mRNA_Ecto-sp13_S_contig868.20131.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig868.20131.1
Unique NamemRNA_Ecto-sp13_S_contig868.20131.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: D8LF30_ECTSI (C3HC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF30_ECTSI)

HSP 1 Score: 840 bits (2169), Expect = 4.610e-302
Identity = 443/507 (87.38%), Postives = 457/507 (90.14%), Query Frame = 1 
Query:    1 MPKDLEEKVVAALARFDTAVRQSNPIRLKQREEDPREIDVLERIAAEANGARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLERLDSLLPVMRAATLSEVSLPSSFEQHCPGGLSALAAKVRALWTQARSADATAAGTKAMASVVVTSEENSENRTAGAHKRQRSGSGNAAGSAENREILRFGDEMLGTAAAIAMFGWQSTPATVPISVCAAVSPTGGSSSNGSTVAGADGRARATAKAPARLSCALCKRRLVTDNFLVLEAGPSSGVGCTAAGTGAEESPGALSSPEGQGGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWATVHPPVAGEEAIEGAVPGWRLPLEAVLGWQDPSKQDQVLSTQKERGGFSDGGNGEVEGALQKVQKVLGVLMRY 1521
            MPKDLEEKVVAALARFDTAVRQ+NPIRL Q++EDPREIDVLERIAAEA+GARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQA G DGNAAN DV G     + AVVEPTPSSSFSSRL+SQHHDLCPWNGNACP EFLQLPPMAVED LADFL RLDSLLPVMRAA L EVSLPS+FEQHCPGGLSALAAK                   AM SVV T EE SENRTAGAHKRQRSGSG AAGSA+NRE+LRFGDEMLGTAAAIAMFGWQS PATVP+S CAAVSPT GSSSNGSTVA ADG ARATAK+PARLSCALCKRRLVTDNFL LEAGPSSGVGCTAAGTGAEESPG LSSPEG+GGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWA VHPPVAGEEAIEGAVPGWRLPLEAVLGWQ+PSKQ+QVLSTQKERGGFSD  NGEVEGALQKVQKVLGVLMRY
Sbjct:    1 MPKDLEEKVVAALARFDTAVRQANPIRLNQQQEDPREIDVLERIAAEADGARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQAAGSDGNAANDDVCGXXXXXIVAVVEPTPSSSFSSRLQSQHHDLCPWNGNACPREFLQLPPMAVEDQLADFLARLDSLLPVMRAAALPEVSLPSTFEQHCPGGLSALAAK-------------------AMPSVVETREETSENRTAGAHKRQRSGSGKAAGSADNREMLRFGDEMLGTAAAIAMFGWQSAPATVPVSACAAVSPTEGSSSNGSTVAVADGGARATAKSPARLSCALCKRRLVTDNFLTLEAGPSSGVGCTAAGTGAEESPGVLSSPEGRGGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWAAVHPPVAGEEAIEGAVPGWRLPLEAVLGWQNPSKQEQVLSTQKERGGFSDAANGEVEGALQKVQKVLGVLMRY 488
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A446UPU7_TRITD (C3HC-type domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446UPU7_TRITD)

HSP 1 Score: 89.0 bits (219), Expect = 1.130e-14
Identity = 50/163 (30.67%), Postives = 75/163 (46.01%), Query Frame = 1 
Query:  160 LADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLERLDSLL-----PVMRAATLSEVSL 633
            L   P+CRPW+      RLATF P  W +KP  AS  VCA+ GW+N   D + C+ C A L F+  A+                   +         +F+++L + H + CPW GN+C    +QL  +    L+  F +R D LL     PV+  + +  + L
Sbjct:   43 LDSAPSCRPWERGDLLRRLATFKPSTWEAKPKAASSLVCAQRGWVNVDMDKIECESCGAHLIFSALAS------------------WSPTEVTNAGEAFAAQLDASHKNSCPWRGNSCADNLVQLH-LTQSALIGGFKDRCDGLLQFLSLPVIALSAIENMRL 186
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A453LZW4_AEGTS (C3HC-type domain-containing protein n=40 Tax=Pooideae TaxID=147368 RepID=A0A453LZW4_AEGTS)

HSP 1 Score: 89.4 bits (220), Expect = 1.140e-14
Identity = 50/163 (30.67%), Postives = 74/163 (45.40%), Query Frame = 1 
Query:  160 LADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLERLDSLLPVMRAATLSEVSLPSSFE 648
            L   P+CRPW+      RLATF P  W +KP  AS  VCA+ GW+N   D + C+ C A L F+  A+                   +         +F+ +L + H + CPW GN+C    +QL  +    L+  F +R D LL  +    ++    PS+ E
Sbjct:   43 LDSAPSCRPWERGDLLRRLATFKPSTWDAKPKAASSLVCAQRGWVNVDMDKIECESCGAHLLFSAVAS------------------WSPTEVTNAGEAFAGQLDASHKNSCPWRGNSCADNLVQLH-LTQSALIGGFKDRCDGLLQFLSLPVIA----PSAIE 182
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: UPI001C4B8F1E (nuclear-interacting partner of ALK n=2 Tax=Epinephelini TaxID=1505891 RepID=UPI001C4B8F1E)

HSP 1 Score: 85.1 bits (209), Expect = 1.190e-13
Identity = 54/158 (34.18%), Postives = 71/158 (44.94%), Query Frame = 1 
Query:  178 CRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLER------LDSLLPVMRAATLSEVSL 633
            C   + E+F +R+ +++ L W  KP   SP +CARYGWIN GRD L C  C A L  + Q T                  +      T  +  S +L++QH   CPW    CP  F  +P      LLA FLER      L   LP M+   L  +SL
Sbjct:   63 CEATNKEAFFSRVESYSCLKWAGKPRTLSPLMCARYGWINIGRDMLKCSSCQAFLCASLQPT------------------LDFEKYGTRIAEISRQLQTQHEKFCPWPDFPCPERFWLVPASEPSTLLAAFLERFQRTCLLAQQLPAMKPEQLKSMSL 202
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A6A4Z8A1_9STRA (C3HC-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8A1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.140e-12
Identity = 51/157 (32.48%), Postives = 69/157 (43.95%), Query Frame = 1 
Query:  178 CRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFA-DQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLERLDSLLPVMRAATLSEVSLPSSF 645
            C P +   F+AR+ATF+ +NWF+KPA  +   CAR+GWIN+G D L+C+CC   L    D   G +G                 V E          L S H D CPW  N  PT F Q+     +  L +    +   +       LS + L  SF
Sbjct:   34 CHPNNRADFQARVATFSSINWFAKPAELNLLTCARFGWINSGPDELACKCCGQTLSCRIDSRLGPEG--------------AKKVAE-----GLRGYLTSHHLDTCPWKHNPSPTSFAQVSFWTHDSALVEVHAAIQQTIAAWPHLFLSSLVLDDSF 171
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A485L453_9STRA (Aste57867_15448 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L453_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.360e-12
Identity = 63/192 (32.81%), Postives = 86/192 (44.79%), Query Frame = 1 
Query:  130 IAAEANGARPLAD-KPT---CRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFA-DQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQL----PPMAVEDLLA---DFLERLDSLLPVMRAATLSEVS-----LPSSFEQH 654
            +  ++N A P  + KP    C P + + F+AR+ATF+ L+WF+KP   +   CARYGWINTG D LSC+CC   L    D   G +G                 V E          L   H D CPW  N  P  F Q+       AVE +LA   D   R  +  P + A+ L+++       P  F+ H
Sbjct:   29 VKTKSNEAAPHVEPKPVSNQCHPNNRKDFQARVATFSTLHWFAKPVELNLLACARYGWINTGPDELSCKCCDQTLNCRIDSRLGPEG--------------AKKVAE-----GLHVYLTDHHLDTCPWKYNPSPITFTQIRFWTQDAAVEFVLAAIKDISNRWIASSPPLDASFLAQLQGRLGVSPGDFDTH 201
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A3R7EFQ5_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EFQ5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.650e-12
Identity = 45/120 (37.50%), Postives = 58/120 (48.33%), Query Frame = 1 
Query:  178 CRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFA-DQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQL 534
            C P +   F+AR+ATF+ +NWF+KPA  +   CAR+GWIN+G D L+C+CC   L    D   G +G                 V E          L S H D CPW  N  PT F Q+
Sbjct:  465 CHPNNRADFQARVATFSSINWFAKPAELNLLTCARFGWINSGPDELACKCCGQTLSCRIDSRLGPEG--------------AKKVAE-----GLRGYLTSHHLDTCPWKHNPSPTSFAQV 565
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A6G0X425_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X425_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.090e-11
Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1 
Query:  178 CRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFA-DQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQL 534
            C P + + F+AR+ATFT ++WF+KP   +   CAR+GWIN+G D L+C+CC   L    D   G +G                 V E       ++ L S H D CPW  N  P  F Q+
Sbjct:   51 CHPNNRKDFQARVATFTTMHWFAKPVELNLLTCARFGWINSGPDELTCKCCDQTLDCRIDPRLGSEG--------------AQKVAE-----GLNAYLTSYHLDTCPWKHNPSPKSFTQV 151
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A9V203_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V203_MONBE)

HSP 1 Score: 79.0 bits (193), Expect = 2.130e-11
Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = 1 
Query:  148 GARPLADKP-TCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSSSFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDL-LADFLER 579
            GA  +A +  T RPW+ + F  R+ ++    WF+KP   SP  CAR+GWINTG DTL+C  C A       A+                  + A      + S+  +L ++H   CPW GNA P + L +P + V  +  A FLER
Sbjct:   53 GASGMASEDGTERPWNMQQFHRRVDSYNLNTWFAKPIRLSPLECARFGWINTGPDTLTCVSCKASFVVKFDAS------------------LDADQRSALAESYFEKLSTEHLVSCPWKGNATP-QSLAMPALGVAAVERAAFLER 179
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BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Match: A0A7S3GUD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUD2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.730e-6
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 1 
Query:  175 TCRPWDYESFKARLATFTPLN-WFSKPAFASPAVCARYGWIN--TGRDTLSCQCCSAQL 342
            +CRPW+Y+ +  RLATF   + WF+KPA  SP  CA  GW    + RD L CQCC A L
Sbjct:   35 SCRPWNYDDYLNRLATFRESSRWFAKPACLSPLQCALLGWSCNLSKRDCLVCQCCKATL 93
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig868.20131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LF30_ECTSI4.610e-30287.38C3HC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A446UPU7_TRITD1.130e-1430.67C3HC-type domain-containing protein n=2 Tax=Tritic... [more]
A0A453LZW4_AEGTS1.140e-1430.67C3HC-type domain-containing protein n=40 Tax=Pooid... [more]
UPI001C4B8F1E1.190e-1334.18nuclear-interacting partner of ALK n=2 Tax=Epineph... [more]
A0A6A4Z8A1_9STRA1.140e-1232.48C3HC-type domain-containing protein n=2 Tax=Aphano... [more]
A0A485L453_9STRA1.360e-1232.81Aste57867_15448 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R7EFQ5_9STRA9.650e-1237.50Dynamin-type G domain-containing protein n=1 Tax=A... [more]
A0A6G0X425_9STRA2.090e-1135.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A9V203_MONBE2.130e-1134.25Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S3GUD2_9STRA3.730e-650.85Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig868contigEcto-sp13_S_contig868:1060..5993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score845.1
Seed ortholog evalue1.7e-242
Seed eggNOG ortholog2880.D8LF30
Preferred nameZC3HC1
Model size2048
KEGG rclassRC00003,RC00336
KEGG koko:K00565
KEGG ReactionR03805
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023057,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0033036,GO:0034613,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0060548,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:1901099,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240
Exons6
EggNOG free text desc.zinc ion binding
EggNOG OGsKOG4765@1,KOG4765@2759
Ec32 ortholog descriptionBaculoviral inhibition of apoptosis protein repeat
Ec32 orthologEc-21_006510.1
EC2.1.1.56
Cds size1524
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig868.20131.1prot_Ecto-sp13_S_contig868.20131.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig868 1584..5993 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464140.2658489-UTR-Ecto-sp13_S_contig868:1059..15831681464140.2658489-UTR-Ecto-sp13_S_contig868:1059..1583Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig868 1060..1583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464140.279058-CDS-Ecto-sp13_S_contig868:1583..16401681464140.279058-CDS-Ecto-sp13_S_contig868:1583..1640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 1584..1640 -
1681464140.2890942-CDS-Ecto-sp13_S_contig868:2167..23101681464140.2890942-CDS-Ecto-sp13_S_contig868:2167..2310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 2168..2310 -
1681464140.305982-CDS-Ecto-sp13_S_contig868:2557..33161681464140.305982-CDS-Ecto-sp13_S_contig868:2557..3316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 2558..3316 -
1681464140.3218153-CDS-Ecto-sp13_S_contig868:3900..41391681464140.3218153-CDS-Ecto-sp13_S_contig868:3900..4139Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 3901..4139 -
1681464140.33951-CDS-Ecto-sp13_S_contig868:5129..52891681464140.33951-CDS-Ecto-sp13_S_contig868:5129..5289Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 5130..5289 -
1681464140.351663-CDS-Ecto-sp13_S_contig868:5827..59931681464140.351663-CDS-Ecto-sp13_S_contig868:5827..5993Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig868 5828..5993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig868.20131.1

>prot_Ecto-sp13_S_contig868.20131.1 ID=prot_Ecto-sp13_S_contig868.20131.1|Name=mRNA_Ecto-sp13_S_contig868.20131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=508bp
MPKDLEEKVVAALARFDTAVRQSNPIRLKQREEDPREIDVLERIAAEANG
ARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINT
GRDTLSCQCCSAQLRFADQATGGDGNAANGDVGGDDGGGMAAVVEPTPSS
SFSSRLKSQHHDLCPWNGNACPTEFLQLPPMAVEDLLADFLERLDSLLPV
MRAATLSEVSLPSSFEQHCPGGLSALAAKVRALWTQARSADATAAGTKAM
ASVVVTSEENSENRTAGAHKRQRSGSGNAAGSAENREILRFGDEMLGTAA
AIAMFGWQSTPATVPISVCAAVSPTGGSSSNGSTVAGADGRARATAKAPA
RLSCALCKRRLVTDNFLVLEAGPSSGVGCTAAGTGAEESPGALSSPEGQG
GSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWATVHPPVAGEEAIEGAV
PGWRLPLEAVLGWQDPSKQDQVLSTQKERGGFSDGGNGEVEGALQKVQKV
LGVLMRY*
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mRNA from alignment at Ecto-sp13_S_contig868:1060..5993-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig868.20131.1 ID=mRNA_Ecto-sp13_S_contig868.20131.1|Name=mRNA_Ecto-sp13_S_contig868.20131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4934bp|location=Sequence derived from alignment at Ecto-sp13_S_contig868:1060..5993- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGAAAGATCTGGAGGAGAAGGTGGTGGCTGCACTGGCTCGTTTTGA
CACTGCAGTCAGACAATCAAACCCAATCAGACTGAAGCAACGGGAGGAGG
ACCCCCGTGAAATCGACGTCCTTGAAAGGATTGCAGCAGAGGCGAATGGA
GCGAGGCCTCTAGCGGGTACGTGCTTCAGTGCAAGGGTTCATGAGATCTT
TGCTGTACACAGCTCGCACAGGCACTTGTGTGCAACCGCGGATTTTCAAC
TCAATTTGATGATGGTAGGTGCTCCGTCCCTCCCTCCCCCGATAGATGCC
GTGGTGCACGTCTCATCTCATCCGGAGACATACTGCTGTGCAGCAGTAGA
TAGGCAGACAAAGTAGCGGCCCCATCGCAGCATTTATTGCCGAGTTCCAC
CAAGTTCATCCTTCAGCCTATGAGGAACTACAGCAGTACACTAGTCCGCA
TATCTTGCTCATTTCACCACGATGACACACGAATAAACCAGACTACATAC
CACGCCCGTTTACGTGTAGTGTAGTCTGGATGCCGACACCGGCATCTCTC
TCGAGCGGGTGTTGTTTTGCCTGCACGCACACAACGGGTACAGCGTGGGG
TGAAACCGAATGGTAGTGGTGCGGCACCCACCCATGCTAAAGCTCTGGTG
TTGGGTGCCATCAATACACACGGCCTGCTTCGCTGCGCGACTCTCCGTCT
GCAGACAAACCCACCTGCCGTCCGTGGGACTACGAGAGCTTCAAGGCCAG
GCTGGCGACCTTCACACCGCTCAACTGGTTTTCCAAACCGGCCTTCGCGT
CCCCGGCGGTATGTGCCCGTTACGGTTGGATCAACACTGGACGGGACACC
CTTTCTTGCCAGTGGTGAGGGGAAAGCTTTTTGTGTATTTTTTCTCGCGT
TGTTTAACGGAAGGAGAGAACCGCCAAAGATGGGGGCGGTGGGGCGCGTA
TTTGGGGAAGCTTCCGGGGCTGTCTAGCATTGTAAGCAGCCCCACTGCTG
GATCAATAGGAGTCTCTCACCATCTACCAGTGTAGACTGCTGTGCACAGC
GCATACACGTAGGATTTAGAACACCGTTCATCCAACGGTGCTGTAGACGT
GAATTCTTTCTATGGGCACCCCACTTGGTGCAGACTCCGGCTTGGTATTC
GTGTCTAGGATTCAAACCCACTTGAAATGAGGCACTTTGCCTGTCCGCCA
CCAGTGGAACGAGGCTTTGCAACCACAGCGTGGTGTGTGACATTGCATCG
ATGTGTGTGCTCTCTTTCAGGAGAGATCGATTTTCTCACAGCCTCACTAC
ACAGCACCTGCGACAGAGCACTTTCTGTCTTCTTCCACCCACGGGAAGGT
GGCAAGCCCTCTCCTTACACACCAGACCCGTGGTCCCGGTCGAAACTCGG
GGCCAAGTGTTGAGATGTGCACAAATGTAAGCAGCCGCAAGTAAGAAGAG
GCAGTTCTGAGATGCGGGCCAATTTTCCGCTGCGGAAAGTAACGCGTTTC
ACGCACCGTACTTGGCTGCATGGCGTCACTACCGAAAATATGGCGGACAG
CCAACTTGCCTCAATAATAGCGGTCTTGCACCCTACTCCGGAGGAGGCAC
TAAGGTCAAGCCATCTGAGTGTGCGGCCCCCGCGACATCGCTCTGCCATT
TTTTTCCGAAGTTGCAGGTGGAAACCCGACTATTCAGGCATTTTCCACGC
AGTACTGGGCGCACCTATACCCGTAGGTGTCTGTAGATTAACAGCTCAAG
TTGAAGGCGTGCTATCTTCGGCTCCACAGCACTGCATGGCGAATTACCTC
CCTACCCGCTCTCTTTCTGTACGGCGTTTTTACCACCTTGCTTGCTCTCT
GCAGCTGCAGTGCCCAGCTGCGCTTTGCAGACCAAGCGACCGGCGGCGAC
GGTAACGCTGCGAATGGCGATGTTGGTGGAGATGATGGTGGGGGTATGGC
GGCTGTCGTCGAGCCAACGCCTTCATCATCGTTTTCATCTCGGCTCAAGT
CCCAGCACCACGACCTATGTCCATGGAATGGCAATGCTTGCCCCACAGAG
TTCCTACAGCTTCCGCCCATGGCGGTCGAAGATCTGCTGGCAGGTAAGCA
GGCATTCTCACCTGTCGTTCAAAGTGATTTTTCTTCTCATGATTTCCTGT
CAGTCAGTATATGTGGTTCTTCTGGGGGCGACTGGTCCACGGTGTGAGAT
ATTTTCACTCAGCTTGCGTTTGGGCCGCTGCGGGTGTGCTCGCATGAGGG
TGAGGTCGAAGGTTGTTTGGTTGGTCCGAGAGTCGTGGTACCCAAAGTTC
GTTTCTCGCGACTAAACCACGGATATTTTTTATCTCGTACGCCTCGCGCT
TGCTCTTACACCTTGTGTGCGCATTGGGTGATACAATTCGACAGCTCGTT
TAGCTCTGGCCTACATGTAGATGGGTTCGTGACGGCATCACAATGCTCTA
CGCGCGACGTCCCTGCACAGTGGCTCAGCCCCGAAGATATCGCCAGGGAA
AATACTACTGTAGTGCGAGACTTACACAAGGCCCCCAGCACTTCTAGACC
CTAAGAAGTCGCCCACCTTGCTCACTGTCTTAGACCGCTATTCCTGGCTG
ACCCTGATGTGCATGCGTGGTCGTGCTTCACACTCTGCGTGTCATGTAAT
GTTTCGCCGTGTCTACCCGCCCTCAAGACTTTCTGGAACGGTTGGACAGT
CTTTTGCCCGTGATGAGAGCTGCAACCCTGTCCGAGGTGTCCCTGCCGAG
CTCCTTCGAACAACACTGCCCGGGTGGGCTGTCGGCACTTGCCGCCAAGG
TGAGGGCTCTCTGGACACAAGCACGATCCGCCGATGCTACTGCTGCTGGT
ACCAAGGCCATGGCGTCGGTCGTCGTAACTAGTGAGGAGAATTCGGAAAA
TCGCACAGCAGGAGCGCACAAAAGGCAGAGGAGTGGGAGCGGCAATGCGG
CCGGTTCTGCCGAGAACCGGGAGATCTTGCGGTTTGGAGATGAGATGCTG
GGCACCGCTGCAGCAATCGCCATGTTTGGGTGGCAATCCACTCCGGCCAC
GGTACCGATAAGCGTGTGTGCTGCTGTGTCTCCGACAGGAGGCTCGTCGT
CCAACGGATCGACCGTTGCTGGTGCCGATGGACGTGCTAGAGCAACTGCG
AAAGCCCCAGCAAGGCTCAGCTGCGCCCTGTGCAAGCGCCGCCTGGTGAC
CGACAACTTCCTCGTATTGGAAGCAGGGCCCAGCTCAGGGGTTGGCTGTA
CCGCAGCCGGTACTGGTGCGGAGGAATCGCCAGGAGCTCTTAGCAGTCCT
GAGGGTCAGGGAGGGTCCGGTCGGAGTGGCAAGCGTAGACGCCTGTCGGG
AGGTGGAACTCCTTTGAAGCCGATGGATCTCGCCGTGGAACATCGCTCGT
TCTGCCCCTGGGCAACCGTTCACCCGCCCGTGGCAGGTGTGCGCGCTTGT
GAATGTTTGACTAACACAATTATGCCTGACTGTTAGGGTATCGAGCGTTT
CTCCCGAAAGCCACTACCGCGTGGACACCCAAAGTCTACGGTGTGCTTGC
TTTTGTCGTCGACTCTCGCATGGTTTCGACCATTCACGGCTGTTGGGCAC
GAGTCCGTTCCGCCTCTCGACAACATGCTTGTACCTGGGCGATCGATTCA
TTCTTCATGAACGTTGTGGTACGTGTAATGCAGGAGAAGAGGCGATCGAA
GGCGCTGTGCCCGGGTGGCGGTTGCCGTTGGAGGCGGTCCTGGGCTGGCA
AGACCCATCTAAGCAGGATCAGGTGCTGTCGACACAGAAGGAGCGCGGCG
GTTTCAGCGACGGCGGTAACGGCGAGGTGATGATGTTCAATACGGTGTAC
CTAGTAAATTGCTTCGGGCGGTTGGTGTTGTGGTCGTCGATGCAGTTCTT
TTCGTTTGTGTGCCTCGTTACTCCTGCTTGCTAGGAGGAGAGGAGTCTTG
TGACGCAGACCTGCCATGACTGTGTTTTCATTGTGTATGCTTCGCATTCG
GTTTGATCAAACACTGCTGTGATGTTGTTGACACAACGGGTAAAGGATAT
GGCATGGTCAGCATGTAGATAGGCATGCTGTTGCGCCACACTCTTGCGCC
GAGCTCATTCAGCACCGACTGGATGGGACCATATATTTTTTTTGTGGTCT
CAGCGGGTCGTCCCTTGGGCTGCTTTGAGCCCACTCTGCCCCATGAAGTG
ATTTTTCGAGCTGTTGCATGGTATTCCAGACTTGTGAATTCCTATTCCCA
ACGTAAGGAACTCGTGATTGCTTCAAATACTCGACTTTTGACGAATTGTT
GCCACTGTGTCAATGGTTGCATCTATCGCTGCACATCCGTCCCTCTCTGG
CAGGTTGAAGGAGCACTGCAGAAGGTGCAGAAGGTGCTGGGTGTCCTTAT
GCGATATTGACGCATCTGTTCCTTCTGCACGCTGCAGATGTAGCGGTCGC
GAGTGCCATGAAATTGTTACGGTAGCAGGACGATCCGTCCTGTTTGCAGC
GTTAGTCTTCTTAAGCGGGGACGATTTACATCTCGCGGCTTGTGGATTAT
CTTGCGCTGTCGCTTCCCCACGTGCTTGCTCTGGTGGGCGACTCCTAGGA
GTTATCTTTGTGTTTCGTACAAACTGCCGCATTGTTGCCACCTTTGCGGC
GGTCACCTTTGTGCTTGTCTAGGCCAACCACCCTGGTGTGCACCGTGCGT
AGTGCACCTACAATAGCACACCTTGTTGTAACGGACTAAGCAAGCTGTGC
AGCCGGTGTTGCATTGCTATTGGAACCCCGAGGTCACGAAGAGTACGGTA
GACCTCGCGCACCAGCCATTGGACATTCGTGAGGAAGAACACCTACAAAA
GTAAAAGTCTCGACGCCGTAGGACGGTACGCTTGAGAGCGCGAGGCAGGA
CGAAGGACAGGAGCACTGTACATTACACGTGGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig868:1060..5993-

>mRNA_Ecto-sp13_S_contig868.20131.1 ID=mRNA_Ecto-sp13_S_contig868.20131.1|Name=mRNA_Ecto-sp13_S_contig868.20131.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1524bp|location=Sequence derived from alignment at Ecto-sp13_S_contig868:1060..5993- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGAAAGATCTGGAGGAGAAGGTGGTGGCTGCACTGGCTCGTTTTGA
CACTGCAGTCAGACAATCAAACCCAATCAGACTGAAGCAACGGGAGGAGG
ACCCCCGTGAAATCGACGTCCTTGAAAGGATTGCAGCAGAGGCGAATGGA
GCGAGGCCTCTAGCGGACAAACCCACCTGCCGTCCGTGGGACTACGAGAG
CTTCAAGGCCAGGCTGGCGACCTTCACACCGCTCAACTGGTTTTCCAAAC
CGGCCTTCGCGTCCCCGGCGGTATGTGCCCGTTACGGTTGGATCAACACT
GGACGGGACACCCTTTCTTGCCAGTGCTGCAGTGCCCAGCTGCGCTTTGC
AGACCAAGCGACCGGCGGCGACGGTAACGCTGCGAATGGCGATGTTGGTG
GAGATGATGGTGGGGGTATGGCGGCTGTCGTCGAGCCAACGCCTTCATCA
TCGTTTTCATCTCGGCTCAAGTCCCAGCACCACGACCTATGTCCATGGAA
TGGCAATGCTTGCCCCACAGAGTTCCTACAGCTTCCGCCCATGGCGGTCG
AAGATCTGCTGGCAGACTTTCTGGAACGGTTGGACAGTCTTTTGCCCGTG
ATGAGAGCTGCAACCCTGTCCGAGGTGTCCCTGCCGAGCTCCTTCGAACA
ACACTGCCCGGGTGGGCTGTCGGCACTTGCCGCCAAGGTGAGGGCTCTCT
GGACACAAGCACGATCCGCCGATGCTACTGCTGCTGGTACCAAGGCCATG
GCGTCGGTCGTCGTAACTAGTGAGGAGAATTCGGAAAATCGCACAGCAGG
AGCGCACAAAAGGCAGAGGAGTGGGAGCGGCAATGCGGCCGGTTCTGCCG
AGAACCGGGAGATCTTGCGGTTTGGAGATGAGATGCTGGGCACCGCTGCA
GCAATCGCCATGTTTGGGTGGCAATCCACTCCGGCCACGGTACCGATAAG
CGTGTGTGCTGCTGTGTCTCCGACAGGAGGCTCGTCGTCCAACGGATCGA
CCGTTGCTGGTGCCGATGGACGTGCTAGAGCAACTGCGAAAGCCCCAGCA
AGGCTCAGCTGCGCCCTGTGCAAGCGCCGCCTGGTGACCGACAACTTCCT
CGTATTGGAAGCAGGGCCCAGCTCAGGGGTTGGCTGTACCGCAGCCGGTA
CTGGTGCGGAGGAATCGCCAGGAGCTCTTAGCAGTCCTGAGGGTCAGGGA
GGGTCCGGTCGGAGTGGCAAGCGTAGACGCCTGTCGGGAGGTGGAACTCC
TTTGAAGCCGATGGATCTCGCCGTGGAACATCGCTCGTTCTGCCCCTGGG
CAACCGTTCACCCGCCCGTGGCAGGAGAAGAGGCGATCGAAGGCGCTGTG
CCCGGGTGGCGGTTGCCGTTGGAGGCGGTCCTGGGCTGGCAAGACCCATC
TAAGCAGGATCAGGTGCTGTCGACACAGAAGGAGCGCGGCGGTTTCAGCG
ACGGCGGTAACGGCGAGGTTGAAGGAGCACTGCAGAAGGTGCAGAAGGTG
CTGGGTGTCCTTATGCGATATTGA
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