mRNA_Ecto-sp13_S_contig86.20019.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig86.20019.1 vs. uniprot
Match: D7FQU4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU4_ECTSI) HSP 1 Score: 1334 bits (3453), Expect = 0.000e+0 Identity = 741/805 (92.05%), Postives = 754/805 (93.66%), Query Frame = 1
Query: 115 MPADVAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAGNRRSRRPPTTTTGTSFAWGFGTQGETDEAPRRVVDYQPRRTRKRTSPNPEARQSARVGIGNGNTHRTGGRPSAPAAFGEDDGVETARLCSELLRWSSALEGAEKQLGGNGGSAGMESRTGGDIAHARHVARAAPAEDAKEEAPEQSTPSRQVDADESFDSDREDATHHDRPALTRVEERRNDR---RVSGLQRDEGEGEVSGDRDCHRSRSPEVVDDVVEGWEESEGEPAYSSSRRPGGWVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHALYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLREDARIREEEFSRLKKKLAATPSSVAGGKCSCCASTHHGRQRAAGENGPSALKKRALAAEGRTENLERCLRESKTKEQRSREIVASLKHSYSAAQAKAVSLEAELESTRNALSEARQEIAESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIXXXXXXXXKLREEKARVEGESQDLARENRMLQDRLNDGKLRSRTRERDRWILAELRSHSQTRSPTRRRAKGQDPRRDPPPTASRPAARQRSLTREDFRARNDGGRERRLGVQDASFDSASDSEPSVRCRSLSPPPNPGSGEGRAEGAGGRWLPPRDSRRVPGVQARVGGSPSGWGGTGRGLSTRSADGVEGPPGDAAGLRGSSTLSGGCANGTMKARYERLQAMYRRVNRREAGARGRAGVA 2520
MPAD+AWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAGN+R RRPPTT TGTS AWGFGTQGETDEA RR VD Q RRTRKRTSPNPE RQSARVGIGNGNTHRTGGRPSAP AFGEDDGVETARL SELLRWSSALEGAEKQLGGNGG AGMES TGG IA ARHVA+AAPAEDAKEE EQSTPSRQVD DESFDSD+EDATHHDRPA TRVEERRNDR R S QRDEGEGEVSGDRD HRS SPEVVDDVVE WEESEGEPA SSSRRPGG VRGSISTYGHARPTPSYALPTKHFKTPDRDRRHA+YAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLR+DARIREEEFSRLKKKLAATPSSVAGGKCSCCASTHHGRQ+AAGENGPSALKKRALAAEGRTE LERCLRESK KEQRSREIVASLKHSYSAAQAKAVSLEAELESTRN+LSEARQEI ESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREI KLREEKARVEGESQDLARENRMLQDRL+DGKLRSRTRERDRWILAELRSHSQ+RSP+RRRA+GQD RRDPPPTASRPAARQRSLTREDFRARNDG R R LGVQDASFDSASDSEPSVRCRSLSPPPNPG GEGRAEGAGGRWLPPRDSRRVP VQ RVGGSP GWGGTGRGLSTRSADG EGPPGDAA LRGSSTLSGG ANGTMKARYERLQAMYRRVNRREAGARGR+GVA
Sbjct: 1 MPADLAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAGNQRPRRPPTTATGTSSAWGFGTQGETDEASRRAVDCQSRRTRKRTSPNPEVRQSARVGIGNGNTHRTGGRPSAPVAFGEDDGVETARLRSELLRWSSALEGAEKQLGGNGGPAGMESWTGGGIARARHVAKAAPAEDAKEEGSEQSTPSRQVDDDESFDSDQEDATHHDRPASTRVEERRNDRSDTRRSRRQRDEGEGEVSGDRDRHRSHSPEVVDDVVEVWEESEGEPACSSSRRPGGRVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHAVYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLRDDARIREEEFSRLKKKLAATPSSVAGGKCSCCASTHHGRQKAAGENGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKAVSLEAELESTRNSLSEARQEIVESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLREEKARVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRSHSQSRSPSRRRAEGQDSRRDPPPTASRPAARQRSLTREDFRARNDGVRRRHLGVQDASFDSASDSEPSVRCRSLSPPPNPGLGEGRAEGAGGRWLPPRDSRRVPCVQGRVGGSPGGWGGTGRGLSTRSADGAEGPPGDAAVLRGSSTLSGGSANGTMKARYERLQAMYRRVNRREAGARGRSGVA 805 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86.20019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig86.20019.1 >prot_Ecto-sp13_S_contig86.20019.1 ID=prot_Ecto-sp13_S_contig86.20019.1|Name=mRNA_Ecto-sp13_S_contig86.20019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=841bp MTFSEEGEEDSFIVELLNATERHGDGKLQRLDSNRGSAMPADVAWDDGGEback to top mRNA from alignment at Ecto-sp13_S_contig86:26416..34130+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig86.20019.1 ID=mRNA_Ecto-sp13_S_contig86.20019.1|Name=mRNA_Ecto-sp13_S_contig86.20019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86:26416..34130+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig86:26416..34130+ >mRNA_Ecto-sp13_S_contig86.20019.1 ID=mRNA_Ecto-sp13_S_contig86.20019.1|Name=mRNA_Ecto-sp13_S_contig86.20019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2523bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86:26416..34130+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |