mRNA_Ecto-sp13_S_contig8637.20079.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8637.20079.1
Unique NamemRNA_Ecto-sp13_S_contig8637.20079.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: D7FS43_ECTSI (Putative: flagellar radial spoke protein 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS43_ECTSI)

HSP 1 Score: 698 bits (1801), Expect = 1.050e-251
Identity = 352/369 (95.39%), Postives = 356/369 (96.48%), Query Frame = 1
Query:   73 MSTYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR 1179
            MSTYEGSRQFLQ+ESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQ++QALFAVPDEPPEGG VVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDY+VVEGKALDETLGEFDEALQEGKDGGNR TYWVARS G EWKELPPVT A       AR IKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR
Sbjct:    1 MSTYEGSRQFLQQESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQSNQALFAVPDEPPEGGAVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYVVVEGKALDETLGEFDEALQEGKDGGNRCTYWVARSPGREWKELPPVTQAQITA---ARKIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR 366          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A835YNL7_9STRA (Putative flagellar radial spoke protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL7_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 1.140e-152
Identity = 227/369 (61.52%), Postives = 275/369 (74.53%), Query Frame = 1
Query:   73 MSTYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPI-EEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSL 1176
            M+++E +RQ LQKES+DGV LY HLA V+LKVLS++  D S  FEHLSA+VKE    P      + + +A A Q+ WA ++Q+LFAVPDEPPEGG  VPD+LDEANMW   G+SFG  ETYR++L+VK+LAE+LPG+HE+LRFWG++  R  DY+VVEG+AL+E LG+ +EA  EG  G NRYTYWV+  AG  W +LPPVT A       AR I+RY TGDL++ V GYPPFPGTE N LRAQIARITAG  VSP+GFFE D DA+P  IK AE+E+INEAFPK   +L + D WVHHE ELN LGR RP+PE  +    P   EEDPPEEV PLRSLAED EG+WGFRT PAGAG +AN+  VAKSL
Sbjct:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVA---ARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSL 366          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S2XZR7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR7_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 3.460e-140
Identity = 212/373 (56.84%), Postives = 262/373 (70.24%), Query Frame = 1
Query:   91 SRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAE-----------QLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSL 1176
            +RQFLQK S+DGVSLY HL+ VLLK+L ERPS+A+  FEH+SA VK  T++P              E           QL WA +S  LF VPDE P+     PDM+DEANMWEW G+SFGR +TYRLYLSVK LAESL  ++ESLRFWGKI TR  DY +VEG+  ++   EFD  LQEG+DG NRYTYWVA+SA   W  LP +T+        +R +++  TGDL++PV  YPPFPG E +LLRAQIARIT   CVSP GFFE+DED+E   IK+A+ E+I E+FP+ +EEL  T GW HHE ELN  GRCRPMPE LDD+G P+E+E+ PEE+ PLR+L  D EG+W FRT P GAG+SA +MVVA+S+
Sbjct:    8 ARQFLQKNSADGVSLYEHLSEVLLKILIERPSNAAESFEHISAMVKSSTIQPSKAGSITDDDELIQESRKISKQVRKKQLDWASSSLKLFKVPDEIPDAIPAFPDMMDEANMWEWAGISFGREQTYRLYLSVKTLAESLNPDYESLRFWGKINTRNGDYYIVEGRTFEDP--EFDPMLQEGRDGSNRYTYWVAKSATSGWTMLPNLTMEQIV---ISRQLRKLLTGDLDAPVWSYPPFPGQEKHLLRAQIARITHSTCVSPTGFFEMDEDSEEPLIKLADAETIAESFPRPLEELRITGGWCHHEMELNVRGRCRPMPEVLDDDGEPVEDENAPEEIEPLRTLDNDDEGAWTFRTAPGGAGESARSMVVARSM 375          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S3XSR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSR5_HETAK)

HSP 1 Score: 350 bits (897), Expect = 8.210e-116
Identity = 179/300 (59.67%), Postives = 216/300 (72.00%), Query Frame = 1
Query:  292 QLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSL-AEDSEG----SWGFRTCPAGAGQSANAMVVAKSL 1176
            QL WA  +   + V DE P+     PD++DEANMWEW GVSFGR ETYRLYLSVK LAESLP ++ESLRFWG+++ RG  Y +VEGK   E   + D   +EG+DG N+YTYW A +A  +W+ LPPVT+A       AR ++R F GDL +PV  YPPFPG E  LLRAQIARIT G  VSPAGFFE+DE++E   IK AE E+INE FPK +EEL    GW HHE ELNTLGRCRPMPE+LD+ G+PIE+ED PE V PLR+L AED EG    +W FR  PAG+G+SAN+ VVA+SL
Sbjct:   45 QLDWAGKTLKHYKVADELPDAFPAFPDLMDEANMWEWAGVSFGREETYRLYLSVKVLAESLPADYESLRFWGRVSARGGAYYIVEGKTF-EDKEDLDPEKEEGRDGANKYTYWAATAATEKWERLPPVTMAQVVA---ARRVRRLFAGDLAAPVVAYPPFPGAERELLRAQIARITHGTAVSPAGFFELDEESEEPQIKFAEAEAINEVFPKPLEELKERAGWAHHELELNTLGRCRPMPERLDENGDPIEDEDAPEAVDPLRTLDAEDEEGREEPTWTFRAGPAGSGESANSHVVARSL 340          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S1UB83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB83_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.610e-103
Identity = 180/378 (47.62%), Postives = 238/378 (62.96%), Query Frame = 1
Query:   73 MSTYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSM------GQQSAAAEQLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAE-SLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDA--EPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR 1179
            M+T E ++QF+  E   G SLY HL++V+L++L ++P DA   FEH+SA+VKE      S    +       + + A +QL WAQ + AL+AVPDEP EGG  +PD++D A M+E  GVSFG  ET+RL LS+K LAE +    +ES RFWG++ TR   + V E   +DE   E D A  EG +G N+YTY+V  S+  +W +LP V  A       A+ ++RY TGDL + V GYPPF GTE + LRAQI RITA   VSPAGF+E DEDA  EPA  K+ + E + EA P   EEL + DGWV HE  +  +GRCR +PE  +DE   + E + PE   PL +LA+D EGSW  RT P GA  +ANA VVA+SL+
Sbjct:    1 MATLEEAKQFMSMEDEAGQSLYAHLSDVILQILVDKPKDARRDFEHISAAVKEQAFAAPSPADLVDGVKKTAEPAGAEKQLAWAQAAAALYAVPDEPAEGGPALPDLMDLARMFELAGVSFGAEETFRLALSLKTLAEKNADAGYESFRFWGRVETRAGYFYVAEAPTVDEIEIE-DAAKMEGAEGANKYTYFVTPSSSADWTKLPHVNAAQLVV---AQKLRRYLTGDLAAKVPGYPPFEGTEAHYLRAQIGRITAECGVSPAGFYEADEDAGLEPAPAKIKDAEGLAEAPPTMGEELRSLDGWVRHEMLITAIGRCRALPEPEEDENGEVPELEQPEIKEPLSALADDEEGSWVLRTAPGGAAATANAFVVARSLK 374          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S3M2Q3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2Q3_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.180e-96
Identity = 175/372 (47.04%), Postives = 230/372 (61.83%), Query Frame = 1
Query:   73 MSTYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAA--EQLKWAQTSQALFAVPDEPPEG-GVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAG-GEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSL 1176
            M+T    RQ L ++ S G  LY HL   L+++L ERP +A   FE +SA+VK   + PD         SAA   + L WA+   AL   P+EPPE   V VPD+LD+AN++EW GVSFG+ E YRLYLS+KKL E+LP E E +R +GKI+TR   Y +VEG  L+    E DE+ QEGK+G N+Y YWV +S   G+W +LP V +        AR  +R FTG L++ V  YPPFPGTE NLLRAQIA I     +SP G+F++++D +P  +  AE E++ E FPK   EL   +GW HHE +LN LGR   MPE+ D+ G  IE EDP E   PL ++  ++   W FR CP G G SA + VVA+SL
Sbjct:    1 MATAAELRQILSEDPS-GKDLYGHLTETLMRILIERPKNAYDSFELISAAVKANPLNPDPENGKPLPPSAAELEKMLAWAKKCSALLKNPEEPPEDPSVKVPDLLDDANLYEWAGVSFGKGEIYRLYLSIKKLCETLPAEVEKIRLFGKISTRSLPYYIVEG--LNPEDEEADESKQEGKNGANKYAYWVTQSIEEGKWTKLPNVNMEQVV---KARLFRRLFTGSLDAAVPSYPPFPGTERNLLRAQIACIAGATSISPDGYFDLNDD-DPPQVVPAEAEAMAERFPKTSSELKDPEGWKHHEADLNRLGRVTAMPEQQDENGEVIEPEDPVEAATPLDTIKPEA---WTFRVCPGGVGSSAGSAVVARSL 362          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A813A4T5_SYMMI (RSPH4A protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A4T5_SYMMI)

HSP 1 Score: 264 bits (674), Expect = 1.350e-83
Identity = 128/242 (52.89%), Postives = 167/242 (69.01%), Query Frame = 1
Query:  334 PDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGE-WKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDP 1056
            PDEPPE  V  PD++D+  ++EW GVSFGR +TYRLYLS+K LAESLP E E LR +G I TRG  Y +VEG   ++  G  ++  QEG+ G N+YTYWV +S     W +LP VT+        AR  K+Y TG+L++P+  +PPFPG E N LR QIA I     VSPAG+FE++ED +P  +K+AE E++NEAFPK+ +EL   D WVHHE ELN LGRC  MPE+LDD G+P+E ++P
Sbjct:    2 PDEPPELNVKFPDLMDDLALYEWAGVSFGRADTYRLYLSIKALAESLPAEVERLRLFGLIKTRGQPYYIVEGLTTEDPEG-IEDTKQEGRSGANKYTYWVTQSCEANVWVKLPHVTMEQVVA---ARKFKKYMTGNLDAPISSFPPFPGNEANYLRTQIALICGATSVSPAGYFELNEDEDPPGVKLAEAETLNEAFPKSAQELKEPDAWVHHEIELNVLGRCTAMPEQLDDNGDPVEPDEP 239          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: F0YMJ9_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMJ9_AURAN)

HSP 1 Score: 270 bits (689), Expect = 3.330e-83
Identity = 160/376 (42.55%), Postives = 228/376 (60.64%), Query Frame = 1
Query:   79 TYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGT-VKPDSTTPSMGQQSAAA----EQLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPG-TEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAED--SEG-SWGFRTCPAGAGQSANAMVVAKSLR 1179
            ++E ++Q+L++E  DG SLY HL+ VLLKV+ E+P +A+A+FE LS  ++  T VKP  T P+ G+   A      QL W      L+A P E     +  PD++ EAN++EW G++FG++ETYRLYL++K+ A     E  SLRFWGKIT R  DY VV+G   D    E +    EG +G N+Y +WV   AGG W +LP  T  A      AR IKR+FTGDL++PV  YPPFPG TE +LLRAQIA IT+   +SP GF+  D++AE     + + E +++   K+ E+L     WVHHE  +N  GRC   P   ++E    E  D   ++  L ++AED  ++G +W    CP G G+S +++V+AKSL+
Sbjct:    2 SFEEAKQYLRQEDEDGNSLYEHLSRVLLKVIVEKPQNANAMFEQLSQELRGATQVKP--TLPTEGEPEIAKPEKKSQLDWCGAVSNLYA-PTEGDATEITYPDLMTEANVYEWAGINFGKMETYRLYLAIKQKAVV---EARSLRFWGKITGRSGDYFVVQGDNPDPPSAE-EITTVEGAEGANKYAFWVCTYAGGTWTKLPDTTPEAIVV---ARQIKRFFTGDLDAPVPSYPPFPGGTEAHLLRAQIAMITSECSISPGGFYAEDDEAEEGIKAIKKVEEMDDF--KSAEDLKDASNWVHHEVPINVNGRCNQPPANEEEEDG-AEPSDELPDLPLLGAIAEDEITDGPAWSISVCPGGTGESPDSVVIAKSLK 364          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S3K2B4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2B4_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.270e-80
Identity = 153/372 (41.13%), Postives = 220/372 (59.14%), Query Frame = 1
Query:   79 TYEGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALD--ETLGEFDEALQEGKDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPG-TEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCR--PMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR 1179
            ++E ++QFL++E   G SLY HL+ VL+K++ E+P++A+A+FE LSA ++    +  S T S  ++S   +QL W QT   L+   +E  E     PD++ EAN+WEW G++ G+ ETYRLYLS+K  A S   E   +RFWGKI T   DY++ +    +  ET  E      EG  G N+Y +WV + AG  W++LP VT +A      AR IK++FTG+L +PV  YPPFPG TE +LLRAQIA ITA  CVSP G++  DE A    IK  +     E F K+ +EL     W HHE  +N  GRC   P P+  D++  P   ED P+   P+ +  +  +  W F   P GAG+S +++++ KSL+
Sbjct:    2 SFEEAKQFLRREDESGSSLYEHLSKVLMKIIIEKPANANAMFEQLSAELRTNVTEKSSMTRSRPEKS---DQLAWCQTVAKLYENENEIEETATF-PDLMTEANIWEWAGINLGKNETYRLYLSLKAKALS---EGIKIRFWGKIQTYNGDYLIAQADHPEPPETSLEI-----EGIQGTNKYIFWVCKHAGDTWEKLPDVTPSAI---TTARQIKKFFTGNLSAPVNSYPPFPGSTEAHLLRAQIALITADCCVSPVGYYVEDEAAAEDGIKAIQKAEEIEEF-KSAQELKDPANWTHHELAINLNGRCNQLPPPDDEDEDNTPATSEDLPD--LPVLATLDSDQIGWKFYPAPGGAGESPDSIIIVKSLK 355          
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Match: A0A7S1CKG8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKG8_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.060e-74
Identity = 161/379 (42.48%), Postives = 215/379 (56.73%), Query Frame = 1
Query:   85 EGSRQFLQKESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSA-----AAEQLKWAQTSQALFAVPDEPPEG---GVVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYIVVEG---KALDETLGEFDEALQEGK-DGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAE-PASIKVAEDE----SINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPA-GAGQSANAMVVA 1167
            E ++ FLQK+S   VS+Y HL  ++LK+++++P DA  VFEHLS  VK+ T    +  P+ G +S      AA   +WA  +  +F+ P EP EG      V D+ DEAN  EW GV+ GR E +RL+L++K LA S P ++  +RFWGK+   G DY V EG   +  +E   + D  + E   +G NR+ YW    AGG W  LP VT A     R A AI+R+F+GDL++ V G+PPFPG E   LRA IARITA   +SPAG F   ED + P  I   E+E    ++NEA             WVHH   LN LGR  P P K+D+EG PIE+ D PE  A L ++ E+ EG W  R  PA G  + A   +VA
Sbjct:    9 ERAKAFLQKKSGP-VSVYDHLTELILKLITDKPDDAVGVFEHLSGLVKQNTFS--AAAPAEGGESKVDAADAAATAEWAAAAGKIFSAP-EPAEGVDEPGAVQDLTDEANYLEWAGVNIGRTEAFRLHLALKALAASTPVQN--VRFWGKVLGTGGDYYVAEGTLEEEGEEGAADADGTVHEAPGEGANRFAYWACSFAGGAWTRLPNVTPAQV---RAAGAIRRFFSGDLDASVGGHPPFPGKEKEFLRATIARITAATVISPAGVFAASEDEDKPYDIVPNEEEFEIPALNEA-----------GSWVHHLLPLNKLGRTTPNPPKVDEEGEPIEDPDAPEPPAVLGTI-EEEEGQWSIRGLPASGMAEGAEPGLVA 366          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8637.20079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS43_ECTSI1.050e-25195.39Putative: flagellar radial spoke protein 4 n=2 Tax... [more]
A0A835YNL7_9STRA1.140e-15261.52Putative flagellar radial spoke protein 4 n=1 Tax=... [more]
A0A7S2XZR7_9STRA3.460e-14056.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XSR5_HETAK8.210e-11659.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1UB83_9STRA1.610e-10347.62Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3M2Q3_9STRA2.180e-9647.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A813A4T5_SYMMI1.350e-8352.89RSPH4A protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
F0YMJ9_AURAN3.330e-8342.55Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
A0A7S3K2B4_9STRA1.270e-8041.13Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1CKG8_9STRA2.060e-7442.48Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8637contigEcto-sp13_S_contig8637:134..4813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score704.5
Seed ortholog evalue2.8e-200
Seed eggNOG ortholog2880.D7FS43
Preferred nameRSPH4A
Model size1182
KEGG koko:K19756
Hectar predicted targeting categorysignal peptide
GOsGO:0000226,GO:0001534,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0031974,GO:0031981,GO:0032838,GO:0032991,GO:0035082,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0070013,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons7
EggNOG free text desc.microtubule-based process
EggNOG OGs28KDA@1,2QSU4@2759
Ec32 ortholog descriptionFlagellar radial spoke protein 4
Ec32 orthologEc-16_004420.1
Cds size1182
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8637.20079.1prot_Ecto-sp13_S_contig8637.20079.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8637 134..4813 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464136.3225684-CDS-Ecto-sp13_S_contig8637:133..2501681464136.3225684-CDS-Ecto-sp13_S_contig8637:133..250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 134..250 -
1681464136.3337224-CDS-Ecto-sp13_S_contig8637:674..7441681464136.3337224-CDS-Ecto-sp13_S_contig8637:674..744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 675..744 -
1681464136.3453379-CDS-Ecto-sp13_S_contig8637:1495..16021681464136.3453379-CDS-Ecto-sp13_S_contig8637:1495..1602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 1496..1602 -
1681464136.3542836-CDS-Ecto-sp13_S_contig8637:1919..20931681464136.3542836-CDS-Ecto-sp13_S_contig8637:1919..2093Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 1920..2093 -
1681464136.3630524-CDS-Ecto-sp13_S_contig8637:2327..25821681464136.3630524-CDS-Ecto-sp13_S_contig8637:2327..2582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 2328..2582 -
1681464136.3720734-CDS-Ecto-sp13_S_contig8637:3023..33171681464136.3720734-CDS-Ecto-sp13_S_contig8637:3023..3317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 3024..3317 -
1681464136.3811014-CDS-Ecto-sp13_S_contig8637:4648..48131681464136.3811014-CDS-Ecto-sp13_S_contig8637:4648..4813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8637 4649..4813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8637.20079.1

>prot_Ecto-sp13_S_contig8637.20079.1 ID=prot_Ecto-sp13_S_contig8637.20079.1|Name=mRNA_Ecto-sp13_S_contig8637.20079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=394bp
SGGRLHKGACLLSLFFWLLLSGQNMSTYEGSRQFLQKESSDGVSLYTHLA
NVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLK
WAQTSQALFAVPDEPPEGGVVVPDMLDEANMWEWGGVSFGRLETYRLYLS
VKKLAESLPGEHESLRFWGKITTRGDDYIVVEGKALDETLGEFDEALQEG
KDGGNRYTYWVARSAGGEWKELPPVTVAASPGERNARAIKRYFTGDLESP
VQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAED
ESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEE
DPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLR*
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mRNA from alignment at Ecto-sp13_S_contig8637:134..4813-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8637.20079.1 ID=mRNA_Ecto-sp13_S_contig8637.20079.1|Name=mRNA_Ecto-sp13_S_contig8637.20079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4680bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8637:134..4813- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGGGGTAGGCTGCATAAAGGAGCGTGCCTGCTCTCTCTCTTTTTCTG GCTCTTGCTCTCTGGTCAAAATATGTCCACCTACGAAGGATCGAGGCAGT TCCTGCAGAAGGAGTCGAGCGATGGAGTGTCGCTGTACACTCACCTGGCC AACGTTTTACTGAAGGTGCGTACGGTCCATGTTAGTGGCGATGCATTTTC AAGCGCAACGTTGGAGGCTGTCTGTGTAAGATTGACAAAAACGATTGAAT TTTTCGTTGAATTTTCGACCTGATTCTAGAGCACGCCGTGCCACTGCTCA TGCCCCTTGCCCCAACTGCCTCTCCTCGTTTGTTGCTCAAGTCTCAAATT ATGTTCATGTACTCAAAGGACGTCGTCCTCGCGTGACATGAAACTGGATT TAGAGTGTGCCCACGTGGGGGCGATTTTTCCTTTTGCACGTATCACGTGT TGCGACACCATGCCAACCCTGTCGTGACCACACGTCTGCATCATTAAGTT TCGTGCTGCGGCAATGAGGCGTACTGGCGTCCTACGCGTGGTCGTCACAG CCTGTGATGTGTGCTCATGTGGATGATGTCGTATGGCTGTGGCACTGGCC GGCACGTACCGGGTGCTGCGGTGGAAATGGGGAATCACCTCGTCACAAGG CACGAAGCGTCACATCGCCAATGCAGCACCCTACAGCATGTACCTGGCAC AGACCTACATGTATCACATTCATGTACCTGGCACACTCTGTCAAGTTTGA TCTCGTGTGATGGACCAGTCAGTGCGATGTGGGCGCTGCGGCCGGGCTTT GCTGTGTACAATGTAGAAGTAGAATACCTTCCACACGGCTCTACGAATCG CGCATCCTCTCATCACATTGAAATTTCGTGTGTACTGATACTGCTGCTGC TGTAGACGAACTCGGGTCCCAGACGAGTCGACGCCGAATCACTGCTGTAC TCTACACGGCCGACTTACCTTCTGTGCACAACATGCACTGTTAGTGTCGG TCACATCAAATGGGTACGTGCCACGTATGACCTGTGGCGGGACATTGCAG TGCACAGTACATACGACCCAGCTCCACGGATCATGCCTATCTTCTCATCA TTAATGCATCAATAGTTTACGTACAACAGCTGCTGTAGACTCCGGCCGAA GAAAAAACCGACACCGACTTGCTGTACACACGCATTTTGTCTCGTCGGCG GCGAGAAAAACAGTATCGAGCAGGTAAGAAGCACGGAACTGCCGGTAGTC AGTGTCGAAGGCCACGAAGGCGTCGCCGTCACAGCCGAATATCTCTTCGA GTACTGCCGAACCACGGTGATCATCGCTCTACACTATACCAATTGTGTGC AAAACATTTCCAAAGATGGGACGAGAAAGACGAAAAGACCTCAATGGTCT CCCTCCCTCTCTCCCGCCCTCTCTCTCTCTTTCTCTCTCGCTCGCTCGCT GGTGGCCCCTATCCCCTGGGCCTTCCCATCTGGCCCCTCAACCCAGGTTC TGAGTGAGAGGCCGTCAGATGCGTCAGCGGTCTTCGAGCACCTCAGCGCC TCCGTCAAGGAAGGCACGGTGAAGCCGGACAGCACGACGCCGTCGATGGG CCAACAGTCGGCCGCGGCGGAGCAGCTCAAGTGGGCGCAGACCAGCCAGG CGCTTTTCGCCGTGCCCGACGAGCCTCCGGAGGGGGGAGTGGTGGTGCCC GACATGCTAGACGAAGCCAACATGTGGGAGTGGGGAGGGGTGTCATTCGG GCGACTGGAGACGTATCGCTTGTACCTCTCCGTAAAAAAGGTGTGGGTGT TGTTGAAATAACGTTGCCTCGTTGTTCTTCCAACATGACCGTTTTAAGTG TCGGATGCATTTGTTCCTTGCTTCGAGATGGGGGAAATCACTACGACAAA GAATTTCGTCCACCTTGTGCTTCTCCAAGGGGCCTGTGCCATCAAGTCCT GCGCAAACTAACACCACTACATCTTGTGCTTCTAGCACACATAGGGGCTG GAGCAAGGAGCCTTAGGGGTATAATCGCCCGCCATTGTCTCTGCCGAAAA ATTAACTTGCGGTCACAGTTGTTGACCCATCTGCAAACAAGCCAAGCTTT TGCTCCACCGAAGAACTCCCACCTAAGAAAAGAAAGGCGACAACTTTGAA CGGACTTGCCCCCGTCGCTCGAACTCTGAGCCAAAACCAAATCCTGCCTC CCGACGCACCACTCTGACGCTGCCATCCCAGCTTGCCGAATCTCTTCCCG GCGAGCACGAGTCCTTGCGGTTCTGGGGCAAGATCACGACGAGAGGGGAC GACTACATCGTGGTGGAAGGGAAGGCACTAGACGAGACGTTGGGAGAGTT CGACGAGGCTTTGCAGGAGGGCAAGGACGGGGGGAACCGCTACACCTACT GGGTGGCGCGCTCCGCCGGCGGGGAGTGGAAGGAGCTCCCGCCTGTTACC GTTGCGGCGTCCCCCGGGGAACGGAACGCCCGCGCCGTGGGCGGGTGGGC CGTGGTTGGGCTGGTTTTGGGTGGCCGGGGGGGGGGGGGGGGGACGGCCC AGAGTACAGGCAACCCTTCAGAATTACAACGCAGAGATTGTTGATGTCGA GCAGGCGGCCCGTTGGGTCTACAACACGAGTCACACACATGCGATAAAAG GAAACGGCCGGCCTGCTCGTGCTACCCATGCCGGTAAAAGAAAAATACGA TGTTTCCAAAACGTCCCTAGATCAAGCGCTACTTTACGGGAGACTTAGAG TCGCCCGTCCAAGGGTACCCGCCCTTCCCGGGGACCGAGATCAACCTTCT GCGGGCCCAGATCGCGCGCATCACTGCCGGAGCTTGCGTAAGCCCCGCTG GGTTCTTTGAGGTTGATGAGGACGCAGAGCCGGCCAGCATTAAGGTGAGG ACGTGTGGTTGTAAAGGCATCACGTTGGTAGTGGCGTTCTTTTTTGACAA CTTAGACAATTTCTTTGAAACCTTGCCTGCGGATAGGAACGTTCTGGGAG CCCTCGAAAACTAAAAAAAGGGCACCGGGGATTGGGTACGTTCTCAGCCA GTCGCACTACATCACGGCACAAGCCTGCTCGAAAATACGTTGTCGTTGTA GATGCTAATATCGTCCCCCTTTTGAGATACATCTCGAGCTTAAGGCATGT ATGACTTTCTTCGAATCACGCGCCCGTTTGCTGACGAACTGTCATGTTAA CGTCGAAAAAGGTAGCTGAGGACGAATCGATCAACGAGGCGTTTCCGAAA GCGGTGGAGGAGCTCATGACGACGGATGGCTGGGTGCACCACGAATTCGA GCTCAACACGCTTGGCAGGTAAAACGTTTGACTCTTATGAATCCATCAAT CACGTGTTTGTTGTACATTCGCTGCTACCGCTGCTGTTGATGTTGTTGTG GCCATCGTCTTTCCTGGTATTTGCAGACTAGGTACCATAAAACACGTTGG ATTACCAGGTGCATCTTCTGCAACCTGCGCCTTTCATCCTCCCTTCAACA GCAATCGCGATTTCTAGTCGAAAGGGCCCAAACACATGAGTAATTTGATC GATCCAAAATCGAGCTCAAATGACACACGGAGAACGCTCGAGCCTGCCAC CACTGAGGTATTGTGGCCCAGTCCACTTACCCGGGGGGGGGGGTCACGTC TGTCTGCCGGTACCCACGCACTACGGGTAGCAAGAAGGGGTGGGAGACCG CTAAGAGTTAGGTGTGGCTAGACAAAGTAGGAAATGTGTTTACTCTGTCT TGGCAAGTTCAACAAAATAACAAGAGCATATTCCCATAGTACAGACGGGG TTTCCGAACCTTCCTTACAAGGACTTCAACCCCCCCCCCCCTCACATTCA GTCCACTCTACGGCAGTCGTCACTGAAAGCTCATTTTCCAACAAGTCACT GGAGGCTTCTGAGGATAGCAGTCTACTGGTTGGGATGCTTTCTCTTCGTT CTCTATCGAACATGGCGTCATTCCCCATCTTCCTCTCTCCTCTGCGGAAA CACTGACGACAATGTTTGTAACGTGACAACAATCGCCACCGCCACAACAA CAACGACAACAACCGAAAGGTGTCGGCCAATGCCCGAGAAGCTCGACGAT GAGGGCAACCCTATCGAAGAAGAGGACCCTCCCGAAGAGGTATGACAAGT ATGTACGCGTGTGAAGTCGACGGGCGTCGATCCAAGCGGTGCAGTCATGG TACGCTTTAGTGCGCATGGCGCTCGTTGCGCTACTCAGATGGATCGCCAT AAGAAAAAGAAGTTCTTGGGGCGCCGTTCTGGGTTCGCCACTTCCTGAAC ATGTGTCCCCGACCGGCGTGATCACCAAAAATTCAGGAAGGTTCTACACC GATCTGTATGATGATCCTGAAAAGTAGTGATAGCTGTCTCCCAGGTAGCT CAACAAGACATACCACATCTCAAAACTCTGCCCCACCCCACTCAGAGTCT AAGGTGTCTTTCAGAGGAGGACGAAAACTGCGCCGCTTGTTCTCGCGCAA TCCTATCCAGTCGTCATGTAGTTACCGGTCGGCCGGTCAACCCGCGTGTG CACTTTTGTGCAGGTTGCGCCTCTCCGATCCCTCGCGGAAGACTCGGAGG GGTCGTGGGGGTTCAGAACATGCCCTGCGGGAGCAGGGCAATCGGCCAAC GCGATGGTCGTGGCCAAGTCTCTCCGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8637:134..4813-

>mRNA_Ecto-sp13_S_contig8637.20079.1 ID=mRNA_Ecto-sp13_S_contig8637.20079.1|Name=mRNA_Ecto-sp13_S_contig8637.20079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8637:134..4813- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGGGGTAGGCTGCATAAAGGAGCGTGCCTGCTCTCTCTCTTTTTCTG
GCTCTTGCTCTCTGGTCAAAATATGTCCACCTACGAAGGATCGAGGCAGT
TCCTGCAGAAGGAGTCGAGCGATGGAGTGTCGCTGTACACTCACCTGGCC
AACGTTTTACTGAAGGTTCTGAGTGAGAGGCCGTCAGATGCGTCAGCGGT
CTTCGAGCACCTCAGCGCCTCCGTCAAGGAAGGCACGGTGAAGCCGGACA
GCACGACGCCGTCGATGGGCCAACAGTCGGCCGCGGCGGAGCAGCTCAAG
TGGGCGCAGACCAGCCAGGCGCTTTTCGCCGTGCCCGACGAGCCTCCGGA
GGGGGGAGTGGTGGTGCCCGACATGCTAGACGAAGCCAACATGTGGGAGT
GGGGAGGGGTGTCATTCGGGCGACTGGAGACGTATCGCTTGTACCTCTCC
GTAAAAAAGCTTGCCGAATCTCTTCCCGGCGAGCACGAGTCCTTGCGGTT
CTGGGGCAAGATCACGACGAGAGGGGACGACTACATCGTGGTGGAAGGGA
AGGCACTAGACGAGACGTTGGGAGAGTTCGACGAGGCTTTGCAGGAGGGC
AAGGACGGGGGGAACCGCTACACCTACTGGGTGGCGCGCTCCGCCGGCGG
GGAGTGGAAGGAGCTCCCGCCTGTTACCGTTGCGGCGTCCCCCGGGGAAC
GGAACGCCCGCGCCATCAAGCGCTACTTTACGGGAGACTTAGAGTCGCCC
GTCCAAGGGTACCCGCCCTTCCCGGGGACCGAGATCAACCTTCTGCGGGC
CCAGATCGCGCGCATCACTGCCGGAGCTTGCGTAAGCCCCGCTGGGTTCT
TTGAGGTTGATGAGGACGCAGAGCCGGCCAGCATTAAGGTAGCTGAGGAC
GAATCGATCAACGAGGCGTTTCCGAAAGCGGTGGAGGAGCTCATGACGAC
GGATGGCTGGGTGCACCACGAATTCGAGCTCAACACGCTTGGCAGGTGTC
GGCCAATGCCCGAGAAGCTCGACGATGAGGGCAACCCTATCGAAGAAGAG
GACCCTCCCGAAGAGGTTGCGCCTCTCCGATCCCTCGCGGAAGACTCGGA
GGGGTCGTGGGGGTTCAGAACATGCCCTGCGGGAGCAGGGCAATCGGCCA
ACGCGATGGTCGTGGCCAAGTCTCTCCGGTGA
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