mRNA_Ecto-sp13_S_contig869.20150.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A6H5KEN7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN7_9PHAE) HSP 1 Score: 458 bits (1179), Expect = 9.320e-161 Identity = 229/236 (97.03%), Postives = 233/236 (98.73%), Query Frame = 1
Query: 55 MSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSLE 762
MSKDAWYP+LDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATK GE GDQV+FTNDVRLR+SSPS+LTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGS E
Sbjct: 1 MSKDAWYPVLDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVRLRSSSPSHLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSQE 236
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: D8LB99_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB99_ECTSI) HSP 1 Score: 324 bits (831), Expect = 3.770e-108 Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 1
Query: 1 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVR 486
EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATK GE GDQV+FTNDVR
Sbjct: 63 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKPGEGGDQVQFTNDVR 224
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A835Z7B1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B1_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.880e-47 Identity = 109/284 (38.38%), Postives = 149/284 (52.46%), Query Frame = 1
Query: 1 EGFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKV-------------------YKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRL-------VAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLV-LPGSHHLHLDDETAPLVASHTAAFLHGREGSLEVPA 771
EG+EVVAID PGHG S H S D WY I+DYP + +LGW+ +GHS+G +ASLVA + P+ V CVF+D LGPF + LR ++ SR AL++K+ KV + S + AV+ R+ A + QT+S A L V+ +G+ G VRF D+RLR S +YL+E++V +L I CL++ G+TG + F AR + G RL D LPGSHHLHLD E+ V T FL + S + A
Sbjct: 71 EGYEVVAIDLPGHGLSSHTSSDNWYDIMDYPHSIAAVQDALGWDSCHYLGHSLGAGIASLVAGALPDRVTGCVFIDALGPFTLAPHGAHMHLRRAMQSRAALLNKQQKVXXXXXXXXXXXXXXXXXXXWPSLELAVQARVAAAADYPGSQTISKEAAAILMQRSIEPVSPEHNNGKAGG-VRFRYDLRLRAYSSTYLSEDTVSAFLSNIACPCLLVTGQTGFPLSGG----FRARMQTLGPRLADHAHLPGSHHLHLDPESWQGVRDVTLKFLADLQESSDAAA 349
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7S4RJ08_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RJ08_9DINO) HSP 1 Score: 156 bits (395), Expect = 1.950e-40 Identity = 100/263 (38.02%), Postives = 148/263 (56.27%), Query Frame = 1
Query: 4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWE-KFSMVGHSMGGAVASLVAAS-FPE---MVERCVFLDILGPFASRTGTSPKLLRASVASR----RALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGET-GMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGREGSLE 762
GF VA+D+PGHGRS H S+D Y + D P Y +AAR+LGWE +++VGHS+G + A+++AAS +P + C +D+LGP + + + L ++ +R L+ + +VY SFDE V+ RL+AV Q ++ A LV A + G F +D R++ SPSY TE+ VL L+AI + L++ + G A ++ R+ A LR VLPG HHLHLD +TAP V++ +AFL G E
Sbjct: 145 GFLAVAVDWPGHGRSAHRSRDTSYGLSDLPWYAHQAARALGWEGAYALVGHSLGASAATILAASAYPSSGTLAALCC-IDVLGPLSKTSSNTAVHLELALRARDKHLERLLRRSRRVYASFDECVQARLRAVRALPGDQLLTPEAAASLVERAVEEMHRGAWT-FRHDPRVQAPSPSYYTEDQVLALLRAIRTPTLLVEADPEGGHAWPRPAEQWEVRRGAVAG-LRRAVLPGGHHLHLDPDTAPAVSTAVSAFLEEVAGQCE 404
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7U7G8P2_9GAMM (Putative hydrolase n=1 Tax=Candidatus Contendobacter odensis Run_B_J11 TaxID=1400861 RepID=A0A7U7G8P2_9GAMM) HSP 1 Score: 145 bits (367), Expect = 1.280e-37 Identity = 90/246 (36.59%), Postives = 125/246 (50.81%), Query Frame = 1
Query: 13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 732
+VA+D PGHG+S+ Y +D+ V+ AA LGWE F+++GHS+GG +AS VAA PE V R ++ LGP S P LR ++ L DK P VY S D A++ R +A +SW A LV+ + EG + D RLR +SP YL E +L Y++ I + L+I G G L + E AR L +LPG HH HL+D AP A+ +A+
Sbjct: 52 LVALDLPGHGQSEQRPPGMHYHFVDFIPDVVAAADVLGWEYFALLGHSLGGGIASFVAAILPERVTRVAMIEGLGPPTSHPADGPIHLRKTIEQMNGLPDKRPPVYPSMDAAIQARCEA-------SDLSWRAAATLVSRGVQPIGEG--YGWRTDPRLRFASPLYLNEPQILAYMERIAAPALLICGADGYLVKRAYMQERYARIA----NLSVNILPGGHHPHLEDPEPCARLLAPFFAAESAS 284
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7C6VZM9_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VZM9_9GAMM) HSP 1 Score: 144 bits (362), Expect = 6.090e-37 Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 1
Query: 4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET------APLVASHTAA 732
G +VA+D PGHG SD Y +D+ V+ A +LGW++F+++GHS+GG +AS VAA+ PE + R ++ LGP S P LR ++ L K P +Y + + A++ R +A +SW A LV + ++ GD + D RLR SP YL+E +L Y++ I + L+I G G L + E AR G +R +LPG HH HL+D AP A+ AA
Sbjct: 49 GVRLVALDLPGHGHSDCRPPGVHYHFVDFIPDVVATADALGWDRFALLGHSLGGGIASFVAATLPERIARLAMIEGLGPPTSNPADGPTHLRKAIEQMNGLPRKRPPLYPNLEAAIQARCEA-------SGLSWTAAAILVGRSIQA--VGDGYGWRTDPRLRFVSPLYLSEPQILAYMERIAAPALLICGADGYLVKRAYMQERYAR--IAGLTVR--ILPGGHHPHLEDPEPCARLLAPFFAADRAA 284
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A2A4SQQ0_9DELT (Alpha/beta hydrolase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SQQ0_9DELT) HSP 1 Score: 143 bits (360), Expect = 1.190e-36 Identity = 86/247 (34.82%), Postives = 137/247 (55.47%), Query Frame = 1
Query: 13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGV-AEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHGRE 750
+VAID PGHG S+H Y +DY E V+ AA +LGW++F+++GHS+GGAVASL+A + PE + VF+D LGP++ +P L+ ++ R+ ++ Y + ++ V R + G+ +T S +R AT+ G + +T+D RL SSP Y++++ +L+ I + CL+I GE G+L + + + F + +RL PG+HHLHLD T VA FL +
Sbjct: 53 LVAIDLPGHGLSEHRPMGTNYHFIDYIEDVVAAADALGWQEFALIGHSLGGAVASLIAGTIPERILSAVFIDSLGPWSQDPCQAPHFLQRALRQRKNQSQRKSPTYPNLEQMVAMREQV----GKIETKSVEAILRRGVRATEGG-----LTWTSDPRLTLSSPLYMSDDHARAFLENISAPCLVIEGEQGILLDNPRMRSRFGIIPQMQHQRL-----PGNHHLHLD--TPEPVARSIRCFLENHK 283
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A7D5IS59_9PSED (Alpha/beta fold hydrolase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A7D5IS59_9PSED) HSP 1 Score: 142 bits (358), Expect = 2.520e-36 Identity = 86/248 (34.68%), Postives = 125/248 (50.40%), Query Frame = 1
Query: 4 GFEVVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGE--GQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDET-APLVASHTAAFL 738
G +VA+DF GHG SDH A Y I DY + V+E A GW++FS++GHSMG V+ L+A + PE VER +D L P+ +P+ L ++ ++ AL K VY F AV R++ V + ++ G + + G T + D RL SP LT V+ +++ ++ ++ E G+LA +AE + + RL PG HHLHLDDE A LVA FL
Sbjct: 52 GLRIVALDFAGHGHSDHRPAGASYAIWDYVQDVLEVAEQFGWQRFSLLGHSMGAIVSVLLAGALPERVERLALIDGLIPYTGEAEDAPQRLGEALKAQMALTGKRKPVYAEFSRAVEARMRGVGAVSREAAELLAQRGLMPVPGGYT----------WRTDSRLTLPSPLRLTRAHVMAFIQRLQCPVNLVLAEQGLLAAHPQLAELLGERPITLSRL-----PGGHHLHLDDEEGAALVADCFKGFL 284
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A2D4RY64_9DELT (Alpha/beta hydrolase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A2D4RY64_9DELT) HSP 1 Score: 142 bits (358), Expect = 2.780e-36 Identity = 83/228 (36.40%), Postives = 121/228 (53.07%), Query Frame = 1
Query: 13 VVAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDD 696
+V++D GHG SDH+ Y +D + + A LGWEKF+++GHSMG AV +L+A PE V+ + ++ LGPF+ R P+ LR SV + + K +Y + AV+ R K M + LV + E G V + +D RLR S +Y +EE +L +LK I L+IRG+ N D AR E + L+D++LPG HHLHLD+
Sbjct: 58 LVSLDLHGHGFSDHLPPGIAYHFVDSVDLMFGVADQLGWEKFNLIGHSMGAAVGALMAGVIPERVQNMILIEGLGPFSRRESFGPRALRLSVEGMKNIERKSMPLYPDLEAAVQARYKV-------GGMKLDSVRTLVQRGVRMLENG--VTWASDSRLRVGSRTYFSEEQILEFLKQIRCPTLLIRGDFYFQENPDWQQRMRARCEYVPD-LQDVLLPGGHHLHLDN 275
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Match: A0A519VPP2_9BACT (Alpha/beta hydrolase n=1 Tax=Hymenobacter sp. TaxID=1898978 RepID=A0A519VPP2_9BACT) HSP 1 Score: 141 bits (356), Expect = 3.240e-36 Identity = 94/243 (38.68%), Postives = 127/243 (52.26%), Query Frame = 1
Query: 16 VAIDFPGHGRSDHMSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMVERCVFLDILGPFASRTGTSPKLLRASVASRRALVDKEPKVYKSFDEAVRTRLKAVTMWGEGQTMSWNGAVRLVAGATKSGEEGDQVRFTNDVRLRNSSPSYLTEESVLMYLKAIESECLMIRGETGMLANADGVAEFVARKEACGERLRDLVLPGSHHLHLDDETAPLVASHTAAFLHG 744
VA+D PGHG S H DA Y ++D+ V++AA +LGW +F +VGHSMG AVA+LVAA +PE V++ V LD LGP + P L L+ + P Y + D V T + V + A L + ++ E G R D RLR +S LTE VL +L +IE L+IR +G A E + + A RL+ + +PG HH HL D AP VA+ AAFL G
Sbjct: 38 VALDLPGHGHSAHRGADAHYHMVDWVGDVMDAAEALGWSRFVLVGHSMGAAVAALVAACYPEAVDKLVLLDGLGPLSREAAQGPAHLALHRRQVSRLLARLPAAYPTLDAMVTTLCRVVP------GLDRASATLLASRGSQRTERGYVNRC--DRRLRATSLFALTEAQVLAFLSSIECAALLIRPTSGFAFGA----EQIRTRCAAFNRLQVVEVPGHHHAHLVD--APQVAAPVAAFLRG 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig869.20150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig869.20150.1 >prot_Ecto-sp13_S_contig869.20150.1 ID=prot_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp MSKDAWYPILDYPEYVIEAARSLGWEKFSMVGHSMGGAVASLVAASFPEMback to top mRNA from alignment at Ecto-sp13_S_contig869:14198..19192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig869.20150.1 ID=mRNA_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4995bp|location=Sequence derived from alignment at Ecto-sp13_S_contig869:14198..19192- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig869:14198..19192- >mRNA_Ecto-sp13_S_contig869.20150.1 ID=mRNA_Ecto-sp13_S_contig869.20150.1|Name=mRNA_Ecto-sp13_S_contig869.20150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig869:14198..19192- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |