mRNA_Ecto-sp13_S_contig866.20105.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig866.20105.1
Unique NamemRNA_Ecto-sp13_S_contig866.20105.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 3.850e-150
Identity = 223/231 (96.54%), Postives = 227/231 (98.27%), Query Frame = 2 
Query:   26 MVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGILEHIVSRI 718
            MV+SQLFLGTAATLIASSAAFVAPI APRSS  RVAASST KMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSE+FHPLFMGPAYIGPAVEHAQQIATVYPLFWVAS+GMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDG+GILEHIVSRI
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILEHIVSRI 231
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 6.620e-76
Identity = 135/228 (59.21%), Postives = 169/228 (74.12%), Query Frame = 2 
Query:   26 MVSSQLFLGTAATLIASSAAFVAPIT----APRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            MV++QLFLG+AATLIASS AFVAP+     AP SS      SS LKM+AGSDY A+LPGAPFG   +GK FDP  L+   DP  IKKWREAE+KHGRV+MLA++G+LV+E +HPLFMGP YIGPAV+H Q+I+  YP FWV S+  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPL L P+D     +++++EL+ GR AMIG+ GM+VQE+++   IL
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASS------SSALKMSAGSDYVATLPGAPFG---DGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADIL 219
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.720e-73
Identity = 132/224 (58.93%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:   26 MVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            + SS +FLGTAATLIASS AFVAP+ A RS+    +AS+ LKM+AGSDY A+LPGAPFG   +GK FDP  L+   +P  IK WREAE+KHGRV+MLA VG++V+E +HPLFMGP YIGPAV+H Q+I+  +P FW  S+  +AFIE  TI  A+   SPVTG G L+ EY PGDLGFDPL L PKD      +Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    2 VASSNMFLGTAATLIASSTAFVAPM-AVRSAAPASSASA-LKMSAGSDYVATLPGAPFG---DGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADIL 220
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.370e-71
Identity = 130/226 (57.52%), Postives = 166/226 (73.45%), Query Frame = 2 
Query:   26 MVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGILEH 703
            MV+SQ+FLGTAA LIASS AFVAP+ A RS+    AAS+ LKM+AGSDY A+LPGAPF   ++GK FDP  L+    P  IKKWREAE+KHGRV+MLA++GILV+E +HPLFMG  +IGPA+ H Q+I+  +P FW  S+  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPL L P       +++++EL+ GR AMIG+ GM+ QE+V+GQ IL +
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPV-AVRSAAPASAASA-LKMSAGSDYVATLPGAPF---SDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPN 221
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.070e-70
Identity = 129/222 (58.11%), Postives = 160/222 (72.07%), Query Frame = 2 
Query:   32 SSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            SS +FLGTAATLIASSAAFV P+ A RS+    +AS+ LKM+AG+DY A+LPG      A GK FD   LA   DP  IK WREAE+KHGRV+MLA VG++V+E +HP FMGP YIGPAV+H Q+I   +P FW  S+  +AFIE  TIK A+   SPVTG G L+ EY PGDLGFDP  + PKD      +Q++EL+ GR AMIG++GM+VQE+V+GQ IL
Sbjct:    4 SSNMFLGTAATLIASSAAFVTPM-AVRSAAPASSASA-LKMSAGTDYLATLPG------ANGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDIL 217
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.210e-62
Identity = 111/222 (50.00%), Postives = 157/222 (70.72%), Query Frame = 2 
Query:   14 RSTKMVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVV 679
            R   + S+   +G A+   AS  AF+ P   P + + R   S+  +M+AGSDY ++LPGAPF   A+GK +DP GL++  DPE IKKWREAE+KHGRV+MLA+VG+LV+E FHPLF+GP YIGPA+ H ++I   +P FW  ++  IA++E + I   +  + PVTG G ++ +Y PGDLGFDPLGLAP+D  +  +++++EL+ GR AMIG+ GMIVQE+V
Sbjct:   49 RCVMVTSTGALVGMASWCFASCEAFIVPT--PTTLSARPT-STAARMSAGSDYVSTLPGAPF---ADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELV 264
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BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 7.200e-53
Identity = 114/224 (50.89%), Postives = 145/224 (64.73%), Query Frame = 2 
Query:   26 MVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            MV+SQ+F+GTAATLIASS AFVAP+ A RS TT   +S  LKM+AGSDY A+LPGAPF   ++GK FDP GL+    P  IKKWREAE+KHGRV+MLA++G++V+E                            FW  S+  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+ QE+V+   IL
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPM-AVRSVTT-TPSSPGLKMSAGSDYVATLPGAPF---SDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 191
[Close]
BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 2.470e-51
Identity = 86/158 (54.43%), Postives = 114/158 (72.15%), Query Frame = 2 
Query:  224 FDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            FDP GL+    P  IKKWREAE+KHGRV+MLA++G++V+E +HP FMGP YIGPAV+H Q+I+  +P FW  S+  +AF+E  TI  A+ T S VTG G LK +Y PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+ QE+V+   IL
Sbjct:   38 FDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 195
[Close]
BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.080e-50
Identity = 87/163 (53.37%), Postives = 113/163 (69.33%), Query Frame = 2 
Query:  218 KYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGILEHI 706
            K FDP GLA   +   IK WREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  +P FW  S+  +A IE  TI  A+   S VTG G L+ EY PGDLGFDPL L P D      +Q++EL+ GR AMIG+ G +VQE+V+   IL+ +
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNILDFL 177
[Close]
BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.090e-49
Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 2 
Query:  224 FDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGQGIL 697
            FDP GL+    P  IKKWREAE+KHGRV+MLA++G++V+E +HP FMGP YIGPAV+H Q+I+  +P FW  S+  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPL L P D     +++++EL+ GR AMIG+ GM+ QE+V+   IL
Sbjct:  234 FDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADIL 391
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig866.20105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQG7_ECTSI3.850e-15096.54Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI6.620e-7659.21Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI1.720e-7358.93Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI2.370e-7157.52Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI3.070e-7058.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI1.210e-6250.00Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE7.200e-5350.89LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI2.470e-5154.43Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI1.080e-5053.37Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE4.090e-4955.06LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig866contigEcto-sp13_S_contig866:17282..20726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score435.3
Seed ortholog evalue1.8e-119
Seed eggNOG ortholog2880.D7FQG7
Model size1354
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
Exons4
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-01_006160.1
Cds size696
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig866.20105.1prot_Ecto-sp13_S_contig866.20105.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig866 17915..20701 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464138.1523252-UTR-Ecto-sp13_S_contig866:17281..179141681464138.1523252-UTR-Ecto-sp13_S_contig866:17281..17914Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 17282..17914 -
1681464138.236156-UTR-Ecto-sp13_S_contig866:20701..207261681464138.236156-UTR-Ecto-sp13_S_contig866:20701..20726Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 20702..20726 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464138.1699634-CDS-Ecto-sp13_S_contig866:17914..180891681464138.1699634-CDS-Ecto-sp13_S_contig866:17914..18089Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 17915..18089 -
1681464138.184035-CDS-Ecto-sp13_S_contig866:18385..185281681464138.184035-CDS-Ecto-sp13_S_contig866:18385..18528Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 18386..18528 -
1681464138.2001152-CDS-Ecto-sp13_S_contig866:19131..193201681464138.2001152-CDS-Ecto-sp13_S_contig866:19131..19320Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 19132..19320 -
1681464138.2196987-CDS-Ecto-sp13_S_contig866:20512..207011681464138.2196987-CDS-Ecto-sp13_S_contig866:20512..20701Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 20513..20701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig866.20105.1

>prot_Ecto-sp13_S_contig866.20105.1 ID=prot_Ecto-sp13_S_contig866.20105.1|Name=mRNA_Ecto-sp13_S_contig866.20105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
MVSSQLFLGTAATLIASSAAFVAPITAPRSSTTRVAASSTLKMTAGSDYA
ASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAV
GILVSEIFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASVGMIAFIEGQT
IKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELD
LGRYAMIGVLGMIVQEVVDGQGILEHIVSRI*
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mRNA from alignment at Ecto-sp13_S_contig866:17282..20726-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig866.20105.1 ID=mRNA_Ecto-sp13_S_contig866.20105.1|Name=mRNA_Ecto-sp13_S_contig866.20105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig866:17282..20726- (Ectocarpus species13 EcNAP12_S_4_19m)
ATTCTCGAAGACACGCTCAACCAAGATGGTCTCCTCCCAGTTGTTCCTCG
GGACTGCCGCCACCCTTATCGCCTCATCGGCGGCGTTCGTTGCACCGATC
ACGGCGCCGCGATCGTCCACTACGCGTGTAGCTGCGTCTTCGACCCTCAA
GATGACCGCAGGCTCGGACTACGCAGCTTCACTGCCGGGTGCGCCATTCG
GAATGGCGGCCGAGGTATGCTCCCTATTTCGCTGAAGTGTTGGTTGGGTA
CCGCTGTAGATCGGAAACACTTGCGTCGTAGTTGGTTCGCGGTGTAACCC
AGGCACAGCAATTTTGCTGTCTTTCGCAATCGTTCGAGTGTCACATTTCA
TAATGACGCATCTTGTGCTGTGATGTCACAACAATCTTCTGGGTTTTATA
CTATGCTGACCAGCCATGTAGCAAAACGAGTAAAGCTTTTTTCCAGATGG
ATTCGGCTTTCATCGTAGACGTGGAAGAACAGGCAGGCATCACACGGGGA
ACTTACGCACATTAAGTGGTACATTAATGGTCTGGCATGTAGACCACACC
ATTGGTTGATGAGCCTTACGACCTGTCTGTCTAGGTCAATCTCTCATGAA
CCTCACCGTAGTCTGCTGTCATACTCACCGTGAACATCGATCACCCTCTG
ACTGCACCTCCGGAACGTATTTTACATGTGGTTGGAGGAACTGGACCCGA
TATGATGTAATCTAACACCAGAAAGGCATAAAAATTCTGCCTCTAACATC
TCAGGATTAATAGTGTCCCGTGCGTATGCTGGTAAGAGTCCTCGCGAACA
AGACAAGCGTCTACGTTGCACAGAGATACAATCATCAGCTCCCCTTCTGC
AACAAACGCTTATCATCCCCACACTCTCTAATCAATAACGAACCGCTTCC
ATATGTCGTGTTTTGCCTCCATCGCATGCCTACAGTACACGGTAAATTCA
TCACTGTACCTACAAATTATCAGCGACGCCGAGTTACGCCCTCGTTTAAT
CGTGCCCAGATTGTGATCACCTTTGACGTTGGTGTGCCAAACCACCGGGA
ACTAATGGCGTAAATTGAACTTTTCTCATAACACGTGCTCCCCTGTGTCA
TCACTAGTATGGTAAAATGCGAAGACAAGACTTCTCGCGCATGTGTGACG
GTAGATATCCCTCCAAGTTTTGGGGCGAATCTTAAGGTTGTGATTGGGAG
GAACCCAGCGGTACGCGGAATGCGAGCCTCTCCCATCAGATCCGCCATTC
TACATGCCACATCATGTGTATTTAAAAAGTACACATATTCTACAGTCACT
GGAGACCACCCGTTTACGCCGCGAATATTTTCGCGAACGCATCGAATAAC
CACCGACTCTTTCCTGCCTTTTCCTTCCTCACCCACCACTGCTCAAATCC
TGCTAGGGAAAGTACTTCGACCCAGCAGGGTTGGCTACGAATCAGGATCC
CGAGACAATCAAGAAGTGGCGCGAGGCTGAGTTGAAGCACGGCCGCGTCT
CTATGTTGGCTGCGGTGGGTATCCTTGTCAGCGAGATATTCCACCCGCTG
TTCATGGGCCCGGCGTACATCGGCCCTGCGGTGGAGCACGCTCAGGTACG
ATCACCCCTATAGGTTGTACTCCCTTGCTTTCCTCGGCGCTTTGCGCCGT
GGCCCATCAGTAGGAGACCGATCTCTGTACTGCCGGTCAATGTAGCGAGC
CACTCAAGTTACGGCTGCAGCATCAAATCTGTGATGGCCACTTGAGAAAA
GTGGCAGACGAACATGATTCTTCGTGTTCGTCTTCGTTCCCCGGTAGCCC
GATCCACCACATGCTCGGTCCTTGAAGTTGCCCCTTACACGTGAGCGTTT
TGCGGCACGGTGCATCTCTGTTCAAACCTGGGCGAAAAAACCTTGGCGAA
AGTCGTTCGTGCTCATGTGTCGCGTGCGTGGTTTTGTGGCTTCACGTTGA
TCACCCAATTCGTACTTGGCTGGTTTCGAATCTATCTCTCTGTCCCCTGT
CCCGAATGTCTTACAAATTGACGAACGGTTGTTGACCTGGATTTTAGAGG
CGGTCAAAGAAACTCATCAGGATTATTGAATCTGCGTCCCATAATCGATG
ACATCAATCTCGTGCCTACCCTTCGTTACTAATTTTTTCGTATCTTGGTT
TACGCGCCCTGACAAATCGTATGCGCTCCTTTTCTTTCCCCATTCCAGCA
AATCGCGACGGTCTACCCCCTGTTCTGGGTAGCTTCTGTAGGCATGATCG
CGTTCATCGAGGGACAGACGATCAAGGACGCGTGGGGCACTGTCAGCCCC
GTGACTGGTGTCGGAAACTTGAAAACCGAGTACTACCCGGGGTGAGTGCC
GAGCGTCTTGAATAAATATCAAGATGTAGTTCTCGGTAAGTTGCGGAGAG
TCGGACGTCCGCGCACCGGACGATAATCACATGTCGACAACTAAATGCTT
GATACTTGTCCTGGTGGCTACCTTTTTTAGAGTACTGCTGCGTTAGGCCC
GCCGAGATGATGTTCAAACTCGCAAGGAAAGAGTAGGGTCTGGTCCAGGG
ATTCGGCGTGCACCATTCAGGGCTCCCACTCCTAATGCAATGTCTGCTCT
ACCCCCTACCCTTCCCGATTCGATCGTTGCATCGCAGAGACCTTGGGTTC
GACCCGCTGGGTCTCGCGCCCAAAGACGGCGAGGACTTCCGGTTGATCCA
GTCTCAGGAGCTCGACCTCGGGCGGTACGCCATGATTGGCGTGTTGGGGA
TGATTGTTCAGGAGGTTGTAGACGGGCAGGGTATTCTGGAGCACATCGTC
TCGCGGATTTAGGCTTGTTTGTCGTGCGGTGGATGTCCTTCTCCGCCGGC
GTATTTTATATCGTGACTCCGGTGACGCGCGGGCCGAACGTTTGTTTTTG
CGCTTGTTGCCAGTTGACGTTTGTGACGTGTCTCGATGTCTTGACGGTGT
ATTCTGCGTGCGTGGAGTGATGAGTTCGTTGACCGTAGAACTGTTGTGCC
AATGTTGACGGGGCGGGCAACGGCGCGCATGGAACGAGTTGCCGTCATCA
TGTCAAAAAACGATTGTAGACTCATGGATGAACCGATTTCTACCAAGGAG
GCTGATATCACGCTCTTGCGGTGTTTCTTCTACACAGAGCTTGTGGTACC
GACGTTTCCGGTCGAAAAATCCCTCGAGTCATAAGACACGTCTGACTTGG
GGCCGTGAGAACAGAGTGGTAGCCTGGGCTTGGATGTGGCCAGAAAAAAA
ATCCGAGCGAATGGAGGTTAAGAGTGTGTTCCGTACCGCCCATTTTCGAG
TTGGGGTACAAATATAGGGTGGATCTAGAGTGTTTTCACATGCCATCTAT
GAATGAATTTAACACTGCCCCTAGCTTAAATACTCTGATGTAAGGACGAA
AGACAGCTACCAAACTGATTTGTTGAGCCTGTTACCCGCAGGGGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig866:17282..20726-

>mRNA_Ecto-sp13_S_contig866.20105.1 ID=mRNA_Ecto-sp13_S_contig866.20105.1|Name=mRNA_Ecto-sp13_S_contig866.20105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig866:17282..20726- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCTCCTCCCAGTTGTTCCTCGGGACTGCCGCCACCCTTATCGCCTC
ATCGGCGGCGTTCGTTGCACCGATCACGGCGCCGCGATCGTCCACTACGC
GTGTAGCTGCGTCTTCGACCCTCAAGATGACCGCAGGCTCGGACTACGCA
GCTTCACTGCCGGGTGCGCCATTCGGAATGGCGGCCGAGGGAAAGTACTT
CGACCCAGCAGGGTTGGCTACGAATCAGGATCCCGAGACAATCAAGAAGT
GGCGCGAGGCTGAGTTGAAGCACGGCCGCGTCTCTATGTTGGCTGCGGTG
GGTATCCTTGTCAGCGAGATATTCCACCCGCTGTTCATGGGCCCGGCGTA
CATCGGCCCTGCGGTGGAGCACGCTCAGCAAATCGCGACGGTCTACCCCC
TGTTCTGGGTAGCTTCTGTAGGCATGATCGCGTTCATCGAGGGACAGACG
ATCAAGGACGCGTGGGGCACTGTCAGCCCCGTGACTGGTGTCGGAAACTT
GAAAACCGAGTACTACCCGGGAGACCTTGGGTTCGACCCGCTGGGTCTCG
CGCCCAAAGACGGCGAGGACTTCCGGTTGATCCAGTCTCAGGAGCTCGAC
CTCGGGCGGTACGCCATGATTGGCGTGTTGGGGATGATTGTTCAGGAGGT
TGTAGACGGGCAGGGTATTCTGGAGCACATCGTCTCGCGGATTTAG
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