mRNA_Ecto-sp13_S_contig850.19898.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig850.19898.1
Unique Name	mRNA_Ecto-sp13_S_contig850.19898.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 1.390e-161
Identity = 229/237 (96.62%), Postives = 232/237 (97.89%), Query Frame = 1

Query:   37 MVSVSRPLLAFAAARAQG---RLFSFGTARHCAGFSGPVGEGKPQHDFKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLLEGD 738
            MVSVSRPLLAFAAARAQG   RLFSFGTARHCAGFS PVGEGKPQHDFKVLNRDLAY+GWRKIVKKTVRVE EKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETT+NADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRG+LSIVSSFVVLMGARKLRQLGLLEGD
Sbjct:    1 MVSVSRPLLAFAAARAQGTAGRLFSFGTARHCAGFSSPVGEGKPQHDFKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLLEGD 237

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: D7G0V2_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V2_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 9.330e-54
Identity = 92/185 (49.73%), Postives = 121/185 (65.41%), Query Frame = 1

Query:  169 FKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLG 723
            ++ ++   AY GWR I+++ +R    K   +DV+ QE PSV VF W TQTNT T++KE+ PG   + +GVV G YE +KH S LQAA  ELEEEAHL  GTW+ L +D+ T   A KYS+  FY +LVVDP V  TP+ +DD EFIE  RGVS++E   M+  G +S+ S F  LM   KLR+LG
Sbjct:   80 YECISESPAYKGWRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKDERTVAGAGKYSTQVFYSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELG 264

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A7S3Y3W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W4_HETAK)

HSP 1 Score: 186 bits (472), Expect = 2.910e-52
Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 1

Query:  160 QHDFKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQE-EPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLLEGD 738
            +  FK+L   +AY+ WRKI+++ V + +     FD+VH + E S+ VF W T+  T TL++EF PG   + HGV AGMYE NKH SPL+AA+ ELEEEAHL GGTW  +  D+  T+  DKY++N  +C+LV+DP   P P+ +D EE IEIR G +  + M ++  G ++I+SS+  L+   KLR LGLL  +
Sbjct:   83 ESSFKILAERVAYSRWRKIIERDVELPNGTQCSFDIVHNDLEGSIVVFAWDTRAQTATLVREFQPGPMRLLHGVAAGMYEPNKHGSPLEAARMELEEEAHLTGGTWINMM-DEGQTITVDKYNTNRVHCFLVLDPTPAPNPRALDAEEHIEIRPGATRGDIMGLITSGNMNIMSSYTCLLAFEKLRTLGLLNDE 275

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC)

HSP 1 Score: 150 bits (379), Expect = 3.290e-39
Identity = 72/190 (37.89%), Postives = 110/190 (57.89%), Query Frame = 1

Query:  169 FKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLLEGD 738
            FKV+   + Y GW+ ++ +T+ + + K   +D+ H + P+V V  W TQ  T    +E+ PG  +   G VAG+YE+ KH+SPL AAK ELEEEAHL+GG W  L  ++   ++ +KYS   FY +L +DP  T  P+P+DD E I + R V  +  +     G  ++ +S   L+   KLR++G L  D
Sbjct:   37 FKVIGEQMVYQGWKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLI-NERGVMDYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGELPKD 225

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: B8CE31_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE31_THAPS)

HSP 1 Score: 146 bits (369), Expect = 2.340e-37
Identity = 77/211 (36.49%), Postives = 120/211 (56.87%), Query Frame = 1

Query:  163 HDFKVLNRDLAYAGWRKIVKKTVR--VEHE-----------KDYVFDVV---HQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDS--------PLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLG 723
            HD+ ++N ++ Y+GWRK++++TV   + H            K   FDV+   H    +V +F W++ + T T+++E+ PG   V  G+ AG+ E  KH S         L AA++ELEEE HL GG W  L E+   ++  DKY   E   +LV+DP+  P P+P+DDEE IEI  GV+++E  +M+  G +++V  F  L+   KLR+ G
Sbjct:   54 HDYTIVNDEVRYSGWRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQNHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLTENG-VSIPMDKYVVTEITPYLVIDPHHVPNPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFG 263

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH)

HSP 1 Score: 140 bits (354), Expect = 2.180e-36
Identity = 70/165 (42.42%), Postives = 106/165 (64.24%), Query Frame = 1

Query:  241 HEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLLEG 735
            H +   +D++ Q+  SV VFVW T + T TL+KE+ PG  +V  G VAGM E  KH S LQAA++ELEEEAHL    W++L  +    +  DKYS+N F  +L +D     + KP+DDEE+I I R V+  E M ++  G++++VS++ +++G +KL+ LG+  G
Sbjct:    4 HGQKVDYDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLLNEG-AIMPFDKYSNNRFIPYLALDCEPVKSAKPLDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLGIKVG 167

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A4D9D3K8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3K8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.590e-35
Identity = 83/202 (41.09%), Postives = 117/202 (57.92%), Query Frame = 1

Query:  136 GPVGEGKPQHDFKVLNRDLAYAG-WRKIVKKTVRVEHEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDD-ETTVNADKYSSNEFYCWLVVDPY--VTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLL 729
            G +  G    DF +L     Y G WR ++++ V+    +   FDV+ Q   SV VF+W++ ++T TLI+E+APG  +V    VAG  E  KH+ P  AA  ELEEEAHL GGTW  L E + E  V ADKYS+  F+ +LVVDP   V    +  DDEE + + R V++ E  R++ RGK+++  +   L+   KLR L LL
Sbjct:   68 GSITPGLAPQDFTLLKEKDLYRGKWRSLLQRDVQYPDGRQVTFDVMDQPGSSVLVFIWNSTSHTTTLIEEYAPGSLQVIFTPVAGGCEDEKHEDPQHAAVLELEEEAHLKGGTWFNLLEGEGEEGVAADKYSTCPFHFYLVVDPVREVEKNARKRDDEELLVVHREVTLVEVRRLIRRGKMTVPGACASLLAMEKLRALKLL 269

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A448Z503_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z503_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.680e-35
Identity = 76/199 (38.19%), Postives = 118/199 (59.30%), Query Frame = 1

Query:  136 GPVGEGKPQHDFKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQE--EPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYE-KNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLG 723
            G    G     F++L  ++ Y+GWR I K+ VR+ + K   FD+V  +  E +V +F W +++ T T+I+E+ P    V  G+ AG+ E K++H++ L AA++ELEEE HL GG W  L          DKYS+    C+LV+DP     PKP+DDEE IEI  GV++ E +  V  G++++V  +  L+  +KL++LG
Sbjct:   88 GTADSGTGDKTFEILEENIVYSGWRTINKRIVRMRNGKVVDFDLVGVKTGEGAVLIFAWDSKSKTATMIREYMPASHRVLWGLAAGLIEDKHEHNTEL-AARHELEEECHLKGGRWIPLLTQPAAM---DKYSTTTIQCYLVIDPEPEENPKPLDDEEDIEIVSGVTIPEILEFVRNGEMNLVGGYGSLLAIQKLQELG 282

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A7S2RZZ7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZZ7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.380e-34
Identity = 70/190 (36.84%), Postives = 115/190 (60.53%), Query Frame = 1

Query:  169 FKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQEEPSVAV-FVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDS-PLQAAKYELEEEAHLLGGTWHTLCEDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLRQLGLLE 732
            +K+L+  + Y  WRK++++ V +       +DVV Q+    A+ F W + T T T+++E+ PG  +V  G+ AG+ E +KH S PL AA++ELEEE HL GGTW+ L +     +  DKY       +LV+D +    P+P+D+EE IEI  GV++ E   M+  G +++V S+  L+  +KL++LG ++
Sbjct:   26 YKILSEKVVYERWRKVIQRKVLMPKGLVVDYDVVDQKGAGAAIIFAWDSSTKTATIVREYNPGCHQVLGGLAAGLIEDDKHGSDPLIAARHELEEECHLGGGTWYQLTKPG-VAIAMDKYVQTRVTPYLVIDAHKIDNPRPLDEEEDIEIVGGVTVDEIKNMIESGDMNLVGSWASLLALQKLKELGEIQ 214

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BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Match: A0A7S1XDJ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDJ4_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 5.810e-27
Identity = 67/188 (35.64%), Postives = 107/188 (56.91%), Query Frame = 1

Query:  166 DFKVLNRDLAYAGWRKIVKKTVRVEHEKDYVFDVVHQE--EPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTVNA---DKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGKLSIVSSFVVLMGARKLR 714
            DF + +    Y G+R + ++ VR    + + FD+V +   + SV VF +  ++ + TLIKE+ PG   V +GV+AG  E  KH S + AA+ EL EEA+L+GG    L    +++      DKYS++ F+ +L +D  + P+P   D EEFIEI RGVS+ +   +V  G++++  S   L+    LR
Sbjct:   60 DFTIESDTEVYRGYRSVFQRRVRYPSGESFTFDIVGRPHGDSSVFVFPFCRRSRSATLIKEYNPGGNGVLYGVIAGFVEMGKHTSIVDAARRELAEEANLIGGQLIPLQRQTDSSSAGYLKDKYSTDRFHMFLALDSELDPSPPQQDPEEFIEIVRGVSLDQVRTLVFNGQMNVPCSLACLLALEHLR 247

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig850.19898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
D7G6B3_ECTSI	1.390e-161	96.62	Nudix hydrolase domain-containing protein n=2 Tax=...	[more]
D7G0V2_ECTSI	9.330e-54	49.73	Nudix hydrolase domain-containing protein n=2 Tax=...	[more]
A0A7S3Y3W4_HETAK	2.910e-52	45.88	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A0G4H3V0_VITBC	3.290e-39	37.89	Nudix hydrolase domain-containing protein n=1 Tax=...	[more]
B8CE31_THAPS	2.340e-37	36.49	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A482S980_9ARCH	2.180e-36	42.42	NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 Rep...	[more]
A0A4D9D3K8_9STRA	2.590e-35	41.09	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A448Z503_9STRA	7.680e-35	38.19	Nudix hydrolase domain-containing protein n=1 Tax=...	[more]
A0A7S2RZZ7_9STRA	2.380e-34	36.84	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S1XDJ4_9RHOD	5.810e-27	35.64	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig850	contig	Ecto-sp13_S_contig850:6099..10542 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	464.5
Seed ortholog evalue	2.9e-128
Seed eggNOG ortholog	2880.D7G6B3
Model size	1323
Hectar predicted targeting category	mitochondrion
Exons	4
EggNOG OGs	2CFIT@1,2S4K6@2759
Ec32 ortholog description	NUDIX hydrolase domain-like
Ec32 ortholog	Ec-10_001220.1
Cds size	708
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig850.19898.1	prot_Ecto-sp13_S_contig850.19898.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig850 6135..9963 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464120.446147-UTR-Ecto-sp13_S_contig850:6098..6134	1681464120.446147-UTR-Ecto-sp13_S_contig850:6098..6134	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig850 6099..6134 +
1681464120.5121055-UTR-Ecto-sp13_S_contig850:9963..10542	1681464120.5121055-UTR-Ecto-sp13_S_contig850:9963..10542	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig850 9964..10542 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464120.4598653-CDS-Ecto-sp13_S_contig850:6134..6186	1681464120.4598653-CDS-Ecto-sp13_S_contig850:6134..6186	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig850 6135..6186 +
1681464120.4703782-CDS-Ecto-sp13_S_contig850:8231..8419	1681464120.4703782-CDS-Ecto-sp13_S_contig850:8231..8419	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig850 8232..8419 +
1681464120.4816105-CDS-Ecto-sp13_S_contig850:8695..8857	1681464120.4816105-CDS-Ecto-sp13_S_contig850:8695..8857	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig850 8696..8857 +
1681464120.4980998-CDS-Ecto-sp13_S_contig850:9657..9963	1681464120.4980998-CDS-Ecto-sp13_S_contig850:9657..9963	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig850 9658..9963 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig850:6099..10542+
coding sequence from alignment at Ecto-sp13_S_contig850:6099..10542+

protein sequence of mRNA_Ecto-sp13_S_contig850.19898.1

>prot_Ecto-sp13_S_contig850.19898.1 ID=prot_Ecto-sp13_S_contig850.19898.1|Name=mRNA_Ecto-sp13_S_contig850.19898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MVSVSRPLLAFAAARAQGRLFSFGTARHCAGFSGPVGEGKPQHDFKVLNR
DLAYAGWRKIVKKTVRVEHEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLI
KEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLC
EDDETTVNADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQE
CMRMVGRGKLSIVSSFVVLMGARKLRQLGLLEGDV*

mRNA from alignment at Ecto-sp13_S_contig850:6099..10542+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig850.19898.1 ID=mRNA_Ecto-sp13_S_contig850.19898.1|Name=mRNA_Ecto-sp13_S_contig850.19898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig850:6099..10542+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCACACCGCCCACCAGTACCCGCTACACAGAACGGATGGTGTCCGTCTC
TCGACCTCTGCTGGCTTTCGCTGCTGCAAGGGCACAAGGTACAGCAGTTT
TGACGGTAGAACGAAATAGAGTGCTGCTGTGCACAACCGCCGCTGGTCCG
TACCTGTCCGAGTACATGTCACATGATGCGAACGGAACGTATAACAACCG
CGGTCCGTGTTTCGGTTGGATTATTTCGTTACGTATTCCTAAACAACACA
ACAGCAGTGGGCGGGTTGCTTTACACGATGTGTGGAGAAGTATGTTATCT
ACAGCGCACTTATTTTGAACATCTGATCGGGGAATGTACGTGGCATCATC
CAATTACTTGTTATTCCAGTATGGAGGTAACTATTGCCCATTTACTTCGA
TGTTGTGTGTCGCCATGTTTACTAGAGCGCGCTGCGAGCGTATACTGGGC
CGGGTCGAGCTCGATTTCTCCACAAGATGAGAAGTTCCGGTGCCGAAAAG
GGCGGCACTGCGAAGATTATTTCATCAAGAGCTTTCCGAACAAGTCTTGT
TTGGCATTGGCATCCCCTTGGTAGTGGACCAAGCGAGCTTTCAATTCCGC
CCAATTCGGATCTCATACTTTCGTTCCTCCGCTAGTCTGTACAGTAGTGT
ACTCGAAGAAGGAGAAGTCAGCCGCGCCACAACATGTGGAAAACGAACGT
GCGTAAGACAGTGGTCTATATTCTCTCTCTCTCATGCAAGTCTTGAAGGA
ACGTTACCGAAGCACCAAGGAGCCGAAACCTCGTTGGTCTCGCTCGTCTA
GTACCCACGTTTCCCTCCATGCCAGTAATGCTGTTTTCGTTTATCGAGAC
CCTCAGTGGTATTTTACGTTCATGGAGACTGCCCAATTTAGCTGTACCTG
CCGCATTTACAATTTGGCGACCTGCCTGTAGGACCTTGTTGTGCCCCCGC
AACCTCCCTTGTTGCTGCACCGAAAGGAACAATGGGGCGAGCGCTCTCAG
GCAAGGAAAGTTCATCCTCCGTTCAAAGCAACTCTGCTACGGCCCCGCTC
CCGCCCCGGCCCTGCGGTGCTTGCCCTCGTGCAACGTATCGGACGCGTGC
ATGGCTACACCCGTTCTCGGACGGGTCGCCGTTGTGACCTCGAATATTTT
GCTGCCATTAGAGGCAATGTGGTAAAAGCTCGGTTGTTGTCAGTCCGCCA
TATGCCAATTAAACACGGAGTAGTGAACTCGCGCCGCCGACGAGACGAAC
ATGTCATCTGACCGCGCCACTACGAAGTACGTCAGCGGTAGGAATGACGA
TAGATGATCCAATCGATTATTTGCCACATGGAACGCATTGGTTAACTCCC
GACAAAACATTGCTTAGGCAGCGAAGCACGGAACTCTTCGAAGACCGTAA
AGACACCCGTGCTACAGCACGTGGATTTAGCGTCTACCATGGAAGTACAT
TTTTTCTATCTTCACACCGAATCATGAATTCACAACCCCCAGACATCATT
CCTACAGGAACGACTGTAGTGGTTTGCGTGTGACCTCTGTAGATGCATTC
CACTTAAATGCCAGCTTTGGCGAAGTACACACAATACACACGATAACCAC
GGACAGACCCGCAATACCTGTCTATCCATTGCTTGACAATCCCTGCTGTT
GTTCCAGCCGGTAGGTGCGAAATGTTGGTTGTACATTTCAATGCAAGAGA
GAGAGAGAGAGATCAACGTGCGCTAGCACGTCATCGTCTGGGTTTGGGCG
TATCATTTCCCAACTCCAGGGACTTTGATTCCCTTGTTCCTTACATGTGC
GCATTCAACGAATCCCACCTACATATTTATCAGACCTCATATTTTCACGG
AGTACAGCCGAAAATGGGCGGCGGGTCCTGCCTTTCTTTTCCGCATCGGA
AGATGCCGACATATCGTCATCTGCGCCAGATAGGTCGCACAGTTTTTGAC
AATCGCGGTCCTCACCAGATATACTGAGCTTTGGTCATGCCATTGTTAGT
CCGAGGCTTTCTATCCCGGGCACTTGTTTCCATATAGTACATGCATGTGG
AACTCGAGAATGCGGCGTCTTGACTGCTGTTGATGGAACCCCACACCCTT
CGCTCGCAACGGATGCTTTGTTTGTGTCGCCAGGGCGTCTTTTTTCCTTC
GGGACGGCACGACATTGCGCTGGCTTCAGCGGCCCTGTTGGGGAGGGCAA
GCCACAGCATGACTTCAAAGTGTTGAACCGTGACTTGGCGTATGCGGGAT
GGCGGAAGATTGTGAAGAAGACGGTTCGTGTTGAGCACGAGAAAGACTAC
GTGTTCGATGTTGTCCATCAGGTAAATTTGATGTTCATCTATCTAAGCAG
ACTGCTTCTGGCCCTAAAGTGATTTTGGGCTGAAGAAGACACAAGAACAA
CGGCGTACTGCTGTACCTCTACGCTATGTCTTCATCATGCTAGTGCTCTT
CTGCTGAACGGCGAGTCCAAACCCTTCTCTCGAGGTGTGACGCCACTGCT
GTCATTTTACTCGGCACATAGATGTGCAGGAACGCCACTTTCACTGTCCT
CGGAGTTTTGCCTTAACTCGATCGCCCTTGCCGCTTGCCCAATCAAGGAG
GAACCATCGGTGGCAGTTTTTGTTTGGCACACCCAAACCAATACTTTGAC
GCTGATCAAGGAATTCGCTCCCGGGCGTGAGGAGGTGGCGCACGGGGTTG
TGGCTGGCATGTACGAGAAGAACAAACACGACTCCCCACTCCAGGCGGCC
AAGTATGAGGTGAGTGAGGGCTCTCGATTGTATCAAACCGATTGTATCAA
ACCGATAGGATAGATCGCACCTTGTGCTTTTTTTTACTTGCGCTGGATGA
AAAACCGATACCCGCAAAGCATCGGCATGCGGAATCCAGGCATATGTATT
CTTGGTTGCACTGACATACATGCATTCTGCAGAGATCTGGAGACCTGCCG
GACAAATGTCCTTTGGTCTGAGGATTTCAAGAAGAATCATCAGCTTAATG
CCGTCCTCATTCGAATGAATCGTGGATACTGGAAGTATGTTCACCAAGAC
ACACTCTCACCTTCACTCTTTCTGAGTCTCGCTAATAAGTCTGAGTACCC
TCGGCCATGCTTGGCATTCTTCTCCACTTTTCACGAGGGAAAAACCTCTG
CTGTTAGAGGGTTGATCAATCTCTTCGCGCGACTGTGACTCAAGTACATG
TGTGTTCTGCGCTGTACGCCTCGGCATATCTTTATTTGGTAGAAATACAA
ATACATCTAGACTGTGCGTGCACCTCTAGCTTCAAAAAGGTTCAGACGAG
TTTCGTGGAGTTCAAGGGCCATTTGACCGACAAGCCTCCACCAGTCGTGG
CGTTAAACACAGCAGCGCCCCAATGTTGTTTTTTCTCGGTAACAGTAGGC
TCAAGAAGACAGCGGTAGTTGGTGGTGGCCGTCTTGTGAACCAGTATCTA
GTCGTGAATTTCGTGAGGGCGCGAGCTGTAGTATGCTCGTTAGCAGAACC
CATTCCGACCACCTTCAAGCTGTTGTTCCCTTACTGCATTCGTTTCTTCC
GTTGCGCAGCTTGAAGAGGAGGCTCATCTGCTGGGTGGAACATGGCACAC
GCTCTGTGAAGATGATGAAACCACGGTAAACGCTGACAAATACAGCTCCA
ACGAGTTCTACTGTTGGCTGGTCGTCGATCCTTACGTGACTCCGACTCCG
AAGCCCATGGACGACGAGGAGTTTATCGAGATCAGGAGAGGCGTATCCAT
GCAAGAGTGCATGAGAATGGTAGGAAGGGGCAAACTTTCGATTGTATCGA
GTTTTGTTGTTCTTATGGGCGCCCGAAAATTGCGGCAACTAGGTCTGCTG
GAGGGCGATGTCTAGTCCACTGACCAATGGTCTATCATTCTGTTTGAAAG
CGGACGGTGGCTTCGAAGAAGTAGGCAGACAGCGCACTCCGGTATTGTAA
ATAAACGAGCTTACAATCCCTCAACGCGGGCCGCGCTGGAGACGGATCTT
ACAATTTTCACCAGGCCGTGGTTGCATATGATGGCGTACTCCACAACTTG
TTGCAAATTTTGATCGTGAACGGACAAAGTCAGAAGGTTCAACGCAGTTG
GGTGTCCGAGGCGTTTGACCTGTTGAGCGGTCAATTCATGCTTCTCGCTC
CCTGCTCAGCGGCCTGAGTGCACCCCTATTTTCCTGCCACGAGAAGAAGG
GGGTTGCGGGCTGCGCCTTTTGCGCGTGCCCGCCCCCTTCCACGTCTCAT
GGGCTGGTTGTTCTCTTGTTGTTATGGCGGTATGGTTTTCCCCGTCTGGA
CAGGGCTGTCTGGAGGCTAGGCTCAGCCTTCGTAGGCCGTCATCCCGACG
TTGATTGCTGTGTAGCGCTTGGAAGTGAAGACGTCTGAAGTGTATCCTGA
AGTATGATTTGAGAAATTTAGTGTGGTTTGCAGAGAGTTTTTTC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig850:6099..10542+

>mRNA_Ecto-sp13_S_contig850.19898.1 ID=mRNA_Ecto-sp13_S_contig850.19898.1|Name=mRNA_Ecto-sp13_S_contig850.19898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig850:6099..10542+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGTCCGTCTCTCGACCTCTGCTGGCTTTCGCTGCTGCAAGGGCACA
AGGGCGTCTTTTTTCCTTCGGGACGGCACGACATTGCGCTGGCTTCAGCG
GCCCTGTTGGGGAGGGCAAGCCACAGCATGACTTCAAAGTGTTGAACCGT
GACTTGGCGTATGCGGGATGGCGGAAGATTGTGAAGAAGACGGTTCGTGT
TGAGCACGAGAAAGACTACGTGTTCGATGTTGTCCATCAGGAGGAACCAT
CGGTGGCAGTTTTTGTTTGGCACACCCAAACCAATACTTTGACGCTGATC
AAGGAATTCGCTCCCGGGCGTGAGGAGGTGGCGCACGGGGTTGTGGCTGG
CATGTACGAGAAGAACAAACACGACTCCCCACTCCAGGCGGCCAAGTATG
AGCTTGAAGAGGAGGCTCATCTGCTGGGTGGAACATGGCACACGCTCTGT
GAAGATGATGAAACCACGGTAAACGCTGACAAATACAGCTCCAACGAGTT
CTACTGTTGGCTGGTCGTCGATCCTTACGTGACTCCGACTCCGAAGCCCA
TGGACGACGAGGAGTTTATCGAGATCAGGAGAGGCGTATCCATGCAAGAG
TGCATGAGAATGGTAGGAAGGGGCAAACTTTCGATTGTATCGAGTTTTGT
TGTTCTTATGGGCGCCCGAAAATTGCGGCAACTAGGTCTGCTGGAGGGCG
ATGTCTAG