mRNA_Ecto-sp13_S_contig8693.20154.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A6H5KHK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK4_9PHAE) HSP 1 Score: 494 bits (1272), Expect = 1.950e-168 Identity = 249/260 (95.77%), Postives = 255/260 (98.08%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
VAKTRQQLSGGKTTSM+SIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLL K+DGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVI+CASSLLQ EGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAG DK TKRGYDFV+GMVGGTLATIANTPFDVVKSRMQNQLKVEGQ+PKYKHTIPSLITVV EEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLN+L
Sbjct: 46 VAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVIHCASSLLQTEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGVDKATKRGYDFVSGMVGGTLATIANTPFDVVKSRMQNQLKVEGQIPKYKHTIPSLITVVSEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 305
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A7S2WF09_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WF09_9STRA) HSP 1 Score: 253 bits (646), Expect = 9.500e-75 Identity = 133/262 (50.76%), Postives = 175/262 (66.79%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHK--EDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
VAKTR QLS T M+ + ++ +G LYRGV +P+MAEAPKRA KFS N FKK + G L A AG+LAGM+E +N PFE VKV+MQAKENL R+ C ++LL+ EG LY G+ +WRNA+WNG+YFG+IG P PAG+ K + GY F G +G + T+ NTPFDVVKSRMQ Q+ V G+ KY++++ ++ V EEG AA+YKG+GPRLVRLGPGGGIM+V+F+ + +LL +L
Sbjct: 56 VAKTRAQLSKTPVT-MVQTLQSVVAEQGMRGLYRGVVTPIMAEAPKRAWKFSANEGFKKQVANFCPGGKLTVPATALAGALAGMSEALINCPFETVKVRMQAKENLARFKNSTECFTALLKEEGVRGLYSGIGPQMWRNALWNGMYFGVIGLASIKF-PLPAGSSKEQQLGYKFCTGSLGSCVGTLCNTPFDVVKSRMQLQVPVPGEGLKYRNSLQAISVVAREEGTAALYKGLGPRLVRLGPGGGIMIVAFDFVSNLLRDL 315
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: L8GVG8_ACACA (Mitochondrial 2oxodicarboxylate carrier 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVG8_ACACA) HSP 1 Score: 246 bits (628), Expect = 2.100e-72 Identity = 132/260 (50.77%), Postives = 172/260 (66.15%), Query Frame = 1
Query: 1 VAKTRQQL---SGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
V KTR QL + + +S+L FRDII+ EG + LYRG+ASP+MAEAPKRA+KFS+N +KKL G L AAG AGMTE VN PFE+VKV+MQA+ N G Y + A S++Q EG LY+G S LWRN VWNG YFG+I +K + P + + + +F AG + G +AT+ NTPFDVVKSR+QN L GQ +Y +T+P+L TV EEG AA+YKG P+++RL PGGGIMLV+F+ +L
Sbjct: 40 VVKTRFQLQTAAEARYSSVLGTFRDIIKTEGFSKLYRGIASPIMAEAPKRAMKFSMNEQYKKLFTNASGQLSGPGHVAAGGCAGMTEALVNCPFELVKVRMQARSNAGLYKNTWHAARSVIQTEGALTLYRGFGSMLWRNGVWNGAYFGIIQQVKRLL---PVWSSERGQLATNFTAGTISGLIATMLNTPFDVVKSRIQNTLP--GQPRRYTYTLPALATVAREEGFAALYKGFVPKVLRLAPGGGIMLVAFDFFARIL 294
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A9VA38_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA38_MONBE) HSP 1 Score: 256 bits (653), Expect = 8.240e-71 Identity = 134/259 (51.74%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQ-LKVEGQVP-KYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
VAKTR QL+ + TSM S I + +GP LYRGV SP++AEAPKRA KF+ N FK LL EDG+LP +RA AG+LAG E VN PFE VKV+MQAKE+ Y ++C+ LL EG LY+G+E + RNA WNG YF IG ++ I + + T + FV+G++GGTL + TPFDVVKSRMQNQ + G V +Y++ IPSL++++ EGLAA+YKG+GPR+VRLGPGGGIM+V+++A+ L
Sbjct: 31 VAKTRAQLNTARNTSMWSTLAQIARTDGPTGLYRGVLSPIVAEAPKRATKFAANDFFKPLLTLEDGSLPGHRAGMAGALAGSVEAFVNCPFETVKVRMQAKESRQMYQSTMDCSRQLLAKEGVAGLYRGIEPMVLRNAGWNGTYFACIGLVRNLI----SKGENTNSKLQRFVSGVIGGTLGVLVATPFDVVKSRMQNQQMASAGAVATQYRYAIPSLVSILRTEGLAAIYKGLGPRMVRLGPGGGIMIVAYDAVASWL 285
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A7S3LL18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LL18_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.250e-70 Identity = 132/264 (50.00%), Postives = 168/264 (63.64%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLH-KEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGAD------KTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLL 771
V KTR QLS K+ SM F+ ++Q +G LYRG+ +P+MAEAPKRA KFS N FK+L + +G L AAAGSLAG+TE VN PFE VKV+MQ+KE L ++ G C + L++ EG ++YKG E+ WRN WNG YFG+IG I L A AD K K F G ++ T+ NTPFDV KSRMQ Q GQ+PKY++ S+ + EEG +A+YKG+GPRLVRLGPGGGIM+V+F I LL
Sbjct: 30 VLKTRAQLSS-KSVSMYQTFQSVVQEQGVGGLYRGIIAPIMAEAPKRAWKFSANEKFKQLFRLRNNGELTIATGAAAGSLAGLTETIVNCPFETVKVRMQSKEFLSKFKGTAECLAYLVKNEGISSVYKGFEAQAWRNCFWNGAYFGIIGYIN---LENAARADERENMTKGEKLFEKFYVGAFASSVGTLLNTPFDVAKSRMQLQSNEAGQLPKYRYAFQSIGLIAKEEGFSAIYKGLGPRLVRLGPGGGIMIVAFEFISGLL 289
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: W9Y091_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9Y091_9EURO) HSP 1 Score: 239 bits (611), Expect = 8.370e-70 Identity = 128/271 (47.23%), Postives = 172/271 (63.47%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTT-------SMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
V KTR QL G ML FR I++NEGP+ LYRG+A+P+M EAPKRA KF+ N S ++ L + T P A G+ AG TE V PFE+VK++MQ + + G+Y G+ +C ++AEGP ALY GLES LWR+ +WN YFG I +K +++P DKT DF++G +GGT+ TI NTP DVVKSR+QN KV G VPKY P L T++ EEG AA+YKG P+++RLGPGGG++LV + ++D +L
Sbjct: 31 VIKTRVQLQGKAPVPGQDYYNGMLDCFRKIVKNEGPSRLYRGIAAPIMMEAPKRATKFAANDSWGLFYRNLFGVQKQTQP--LAILTGATAGATEAFVVVPFELVKIRMQDRASAGKYKGIADCVVKTVKAEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALMPKVDKKDKTMAMFNDFLSGAIGGTVGTILNTPMDVVKSRIQNSPKVAGSVPKYNWAWPGLGTIMKEEGAAALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFRKL 298
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: U1GUP6_ENDPU (Mitochondrial thiamine pyrophosphate carrier 1 n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1GUP6_ENDPU) HSP 1 Score: 238 bits (606), Expect = 1.690e-69 Identity = 123/264 (46.59%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 16 QQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDGTLPSYRAAA--AGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
+QL GK T M+ FR I++NEG + LYRG+A+P+ EAPKRA KF+ N S+ G + + + G+ AG TE V PFE+VK++MQ + + GRYTGV++C ++ EGP ALY GLES LWR+ +WN YFG I +K S++P PA +K G DF++G +GGT+ TI NTP DVVKSR+QN K+ G VPKY P L TV+ EEG AA+YKG P+++RLGPGGG++LV + ++D ++
Sbjct: 5 RQLQSGKGLAGQDHYTGMVDCFRKIVKNEGFSRLYRGIAAPICMEAPKRATKFAANDSWGLFYRNLFGVPKANQQLSILTGATAGATEAFVVVPFELVKIRMQDRASAGRYTGVMDCVVKTVKMEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-SLMPKPAPGNKAQAMGTDFMSGAIGGTVGTILNTPMDVVKSRIQNSPKIAGSVPKYNWAWPGLATVMREEGFAALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFRKM 267
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A0N1NX50_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1NX50_9EURO) HSP 1 Score: 237 bits (605), Expect = 6.860e-69 Identity = 122/266 (45.86%), Postives = 170/266 (63.91%), Query Frame = 1
Query: 1 VAKTRQQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILD 765
V KTR QL G K T ML FR I++NEG + LYRG+ +P+M EAPKRA KF+ N S ++ L E P A G+ AG TE V PFE++K+++Q + + G+Y G+++C +++ EGP ALY GLES LWR+ +WN YFG I +K ++LP P +KT DF +G +GGT+ TI NTP DVVKSR+QN +V+G PKY P L T++ EEG AA+YKG P+++RLGPGGG++LV + +++
Sbjct: 32 VIKTRVQLQGAKPVPGQDYYTGMLDCFRKIVKNEGASRLYRGIGAPIMMEAPKRATKFAANDSWGIFYRNLFGMEKANQP--LAILTGATAGATESFVVVPFELIKIRLQDRASAGKYNGIVDCFMKIVKNEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALLPTPTKGNKTQAMVTDFTSGAIGGTVGTILNTPMDVVKSRIQNTTRVKGVAPKYNWAWPGLATMMKEEGFAALYKGFLPKVLRLGPGGGVLLVVYTNVIE 294
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A0D2J7E4_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Rhinocladiella mackenziei CBS 650.93 TaxID=1442369 RepID=A0A0D2J7E4_9EURO) HSP 1 Score: 237 bits (604), Expect = 9.010e-69 Identity = 122/271 (45.02%), Postives = 172/271 (63.47%), Query Frame = 1
Query: 1 VAKTRQQLSGGKT-------TSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNAS----FKKLLHKEDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL 780
V KTR QL G T M+ FR I++NEGP+ LYRG+ +P+M EAPKRA KF+ N S ++ L E T P A G+ AG TE V PFE+VK+++Q + + G+Y G+++C +++EGP ALY GLES LWR+ +WN YFG I +K +++P +DK DF++G +GGT+ TI NTP DVVKSR+QN K+ GQ PKY P L T++ EEG A+YKG P+++RLGPGGG++LV + ++D ++
Sbjct: 31 VIKTRVQLQGNVAVPGQDHYTGMIDCFRKIVKNEGPSRLYRGIGAPIMMEAPKRATKFAANDSWGLFYRNLFGVEKATQP--LAILTGATAGATEAFVVVPFELVKIRLQDRASAGKYKGIVDCVIKTVKSEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-ALMPKVDKSDKGKAMLTDFISGTIGGTVGTILNTPMDVVKSRIQNSPKIAGQSPKYNWAWPGLGTILKEEGFGALYKGFLPKVLRLGPGGGVLLVVYTGVMDWFKKM 298
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Match: A0A2R5GA73_9STRA (Mitochondrial 2-oxodicarboxylate carrier 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GA73_9STRA) HSP 1 Score: 236 bits (601), Expect = 2.040e-68 Identity = 127/268 (47.39%), Postives = 174/268 (64.93%), Query Frame = 1
Query: 1 VAKTRQQLSGGKTTSMLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKE--DGTLPSYRAAAAGSLAGMTECSVNTPFEVVKVQMQAKENLGRYTGVINCASSLLQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNEL*PGGGA 798
V KTR QL+ ++SML++ R I++ +G A YRG+ PV+ EAPKRA KF+ N FK+ +G L S AAAAG+LAGM+E VN P E VKV MQ+ +N+GR+ + C +L+ EGP LYKG E + RN +WNG YFG +G + A A K+ K F AG+VG + T NTPFDV+KSRMQNQ+ G KY+++ SL +V EEG++A ++G+G RL+RLGPGGGIM+V ++AI+DL++ P G A
Sbjct: 36 VLKTRAQLAT-TSSSMLTVGRQIMEKQGIAGFYRGIIPPVLGEAPKRAWKFAANDFFKEQFQSRHPEGKLTSQAAAAAGALAGMSEAVVNCPVETVKVAMQSPDNVGRFNSTLECFMGILREEGPLKLYKGFEPQVIRNGLWNGAYFGTVGLVGNHFKVADD-APKSEKLFNKFCAGVVGSCVGTTLNTPFDVIKSRMQNQITRPGVPDKYRNSFQSLALIVNEEGVSAAWRGLGARLLRLGPGGGIMIVMYSAIMDLIS---PEGSA 298 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8693.20154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8693.20154.1 >prot_Ecto-sp13_S_contig8693.20154.1 ID=prot_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp MLSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLHKEDback to top mRNA from alignment at Ecto-sp13_S_contig8693:1280..6630- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8693.20154.1 ID=mRNA_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8693:1280..6630- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8693:1280..6630- >mRNA_Ecto-sp13_S_contig8693.20154.1 ID=mRNA_Ecto-sp13_S_contig8693.20154.1|Name=mRNA_Ecto-sp13_S_contig8693.20154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=738bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8693:1280..6630- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |