mRNA_Ecto-sp13_S_contig83852.19751.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5KJM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM6_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.960e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FYDRMRPYLPLLELLERDVPST DGTTSSVVY+LPVNLLLDRVMQIPSETALSNAYP GQLLRGEEATANSL
Sbjct: 257 FYDRMRPYLPLLELLERDVPSTDDGTTSSVVYDLPVNLLLDRVMQIPSETALSNAYPGGQLLRGEEATANSL 328
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5K0J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J4_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.970e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FYDRMRPYLPLLELLERDVPST DGTTSSVVY+LPVNLLLDRVMQIPSETALSNAYP GQLLRGEEATANSL
Sbjct: 248 FYDRMRPYLPLLELLERDVPSTDDGTTSSVVYDLPVNLLLDRVMQIPSETALSNAYPGGQLLRGEEATANSL 319
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5JG22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG22_9PHAE) HSP 1 Score: 125 bits (313), Expect = 9.700e-33 Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FYDRMR YLPLLELLERDVPS HDGTTSSVVY+LPVNLLL+RVMQIPSET LS AYP +LLRGEEA ANSL
Sbjct: 247 FYDRMRTYLPLLELLERDVPSIHDGTTSSVVYDLPVNLLLERVMQIPSETVLSEAYPGWELLRGEEAAANSL 318
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5JSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ8_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.550e-32 Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FYD MRPYLPLLELLERDVPSTHDGTTSSVV +LPVNLLLDRVMQIPSETALS AYP G+LLRGEEA AN L
Sbjct: 138 FYDCMRPYLPLLELLERDVPSTHDGTTSSVVCDLPVNLLLDRVMQIPSETALSEAYPGGKLLRGEEAAANLL 209
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.340e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FY RMRPYLP+L+LLERDVPSTHDG TSSV Y++PVNLLLDRVMQI SETALS AYP G++LRGEEA AN L
Sbjct: 328 FYGRMRPYLPMLQLLERDVPSTHDGGTSSV-YDIPVNLLLDRVMQIQSETALSEAYPGGKILRGEEAAANRL 398
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: D7FUZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ8_ECTSI) HSP 1 Score: 106 bits (264), Expect = 9.430e-27 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
F +RMR YLPLL++LERDVPST G TS+VVY++PVNLLLDR M++ SETALS AYP G+LLRGEEA NSL
Sbjct: 21 FSNRMRQYLPLLQILERDVPSTQQGKTSAVVYDVPVNLLLDRDMKLASETALSEAYPAGKLLRGEEAAMNSL 92
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5JWC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC0_9PHAE) HSP 1 Score: 103 bits (256), Expect = 5.130e-24 Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
F +RMR YLPLL++LERDVPST G TS+VVY++PVNLLLDR M++ SETALS AYP G+LLR EEA NSL
Sbjct: 223 FSNRMRQYLPLLQVLERDVPSTQQGKTSAVVYDVPVNLLLDRDMKLASETALSEAYPAGKLLREEEAAVNSL 294
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5K2F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F5_9PHAE) HSP 1 Score: 102 bits (255), Expect = 6.200e-24 Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
FY RMRPYLPLL+L++RDVPS D T SS V+++PVNLLL R MQI SETALS +P G+LLRGEE ANSL
Sbjct: 310 FYSRMRPYLPLLQLIKRDVPSAADETASSAVFDIPVNLLLHRTMQIESETALSETHPGGKLLRGEEIEANSL 381
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5KML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML3_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.680e-21 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 13 MRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
MRPYLPLL+L++RDVPS D T SS V+++PVNLLL R MQI SETALS +P G+LLRGEE ANSL
Sbjct: 1 MRPYLPLLQLIKRDVPSAADETASSAVFDIPVNLLLHRTMQIESETALSETHPGGKLLRGEEIEANSL 68
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Match: A0A6H5KS83_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS83_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.310e-21 Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 FYDRMRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNAYPEGQLLRGEEATANSL 216
F +RMR YLPLL +LER+VPST +G +S+VVY++PVNLLL R M++ SETALS Y G++LRGEEA ANSL
Sbjct: 205 FNNRMRQYLPLLRVLERNVPSTQEGKSSAVVYDVPVNLLLARDMKLVSETALSETYAAGKILRGEEAAANSL 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83852.19751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig83852.19751.1 >prot_Ecto-sp13_S_contig83852.19751.1 ID=prot_Ecto-sp13_S_contig83852.19751.1|Name=mRNA_Ecto-sp13_S_contig83852.19751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp MRPYLPLLELLERDVPSTHDGTTSSVVYELPVNLLLDRVMQIPSETALSNback to top mRNA from alignment at Ecto-sp13_S_contig83852:355..570- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig83852.19751.1 ID=mRNA_Ecto-sp13_S_contig83852.19751.1|Name=mRNA_Ecto-sp13_S_contig83852.19751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83852:355..570- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig83852:355..570- >mRNA_Ecto-sp13_S_contig83852.19751.1 ID=mRNA_Ecto-sp13_S_contig83852.19751.1|Name=mRNA_Ecto-sp13_S_contig83852.19751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig83852:355..570- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |