mRNA_Ecto-sp13_S_contig865.20089.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.080e-46 Identity = 100/162 (61.73%), Postives = 115/162 (70.99%), Query Frame = 2
Query: 290 GIEKMLYALAQKMCGTFGTCGGATLSPRRPPSTTTFWT*SLL----APATYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
G KMLYALAQK CG FGTCGGA + T +L A + YL E + +VQL TV L+Q TLRYLYR +PASD+DG+ +H AEL +FAAAILPLI+ECS DVAH VRSNS+IDSE+A +SAGFVAVKEELESIYSCLGMTCDQV
Sbjct: 562 GDGKMLYALAQKRCGNFGTCGGAD-----GITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQV 718
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: D8LDE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE2_ECTSI) HSP 1 Score: 156 bits (394), Expect = 4.990e-44 Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 2
Query: 410 LLAPATYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
++A + YL E +GR+VQL V LLQGTLRYLYR +PASD+DG+ +H AEL +FAAAILPLI+ECS DVAH VRSNS+IDSE+A +SAG VAVK+ELESIYSCLGMTCDQV
Sbjct: 64 IVAGSGYLLEGKCAEAEDAQGRIVQLMAVLLLQGTLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGLVAVKKELESIYSCLGMTCDQV 181
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 103 bits (256), Expect = 1.070e-21 Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 2
Query: 302 MLYALAQKMCGTFGTCGGATLSPRRPPSTTTFWT*SLLAPA-----TYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
MLYALA+K C F TC T T T S + YL + + +++ L V L+QG LRY Y +P + DG + AEL +F+AA+LP INEC E+VA +VR+N++I S A +S G+V +KE+LES+YSC+G++C QV
Sbjct: 202 MLYALAEKRCENFATC---TADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAG-DGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQV 356
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 2.080e-19 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 2
Query: 290 GIEKMLYALAQKMCGTFGTCGG------ATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
G +M+YALA+K C FGTC G AT T W + A L E + + ++V L V L+QG LRY Y +PA G+ E AEL +F+A+ILP I+ C V VR N+ + S A ++ G+ A+K +LE++YSC+G+TC QV
Sbjct: 1307 GDGQMIYALAEKRCENFGTCSGDTDGSDATGVSAINSELLTLWE---VGKANLLAEECTEASAVID-QIVPLMAVPLIQGLLRYTYLADPAIGTGGDKE-AAELWAFSASILPWISACDAAVGTAVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQV 1465
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.800e-19 Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 2
Query: 290 GIEKMLYALAQKMCGTFGTCGG--ATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRR-EGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
G +LY+LA K C FGTC G + + + + L + + + + + +V T+ L+QGTLRYLY+ +P ++GN + RAEL +F+AA+LP I EC VA ++R NS I + + G+VAVKE LE+ YSCLG C V
Sbjct: 427 GDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGN-KARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDV 584
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 8.560e-18 Identity = 62/160 (38.75%), Postives = 84/160 (52.50%), Query Frame = 2
Query: 302 MLYALAQKMCGTFGTCGG------ATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
M+YALA+K C FGTC G AT T W A L + + ++ L V L+QG LRY Y +PA G+ E AEL +F+AAILP I+ C V VR N+ + S A ++ G+ A+K +LES+YSC+G+TC QV
Sbjct: 1 MIYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWE---TGQANLLAGECTEASAVIDE-ILPLMAVPLIQGLLRYTYLADPAIGTGGDKE-AAELWAFSAAILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIKVQLESVYSCMGITCAQV 155
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: A0A6T1L9M0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L9M0_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 2.920e-14 Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 2
Query: 299 KMLYALAQKMCGTFGTCGGATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRR----EGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
K+LY LA K CG FGTCG ST T ++ T K + + + R+V+L +V L+QG+LRY Y+V+ G ++ RAE F+AA+LP + C A + N + + +S+GF AVK ES Y+CLG+TC+ +
Sbjct: 320 KLLYRLAVKRCGNFGTCG----------STGTGVNALIMEQFTRGKNKLLQSKCVEVVPIKRRIVELMSVPLVQGSLRYAYKVDKLQ---GGSKERAEGDVFSAAVLPRVAACDVGAAQTISDNLAYAAT-SPMSSGFAAVKAAFESTYACLGVTCEDI 464
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: F0Y9I4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I4_AURAN) HSP 1 Score: 80.5 bits (197), Expect = 1.850e-13 Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 290 GIEKMLYALAQKMCGTFGTCGGATLSPRRPPSTTTFWT*SLLAPATYLKESAPKW------RMRRE-GRVVQLTTVSLLQGTLRYLYRVNPASDHDGNT-----EHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGMTC 754
G +MLY LA+K C FGTC T + + L Y ++ K ++ E +V+ TV L+QG L+Y ++ +PA+ T + AE +FAAA+LP ++EC VA ++ +N ++ + GF KE +ES+YSC+G+TC
Sbjct: 3576 GSGQMLYQLAEKRCADFGTCVSGTSGEAK----------ANLKALAYAEQGRDKILDGDCVTVQFEFDEIVKQLTVPLVQGMLKYAFKSDPANSQGSCTSGSCPKEWAEGWAFAAAVLPQVHECDHTVASMIVANLDVMNSDPMSENGFEEFKESVESVYSCMGITC 3732
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: A0A7S0H741_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H741_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 6.890e-13 Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 2
Query: 299 KMLYALAQKMCGTFGTCG-GATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRRE-GRVVQLTTVSLLQGTLRYLYRVNPASDHDG-----NTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNID------SEYAQISAGFVAVKEELESIYSCLGMTCDQV 763
K+LY LA+K C FGTC GA S ++ F L A L ++ +R +VV+L TV L+QG LRY Y+V D +++ AE +FAAA+LPL++ C+ A V +N + + + + F AVK E++Y+CLG+TC QV
Sbjct: 52 KLLYRLAEKRCKNFGTCALGA--SGTSHVNSELF---ELFASGRDLLQNGDCSSVRPVVNQVVRLMTVPLVQGALRYAYKVGKTGGVDNIPKDQTSKNAAEGATFAAAVLPLVHACNTASADTVSANLKFGLFPTGGAVESTLYSNFTAVKTAFENVYACLGITCAQV 214
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Match: A0A7S0UJ53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJ53_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.170e-13 Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = 2
Query: 290 GIEKMLYALAQKMCGTFGTCGGATLSPRRPPSTTTFWT*SLLAPATYLKESAPKWRMRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILPLINECSEDVAHVVRSNSNIDSEYAQISAGFVAVKEELESIYSCLGM 748
G K+LYALA K C F TCG A L ++ + R+ ++ TV L+QG LRY Y + D E AE +FAA+ILP+I+ C ED A V N S+ F VK+ LES+YSC+G+
Sbjct: 320 GSGKLLYALADKRCQNFKTCGDLAKETEGTSHVNIEIFREFALGARLLSQAKCDEARVHKERIERMMTVPLIQGVLRYAYITSTDEVVDEKAE--AEGATFAASILPIIHACDEDAAQTVYENIKTQSD----GTDFAKVKKALESVYSCMGV 466 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig865.20089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig865.20089.1 >prot_Ecto-sp13_S_contig865.20089.1 ID=prot_Ecto-sp13_S_contig865.20089.1|Name=mRNA_Ecto-sp13_S_contig865.20089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp MRREGRVVQLTTVSLLQGTLRYLYRVNPASDHDGNTEHRAELCSFAAAILback to top mRNA from alignment at Ecto-sp13_S_contig865:2062..3201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig865.20089.1 ID=mRNA_Ecto-sp13_S_contig865.20089.1|Name=mRNA_Ecto-sp13_S_contig865.20089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig865:2062..3201- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig865:2062..3201- >mRNA_Ecto-sp13_S_contig865.20089.1 ID=mRNA_Ecto-sp13_S_contig865.20089.1|Name=mRNA_Ecto-sp13_S_contig865.20089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig865:2062..3201- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |