVLGEAPKRAWKFAANDFFKEQFQSRHPEGKLTSQAAAAAGALAGMSEAVVNCPVETVKVAMQSPDNVGRFNSTLECFMGILREEGPLKLYKGFEPQVIRNGLWNGAYFGTVGLVGNHFKVADD-APKSEKLFNKFCAGVVGSCVGTTLNTPFDVIKSRMQNQITRPGVPDKYRNSFQSLALIVNEEGVSAAWRGLGARLLRLGPGGGIMIVMYSAIMDLIS---PEGSA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHK4_9PHAE1.950e-16895.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WF09_9STRA9.500e-7550.76Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
L8GVG8_ACACA2.100e-7250.77Mitochondrial 2oxodicarboxylate carrier 1, putativ... [more]
A9VA38_MONBE8.240e-7151.74Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S3LL18_9STRA4.250e-7050.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
W9Y091_9EURO8.370e-7047.23Mitochondrial thiamine pyrophosphate carrier 1 n=1... [more]
U1GUP6_ENDPU1.690e-6946.59Mitochondrial thiamine pyrophosphate carrier 1 n=2... [more]
A0A0N1NX50_9EURO6.860e-6945.86Mitochondrial thiamine pyrophosphate carrier 1 n=1... [more]
A0A0D2J7E4_9EURO9.010e-6945.02Mitochondrial thiamine pyrophosphate carrier 1 n=1... [more]
A0A2R5GA73_9STRA2.040e-6847.39Mitochondrial 2-oxodicarboxylate carrier 2 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8693contigEcto-sp13_S_contig8693:1280..6630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Stop1
Start1
Seed ortholog score246.1
Seed ortholog evalue1.7e-62
Seed eggNOG ortholog81824.XP_001749609.1
Preferred nameSLC25A21
Model size2142
KEGG koko:K15110
KEGG TC2.A.29.2.4,2.A.29.2.5,2.A.29.2.8
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006553,GO:0006554,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0015075,GO:0015139,GO:0015318,GO:0015711,GO:0015742,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0098656,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1903825,GO:1905039,GO:1990542,GO:1990550,GO:1990551
Exons7
EggNOG free text desc.Belongs to the mitochondrial carrier (TC 2.A.29) family
EggNOG OGs38CTW@33154,KOG0754@1,KOG0754@2759
Cds size738
COG Functional cat.C
BiGG ReactioniMM904.YPL134C,iND750.YPL134C
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8693.20154.1prot_Ecto-sp13_S_contig8693.20154.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8693 2744..6585 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464142.007366-UTR-Ecto-sp13_S_contig8693:1279..25241681464142.007366-UTR-Ecto-sp13_S_contig8693:1279..2524Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8693 1280..2524 -
1681464142.0213273-UTR-Ecto-sp13_S_contig8693:2629..27431681464142.0213273-UTR-Ecto-sp13_S_contig8693:2629..2743Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8693 2630..2743 -
1681464142.1065955-UTR-Ecto-sp13_S_contig8693:6585..66301681464142.1065955-UTR-Ecto-sp13_S_contig8693:6585..6630Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8693 6586..6630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464142.0323312-CDS-Ecto-sp13_S_contig8693:2743..28371681464142.0323312-CDS-Ecto-sp13_S_contig8693:2743..2837Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 2744..2837 -
1681464142.0421963-CDS-Ecto-sp13_S_contig8693:3353..34691681464142.0421963-CDS-Ecto-sp13_S_contig8693:3353..3469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 3354..3469 -
1681464142.0523176-CDS-Ecto-sp13_S_contig8693:3863..40121681464142.0523176-CDS-Ecto-sp13_S_contig8693:3863..4012Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 3864..4012 -
1681464142.0668902-CDS-Ecto-sp13_S_contig8693:4507..46551681464142.0668902-CDS-Ecto-sp13_S_contig8693:4507..4655Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 4508..4655 -
1681464142.078655-CDS-Ecto-sp13_S_contig8693:5789..59001681464142.078655-CDS-Ecto-sp13_S_contig8693:5789..5900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 5790..5900 -
1681464142.0907528-CDS-Ecto-sp13_S_contig8693:6465..65851681464142.0907528-CDS-Ecto-sp13_S_contig8693:6465..6585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8693 6466..6585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8693.20154.1

>prot_Ecto-sp13_S_contig8693.20154.1 ID=prot_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKED
GTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCAS
SLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKT
TKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPS
LITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL*
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mRNA from alignment at Ecto-sp13_S_contig8693:1280..6630-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8693.20154.1 ID=mRNA_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8693:1280..6630- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGCGAAGACACGACAGCAACTCTCGGGAGGGAAAACGACCTCGATGCT GTCCATCTTCCGAGACATCATCCAGAACGAGGGGCCTGCCAACCTCTACC GAGGCGTGGCGAGCCCGGTGATGGCAGAGGCGCCCAAGAGGGCAATCAAG TTCAGCCTCAACGCGGTGGGTAAACCCTGCACGCCCCCTGTCGACTGGTT TAACACGAACTCTTTCGGCGACTGAGTTAATGTAAATGCGGCCGCTACAG CCTGGTGGCAATTCGTCGAGGAAAAAAGTTGCACAAACAAATACGTATGT GACGTGTCCACCTAGCAGTTGTTTGGGCAGACAAACGTGTGCACAACTTG TTCCACAAGGTATCGCCCATGTTCGGAAGCCGTGGTGAGTTGCCAGGCAG TAAGCATCTGCGAGTAAAGCTGTTGGCCTCTGCACAGCAGTAGTATTGGA GGTCGCCATCAAGATGGTGCAAGACCTGAGGATCGATCGCACGCGGCTTT CTGTTCACCCTTTGGCCTGTTATTCGTTGTTGCTCTCCCTGCAGAAGCTC CGCCACGCATTGAAAGATTGTATCGGCATCTGTTGCCCGAACAACAATGA CCACGAGTAATAAGAAGGACAAGACGACAACGAAAACACCCGCATAAGAC CACCACCAACCACGATCATTCCCAAGAGCACACCAACAACAGCCCTTCAC CACGCCATCGCGTTTGTATGTCGGGTGCAGTCATTCAAGAAGCTTCTCCA TAAAGAAGACGGGACTCTGCCGTCCTACCGAGCGGCTGCGGCGGGATCTC TGGCGGGGATGACGGAGTGCTCCGTCAACACCCCTTTCGAGGTCAGCTAT GTGTGTGTGTGTGTGTTTTTTTTTCGTCCTTTTTATTATGGAGACAGTTC CCCCATTTGTTCGTGGTGTGACGTGTACCACATTTTTCAGTGTATGTAGA GTACCGCGCTATTCAGGGTACTTTTTCGTACAACTACAACCATCCAGGCT CACACAAGAGGGGGTACGCACCGGGGCCTTTTTCTCTCTTTTTATTTTAT GCAAAAAATGAGCACCGGAAGAAATCTGATTCTCGGCAGGCCAAAGTGTG GAAACTAGGAGTCGCCTCCTCAGTGGGTACTTTTTTTTTTTGTTAGGATG AGAAAAGAAGTTAGTCATGTAGCCCCTTGTCTCAAGTACCCGAAAACTCA CCTTATAAAATGCAAAGGCCTGTTGGCGAGACCGCAAAATCATGGCAGAC TGGAAAGGCATCGGCAAGGAACTGCTGTTGTTGGCCATTTTTTGTTCACA CACCTCAAAGCGCCGGGCGGAGGAAAAGCGAAGACAAACCGACCATGCGG ACAGCGTCAGGGGTAGCGGAGGGCTTGCGCCGAGGAGAAGGAACGAAGCA GATAACGGCACCGCCACCACGGCTGTTCCTGTGCCAAGACCAACCCCGAT CCTGTGTCGGTGCCACCCCTGTTCCAACGTCAATGCCACCACTTTTTCCT GTTGCGATCGGGTTGTGAAGGACGTTAAAGTTGCGCACAAGGTCCCTCGA CGCTACAACCCCACCCCGCTTTTGGTCTTCTTACAATATAAGCGTCTCTT TACCTACCAATTAGATGCCGAGACGTACAGGTGCCACAAGCACACGTACT CACCCCGATACGCCACGCTCGGCGGATCAGGTGGTGGAGATGCTCATGCA CGAACGCCGATCCCTTCCTACTGTTTTAACTTTGTTTCGTCAGTATGAGC TGGAGAACGAGGTGGTTGGTGTACCGAACTTGAAGTATCTTCTAAGCACA AAGTTCCCCCCCCCTCCCGGGTTATCCTCTGTGAAACGTGGCCTGGGCCG GCGAAAACGCGGCATACCGCTCCATTCCGGCGTGCGAGGTCAATGCTCTA ACGACATGACAGGTGTGCGTTTGCGTGACAACATCCTCCCCCCCCCCATT TTGGATGTTTCTGTCGGCCAATCAGGTGGTGAAGGTACAGATGCAGGCCA AGGAAAACCTGGGGCGTTACACCGGGGTCATCAATTGCGCATCCAGCCTG TTGCAGGCTGAAGGCCCGTTCGCACTGTACAAGGGGCTGGAGTCGCATCT TTGGAGGAACGCAGTCTGGAATGGTGAGCAGCAGGGGGAGAGGCAGGGGG GGGGCTCGCTCCAGTGAAAGCCCGGGACAAGACTCACATCCGTTTGTCTT GGAACCCGTTTTGCCATCACACGCTGCCGTCTCCACATTCTGACGTCTAC ACCGAGGGGGTGTCGCCGCAGTGAAAGTTTACATAGCACAAGGCACACAT CCGTTTGTCTTGGAACACGTTTGGTTGTCACACGCTACCATCTTCACGTT CTTCAGTCCACAATTTTGCTGTTACCTCCACGCGAAACGATTTATTTACG AATTCAACACGTCAAGGCAAGCACCACGTGGAAAAAGGAAGAAGACTCAA ACCTCCGATGTGGCCTTCCTCCTGTTTTTTTCCCGTCTGGAACGTCCAAA CATGCCAAGAACACATGTACCGCTGACGTCGAAGCATGCGGAGACTGACG CCTAGAACATACGGGATGACAACATTCACACTATGGTGTTATTTATCACA ACAACTTTTGACATGCAGGCGTGTACTTTGGCATGATCGGCGCCATCAAG ACATCTATCCTGCCTGCACCGGCGGGTGCCGATAAGACGACGAAGAGGGG CTACGATTTCGTGGCGGGGATGGTGGGAGGCACGCTGGCGACGATAGCCA ACACGCCGTTTGATGTGGTGGGTGGAAGCGAATGTCTGCAGCTACGACAA GAACGGCTGTAGCTTGTGACAATATCATCTGTATCTTCAAGACGAGAACG TCAGTGGCTGAGACACGAACGTGTGTAGCTTCAGACAAGCTCGTCTGCAG CTTAAGACAGGAGCGTCTGTCGCTCAAGACAAGAACGTCTGTCGCTTACG ACAAGGACACCTGTGGTCGTCTATAGCGAAGACAAGAAGGCACGGAAGCT GTGGAAGCGGTGAATTGTCGTGGCCGTTTACACGAGACGCAAAAGCGAGA AAAGTCAAAAGATTTTGTTGTAGTATCTGCCGTGTTCGTCACGAAAAGAT TTGTTTTCTGCTCCCTCTTGCTATTTCGCCGTTGGATTGTGTCGCCTGAT TGGCTTTTCAGGTGAAGTCGCGAATGCAGAACCAGCTCAAGGTGGAGGGC CAAGTTCCCAAGTACAAGCATACGATCCCGTCCCTCATCACAGTCGTGGG CGAGGAGGGATTGGCAGCCGTGTACAAGTGAGTCAGGGTGGTTTCTGGGT CCATCAGCTTTGTAAGCGTACTCAATGGACACGCACACATCATGTAGATG TTGTTGTTGTGGTTGTTGTTGTTGTTTTCTTATTGTATCCTTGCTGTTGT TCTTGTCTTCACACTAACAACCGCTTCGGTCTCCGCTTAGCACCGTGTAC ACCCGTACCGGTCCAACCGACGCGACGCCTTCCGTGGTGACAGACCAACT TCTCTTGAAGTAATAAGTGTTTTTGTTTTTGTTTTGTTGGTCGTTTTTCT GTGGTGGGAAGACATGTTTGTTGTATGGATGTCCCGTCCGTTTCCGTGCC CACCTTTTCCGCTTGGCACGCCGTGCATTTTGCCTCGCTGCTGTCGCTCG CGCGCGCTCGCGAACATGTGAGCCGCTTTCATATGGATCTTGTGTTACGT TGCTACACATCTCGTGGCGGCGCTTCACACGCCCACCATCCATCTCCGTC TCGATTGTTTTCTTTGCGAACCGTTCGTTGATCGGATCGACAGGGGCATC GGCCCACGACTCGTCCGGCTGGGCCCCGGCGGCGGAATCATGCTCGTGTC CTTCAACGCCATCTTGGACCTACTCAACGAATTATGACCAGGGGGTGGTG CTGACGAGACCCAGCAGCATCCGCTAGCTGTGTGGTCGGTAGCTTTACGA GTAGGTGCGTGTCGAGACCGACCGGCCGACTTTTTTTTTTTCTGGAGGCG TTTTTTACCGTTAGCATCGCCGCTGCGTTCCTTAAGGTGTTGCTGGGACG AAAGAACGGCGGTGCGGATAGAGGGGCAAAGAACGCCAGCCAGTGTTTGG TTCTGCGAAAAGTTAGTTGGACATCGGCTTTTCGACATATGGTGCGCTTC ATCGGAACCAAATTAGTCTCTTGGGCGAAATTCTGGTGTGTTGACTCGTC CGGGTGGCGCTAGTTTTGATACGCTTTCCTAGTTTGATGGCGGGTGACCT CGTGTTGTTGGTTGCACTGACCGAGTAATACGTGTTAGGTTCGATGTGTT TTTTCTGTTTCTTGGTACGAAATGGGTTCGTTGTCAACACACTCACGCCA TTGCTTTCAAAAGGCGCTGCTGCTCATTTTCAAGATGGCACTGCGGTGCT GATCGTCCTTGCTCTGTAAGTCGTAGGTCTAGTCCCGATCGTGAGAGTAT TCTTTCATGAGTCGGCAGGCAGTTCAGCAGTATGTTGCCAAGGTCAAATA CCCGCACGGTCTTACGTTGAACAACCGCAAACGTGCGTTGTACAATTACT GGATGTGTTTTTGGAGTATTTTGGGACGTCGCTAATCTTGTCAGTTTTGC CGCCCCCCCCGGTGTTTTTGGTGTTGCGTGGCGCCTTCCAGTTAACGATT TTATGCGAATCACATTGTTTTGTTTGCAAACCCTTTGAGTATGGGTCGTT GATACGCGCGACGTGCGTAGTGTGTGTGGTGTGTGTTGTACGATAGGAGA GCGGTTCCTTCTGAGGCATCAACAAGCGAAACGCCTTGTTCCGTTTTGGT TGCCCCGCTACCTGTACCAATTTTGTGTCGGTTGTCTACTTTGGTATGGG GGCGGGGTGGGGGGTGATGAAGCGATCGCGATATGGTGTGGTTTTGATTT GGCGTTGGAAGTGATTATAGTTTTGTGGAACGGCGGTGGCACGTTTGAAA AGACTTTTGGTATTTGTTCGGTGAACGATACCCGAGTGTTTGGTTTGATG TTAATCAATCACACGGATTAATCCTCATTGGCCCAGTAGCATACATGTGG TGGGATCCCGCGTGCCCTTGAACTCTCTCTGAGTGCGATACATTTTCATA CCTCCACAGAGAAGGAAGGCTATCAATGACGACACGGCGACGTGGGAAAG GGCCCACAGTCAGCTATTATAGGCGCTTGGATCGATCCTCCGGGTTTTCA CGCGACGATTACTTATTGAAGGCTTTGACGTCAACGGGGCGGTGGTTGGC GACCGCGGGGGGCTGATTCGGACAAGGGAAGTCAAGCGTGCGTGTTGTAT GATTTACACACACAGCCGATTGCAAACAGTTTGGAAAATGATACCATGGC A
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8693:1280..6630-

>mRNA_Ecto-sp13_S_contig8693.20154.1 ID=mRNA_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=738bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8693:1280..6630- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTCCATCTTCCGAGACATCATCCAGAACGAGGGGCCTGCCAACCT
CTACCGAGGCGTGGCGAGCCCGGTGATGGCAGAGGCGCCCAAGAGGGCAA
TCAAGTTCAGCCTCAACGCGTCATTCAAGAAGCTTCTCCATAAAGAAGAC
GGGACTCTGCCGTCCTACCGAGCGGCTGCGGCGGGATCTCTGGCGGGGAT
GACGGAGTGCTCCGTCAACACCCCTTTCGAGGTGGTGAAGGTACAGATGC
AGGCCAAGGAAAACCTGGGGCGTTACACCGGGGTCATCAATTGCGCATCC
AGCCTGTTGCAGGCTGAAGGCCCGTTCGCACTGTACAAGGGGCTGGAGTC
GCATCTTTGGAGGAACGCAGTCTGGAATGGCGTGTACTTTGGCATGATCG
GCGCCATCAAGACATCTATCCTGCCTGCACCGGCGGGTGCCGATAAGACG
ACGAAGAGGGGCTACGATTTCGTGGCGGGGATGGTGGGAGGCACGCTGGC
GACGATAGCCAACACGCCGTTTGATGTGGTGAAGTCGCGAATGCAGAACC
AGCTCAAGGTGGAGGGCCAAGTTCCCAAGTACAAGCATACGATCCCGTCC
CTCATCACAGTCGTGGGCGAGGAGGGATTGGCAGCCGTGTACAAGGGCAT
CGGCCCACGACTCGTCCGGCTGGGCCCCGGCGGCGGAATCATGCTCGTGT
CCTTCAACGCCATCTTGGACCTACTCAACGAATTATGA
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