mRNA_Ecto-sp13_S_contig862.20053.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A6H5K7T3_9PHAE (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7T3_9PHAE) HSP 1 Score: 543 bits (1399), Expect = 1.050e-185 Identity = 260/269 (96.65%), Postives = 262/269 (97.40%), Query Frame = 2
Query: 272 HTLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAVLGWVPCSFYLGPQRGLNVGCTD 1078
HTL GTNCYLVGNGARRILIDTGEGKA FVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKY PTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSL+RVRDMSP YEGGF RLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMN LTAAKGRTLSA QITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAVLGWVPCSFYLGP+RGLNVGCTD
Sbjct: 39 HTLQGTNCYLVGNGARRILIDTGEGKAGFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKYDPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLRRVRDMSPKYEGGFTRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNALTAAKGRTLSAFQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAVLGWVPCSFYLGPERGLNVGCTD 307
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: D7FQG0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG0_ECTSI) HSP 1 Score: 525 bits (1351), Expect = 6.730e-178 Identity = 264/343 (76.97%), Postives = 280/343 (81.63%), Query Frame = 2
Query: 50 MAYLLSSASFLASAFVSSALQFFSRSIRASPLLHQAVKVLDRGKAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAVLGWVPCSFYLGPQRGLNVGCTD 1078
MA LLSSAS ASA VS+ LQF SR +R SPL H VK LDRGK KV HTL GTNCYLVGNGARRILIDTGEGKA FVPHLLDVM+QAGCEMLDAILLTHWHADHVGGV++IRKALGGNI VFKK+ P VQDFDYS I +GQLFRTTGATLEAVSTPGHT DHV+ VL EEKAL GD++LGCGTAIFDDF SYMDSLQRVRDMS YEGGF RLYCGHGPVVEAAQEKIEYYIKHRQEREAQI+N LTAAKGRTLSALQITVRVYG +PLPIFVSAHYNVLHHLSKL EG+ VLGWVPCS+ +GP+RGLNVG TD
Sbjct: 1 MACLLSSASCAASALVSTVLQFVSRFMRVSPLFHTVVKTLDRGKTKVPRGTPYLAPWAVESDLIVRVLALNPGGHTLQGTNCYLVGNGARRILIDTGEGKAGFVPHLLDVMKQAGCEMLDAILLTHWHADHVGGVSEIRKALGGNISVFKKFCPRVQDFDYSIIGEGQLFRTTGATLEAVSTPGHTEDHVSLVLHEEKALIAGDLLLGCGTAIFDDFTSYMDSLQRVRDMSRKYEGGFTRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIINALTAAKGRTLSALQITVRVYGAVPLPIFVSAHYNVLHHLSKLASEGKVVLGWVPCSYCIGPERGLNVGRTD 343
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A835Z429_9STRA (Zn dependent hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z429_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.730e-73 Identity = 154/349 (44.13%), Postives = 191/349 (54.73%), Query Frame = 2
Query: 95 VSSALQFFSRSIRASPLLHQAVKVLDRGKAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLH---GTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFK------KYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRV------------RDMSPNYEGGFIR--------LYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGR----------------TLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGR 1006
VS A+ F +R SP H+ ++++++G KV HTL GTN YLVG G RR LIDTGEGK ++P L VM++ GC L+ ILLTH HADH+ GV DI +ALG +PV+K K P F+YS I DGQ+F T GATL A+ TPGHT DHV+FVL+EE ALF GDMILGCGTA+FDD SYM +L V +D S +Y GHGP V A KI+ YI+HR ERE+QI+ L+ + LS+LQIT R+YG LPL + VSAH+NV HL KL EGR
Sbjct: 13 VSWAISFIDSMLRTSPAFHKLLELVNKGGNKVPRGLPYVPTWKRESTGVVMINGLNPGSHTLQALPGTNTYLVGTGGRRWLIDTGEGKKSYIPLLTSVMKEVGCTGLEGILLTHHHADHILGVPDILQALGP-VPVYKMKDVPDKRAPCT--FEYSDIADGQVFATQGATLRALRTPGHTSDHVSFVLQEEGALFAGDMILGCGTAVFDDVTSYMATLNNVARLCASPPDTNTQDSSATSAASDASQDKQLCTVIYPGHGPAVADAARKIQQYIRHRNERESQIVAALSGSSSXXXXXXXXXXXXXXXXSALSSLQITRRIYGALPLAVLVSAHHNVEQHLRKLRAEGR 358
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A7S2SI20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI20_9STRA) HSP 1 Score: 224 bits (571), Expect = 3.560e-62 Identity = 114/255 (44.71%), Postives = 159/255 (62.35%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFK--KYGPTVQDFDYSG----------IEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREG 1003
TL+GTN YLVG G RRILID+GEG+A ++P L M +AGCE L+AIL TH H DH+GG+ + ALG +P +K + GP ++ Y+ +EDGQLF T GATL+ V TPGH+ DH F+L EE ++F GD +LG G++ F+ YM SL+R+ + + GF LY GHGP V A+ K+ YI+HR+ RE QI+ L +++ T +LQ+ +Y +P IF +AH NV HL + + G
Sbjct: 113 TLNGTNTYLVGTGKRRILIDSGEGRASYIPLLEKAMAEAGCEELEAILCTHRHYDHIGGLESVYAALGKRVPTYKCTREGPEWSEYKYNSHEPSTVEFLHLEDGQLFETEGATLQTVLTPGHSEDHACFLLLEEPSIFAGDNVLGHGSSWFEVLDDYMASLRRMAALIKKHSPGFQLLYTGHGPEVAHAERKVTEYIRHREAREEQILQVLRSSRRGT--SLQVARTIYPSVPTSIFFAAHSNVRSHLFSMEKRG 365
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A0L0HTP4_SPIPD (Lactamase_B domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HTP4_SPIPD) HSP 1 Score: 216 bits (550), Expect = 2.470e-60 Identity = 115/255 (45.10%), Postives = 157/255 (61.57%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGG--NIPVFKKYGPTVQD-----FDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTA----AKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGR 1006
TL GTN YLVG G RRILIDTG G A+F HL + +AG + +I+ TH H DH+ G+ + GG +IP++K T D ++Y+ I DG +F+T GATL AV TPGH DHV L EE A+F+GD +LG GTA+F++ A YM SL+R+ ++ P RLY GHGPV+E +KIE YI+HRQERE QI+ L +K S+ Q+ +Y P ++ +A ++LHHL+KL EG+
Sbjct: 30 TLQGTNTYLVGTGHRRILIDTGSGVADFEEHLRTSLTRAGGIGISSIICTHRHMDHISGIPQVLALHGGADHIPIYKYL--TANDIPPFPYEYTAIRDGHIFKTEGATLRAVHTPGHLDDHVVLYLEEENAVFSGDCVLGQGTAVFENLAEYMSSLRRIMELQPG------RLYPGHGPVIENGVQKIEEYIRHRQEREEQIVALLNTNPPGSKDGAWSSRQLVETIYASYPQSLYDAAEGSLLHHLNKLLSEGK 276
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A0N5AMR1_9BILA (Lactamase_B domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AMR1_9BILA) HSP 1 Score: 214 bits (546), Expect = 1.510e-59 Identity = 116/250 (46.40%), Postives = 156/250 (62.40%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGE-GKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGN-IPVFKKYGPTVQDFD--YSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAV 1012
TL GTN YLVG+G RILIDTGE K ++ L DV++ + AI+ THWH DHVGG+ D++ + GN IPV+K P ++ D Y IEDG + + G TL +++PGHT+DH++ EE +LF GD ILG GT IF+D +YM SLQR+ D P+ R+Y GHGPV+E EKI YI HR RE QI++ L+ K TLSA++IT VY L + + A NV HL+KL +E + +
Sbjct: 59 TLQGTNTYLVGSGPSRILIDTGEKNKPAYISELRDVLKD---NKISAIICTHWHDDHVGGIKDVKDKISGNDIPVYKFKNPNGREDDSVYKYIEDGAIIKVPGTTLRVIASPGHTMDHISLYFEEEGSLFCGDCILGEGTTIFEDLYTYMQSLQRLLDTKPS------RIYSGHGPVIENGIEKINEYITHRNRREEQILSALSGDK--TLSAMEITNVVYPTLSWSMKLGALNNVNQHLTKLIKEKKVI 297
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A8H4IVN4_9PEZI (Putative metallo-beta-lactamase domain protein n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4IVN4_9PEZI) HSP 1 Score: 211 bits (537), Expect = 1.280e-58 Identity = 115/246 (46.75%), Postives = 151/246 (61.38%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLS--ALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGR 1006
TL GTN YLVG G R+LIDTG+G + ++ L V+R+ +D +LTHWH DHV GV D+ + L + ++K D D I DGQ F+T GATL A +PGHT DH+A VL EE A+FTGD +LG GTA+F+D A+YMDSL R MS + G R Y GHGPV+E + K+ YIKHRQERE Q++ L G T S ++QI +Y +P + +A +L L KLT EG+
Sbjct: 30 TLQGTNTYLVGQGPNRLLIDTGQGMSAWITSLKQVLREENAS-IDHAILTHWHPDHVKGVPDLLE-LSPSTKIYKNQ----PDEDQLDIADGQRFQTDGATLRAFYSPGHTTDHMALVLEEEDAMFTGDNVLGSGTAVFEDLATYMDSLAR---MSQQFSG---RAYPGHGPVIENGKSKVLEYIKHRQEREVQVLEALAKPNGETASWKSMQIVKEIYKDVPETLHEAAQRGILQVLDKLTDEGK 263
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A090LN34_STRRB (Beta-lactamase-like protein 2 n=1 Tax=Strongyloides ratti TaxID=34506 RepID=A0A090LN34_STRRB) HSP 1 Score: 212 bits (539), Expect = 1.410e-58 Identity = 109/247 (44.13%), Postives = 161/247 (65.18%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQA-GCEMLDAILLTHWHADHVGGVNDIRKALGGNIPVFKKYGPTV----QDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTRE 1000
TL GTN YLVG+G +++LIDTGE +P +D++++A G +D+I++THWH DHVGG+ DI K NIP++K P + Q Y+ +EDG + +T GATL+ ++TPGHT+DH L EEKALF+GD +LG GT++F+D +YM+SL + ++P +Y GHGPV+++ ++KI YIKHR +RE QI+ L + T ++ IT VY + L + + A NV +HLSKL +E
Sbjct: 57 TLLGTNTYLVGSGEKKVLIDTGEKN---IPKYIDLLKEALGTCKIDSIIITHWHGDHVGGIPDILKITNKNIPIYKIKRPDIEVENQSELYNYVEDGYIIKTDGATLKMIATPGHTMDHAVVYLEEEKALFSGDCVLGEGTSVFEDLYTYMNSLNILLSLNPEI------IYPGHGPVIKSPKDKITEYIKHRNQREEQILKCLEGKEYMT--SMDITNNVYTDINLSVKIGAWNNVRNHLSKLLKE 292
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: F1KX50_ASCSU (Beta-lactamase-like protein 2 n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KX50_ASCSU) HSP 1 Score: 209 bits (531), Expect = 1.990e-57 Identity = 114/248 (45.97%), Postives = 157/248 (63.31%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGEGKAEFVPHLLDVMRQAGCEM-LDAILLTHWHADHVGGVND-IRKALGGNIPV--FKKYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGR 1006
TL GTN YLVG G +LID GE V +D +R+A E + I+ THWH DHVGGV D I K +G +PV FK+ + + Y +EDG + +T GATL +STPGHT++H++ L EE +LF+GD ILG GT IF+D +YM SL ++ +M P+ R+Y GHGPV+E EKIE YIKHR +RE QI++ L +K S +QIT +Y +P+ + ++A NV HH+SKL +E +
Sbjct: 56 TLRGTNTYLVGTGKSLVLIDAGEPS---VNQYIDDLREALDENEICCIICTHWHDDHVGGVTDVINKVIGKPVPVYKFKRTDASEDESKYHYVEDGYVVKTEGATLRLLSTPGHTMEHMSIYLEEENSLFSGDCILGEGTTIFEDLYTYMQSLHKLLEMKPS------RIYPGHGPVIENPVEKIEEYIKHRNQREQQILDVLRTSK--IASGMQITNAIYKGIPIAVKMAALSNVTHHISKLMKENK 292
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Match: A0A8C4Z3J9_GADMO (Endoribonuclease LACTB2 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4Z3J9_GADMO) HSP 1 Score: 208 bits (529), Expect = 2.100e-57 Identity = 111/252 (44.05%), Postives = 158/252 (62.70%), Query Frame = 2
Query: 275 TLHGTNCYLVGNGARRILIDTGE-GKAEFVPHLLDVMRQAGCEMLDAILLTHWHADHVGGVNDIRKALGG-NIPVFK------KYGPTVQDFDYSGIEDGQLFRTTGATLEAVSTPGHTVDHVAFVLREEKALFTGDMILGCGTAIFDDFASYMDSLQRVRDMSPNYEGGFIRLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNTLTAAKGRTLSALQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGR 1006
TL GTN YLVG G RR+LIDTGE G E++ L +RQA + + +LLTHWH DHVGGV D+ + + G ++PV K + + Y+ + DG + RT GATL + TPGH+ DH+A +L+EE A+F+GD ILG GTA+F+D YM SL+R+ + P+ +Y GHGPVV A KI++YI HR++RE I++ L AA G + ++ Q+ +Y P + +A N++HHL KL RE +
Sbjct: 27 TLQGTNTYLVGTGPRRVLIDTGERGVPEYISSLRGALRQADATIQE-VLLTHWHHDHVGGVADVHRDITGVDVPVSKLRRTEGRLEEEERGKGYTYLSDGDVIRTEGATLTVLFTPGHSDDHMALLLQEEGAVFSGDCILGEGTAVFEDLHDYMGSLERLMGLRPSL------IYPGHGPVVTEAGPKIQHYISHRKQREQSILSALQAAAGTSFTSTQLVHIIYKDTPQHLHGAAEVNLVHHLKKLEREAK 271 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig862.20053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig862.20053.1 >prot_Ecto-sp13_S_contig862.20053.1 ID=prot_Ecto-sp13_S_contig862.20053.1|Name=mRNA_Ecto-sp13_S_contig862.20053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp MAYLLSSASFLASAFVSSALQFFSRSIRASPLLHQAVKVLDRGKAKXXXXback to top mRNA from alignment at Ecto-sp13_S_contig862:4350..12237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig862.20053.1 ID=mRNA_Ecto-sp13_S_contig862.20053.1|Name=mRNA_Ecto-sp13_S_contig862.20053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig862:4350..12237- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig862:4350..12237- >mRNA_Ecto-sp13_S_contig862.20053.1 ID=mRNA_Ecto-sp13_S_contig862.20053.1|Name=mRNA_Ecto-sp13_S_contig862.20053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1032bp|location=Sequence derived from alignment at Ecto-sp13_S_contig862:4350..12237- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |