mRNA_Ecto-sp13_S_contig8564.19972.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI) HSP 1 Score: 991 bits (2563), Expect = 0.000e+0 Identity = 499/515 (96.89%), Postives = 502/515 (97.48%), Query Frame = 1
Query: 1 FVERWFKVSSSCSGGAAELLAPPDSFSWLLGALGDGGTAAPPSAGDPPPTPVSAVPKQVSGGVDAFLSHVRSVPGRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDKRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVLRRS 1545
FVERWFKVSSSCSGGAAELLAPPDSFSWLLGALGDGG A PP AGDPPPTPVSAVPKQVSGGVDAFLSHVRSVPGRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFG LGFKAVVG GGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDE RSAP+GAGEQD+PDAD+LATSVACGAWHTLVLTKAG VHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPV DKRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVLRRS
Sbjct: 1477 FVERWFKVSSSCSGGAAELLAPPDSFSWLLGALGDGGGAPPPFAGDPPPTPVSAVPKQVSGGVDAFLSHVRSVPGRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAGEQDDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVADKRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVLRRS 1991
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A6H5L3G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G6_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 2.230e-169 Identity = 245/257 (95.33%), Postives = 249/257 (96.89%), Query Frame = 1
Query: 775 GFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDKRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVLRRS 1545
GFKAVVGAGGVSAPRIVRAPCL+EERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRD RSA +G EQD PDADVLATSVACGAWHTLVLTKAG V+AFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTD+RYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVL RS
Sbjct: 20 GFKAVVGAGGVSAPRIVRAPCLSEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDVDRSATQGTDEQDGPDADVLATSVACGAWHTLVLTKAGKVYAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVTDRRYLLPRRVTSGRGGAAPAYRLVAQGASLTLGIAEGVRTDPRGGGGDRSRTVLHRS 276
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A5D6YAN1_9STRA (PH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAN1_9STRA) HSP 1 Score: 201 bits (511), Expect = 5.940e-52 Identity = 137/396 (34.60%), Postives = 201/396 (50.76%), Query Frame = 1
Query: 220 PGRLYVDGQVTGLSPEDEAKKRTQDQES--------DADGALKLLPLRIPTEWQ-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEP-------KVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRI-VRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIE--RNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
PG G+ GLS ++EA+ T + S D K+ LR P+ + VV V+CG+RH+ALVT + + T G+GE GRLGHGDEE P ++ ++ + + CGREHT+ L +G +Y++GW E GRLG G+ P +V + ++ +CGREH+LA++ G ++AFG GF +G G + VR L R+V G+ HS+ V SG VFTWG G++GALG G ++ P VSG +D ++D A T++ACG +HTLV T AG ++ +GD GQLG + L+P + + R G P + EV+ G+F+SAV +G L+ WG A
Sbjct: 1332 PGVALSWGEPFGLSLDEEAQVATAPRGSRLAQLRARPMDSGSKVELLRFPSALRRVVHVSCGYRHTALVTDNRSLYTYGYGECGRLGHGDEESVATPTAVGFFESLIESVGASVGGIAHVACGREHTMAVLVNGDLYAFGWAEAGRLGTGDTGCCAYPTKVLALQSTPIQAA--ACGREHTLALTKQGEVFAFGA------GFGGRLGIGSEADEEYPVRVAALDGVRIVRIDAGECHSAAVNDSGDVFTWGFGNSGALGTGSRDNSLLPTKVSGAWQD----------DEDESGAQATVTALACGGYHTLVATSAGKLYGWGDSAAGQLGAA-LVAAPDMIVLAPHEIPLAGVRTTPSSGSPP--PTIREVSAGTFTSAVCLDDGRLFVWGSTAA 1706
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: H3GZM4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZM4_PHYRM) HSP 1 Score: 188 bits (477), Expect = 1.600e-47 Identity = 140/392 (35.71%), Postives = 193/392 (49.23%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEA------KKRTQDQESDADGALKLLPLRIPTEWQ-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQA-------VVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG G +GLS ++EA + T A+ A + L P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG EE +PK V QA VV CGREHT+ +SG ++ +GWGE GRLG GE + L P RV N+G XXXXXX + P IVR + R+ A G+ HS + G VFTWG GS+GALGHG ++ PR++ G E GE + ++ V+ TS+ACG +HTL T G ++ +GD GQLG+E + + LSP + + NAG + ++CG+F++AV ++ G+LY WG P A
Sbjct: 1246 VPGLALAWGSPSGLSLDEEAHISNGARAATLALRPTAENASSVSMLLFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGVEESCTDPKAVGYFTSLIQAEGIQVGGVVDVSCGREHTMAVTSSGDLFGFGWGEAGRLGTGETGSSLFPSRVTSLKNVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETDEEL-------PFIVRG--MEGYRITAVDAGECHSCALSDEGDVFTWGFGSSGALGHGNRDNCLEPRLLEGPWTSSVDV--EFDGENLSSESPVV-TSIACGGYHTLAATSGGVLYGWGDAAAGQLGVEHITAQ-DMVVLSPEEITVPTNAG----------LRGISCGTFTTAVCTNSGHLYMWGSPAA 1614
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: D0NAQ4_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NAQ4_PHYIT) HSP 1 Score: 186 bits (471), Expect = 9.040e-47 Identity = 139/405 (34.32%), Postives = 190/405 (46.91%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTE--------------WQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEP-------KVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVL------ATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG V G GLS ++EA+ L LR+ TE +VVQ+ACG+RH+AL+T + T GHGE GRLGHG EED +P ++ A VV CGREHT+V +G +Y +GWGE GRLG GE + L P RV+ + + XXXXXX P +V L E +VA A G+ HS + G+V TWG GS+GALGHG ++ P +V G NP+ + L TSVACG++HTL T G ++ +GD GQLG E + + LSP+ +R+ ++G + +ACG+F+SAV S++G L+ WG P A
Sbjct: 1194 VPGLALVWGYPLGLSLDEEAR---------ISPGTSTLSLRLSTENLSAVRMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD--------LRNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETDEELPFLVEG--LEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDG--------------PWTNPNVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQ-DLVVLSPKEIRLPTSSG----------IRGIACGTFTSAVCSTQGQLFMWGSPAA 1554
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A0P1AQZ9_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQZ9_PLAHL) HSP 1 Score: 183 bits (464), Expect = 7.790e-46 Identity = 136/390 (34.87%), Postives = 189/390 (48.46%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEAK-KRTQDQESDA----DGALKLLPLRIPTEWQ-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVR------ALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG + G GLS +DEA+ R +S + A + L P + VVQ+ACG+RH+AL+T L+ T GHGE GRLGHG EE +PK V A +V CGREHT+V A+G ++ +GWGE GRLG GE + L P RVE +T ++ XXXXXX P IV L + A G+ HS + +G +FTWG G +GALGH ++ P +V+G S E E D P +VL T ++CG +HTL T G ++ +GD GQLG E + LSP ++R +P + ++CG F+SA+ +++G L+ WG P A
Sbjct: 1177 VPGFALMWGNPLGLSLDDEAQISREPHMKSSLRPRPETAASICTLSFPPSIRCVVQIACGYRHTALITDDRLLYTFGHGECGRLGHGTEESCHDPKPVSYFLNLIAAKGVAAGIVDVSCGREHTMVVTANGHLFGFGWGEAGRLGTGETGSTLHPSRVE--------LTNITKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYETDEKFPAIVEG--LDGYIITAMDAGECHSCALSTNGTIFTWGFGHSGALGHNSRDNCLKPTLVTG-----PWSNNEQVSEDDTPSKEVLVTFISCGGYHTLATTSNGVLYGWGDAAAGQLGPECLNAP-DFVILSPTIIR----------TPTFSKINNISCGMFTSAMCNTQGQLFMWGSPAA 1540
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A2P4XMA0_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMA0_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.080e-45 Identity = 135/392 (34.44%), Postives = 194/392 (49.49%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEA------KKRTQDQESDADGALKLLPLRIPTEWQ-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQA-------VVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG G+ GLS +DEA + T + + A + + P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG E D ++P V A A VV CGREHT+ A+G ++ +GWGE GRLG GE D+ L P RV + ++ XXXXXX P V+ + + ++ A G+ HS + G VFTWG GS+GALGHG ++ P+++ G S E GE +A ++ TS+ACG++HTL T G ++ +GD GQLG+E + LSP+ +R+ P + +ACG+F+SAV +S+G+L+ WG P A
Sbjct: 581 VPGLALTWGKPLGLSLDDEAQISHGHRSATISMQPTTENASTITMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEYDCVDPMCVGYFASLIAAEGIEVGGVVDVSCGREHTMAVTANGDLFGFGWGEAGRLGTGETDSSLFPSRVG--------LKNIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSELDEELPYRVQG--IEDYKIAAIDAGECHSCALSNEGDVFTWGFGSSGALGHGNQDNCLEPKLLEGPWT--KGSNLEFDGEHLTSEASIV-TSIACGSYHTLASTSDGVLYGWGDAAAGQLGVEHTTAT-DMVVLSPKQIRV----------PTSSKIRGIACGTFTSAVCTSQGHLFLWGSPAA 948
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A6A4D1B7_9STRA (PH domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D1B7_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.260e-45 Identity = 132/394 (33.50%), Postives = 190/394 (48.22%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEAK--------KRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQA-------VVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRS-APEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG G+ GLS ++EA + +D+ +++++ P +VVQ+ACG+RH+AL+T + T GHGE GRLGHG +ED +P V +A VV CGREHT+ ASG ++ +GWGE GRLG GE + L P RV + N+ XXXXXX + R+ A G+ HS + + G VFTWG G +GALGHG ++ PR + G TR+ E GE + V+ T+VACG++HTL T G ++ +GD GQL +E E LSP +R+ ++G + V CG+F+SAV +++G+L+ WG P A
Sbjct: 1268 VPGLTLTWGKPLGLSLDEEAHISHGGHSAALSLRPTTDSASSIRMVSFPPPLR-RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTQEDCTDPMPVGYFTSLIEAEGVSVGGVVDVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPSRVTDLQNIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------DYRIAAIDAGECHSCALSSEGDVFTWGFGGSGALGHGTRDNSLEPRRLEGPW---TRNPVDEADGENQTTERGVV-TAVACGSYHTLAATSDGALYGWGDAAAGQLSVEYVTAP-EMVVLSPEKIRVPTSSG----------IRSVGCGTFTSAVCTNQGHLFLWGSPAA 1636
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: G4Z438_PHYSP (PH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z438_PHYSP) HSP 1 Score: 179 bits (454), Expect = 1.600e-44 Identity = 135/392 (34.44%), Postives = 193/392 (49.23%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEA------KKRTQDQESDADGALKLLPLRIPTEWQ-VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQA-------VVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG V G+ GLS ++EA + T A+ A + P + VVQ+ACG+RH+AL+T + T GHGE GRLGHG++ED EP V +A VV CGREHT+ ASG ++ +GWGE GRLG GE + L P RV + XXXXXX + P V+ L + R+ A G+ HS + G V TWG GS+GALGHG ++ PR + G T +A +G E++ + +++ACG++HTL T G ++ +GD GQL +E E L+P+ +R+ N+G + VACG+F+SAV +++G+L+ WG P A
Sbjct: 1691 VPGLALVWGKPLGLSLDEEAHISQGGRSATLCLRPTAENASPIRMASFPRPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEEL-------PFAVQG--LEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPW---TGNAIDG--EENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAP-EMVVLTPQRIRVPTNSG----------IRSVACGTFTSAVCTNQGHLFLWGSPAA 2057
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Match: A0A0W8DL90_PHYNI (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DL90_PHYNI) HSP 1 Score: 179 bits (453), Expect = 1.820e-44 Identity = 132/391 (33.76%), Postives = 194/391 (49.62%), Query Frame = 1
Query: 217 VPGRLYVDGQVTGLSPEDEAK------KRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEP-------KVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGXXXXXXLGFKAVVGAGGVSAPRIVRAPCLAEERVVAAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDETRSAPEGAGEQDNPDADVLATSVACGAWHTLVLTKAGTVHAFGDGFTGQLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDA 1350
VPG G GLS ++EA+ K + ++ +++++ P +VVQ+ACG+RH+AL+T + T GHGE GRLGHG+EED +P ++ A VV CGREHT+V +G +Y +GWGE GRLG GE + L P RV XXXXXX + + P +V L E + A G+ HS + G+VFTWG GS+GALGHG ++ P++V G T + GE D V+ SV CG++HTL T G ++ +GD GQLG+E+ + + SP +R+ ++G + +ACG+F+SAV +++G+L+ WG P A
Sbjct: 864 VPGLALAWGNPLGLSLDEEARISHGASKMSLRLTTENSSSVRMISFPPPLR-RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNEEDCTDPIPVGYFTSLIAAEGVEFGGVVGVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADEEL--------PFLVEG--LEEYSIAAIDAGECHSCALSREGEVFTWGFGSSGALGHGARDNCLIPKLVEGPW---TNPNMDFDGETLTHDISVV-VSVKCGSYHTLAATNDGVLYGWGDAAAGQLGVENLTAQ-DMVVPSPTKIRVPTSSG----------IRGIACGTFTSAVCTTQGHLFMWGSPAA 1228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8564.19972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8564.19972.1 >prot_Ecto-sp13_S_contig8564.19972.1 ID=prot_Ecto-sp13_S_contig8564.19972.1|Name=mRNA_Ecto-sp13_S_contig8564.19972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=516bp FVERWFKVSSSCSGGAAELLAPPDSFSWLLGALGDGGTAAPPSAGDPPPTback to top mRNA from alignment at Ecto-sp13_S_contig8564:1..5539+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8564.19972.1 ID=mRNA_Ecto-sp13_S_contig8564.19972.1|Name=mRNA_Ecto-sp13_S_contig8564.19972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8564:1..5539+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8564:1..5539+ >mRNA_Ecto-sp13_S_contig8564.19972.1 ID=mRNA_Ecto-sp13_S_contig8564.19972.1|Name=mRNA_Ecto-sp13_S_contig8564.19972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8564:1..5539+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |