mRNA_Ecto-sp13_S_contig869.20150.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig869.20150.1
Unique NamemRNA_Ecto-sp13_S_contig869.20150.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A6H5KEN7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN7_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 9.320e-161
Identity = 229/236 (97.03%), Postives = 233/236 (98.73%), Query Frame = 1
Query:   55 MSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSLE 762
            MSKDAWYP+LDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATK GE GDQV+FTNDVRLR+SSPS+LTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGS E
Sbjct:    1 MSKDAWYPVLDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRSSSPSHLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSQE 236          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: D8LB99_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB99_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 3.770e-108
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 1
Query:    1 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVR 486
            EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATK GE GDQV+FTNDVR
Sbjct:   63 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR 224          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A835Z7B1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B1_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.880e-47
Identity = 109/284 (38.38%), Postives = 149/284 (52.46%), Query Frame = 1
Query:    1 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKV-------------------YKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRL-------VAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLV-LPGSHHLHLDDETAPLVASHTAAFLHGREGSLEVPA 771
            EG+EVVAID PGHG S H S D WY I+DYP  +     +LGW+    +GHS+G  +ASLVA + P+ V  CVF+D LGPF      +   LR ++ SR AL++K+ KV                   + S + AV+ R+ A   +   QT+S   A  L       V+    +G+ G  VRF  D+RLR  S +YL+E++V  +L  I   CL++ G+TG   +      F AR +  G RL D   LPGSHHLHLD E+   V   T  FL   + S +  A
Sbjct:   71 EGYEVVAIDLPGHGLSSHTSSDNWYDIMDYPHSIAAVQDALGWDSCHYLGHSLGAGIASLVAGALPDRVTGCVFIDALGPFTLAPHGAHMHLRRAMQSRAALLNKQQKVXXXXXXXXXXXXXXXXXXXWPSLELAVQARVAAAADYPGSQTISKEAAAILMQRSIEPVSPEHNNGKAGG-VRFRYDLRLRAYSSTYLSEDTVSAFLSNIACPCLLVTGQTGFPLSGG----FRARMQTLGPRLADHAHLPGSHHLHLDPESWQGVRDVTLKFLADLQESSDAAA 349          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7S4RJ08_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RJ08_9DINO)

HSP 1 Score: 156 bits (395), Expect = 1.950e-40
Identity = 100/263 (38.02%), Postives = 148/263 (56.27%), Query Frame = 1
Query:    4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWE-KFSMVGHSMGGAVASLVAAS-FPE---MVERCVFLDILGPFASRTGTSPKLLRASVASR----RALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGET-GMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSLE 762
            GF  VA+D+PGHGRS H S+D  Y + D P Y  +AAR+LGWE  +++VGHS+G + A+++AAS +P    +   C  +D+LGP +  +  +   L  ++ +R      L+ +  +VY SFDE V+ RL+AV      Q ++   A  LV  A +    G    F +D R++  SPSY TE+ VL  L+AI +  L++  +  G  A      ++  R+ A    LR  VLPG HHLHLD +TAP V++  +AFL    G  E
Sbjct:  145 GFLAVAVDWPGHGRSAHRSRDTSYGLSDLPWYAHQAARALGWEGAYALVGHSLGASAATILAASAYPSSGTLAALCC-IDVLGPLSKTSSNTAVHLELALRARDKHLERLLRRSRRVYASFDECVQARLRAVRALPGDQLLTPEAAASLVERAVEEMHRGAWT-FRHDPRVQAPSPSYYTEDQVLALLRAIRTPTLLVEADPEGGHAWPRPAEQWEVRRGAVAG-LRRAVLPGGHHLHLDPDTAPAVSTAVSAFLEEVAGQCE 404          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7U7G8P2_9GAMM (Putative hydrolase n=1 Tax=Candidatus Contendobacter odensis Run_B_J11 TaxID=1400861 RepID=A0A7U7G8P2_9GAMM)

HSP 1 Score: 145 bits (367), Expect = 1.280e-37
Identity = 90/246 (36.59%), Postives = 125/246 (50.81%), Query Frame = 1
Query:   13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 732
            +VA+D PGHG+S+       Y  +D+   V+ AA  LGWE F+++GHS+GG +AS VAA  PE V R   ++ LGP  S     P  LR ++     L DK P VY S D A++ R +A         +SW  A  LV+   +   EG    +  D RLR +SP YL E  +L Y++ I +  L+I G  G L     + E  AR       L   +LPG HH HL+D        AP  A+ +A+
Sbjct:   52 LVALDLPGHGQSEQRPPGMHYHFVDFIPDVVAAADVLGWEYFALLGHSLGGGIASFVAAILPERVTRVAMIEGLGPPTSHPADGPIHLRKTIEQMNGLPDKRPPVYPSMDAAIQARCEA-------SDLSWRAAATLVSRGVQPIGEG--YGWRTDPRLRFASPLYLNEPQILAYMERIAAPALLICGADGYLVKRAYMQERYARIA----NLSVNILPGGHHPHLEDPEPCARLLAPFFAAESAS 284          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7C6VZM9_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VZM9_9GAMM)

HSP 1 Score: 144 bits (362), Expect = 6.090e-37
Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 1
Query:    4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 732
            G  +VA+D PGHG SD       Y  +D+   V+  A +LGW++F+++GHS+GG +AS VAA+ PE + R   ++ LGP  S     P  LR ++     L  K P +Y + + A++ R +A         +SW  A  LV  + ++   GD   +  D RLR  SP YL+E  +L Y++ I +  L+I G  G L     + E  AR    G  +R  +LPG HH HL+D        AP  A+  AA
Sbjct:   49 GVRLVALDLPGHGHSDCRPPGVHYHFVDFIPDVVATADALGWDRFALLGHSLGGGIASFVAATLPERIARLAMIEGLGPPTSNPADGPTHLRKAIEQMNGLPRKRPPLYPNLEAAIQARCEA-------SGLSWTAAAILVGRSIQA--VGDGYGWRTDPRLRFVSPLYLSEPQILAYMERIAAPALLICGADGYLVKRAYMQERYAR--IAGLTVR--ILPGGHHPHLEDPEPCARLLAPFFAADRAA 284          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A2A4SQQ0_9DELT (Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SQQ0_9DELT)

HSP 1 Score: 143 bits (360), Expect = 1.190e-36
Identity = 86/247 (34.82%), Postives = 137/247 (55.47%), Query Frame = 1
Query:   13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGV-AEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGRE 750
            +VAID PGHG S+H      Y  +DY E V+ AA +LGW++F+++GHS+GGAVASL+A + PE +   VF+D LGP++     +P  L+ ++  R+    ++   Y + ++ V  R +     G+ +T S    +R    AT+ G     + +T+D RL  SSP Y++++    +L+ I + CL+I GE G+L +   + + F    +   +RL     PG+HHLHLD  T   VA     FL   +
Sbjct:   53 LVAIDLPGHGLSEHRPMGTNYHFIDYIEDVVAAADALGWQEFALIGHSLGGAVASLIAGTIPERILSAVFIDSLGPWSQDPCQAPHFLQRALRQRKNQSQRKSPTYPNLEQMVAMREQV----GKIETKSVEAILRRGVRATEGG-----LTWTSDPRLTLSSPLYMSDDHARAFLENISAPCLVIEGEQGILLDNPRMRSRFGIIPQMQHQRL-----PGNHHLHLD--TPEPVARSIRCFLENHK 283          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7D5IS59_9PSED (Alpha/beta fold hydrolase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A7D5IS59_9PSED)

HSP 1 Score: 142 bits (358), Expect = 2.520e-36
Identity = 86/248 (34.68%), Postives = 125/248 (50.40%), Query Frame = 1
Query:    4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGE--GQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET-APLVASHTAAFL 738
            G  +VA+DF GHG SDH    A Y I DY + V+E A   GW++FS++GHSMG  V+ L+A + PE VER   +D L P+      +P+ L  ++ ++ AL  K   VY  F  AV  R++ V        + ++  G + +  G T          +  D RL   SP  LT   V+ +++ ++    ++  E G+LA    +AE +  +     RL     PG HHLHLDDE  A LVA     FL
Sbjct:   52 GLRIVALDFAGHGHSDHRPAGASYAIWDYVQDVLEVAEQFGWQRFSLLGHSMGAIVSVLLAGALPERVERLALIDGLIPYTGEAEDAPQRLGEALKAQMALTGKRKPVYAEFSRAVEARMRGVGAVSREAAELLAQRGLMPVPGGYT----------WRTDSRLTLPSPLRLTRAHVMAFIQRLQCPVNLVLAEQGLLAAHPQLAELLGERPITLSRL-----PGGHHLHLDDEEGAALVADCFKGFL 284          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A2D4RY64_9DELT (Alpha/beta hydrolase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A2D4RY64_9DELT)

HSP 1 Score: 142 bits (358), Expect = 2.780e-36
Identity = 83/228 (36.40%), Postives = 121/228 (53.07%), Query Frame = 1
Query:   13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDD 696
            +V++D  GHG SDH+     Y  +D  + +   A  LGWEKF+++GHSMG AV +L+A   PE V+  + ++ LGPF+ R    P+ LR SV   + +  K   +Y   + AV+ R K          M  +    LV    +  E G  V + +D RLR  S +Y +EE +L +LK I    L+IRG+     N D      AR E   + L+D++LPG HHLHLD+
Sbjct:   58 LVSLDLHGHGFSDHLPPGIAYHFVDSVDLMFGVADQLGWEKFNLIGHSMGAAVGALMAGVIPERVQNMILIEGLGPFSRRESFGPRALRLSVEGMKNIERKSMPLYPDLEAAVQARYKV-------GGMKLDSVRTLVQRGVRMLENG--VTWASDSRLRVGSRTYFSEEQILEFLKQIRCPTLLIRGDFYFQENPDWQQRMRARCEYVPD-LQDVLLPGGHHLHLDN 275          
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A519VPP2_9BACT (Alpha/beta hydrolase n=1 Tax=Hymenobacter sp. TaxID=1898978 RepID=A0A519VPP2_9BACT)

HSP 1 Score: 141 bits (356), Expect = 3.240e-36
Identity = 94/243 (38.68%), Postives = 127/243 (52.26%), Query Frame = 1
Query:   16 VAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHG 744
            VA+D PGHG S H   DA Y ++D+   V++AA +LGW +F +VGHSMG AVA+LVAA +PE V++ V LD LGP +      P  L         L+ + P  Y + D  V T  + V        +    A  L +  ++  E G   R   D RLR +S   LTE  VL +L +IE   L+IR  +G    A    E +  + A   RL+ + +PG HH HL D  AP VA+  AAFL G
Sbjct:   38 VALDLPGHGHSAHRGADAHYHMVDWVGDVMDAAEALGWSRFVLVGHSMGAAVAALVAACYPEAVDKLVLLDGLGPLSREAAQGPAHLALHRRQVSRLLARLPAAYPTLDAMVTTLCRVVP------GLDRASATLLASRGSQRTERGYVNRC--DRRLRATSLFALTEAQVLAFLSSIECAALLIRPTSGFAFGA----EQIRTRCAAFNRLQVVEVPGHHHAHLVD--APQVAAPVAAFLRG 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEN7_9PHAE9.320e-16197.03AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
D8LB99_ECTSI3.770e-10898.15AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A835Z7B1_9STRA2.880e-4738.38Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S4RJ08_9DINO1.950e-4038.02Hypothetical protein n=3 Tax=Alexandrium monilatum... [more]
A0A7U7G8P2_9GAMM1.280e-3736.59Putative hydrolase n=1 Tax=Candidatus Contendobact... [more]
A0A7C6VZM9_9GAMM6.090e-3734.94Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bact... [more]
A0A2A4SQQ0_9DELT1.190e-3634.82Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacter... [more]
A0A7D5IS59_9PSED2.520e-3634.68Alpha/beta fold hydrolase n=2 Tax=Pseudomonas TaxI... [more]
A0A2D4RY64_9DELT2.780e-3636.40Alpha/beta hydrolase n=5 Tax=Proteobacteria TaxID=... [more]
A0A519VPP2_9BACT3.240e-3638.68Alpha/beta hydrolase n=1 Tax=Hymenobacter sp. TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig869contigEcto-sp13_S_contig869:14198..19192 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score283.9
Seed ortholog evalue9.7e-74
Seed eggNOG ortholog2880.D8LB99
Model size1066
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-27_004680.1
Cds size987
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig869.20150.1prot_Ecto-sp13_S_contig869.20150.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig869 14223..19138 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464141.757776-UTR-Ecto-sp13_S_contig869:14197..142221681464141.757776-UTR-Ecto-sp13_S_contig869:14197..14222Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig869 14198..14222 -
1681464141.8484843-UTR-Ecto-sp13_S_contig869:19138..191921681464141.8484843-UTR-Ecto-sp13_S_contig869:19138..19192Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig869 19139..19192 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464141.7743056-CDS-Ecto-sp13_S_contig869:14222..145761681464141.7743056-CDS-Ecto-sp13_S_contig869:14222..14576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 14223..14576 -
1681464141.7879133-CDS-Ecto-sp13_S_contig869:14963..151651681464141.7879133-CDS-Ecto-sp13_S_contig869:14963..15165Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 14964..15165 -
1681464141.798919-CDS-Ecto-sp13_S_contig869:15895..159951681464141.798919-CDS-Ecto-sp13_S_contig869:15895..15995Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 15896..15995 -
1681464141.810474-CDS-Ecto-sp13_S_contig869:16480..165671681464141.810474-CDS-Ecto-sp13_S_contig869:16480..16567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 16481..16567 -
1681464141.8290958-CDS-Ecto-sp13_S_contig869:17465..176471681464141.8290958-CDS-Ecto-sp13_S_contig869:17465..17647Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 17466..17647 -
1681464141.8390465-CDS-Ecto-sp13_S_contig869:19076..191381681464141.8390465-CDS-Ecto-sp13_S_contig869:19076..19138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig869 19077..19138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig869.20150.1

>prot_Ecto-sp13_S_contig869.20150.1 ID=prot_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp
MSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEM
VERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVR
TRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSP
SYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLR
DLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSLEVPALILDYEKEIAR
VAMLAGGRGAVFVFAGLEKVVSTTYDGPRPSETKHRSFVPLVVATRCQLL
RFIRSRCFPPPPHTLPWQGQACIELMYS*
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mRNA from alignment at Ecto-sp13_S_contig869:14198..19192-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig869.20150.1 ID=mRNA_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig869:14198..19192- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGCTTCGAGGTTGTGGCGATCGATTTTCCAGGTCACGGTCGGTCGGA CCACATGAGCAAGGACGCCTGGTACCCGATCCTGGACTACCCTGAGTATG TCATCGAGGCCGCGAGGTAAAACGATCAACAAACCAGTATTTTTTTTGTG TGTCGGGGGATGACGCTGCTGACCAGAAGTAACCGGTTTCAAACATTCGT TCCGGTTGGACTGATCGACGTCGTCTCTGGTTAGTCGACCGGCTGGCGCG GTTGGTGCTAGCTAGAGAAACACCCAAAGACAGCCTACATCTGGTATCCT AGATATGACGGCAAGATGTTTAGACAGATGGGAACCGTAGCTTCGGGCCG GCGACCGACACAACGCACTCGAAGGCTTGTCATACACCTGAGGGCACTAC TTGCAGCAGTCATACTGGCAGCAGTGACTTGTCATTCCCGGTGCTCTTGA ACCGCCTTCGCTGAGATCCTTTTCTGTTCAGCTTCCGCTGCGGCACGCTC CGGGATGTTCATCCGTTCGTTGGCGCGATTGGTGTTTTTAGTGCCTGGAC AAGGACAGGGGGGAAAAAACGTCCTCGTACAGGTTTAGTTTGCGTTCTTC TTGTCGCTGTTGTCCGGTGTTCGCCGCTACCCAGCACCAAAGGAATTGAA TCGTTTGCACGAGGCTTCAGCACCCTCCCGTCGTTTATCAAGCGAATCTT GTTGTTTGTCCCCTTGTTTCATTCTGTCTATGTCCGTCGCTCGTAGTCCC TACCCAATCGTACGGCGGTGCCTCTCCTGAAGGCAAGGGCTTCGATCCGG CATCAAGCAAAATGTGTCCCTCTGCTGTGAATGCCGTGGGGTGCATGCCT AATGGTGATAAAACTCTGACCGACCACCCGGTCCCTTGGGTCTGTGGTCG ATGTTGACTTCGTCATCGTTTCCTACATTGCTGCCATTTTCATCGTTGCT GTTGTTGTTGGTATTTATTGCTGGCGTCACGCGAAAGAGTCAGTCTGGCC TTTGTCCGGCCTTTGTTTCCTCTCCTAAACTGGCAGAAACCTACAAGGTG GGACACCCCCTCCCTCCCCCGCCACAGTAAAAAAGGGGGGAAGGCGGGGG GGGGCGATTTTCTCACCTTTCCTCGCTCTCCAAAAAGAACGACCACAGAG TCACTCGAACGTAAATCGGTAAGCGCAGGCTTGGCTTCAGCAAGGTGCGA CTACGCCCCCGTGCCAAGAGAGGGTTAAAAAATGCAACCCTTTTTGGGCG GATGCTTAGGGGAAGAGGAAGGAGTGGCTCACGGCGATGCTTTTTGAGCA AATCCAAGCATGTCACCGTGATAGGAAGGCGGTTTTCCTCTACAGGGCAT CATTGCGGGAGAGGCAGTATATATGTTACCGTTCGTGTTCCCGACGCGTG TAACGGTCGAAATTTTCGTGCCGACAACGTCTCCAACGACAAGCTTTCGT TTCCCCCGGCGGCCGGCACCGTCCCCGCCGCCGCTGCCGTCGCTGCGAAC CTTTTCCGGCGTTGTTCGTGGCTCTCTTTCTCGTGTCGTCTCAAGATCGC TGGGGTGGGAAAAGTTTTCCATGGTGGGGCACTCGATGGGGGGAGCGGTG GCGTCGCTGGTAGCGGCGAGCTTTCCCGAGATGGTGGAGCGGTGCGTCTT TCTCGACATCCTCGGCCCGTTCGCCTCCAGAACCGGGACATCCCCCAAGC TCCTGCGCGCGAGCGTCGCTTCCCGGAGTGAGCTACAGTACAGTCGTGTC TCCGATATAAGAGGAGAGGTGCCTTGCAAGAGGTGCCTCCGACAAAAGAG GGTCGAAACAGGTTGTCACAGAATCGACCCACTCAGAATAGTTGAGTGCC CTCTGTTCCCGGTTTAGGAGGGCGCGCCGATGTTGGAGGGTCGAGGGCCT TTGTCCCACCACCCTCTGATATCGGAGACATTACTGTAGCTCCCTTCTGC TGCTGCTGCTGCTGCTGCTGCCTGCTGTTGTCGCCAAATAGCACTCTATT TGTTGCGCTCTCGCAAACCCATCCCGACCTCCTTTCCAAGTGCTGCGATG CCATGTTTGTGGCGTACGAGTTATTAGAAGGTAGATTGTCGTGCTGGCGT TCGTTCGGGGGGGGGGGACAGGGTGCTTCGTGCTCACACCCGGAGATAGT GCCTGGAGTAGCGCGCACGACACCAAGACTTCGTTTATTTTCTTGTTCAC AACAGCCAGTTCCGCGTGGTAGTGTGCCGCTACTCGACCTCAGCAATGGT TTCGCGTGCCTTTTACCTGGTTTGCTTGAAGGATGCCGTGGGTTGCTGAA GAATGTTTTCTAATGCGTCGCTCAGTAAACTCTCATCTAATGGGCGGCTG GCCAATGTTTCACCAGGCTTTGGAAAAGAAGCCGCGAGACAACAGTAGCA GCCTCCGCCGGTGTGTGGGGCGGGTAGATTTTCAACAGGAAGAAGCATCG GTCATACGTTTCTAGGGTGCCTGCAGCTTACAACATGAAAAGACGTCGCC CACGTTGTTCATTGCTAAGGTTCTTGCAGATTAAAGCATGGCGAAACGCC GCTTGTACGTTGTTTCTTGGCTATGGTCCCTGCAGCTTGAAAACATGACA AATATGCCACTCGTACCGTCGCTAGGGGCGCTGGTCGACAAGGAGCCCAA GGTGTACAAGTCCTTTGACGAGGCGGTCCGAACAAGGCTCAAGGCTGTGA CCATGTGGGGAGGTGCGACAAACACCAGCGCCGTTGCCTCGCCAGACAGA CGTGGTTGACCTTGTTACCTACCATAGCAAACTGCAGCCACAGAGGATGA TGCCGTTCGCCGTCGACACTCGTGAACCGCGTGTGCCATGGTTTTTCACG TTCGGCCTGGGTAAAAGTTTTACCCCAACTTGCACAATGTGGCAGCAAAC CTCGCTCCCGAGACTGGTTTTAGCGGATAACGCTCTAAGGATGAGGTGCC TCATCAAAGTATATTGGGTTGTGACTTTGGATCATCGTTTGCGGGAAACT TGAAGACAACTGCCCTCCAAGTTCGTCATGAATAGTTCTCAAGACCGCCG CTGATGCCGCCCGGCTGCCGCTGCTGCTGCTTGCCCCACATAGAGCGCGC CATGCTTCCGCTGTACGGTCGTAGAAAACGGGTTTTCGTTGTCATTCTTT CGCTACGAAATGCGTACCCCATTCGCGACATCGTTTTTTGTTGGCAGAGG GACAGACAATGAGCTGGAATGGCGCGGTCCGTTTGGTGGCGGGAGCGACG AAATCGGGGGAAGAGGGCGACCAGGTCCGGTTCACGAACGATGTCAGGTA CGAGGGGTGATCGGTGTTCACATCGGGCATCTCTCCGCGTCGGTGGTCGT CTGTTTTATTTTTCCGACCCGGTCTGGGATTGTTTGCCTCTCTCTCTCTC TCCCTCCCCCTACCTCCGCTCGCACCCTTTCATTTGTCCTTCCTTACCCC TCGTCGTAGATGAGAGAGAGCAAGTATCGCTGGAACGCGTCTGTTCTAAG GAATCGCACAAGGCACATACACCTTCAGGAGAGTGGCCAGTTGCCGGGAA ATGGTTCTATCACAACACCACCTGTGGAGTACAATTGATTGTGGAACGGG CCGAGTAGACCAAGATGGAACTATTTTTGTGCGGTCATTGCTCTCGATCT GGAGGTGGTAGTCGCGTCAGAGATCCAGACGCTTTGTTTCTCGTCCTGCG ACAGACTGTGGCGATGATGATCGTGTCTTCGATTTCGTTAGCCCGTTTAG ATGCCCACTAAAGACACACACACACACCTCACCACGTGGTCAGCGACACC GTGTGTCTCCTTTTTTTTGTTTTTTCGTGAGAGACTGTCATGCTTTCGTC TTGTGAGCTGGTTGGCCAAATCTATGCTACGGCAGCAGTTGAGAGACACA CCAACAATCTTCAGTAACGTACCCTCGTGTGCCCGTTGGAAGACGTCGAA AAGAAGGTTGATCCGTTCCGGTTCCGAGATGCGTAAGGCGACGTACTCCT CACAGCAGCAACTGGTATTGATTCCAGGTTACGAAACTCATCGCCCAGCT ACCTGACGGAGGAGTCGGTGCTGATGTACCTTAAGGCGATCGAGAGCGAG TGCTTGATGATCAGGGGCGAGACGGGAATGCTGGCCAACGCCGACGGCGT GGCGGAGTTCGTGGCGAGAAAGGAGGCCTGCGGGGAGCGCTTACGGGACC TTGTGCTTCCCGGAAGTCATCACTTGCACGTGAGTCGGCGATCGGTGTAC TTTTCGTGTTGGTGGAATGTTGACCGCAGTTGGAAAGCTGCCGAGTCGGT ACGAGTGAGGAAGGGGTTGTGGTGTTTGTCCACAGCCAGCAGCACTATCG TGCACCTAAACGTATTGGTGGTGTGTGCCTCTATGGCAGCATTGCTATTT TGTTTCATGTTTTTGTGGTTGCCTCTGCATTCGAGAAACGTTCTGATTCG ATACTTGCACGACATCCGCGATGGTCTGCAAGAGTGTCTCCGCGATTGAT CACAGGCTAATTCAAACATGACACAAATCACTCCCAACATTCCGCCGTGT GGTGTGTGCCAATCCAATCCCCTTGTCCGCTCCACGTCTCCTTCGTTTCG TTTTCTTGGTTGCCAGTTGGACGACGAGACTGCGCCCTTGGTTGCTTCGC ACACGGCGGCGTTTCTTCACGGGCGAGAAGGTTCGCTAGAAGTTCCCGCA CTCATCCTAGATTATGAAAAGGAAATCGCCCGGGTGGCAATGCTCGCCGG GGGGCGGGGAGCGGTATTCGTATTTGCTGGCCTTGAGAAAGTCGTTTCTA CGACATACGACGGTCCCCGCCCATCTGAGACGAAGCATCGTTCGTTCGTA CCACTCGTTGTAGCCACAAGGTGTCAGCTTCTTCGCTTTATCCGGTCGCG TTGCTTCCCCCCTCCCCCCCACACGCTCCCTTGGCAGGGACAAGCATGCA TAGAATTGATGTATTCTTGAGGCCGCCAGGAGGTAGCGATGGGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig869:14198..19192-

>mRNA_Ecto-sp13_S_contig869.20150.1 ID=mRNA_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig869:14198..19192- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAAGGACGCCTGGTACCCGATCCTGGACTACCCTGAGTATGTCAT
CGAGGCCGCGAGATCGCTGGGGTGGGAAAAGTTTTCCATGGTGGGGCACT
CGATGGGGGGAGCGGTGGCGTCGCTGGTAGCGGCGAGCTTTCCCGAGATG
GTGGAGCGGTGCGTCTTTCTCGACATCCTCGGCCCGTTCGCCTCCAGAAC
CGGGACATCCCCCAAGCTCCTGCGCGCGAGCGTCGCTTCCCGGAGGGCGC
TGGTCGACAAGGAGCCCAAGGTGTACAAGTCCTTTGACGAGGCGGTCCGA
ACAAGGCTCAAGGCTGTGACCATGTGGGGAGAGGGACAGACAATGAGCTG
GAATGGCGCGGTCCGTTTGGTGGCGGGAGCGACGAAATCGGGGGAAGAGG
GCGACCAGGTCCGGTTCACGAACGATGTCAGGTTACGAAACTCATCGCCC
AGCTACCTGACGGAGGAGTCGGTGCTGATGTACCTTAAGGCGATCGAGAG
CGAGTGCTTGATGATCAGGGGCGAGACGGGAATGCTGGCCAACGCCGACG
GCGTGGCGGAGTTCGTGGCGAGAAAGGAGGCCTGCGGGGAGCGCTTACGG
GACCTTGTGCTTCCCGGAAGTCATCACTTGCACTTGGACGACGAGACTGC
GCCCTTGGTTGCTTCGCACACGGCGGCGTTTCTTCACGGGCGAGAAGGTT
CGCTAGAAGTTCCCGCACTCATCCTAGATTATGAAAAGGAAATCGCCCGG
GTGGCAATGCTCGCCGGGGGGCGGGGAGCGGTATTCGTATTTGCTGGCCT
TGAGAAAGTCGTTTCTACGACATACGACGGTCCCCGCCCATCTGAGACGA
AGCATCGTTCGTTCGTACCACTCGTTGTAGCCACAAGGTGTCAGCTTCTT
CGCTTTATCCGGTCGCGTTGCTTCCCCCCTCCCCCCCACACGCTCCCTTG
GCAGGGACAAGCATGCATAGAATTGATGTATTCTTGA
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