mRNA_Ecto-sp13_S_contig840.19773.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig840.19773.1
Unique NamemRNA_Ecto-sp13_S_contig840.19773.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A6H5L5S9_9PHAE (ETF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5S9_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 4.440e-162
Identity = 259/267 (97.00%), Postives = 262/267 (98.13%), Query Frame = 1
Query:    1 MSRRLAMIGSRQLLSQPCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVAT-QANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQ 798
            MSRRLAMIGSRQLLSQ CRRQLSSLVVAEHDNSHLLP TLSAVTAAAQLNGDIT+LVLGH+SEG AKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVAT QANGA+SHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSES SGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQ
Sbjct:    1 MSRRLAMIGSRQLLSQACRRQLSSLVVAEHDNSHLLPGTLSAVTAAAQLNGDITMLVLGHESEGVAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVATVQANGAFSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESKSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQ 267          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A835ZFY6_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY6_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 2.170e-135
Identity = 222/316 (70.25%), Postives = 259/316 (81.96%), Query Frame = 1
Query:   58 RQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVATQANG-AYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            R  S+LVVAEH+N  L P TLSAVTAA ++ G++ +LVLG  S   A+ A+ VAGV+KVLH D PAY  ++AEN SR V   A    Y+H++A+SSMAGKNF+GRLGAE+D APVTD++KVVDE TF RPMYAGNA+ATV A+  LK+LTVRPT+F+KA ATGG+A+VE+ AP  +  + GL+ FVSESVS   RPDL  ARVVV+GGRG+K+GENF +LE LADKLGGAVGASRAAVDAG+V NELQVGQTGKVVAPELYI VGISGAIQHLSGMKDSKCIVAINKDKEAPIF  ADYGLVADLF AVPEL  K+
Sbjct:   27 RLASTLVVAEHNNKALSPGTLSAVTAAGKIGGEVHLLVLGSGSAPVAEAASKVAGVAKVLHGDHPAYAHFLAENTSRGVRASAEAHKYTHVMAISSMAGKNFIGRLGAEMDLAPVTDVIKVVDESTFERPMYAGNAIATVTASDPLKLLTVRPTAFDKAPATGGSAAVEA-APLPAEPETGLSKFVSESVSSSARPDLGAARVVVSGGRGMKNGENFAMLEALADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFTVADYGLVADLFTAVPELTKKL 341          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A5D6Y5S8_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S8_9STRA)

HSP 1 Score: 380 bits (975), Expect = 3.070e-124
Identity = 211/335 (62.99%), Postives = 257/335 (76.72%), Query Frame = 1
Query:    1 MSRRLAMIGSRQLLSQPCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRA-VATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            ++R++  IG R+  +    R LS+LVVAEH+   +   TLSAVTAA+QL GD+T+LVLG  + G A QAA +AGVS VLHA D  Y   +AE V+   VA Q    Y+HI+A SS A KN++ R+GA+LD AP++D+L V D++TF RPMYAGNA+A V ++ A+K+LTVRPT FEKA A GG+A+V    P       G  +FVSE VS  +RPDLT+ARVV+AGGRGLK G+NF++L KLADKLGGAVGASRAAVDAG+V NELQVGQTGKVVAPELY+ VGISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:    2 LARQMRQIG-RRAAALSSARSLSTLVVAEHNLKDVTGGTLSAVTAASQLGGDVTVLVLGSQAAGVAAQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQQANQYTHIVAPSSNASKNYIPRVGAKLDVAPISDVLAVADKDTFFRPMYAGNAIAKVTSSDAVKLLTVRPTGFEKAAAEGGSAAVS---PAPEAPTVGKTAFVSEEVSKSERPDLTSARVVIAGGRGLKSGDNFELLYKLADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 332          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A2D4CIU3_PYTIN (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU3_PYTIN)

HSP 1 Score: 376 bits (965), Expect = 8.220e-123
Identity = 207/316 (65.51%), Postives = 251/316 (79.43%), Query Frame = 1
Query:   58 RQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRA-VATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            R  S+LV+AEH+   +  STLSAVTAA+++ GD+T+LVLG  ++  A+ AA +AGVS VLHA D  Y   +AE+V+   VATQ   ++SHILA SS A KN++ RLGA+LD AP++DI+ V D++TF+RP YAGNA+A V++  A+KI+TVRPT FEKA A GG A+V   A PE+ A  G + FVSE VS  +RPDLT ARVV++GGRGLK GENF +L KLADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELY+ VGISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:   15 RSFSTLVIAEHNQKEVSGSTLSAVTAASKIGGDVTLLVLGSQADAVAQSAAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAVA--AAPEAAA-TGKSQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A8K1FT05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT05_PYTOL)

HSP 1 Score: 371 bits (952), Expect = 7.380e-121
Identity = 205/328 (62.50%), Postives = 255/328 (77.74%), Query Frame = 1
Query:   28 SRQLLSQ--PCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAV-ATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            +RQL+ +     R  S+LV+AEH+   +   TLS +TAA+++  D+T+LV+G  +EG A+ AA +AGVS VLHA D  +   +AE+V+  + ATQ    +SHILA SS A KN++ RLGA+LD AP++DI+ V D++TFVRP YAGNA+A V+++ A+K++TVRPT FEKA   GG+ASV   A PE+ A AG   FVSE VS  +RPDL +ARVV++GGRGLK GENF++L KLADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELY+  GISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:    3 ARQLVRRISSANRSFSTLVIAEHNQKEVTGGTLSTITAASKIGNDVTLLVIGSQAEGVAQAAAKIAGVSNVLHAKDAKFDHLIAEDVTELLLATQKEKNFSHILAPSSNASKNYLPRLGAKLDSAPISDIIAVADKDTFVRPTYAGNAIAQVKSSDAVKLITVRPTGFEKAAVEGGSASVS--AAPEAAA-AGKTQFVSEEVSKSERPDLGSARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: K3WS82_GLOUD (Electron transfer flavoprotein subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS82_GLOUD)

HSP 1 Score: 370 bits (951), Expect = 1.120e-120
Identity = 204/316 (64.56%), Postives = 243/316 (76.90%), Query Frame = 1
Query:   58 RQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRA-VATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            R LS+LVVAEH+   +   TLSAVTAA ++ GD+T+LVLG  + G A QAA +AGVS VLHA D  Y   +AE V+   VA Q    ++HILA SS A KN++ R+GA+LD AP++DIL V D++TF+RP YAGNA+A +++  A+K++TVRPT FEKA   GG+ASV    P    A  G   FVSE VS  DRPDLT+ARVVV+GGRGLK GENF++L KLADKL GAVGASRAAVDAG+V NELQVGQTGKVVAPELYI  GISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:   17 RSLSTLVVAEHNQKDVTGGTLSAVTAATKIGGDVTVLVLGSQAAGIADQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQKEKNFTHILAPSSNASKNYLPRVGAKLDVAPISDILAVADKDTFLRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAATEGGSASVS---PAPEAATVGKTQFVSEEVSKSDRPDLTSARVVVSGGRGLKSGENFEMLYKLADKLNGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 329          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: H3HBC2_PHYRM (Electron transfer flavoprotein subunit alpha n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3HBC2_PHYRM)

HSP 1 Score: 370 bits (950), Expect = 1.630e-120
Identity = 206/319 (64.58%), Postives = 242/319 (75.86%), Query Frame = 1
Query:   49 PCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRA-VATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            P    +S+LVVAEH+ S +  +TL+ VTAA Q+ GDIT+LVLG  +  AA+  A VAGV  VLHA D  Y  +VAE V+   VA Q  G YSH+LA SS A KN++ R GA+LD AP++DIL V D++TF RP YAGNA+A V++  A+K++TVRPT FEKA A GG ASV    P       G  SFVSE VS  +RPDL +ARVV++GGRGLK GENF++L KLADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELY+  GISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLV DLF+AVPEL  KV
Sbjct:   15 PRSSAMSTLVVAEHNQSQISGATLATVTAATQIGGDITLLVLGSQAGPAAEAGAKVAGVKNVLHAADAKYDHYVAEEVAELLVAAQTAGQYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNASVS---PAPEAPTVGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFELLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKV 330          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A067CIA0_SAPPC (Electron transfer flavoprotein subunit alpha n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIA0_SAPPC)

HSP 1 Score: 366 bits (940), Expect = 4.840e-119
Identity = 210/325 (64.62%), Postives = 244/325 (75.08%), Query Frame = 1
Query:   31 RQLLSQPCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVAT-QANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            R L      R  S+LVVAEH    L   TLSA+TAA+++ GDIT+LV G ++   A++AA V GV  VLHAD   Y   +AE V+  VA  QA  ++SHILA SS   KNFV RLGA LD AP+TD+L VVDE TF RPMYAGNA+ATV ++ A+K++T+RPT FEKA ATGG+ASV S AP  + A A L  FVSE  S  DRPDL +ARVVV+GGRG+K GENF++L  LADKL GAVGASRAAVDAGFV NELQVGQTGKVVAPELYI VGISGAIQHL+GMKDSK IVAINKD EAPIFQ +DYG+V DLF  VPEL  K+
Sbjct:    7 RALSKLSAARFASTLVVAEHAGQKLTGGTLSAITAASKIGGDITVLVSGSNTAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASV-SAAP--TAAPANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A485KD61_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KD61_9STRA)

HSP 1 Score: 365 bits (938), Expect = 1.000e-118
Identity = 208/316 (65.82%), Postives = 241/316 (76.27%), Query Frame = 1
Query:   58 RQLSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVAT-QANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            R  S+LVVAEH    L   TLSA+TAA+++ GD+T+LV G ++   AK+AA V GV  VLHAD   +   +AE ++  V T Q   ++SHI+A SS   KNF+ R+GA LD AP TD+L VVDE TF RPMYAGNA+ATV ++  +K+LTVRPT FEKA ATGG+ASV  TA P + A AGL SFVSE  S  DRPDLT+ARVVV+GGRG+K GENF +L  LADKL GAVGASRAAVDAGFV NELQVGQTGKVVAPELYI VGISGAIQHL+GMKDSK IVAINKD EAPIFQ ADYGLV DLF  VPEL  K+
Sbjct:   17 RFASTLVVAEHAGQKLTGGTLSAITAASKIGGDVTVLVAGSNTADVAKEAAAVQGVKSVLHADAAQFDHAIAEELTSLVVTIQQASSFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLAVVDENTFQRPMYAGNAIATVTSSDTVKLLTVRPTGFEKANATGGSASV--TAAPAAPA-AGLTSFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFGLLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVDDLFKVVPELTEKI 329          
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Match: A0A192IMB5_9HYPH (Electron transfer flavoprotein subunit beta n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IMB5_9HYPH)

HSP 1 Score: 362 bits (928), Expect = 1.600e-117
Identity = 195/313 (62.30%), Postives = 250/313 (79.87%), Query Frame = 1
Query:   64 LSSLVVAEHDNSHLLPSTLSAVTAAAQLNGDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVATQANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 1002
            ++ LV+AEHDN+ L P+TL+ VTAA  ++ D+T+LV+GH++ G A+ AA VAGV KVLHADD      +AEN +  + + A G Y HI+A S+ +GKN + R+ A LD   ++DI++V   +TFVRP+YAGNA+ATV+++  +K++TVR T+F KAEA GG+ASVE  A  +   D GL+SFV E +S  DRPDL TA++VV+GGRG+++GENF++L K+ADKLG AVGASRAAVDAGFV N++QVGQTGKVVAPELYI VGISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF AVPELESK+
Sbjct:    1 MAVLVIAEHDNNELNPATLATVTAAKAMDSDVTVLVMGHNAGGVAEAAAKVAGVGKVLHADDAGLEHSLAENRAALIVSLA-GDYGHIVAPSTTSGKNILPRVAALLDVQQISDIVEVESADTFVRPIYAGNAMATVQSSDGIKVITVRTTTFAKAEAEGGSASVEQIAAAD---DPGLSSFVGERLSESDRPDLATAKIVVSGGRGMQNGENFEMLYKVADKLGAAVGASRAAVDAGFVPNDMQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFQAVPELESKL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig840.19773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5S9_9PHAE4.440e-16297.00ETF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZFY6_9STRA2.170e-13570.25Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A5D6Y5S8_9STRA3.070e-12462.99Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A2D4CIU3_PYTIN8.220e-12365.51Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A8K1FT05_PYTOL7.380e-12162.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WS82_GLOUD1.120e-12064.56Electron transfer flavoprotein subunit alpha n=1 T... [more]
H3HBC2_PHYRM1.630e-12064.58Electron transfer flavoprotein subunit alpha n=23 ... [more]
A0A067CIA0_SAPPC4.840e-11964.62Electron transfer flavoprotein subunit alpha n=4 T... [more]
A0A485KD61_9STRA1.000e-11865.82Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A192IMB5_9HYPH1.600e-11762.30Electron transfer flavoprotein subunit beta n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig840contigEcto-sp13_S_contig840:1472..5009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score467.6
Seed ortholog evalue4.8e-129
Seed eggNOG ortholog2880.D8LPP8
Preferred nameETFA
Model size1923
KEGG koko:K03522
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575
Exons4
EggNOG free text desc.fatty acid beta-oxidation using acyl-CoA dehydrogenase
EggNOG OGsCOG2025@1,KOG3954@2759
Ec32 ortholog descriptionDHS-like NAD/FAD-binding domain
Ec32 orthologEc-18_002000.1
Cds size1005
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464110.1221778-CDS-Ecto-sp13_S_contig840:1471..16751681464110.1221778-CDS-Ecto-sp13_S_contig840:1471..1675Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig840 1472..1675 +
1681464110.1420362-CDS-Ecto-sp13_S_contig840:1864..19601681464110.1420362-CDS-Ecto-sp13_S_contig840:1864..1960Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig840 1865..1960 +
1681464110.1519763-CDS-Ecto-sp13_S_contig840:2847..33451681464110.1519763-CDS-Ecto-sp13_S_contig840:2847..3345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig840 2848..3345 +
1681464110.1619415-CDS-Ecto-sp13_S_contig840:3884..40911681464110.1619415-CDS-Ecto-sp13_S_contig840:3884..4091Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig840 3885..4091 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464110.174984-UTR-Ecto-sp13_S_contig840:4091..50091681464110.174984-UTR-Ecto-sp13_S_contig840:4091..5009Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig840 4092..5009 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig840.19773.1prot_Ecto-sp13_S_contig840.19773.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig840 1472..4091 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig840.19773.1

>prot_Ecto-sp13_S_contig840.19773.1 ID=prot_Ecto-sp13_S_contig840.19773.1|Name=mRNA_Ecto-sp13_S_contig840.19773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=335bp
MSRRLAMIGSRQLLSQPCRRQLSSLVVAEHDNSHLLPSTLSAVTAAAQLN
GDITILVLGHDSEGAAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVAT
QANGAYSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMY
AGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGL
ASFVSESVSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVG
ASRAAVDAGFVANELQVGQTGKVVAPELYIGVGISGAIQHLSGMKDSKCI
VAINKDKEAPIFQAADYGLVADLFDAVPELESKV*
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mRNA from alignment at Ecto-sp13_S_contig840:1472..5009+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig840.19773.1 ID=mRNA_Ecto-sp13_S_contig840.19773.1|Name=mRNA_Ecto-sp13_S_contig840.19773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3538bp|location=Sequence derived from alignment at Ecto-sp13_S_contig840:1472..5009+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGTCGACGACTGGCAATGATTGGATCGAGGCAACTGCTGTCACAGCC ATGCCGACGTCAACTGTCAAGCCTCGTCGTGGCCGAACACGACAACTCGC ATCTGCTCCCAAGCACTCTCAGTGCGGTGACTGCAGCGGCGCAGCTAAAC GGAGACATCACTATCCTTGTCCTGGGCCATGACTCCGAGGGCGCGGCGAA GCAGGTGAAAGAGAGGAAGTACGATGTACGAAGTAGCACGAAGCGCTCTG ACGATCTACTTCAAGTTCAACTTCGGTTCATCCGCTCCGGGAGAAACGCA CTTGTTTGTCAGAACTCCTGTAGATTCCATAACTTCGTTCGGTGCCTCCA CTCGCGTTTGCGTTGTTTTCGGTCACGCACACGGCTTGCGCAGGCAGCGC ACGTTGCTGGTGTTTCTAAGGTTCTGCATGCTGACGATCCAGCGTATGGA ACATGGGTCGCGGAAAACGTGTCCAGGGCTGTGGCGACGGTGCAGGCAAG GTTATACCGTTACACCGACGAAACAGAAACACTCAGCCCTGTTTGGTTGC ATTCTCTGTTTCCTGTCTCAGACGACGAACGTTGGCCCTGGGCGCCTTGT GTAAGAGATATTCAATCCAGATCACCCACACAGACCTGTGCTGCTGTAAC AGGATGGAGAGACGACGAAGGTGTACCCAACAAAGCAACTGCTGTGTGTG TGCATAGATCAAACAAGCACACAGCACCAACTGTGAGGAAACGCAGCAGG ACCGGGACATTACGATGGTGCGCCGACGCACGAGCTGAGGGCTTCTGCTT CTGTGGCTCGTAGTTTGGGTGGTTAGCTAAGATATTTTTGTGTTCGTACA AACGTGCCAAGGAGCACTCTATTATGCTCGCGTGACAACACCGCCGTATT TCATCTTCGTATCTTGGATGTTCAGCTTTCTCACTGCTGCAAAATGCGTG GTATACGTGCAGCAGTAGGCAACTGTTTTTCTCACACACCACCGCCAACG TGCTTTCAAGGAGAACAGTACCTCAGAATTCTCGGATGGTCGAGATTGTG ACACTACTGTTTAAATTAGAGAGCTCCGTCAAGAGACTTGTAGGTACATG GCCGTTTTGCTAAAAATGGAGACAGGCCCGCCGCAATTGTGTTCTTGATG AGAGCCGACCGTAACGACTCGTGCTGGTAGAGTACAAGTAGCTGGAAAAG AGGAGCACAAGGAGAAAGGAATATTTTGAATTACCATGGGCGTTGTTGTT CCGAGCGGTGGCCATGCTGTGTGAACAACCGCCGAGCAGGCATTCGTTCT GCATGAAAACACCATGTTATGCGATAATCCTAGTTCACATCCCACGACTC TTCTGGTCGTGTTCGCTTGTACGAAGCAGGCAAATGGAGCTTATTCTCAC ATCCTGGCTGTTTCCAGCATGGCCGGAAAAAACTTCGTGGGTCGGTTAGG AGCCGAGCTTGACTGTGCCCCCGTGACGGATATCCTCAAAGTAGTCGACG AGGAGACGTTCGTGCGACCGATGTACGCCGGGAATGCTGTTGCGACAGTA CGTGCAGCGGGTGCTTTGAAAATTCTGACGGTCAGACCCACCTCGTTCGA GAAAGCGGAGGCCACTGGAGGCACCGCATCAGTAGAGTCAACGGCGCCCC CTGAGAGTGGCGCCGACGCTGGTCTAGCGTCTTTCGTATCTGAATCCGTA AGCGGAGGGGACCGACCGGACCTTACAACGGCGAGGGTGGTTGTGGCTGG CGGCCGTGGATTGAAGGACGGCGAGAACTTCAAAATCCTGGAGAAGTTAG CAGACAAACTTGGAGGAGCAGTAGGAGCCTCGAGAGCGGCTGTTGATGCT GGCTTTGTGGCAAACGAACTGCAGGTAGGAGATTTGGTAGGGTATGCATG AACCCTGTCGAAAATCAACGTGTAAACGGAATTACGGTACAAGTCTAGAT GACTCTTTTGTGCGCGCTGAGCATGGTTGTTTCAAAACATCCTCGTTTCT AGGAATGCTCCAGAACATGTCACACATGTGTTCGTTGAGTGCTGATGCGT TTGTGTGCTGATAATCTTATTAGCGTGAGCCGTTCTAGACGAAGGAGGGG CTCAATCTTGCTTTACCGAAGCCGGATGCAGATACTTCTGTCAGCATACC GTATACACTGCTGTTTTCGAGTTGTGTGTAACATCTGGCGTTTCACACAG GTCGACCTTGAGGCACTTTGATCCGGAGTACTCATTCGCCAACGATGCAC AGGCCCTCAAAAGTGGACTTTAATGTTGGAGGCGCTTGTGTCAACCTGCC GATCATGATTTCTCGTACAACTATTGATGCACACAGTTGGTGTGTAGACT GCACAAGAGGTAGGGTAGGCTTTGACTGCGACATTCTTCGTTTGCTCAAA AAAATTTGAACAGGTGGGCCAAACAGGCAAGGTGGTGGCACCCGAACTAT ACATTGGGGTTGGTATTTCTGGGGCAATCCAGCACTTGTCTGGCATGAAA GACAGCAAATGCATTGTGGCCATCAACAAGGACAAGGAGGCCCCCATATT CCAGGCGGCTGACTACGGCTTGGTCGCTGATCTTTTCGACGCCGTGCCCG AGCTAGAATCGAAAGTTTAACTTCGGGGCGAAGAGAGTGGGAAATAACGT GATTACGGTGATGTAAAGGTGGTTTTAATCTTGTGCCCGTTGGGAGCCAT GTGATCACTCCTCATACCCAGTCAGAAGTGGTGTCCTACCCGCGAACTTT CCAGTGAACTTTGGGGACGGTAAGCAGTGTAAATAGGGGCATGTGTGGAT CACGTGTTCGCAGGGTCGCATTTGTCGAGGAGGGGTACTGTTAGGCAAAG TTGGCAAAGGTCTGTTCAACAGCACTCGAGAGTAGGAGAGGTTGAGAATT GGCAGACGGCACGTTTTCGGCGTTGGAGAGGTTCCGAGTGGATCCCCCGA GACTCTATCCATAATAGAACTAGGTTCAACCAAGCTCCCTTGGTGCACCT GGACCCCCGTATGTAATCGCCAGCGCTTGAGTTCGACAGTTTTTGGGTTG TGGTTGGAGGTAGACACGAAACCAAAGCCACTGACAGGTTTCCAGCCCTC AGGCTTCACGGCGCTAGGCCTCACTGTTGTTGGTATAACCCGCCCTTAAC CCTAAATCTAACCCACATCACAAGCTAGGTTGTTGCTCAGTGGGTAGGCC TAGGTCGCTGTACCGAGCTACTGGAGCACGCTTCGCGCTCGCGAGCCCTG GCGTATATACGCCTCGCGGGTGGATCTGCGCTGAGAGCTTACAACCAGTT CATGACGTGTTCCAAGGAGGATCAGTGAGGATTGTCGAGGTCTAGGAACA TGGCCACAACATTGAAAAGCGAGAGTATCCATGAGTAACGTTCAACCACA TCAGCGGTGCGAGTGATCTAGTAGCACAGTGCGTGCAGCAGTAGCAGCAG CATTGTGCCAGACCAAGCCGCCAAACGCTAACGTCAACGATGCTTTTTTT GCCCCAAGATGTTTTTTGGGCCCTCACAACGAAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig840:1472..5009+

>mRNA_Ecto-sp13_S_contig840.19773.1 ID=mRNA_Ecto-sp13_S_contig840.19773.1|Name=mRNA_Ecto-sp13_S_contig840.19773.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1005bp|location=Sequence derived from alignment at Ecto-sp13_S_contig840:1472..5009+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGTCGACGACTGGCAATGATTGGATCGAGGCAACTGCTGTCACAGCC
ATGCCGACGTCAACTGTCAAGCCTCGTCGTGGCCGAACACGACAACTCGC
ATCTGCTCCCAAGCACTCTCAGTGCGGTGACTGCAGCGGCGCAGCTAAAC
GGAGACATCACTATCCTTGTCCTGGGCCATGACTCCGAGGGCGCGGCGAA
GCAGGCAGCGCACGTTGCTGGTGTTTCTAAGGTTCTGCATGCTGACGATC
CAGCGTATGGAACATGGGTCGCGGAAAACGTGTCCAGGGCTGTGGCGACG
CAGGCAAATGGAGCTTATTCTCACATCCTGGCTGTTTCCAGCATGGCCGG
AAAAAACTTCGTGGGTCGGTTAGGAGCCGAGCTTGACTGTGCCCCCGTGA
CGGATATCCTCAAAGTAGTCGACGAGGAGACGTTCGTGCGACCGATGTAC
GCCGGGAATGCTGTTGCGACAGTACGTGCAGCGGGTGCTTTGAAAATTCT
GACGGTCAGACCCACCTCGTTCGAGAAAGCGGAGGCCACTGGAGGCACCG
CATCAGTAGAGTCAACGGCGCCCCCTGAGAGTGGCGCCGACGCTGGTCTA
GCGTCTTTCGTATCTGAATCCGTAAGCGGAGGGGACCGACCGGACCTTAC
AACGGCGAGGGTGGTTGTGGCTGGCGGCCGTGGATTGAAGGACGGCGAGA
ACTTCAAAATCCTGGAGAAGTTAGCAGACAAACTTGGAGGAGCAGTAGGA
GCCTCGAGAGCGGCTGTTGATGCTGGCTTTGTGGCAAACGAACTGCAGGT
GGGCCAAACAGGCAAGGTGGTGGCACCCGAACTATACATTGGGGTTGGTA
TTTCTGGGGCAATCCAGCACTTGTCTGGCATGAAAGACAGCAAATGCATT
GTGGCCATCAACAAGGACAAGGAGGCCCCCATATTCCAGGCGGCTGACTA
CGGCTTGGTCGCTGATCTTTTCGACGCCGTGCCCGAGCTAGAATCGAAAG
TTTAA
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