mRNA_Ecto-sp13_S_contig85324.19935.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: I2GUR8_TETBL (IPT/TIG domain-containing protein n=1 Tax=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) TaxID=1071380 RepID=I2GUR8_TETBL) HSP 1 Score: 55.1 bits (131), Expect = 4.690e-7 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 46 VVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADPAIKAQQGVT 207
+V+ L++NGA V+ +D F +TPLH AC+NG ++ LL AD +IKAQ +T
Sbjct: 1013 LVSTLIKNGARVNDKDSFGFTPLHFACVNGNFKIIKILLSCNADYSIKAQNNIT 1066
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A1Z9C4U5_9BACT (Acyl_transf_3 domain-containing protein n=1 Tax=Opitutae bacterium TMED102 TaxID=1986876 RepID=A0A1Z9C4U5_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 1.170e-6 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 22 PAHLLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADP 180
PA L V +L++ G V+ RD F TPL++AC NGA+ ++ALL+AGADP
Sbjct: 501 PAKLRKYDAVGLLIEKGIDVNHRDKFGRTPLYMACRNGALGDIKALLKAGADP 553
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: UPI0018CAEB57 (ankyrin repeat domain-containing protein n=1 Tax=unclassified Polaromonas TaxID=2638319 RepID=UPI0018CAEB57) HSP 1 Score: 52.0 bits (123), Expect = 3.760e-6 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 37 HTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADPAIKAQQGVTPL 213
HT ++ +L++N A +D+ TPL +A + G+ ASV+ LL+ GADP +K QQG+T L
Sbjct: 137 HTALIGLLLENNAYIDAESPNSSTPLMMAAMYGSEASVKLLLKEGADPRLKNQQGLTAL 195
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A6M5JK05_9SPHN (Ankyrin repeat domain-containing protein n=1 Tax=Sphingomonas sp. AP4-R1 TaxID=2735134 RepID=A0A6M5JK05_9SPHN) HSP 1 Score: 51.2 bits (121), Expect = 5.100e-6 Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 25 AHLLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADP 180
A L T ++ +LVQNGA V++ + +TPL LA NG A+VEAL+ AGADP
Sbjct: 35 AKLGRTDLIPLLVQNGADVNAYEARGFTPLILAAYNGQAAAVEALIAAGADP 86
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A7H9B9M1_ZYGMR (IPT/TIG domain-containing protein n=1 Tax=Zygotorulaspora mrakii TaxID=42260 RepID=A0A7H9B9M1_ZYGMR) HSP 1 Score: 50.1 bits (118), Expect = 2.730e-5 Identity = 22/57 (38.60%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 37 HTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADPAIKAQQGVT 207
+ ++++L++NGA V+ RD + +TPLH AC+ G + + LL+ AD AI+A+ +T
Sbjct: 741 YQSLLSILIKNGARVNDRDLYGFTPLHFACVGGDASVIRLLLQCKADLAIRAKNDIT 797
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A2D7HLN5_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2D7HLN5_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 8.150e-5 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 16 HVPAHLLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADPAIKAQ-QGVTPLI 216
H A+ HT V L+Q GA++DSRD TPL AC +V+AL++AGAD +K +G TPL+
Sbjct: 144 HHAAYNGHTATVLFLIQQGATLDSRDHEGKTPLIHACTGPFPETVQALIKAGADVNVKGTAEGFTPLM 211
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A4U8V4Q7_STECR (Uncharacterized protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8V4Q7_STECR) HSP 1 Score: 48.5 bits (114), Expect = 9.350e-5 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 31 LLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAG 171
+LH ++++L+QNGA+VD+RD F YTPLH A + V L+ G
Sbjct: 191 ILHQTIISVLLQNGATVDARDNFNYTPLHYAALKDNVKEARELIEKG 237
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A7H9HSC9_9SACH (IPT/TIG domain-containing protein n=2 Tax=Torulaspora TaxID=4948 RepID=A0A7H9HSC9_9SACH) HSP 1 Score: 48.5 bits (114), Expect = 9.550e-5 Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 37 HTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAGADPAIKAQQGVT 207
++ + + L++NGA V+ +D + +TPLH AC+ G V + L ADP+IKA VT
Sbjct: 739 YSSLCSTLIKNGARVNDKDLYGFTPLHFACVGGDVRVIRLLAECKADPSIKACNFVT 795
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Match: A0A4U8V627_STECR (Ion_trans domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8V627_STECR) HSP 1 Score: 48.5 bits (114), Expect = 9.580e-5 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 31 LLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVEALLRAG 171
+LH ++++L+QNGA+VD+RD F YTPLH A + V L+ G
Sbjct: 170 ILHQTIISVLLQNGATVDARDNFNYTPLHYAALKDNVKEARELIEKG 216 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85324.19935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig85324.19935.1 >prot_Ecto-sp13_S_contig85324.19935.1 ID=prot_Ecto-sp13_S_contig85324.19935.1|Name=mRNA_Ecto-sp13_S_contig85324.19935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp TNKHTHVPAHLLHTQVVTMLVQNGASVDSRDGFFYTPLHLACINGAVASVback to top mRNA from alignment at Ecto-sp13_S_contig85324:152..370- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig85324.19935.1 ID=mRNA_Ecto-sp13_S_contig85324.19935.1|Name=mRNA_Ecto-sp13_S_contig85324.19935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=219bp|location=Sequence derived from alignment at Ecto-sp13_S_contig85324:152..370- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig85324:152..370- >mRNA_Ecto-sp13_S_contig85324.19935.1 ID=mRNA_Ecto-sp13_S_contig85324.19935.1|Name=mRNA_Ecto-sp13_S_contig85324.19935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=219bp|location=Sequence derived from alignment at Ecto-sp13_S_contig85324:152..370- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |