mRNA_Ecto-sp13_S_contig8609.20037.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.170e-36 Identity = 64/125 (51.20%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 10 QTCAGLCSDYAYYATQYEVECWCGNNAAYNINGPGVCDFPCAGDASETCGGNFAMSV-------------------PDNAYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
Q CA C++YAYY TQY ECWCGN+ + C F C+GDA ETCGG AMSV D YLGC+ DS TDR+FP S MT A CAD CAEYAYYGTQYG E
Sbjct: 2 QFCADFCAEYAYYGTQYGEECWCGNSGYDTLGESTDCSFGCSGDAGETCGGFNAMSVYSTGSDPVETPTPVAVIEPTDPTYLGCYVDSQTDRIFPVTTASDVMTLAFCADFCAEYAYYGTQYGEE 126
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 131 bits (330), Expect = 2.620e-33 Identity = 69/151 (45.70%), Postives = 77/151 (50.99%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGNNAAYNINGPGVCDFPCAGDASETCGGNFAMS-------------VPDNA-----------------------------YLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
M CA C+DYAYY TQ+ ECWCGNNA Y++ G CD C GD+S+ CGG AMS VPD YLGCF DS DRVF V SG MTTAICA TCA+YAYYGTQ+G E
Sbjct: 605 MTTAICASTCADYAYYGTQFGGECWCGNNADYDVYGEATCDMGCTGDSSDICGGFNAMSFYSTGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPTEPGYLGCFGDSQADRVFSVVTGSGSMTTAICASTCADYAYYGTQFGGE 755
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.590e-32 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGN-NAAYNINGPGVCDFPCAGDASETCGGNFAMSV--PDNAYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
M + CA LCSDYA+Y TQY +CWCG+ NA Y+ NG GVCD PC+GD+ ETCGG ++MSV D AYLGCF DS R+ ++S MT CA C+E YYGTQ+ RE
Sbjct: 313 MTAEFCATLCSDYAFYGTQYSTQCWCGDLNARYSENGEGVCDMPCSGDSEETCGGYYSMSVYAHDPAYLGCFQDSA-GRIMYYSYESDSMTADACAAVCSE-PYYGTQFSRE 422
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE) HSP 1 Score: 121 bits (303), Expect = 4.840e-32 Identity = 62/119 (52.10%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGN-NAAYNINGPG-VCDFPCAGDASETCGGNFAMSVPDN--------AYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
M + C+ CS Y YY TQY VECWCG+ NA Y+ NG C PCAGDASETCGG+++MSV N AY GC++D T+RVF S MT +CA C E A+YGTQY RE
Sbjct: 36 MTKAVCSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRE 154
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.610e-31 Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGNNAA-YNINGPGVCDFPCAGDASETCGGNFAMSV----------PDNAYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
M + C+ C+ AYY TQY ECWCG A Y+ NG GVCD PC GDA ETCGG +AMS+ D +YLGC++D RVF S MT +C++ CA AYYGTQY E
Sbjct: 120 MTAEVCSEACAGSAYYGTQYSTECWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDPADSRVFEQKISSDSMTAEVCSEACAGSAYYGTQYSTE 239
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 124 bits (310), Expect = 1.360e-30 Identity = 65/110 (59.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGNNAAYNINGPGVCDFPCAGDASETCGGNFAMSVPDNAYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGREV 330
M TCAGLCSDYAYYATQY E + + D +ET V DNAYLGCFADSTTDRV V DSG MTTAICADTCAEYAYYGTQYGRE+
Sbjct: 650 MTTATCAGLCSDYAYYATQYGREV-----------------YSTSSDPTET-----PAPVADNAYLGCFADSTTDRVLSVVIDSGSMTTAICADTCAEYAYYGTQYGREI 737
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.010e-29 Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 1 MREQTCAGLCSDYAYYATQYEVECWCGNN-AAYNINGPGV-CDFPCAGDASETCGGNFAMSVPDN--------AYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
M E+ C+G CS Y YY TQY ECWCG+ AY+ NG C PCAGDASE CGG ++MSV N AY GC++D T+RVF S MT CA CA+ A+YGTQY +
Sbjct: 96 MTEEVCSGHCSAYPYYGTQYSTECWCGDGETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQNDVEIPVDPAYRGCYSDPGTNRVFVQDASSDEMTADQCATQCADSAFYGTQYSSQ 214
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE) HSP 1 Score: 105 bits (262), Expect = 4.140e-25 Identity = 50/99 (50.51%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 70 CWCGNNAA-YNINGPGVCDFPCAGDASETCGGNFAMSV----------PDNAYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGREVS 333
CWCG A Y+ NG GVCD PC GDA ETCGG +AMS+ D +YLGC++D RVF S MT +C++ CA AYYGTQY EVS
Sbjct: 25 CWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDPADSRVFEQKISSDSMTAEVCSEACAGSAYYGTQYSTEVS 123
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.460e-24 Identity = 50/106 (47.17%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 34 DYAYYATQYEVECWCGNNAAYNINGPGVCDFPCAGDASETCGGNFAMSVPDN--------AYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
D A ECWCG+NA Y+ NG GVCD C+GDASE CGG +AMSV +N +YLGC+AD R+F V + MT+ C C Y YYGTQY +
Sbjct: 180 DLVATADDMTSECWCGDNADYDANGEGVCDMACSGDASEICGGFYAMSVYENPDVDPVDPSYLGCYADPADSRIFDLVATADDMTSENCLGNCGAYQYYGTQYSTQ 285
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.220e-21 Identity = 50/96 (52.08%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 70 CWCGN-NAAYNINGPG-VCDFPCAGDASETCGGNFAMSVPDN--------AYLGCFADSTTDRVFPAVFDSGGMTTAICADTCAEYAYYGTQYGRE 327
CWCG+ NA Y+ NG C PCAGDASETCGG+++MSV N AY GC++D T+RVF S MT +CA C E A+YGTQY RE
Sbjct: 40 CWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRE 135 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8609.20037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8609.20037.1 >prot_Ecto-sp13_S_contig8609.20037.1 ID=prot_Ecto-sp13_S_contig8609.20037.1|Name=mRNA_Ecto-sp13_S_contig8609.20037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp MREQTCAGLCSDYAYYATQYEVECWCGNNAAYNINGPGVCDFPCAGDASEback to top mRNA from alignment at Ecto-sp13_S_contig8609:4194..6629+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8609.20037.1 ID=mRNA_Ecto-sp13_S_contig8609.20037.1|Name=mRNA_Ecto-sp13_S_contig8609.20037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2436bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8609:4194..6629+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8609:4194..6629+ >mRNA_Ecto-sp13_S_contig8609.20037.1 ID=mRNA_Ecto-sp13_S_contig8609.20037.1|Name=mRNA_Ecto-sp13_S_contig8609.20037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8609:4194..6629+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |