mRNA_Ecto-sp13_S_contig8376.19744.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: D7G2I9_ECTSI (Coiled-coil domain-containing protein 86 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I9_ECTSI) HSP 1 Score: 299 bits (766), Expect = 5.340e-99 Identity = 193/239 (80.75%), Postives = 195/239 (81.59%), Query Frame = 2
Query: 104 MRTRSREGTGGGEPAEAGALVSLPLQPPRSSKKRKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPGKTGEKEGESRSKTSKSASKAGEHNAAAVGGKEGQSLGKDKDGKRAHDGPITAADRMGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLRQ 820
MRTRSREGTGGGEP EA ALVSLPLQPPRSSKKR XXXXXXXXXXX TPGK GEKEGES+SKT KSASKAGEH+ AAVGGKEGQSLGKDKDGKRAHDGPITAADRMGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIED QNEMKNTTYQTISKTHKMKTMSKKQLRQ
Sbjct: 1 MRTRSREGTGGGEPVEAEALVSLPLQPPRSSKKRXXXXXXXXXXXXXXATKKSKEVANSLEPPAPTAPEAITPGKAGEKEGESQSKTKKSASKAGEHDVAAVGGKEGQSLGKDKDGKRAHDGPITAADRMGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDXXXXXXXXXXXXXQNEMKNTTYQTISKTHKMKTMSKKQLRQ 239
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A836C9I7_9STRA (Coiled-coil domain-containing protein 86 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.240e-22 Identity = 65/104 (62.50%), Postives = 79/104 (75.96%), Query Frame = 2
Query: 509 GRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLRQ 820
GR VSGR WK+R+QSQRA QRTT T+ LSSSW K + K A+ E+EMR+AK+ E E K KLEREKRR +NEMK++T+QTI+KTHK+K MSKKQLRQ
Sbjct: 6 GRNVSGRLWKSRSQSQRAIAQRTTGTKELSSSWKAKEAERTKLAAVKQKEREMREAKIAEKEALKAAKLEREKRRAENEMKSSTFQTITKTHKLKGMSKKQLRQ 109
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A067C5E8_SAPPC (Coiled-coil domain-containing protein 86 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5E8_SAPPC) HSP 1 Score: 82.4 bits (202), Expect = 5.180e-16 Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 2
Query: 503 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLRQ 820
P+G+ VS R WK + Q+QR SM AT+TLS++W +K+ +KAK++ + +E E+ K QE DKK + E+EKRR NEMK++T Q ISKTHK+KTMSKKQLRQ
Sbjct: 11 PRGQPVSNRPWK-KTQTQRKSMMTYKATKTLSTTWDEKMAMKAKKKEMKDLEHEIAARKKQERLDKKIAREEKEKRRMANEMKSSTVQQISKTHKLKTMSKKQLRQ 115
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A1V9Z366_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z366_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.010e-15 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 2
Query: 503 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
P+G+ VSGR WK + Q+ R SM AT+TLS++W +K+ +KAK++ + +E E+ K QE DKK + E+EKRR +NEMK+ T Q ISKTHK+KTMSKKQLR
Sbjct: 11 PRGKPVSGRPWK-KAQTARKSMMTYKATKTLSTTWEEKMAMKAKKKEMKDLEHEIAARKRQERLDKKLAREEKEKRRLENEMKSATVQNISKTHKLKTMSKKQLR 114
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A6G0X8C4_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X8C4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.130e-12 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2
Query: 473 ITAADRMGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
+ A + AP+G+ VSGR WK + Q + SM AT+TLS++W +K+ KAK++ + +E+E+ + K QE DK+ + E+EKRR NE+K+ + Q I KT K+KTMSKKQLR
Sbjct: 4 VAAEAKKNEAPRGKPVSGRFWK-KPQKAKNSMMTFKATKTLSTTWEEKMAAKAKKKEMKELEQEIANRKKQEKIDKRLAREEKEKRRMANELKSASVQVIRKTGKLKTMSKKQLR 117
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A024TTD3_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TTD3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.960e-12 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 473 ITAADRMGVAP-KGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
+TA++ V P +G VSGR WK + Q + SM AT+TLS++W +K+ KAK++ + +E E+ + K QE DK+ + E+EKRR NE K +T Q I KTHK+KTMSKKQLR
Sbjct: 2 VTASEAKKVEPPRGVPVSGRSWK-KPQRAKNSMMTFKATKTLSTTWDEKMAAKAKKKEMKELEHEIANRKKQEKIDKRVAREEKEKRRIANEFKASTLQVIKKTHKLKTMSKKQLR 116
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A418AT06_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AT06_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 8.890e-11 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 473 ITAADRMGVAP-KGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
+TA++ V P +G VSGR WK + Q + SM AT+TLS++W +K+ KAK++ + +E E+ + K QE DK+ + E+EKRR NE K +T Q I KTHK+KTMSKKQLR
Sbjct: 2 VTASEAKKVEPPRGVPVSGRSWK-KPQRAKNSMMTFKATKTLSTTWDEKMAAKAKKKEMKELEHEIANRKKQEKIDKRVAREEKEKRRIANEFKASTLQVIKKTHKLKTMSKKQLR 116
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A418DN57_9STRA (RTR1-type domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DN57_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 7.690e-10 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 2
Query: 503 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
P+G VSGR WK + Q + SM AT+TLS++W +K+ K+K++ + +E E+ + K QE DK+ + E+EKRR NE K +T Q I KTHK+K+MSKKQLR
Sbjct: 13 PRGVPVSGRSWK-KTQRSKNSMMTYKATKTLSTTWDEKMAAKSKKKEMKDLEHEIANRKKQEKVDKRVAREEKEKRRVANEFKASTLQVIKKTHKLKSMSKKQLR 116
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A397AAW9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AAW9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.730e-10 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 2
Query: 503 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLR 817
P+G VSGR WK + Q + SM AT+TLS++W +K+ K+K++ + +E E+ + K QE DK+ + E+EKRR NE K +T Q I KTHK+K+MSKKQLR
Sbjct: 13 PRGVPVSGRSWK-KTQRSKNSMMTYKATKTLSTTWDEKMAAKSKKKEMKDLEHEIANRKKQEKVDKRVAREEKEKRRIANEFKASTLQVIKKTHKLKSMSKKQLR 116
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Match: A0A6U1MPN8_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MPN8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.790e-8 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 2
Query: 470 PITAADRMGVAPKGRCVSGRDWK-ARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKKQEKLEREKRRQQNEMKNTTYQTISKTHKMKTMSKKQLRQ 820
P+ AA +A +GR VSGR+WK +RN+S S Q T + LSSSW +K + K++ +E+E+++ Q+ E RRQQN +K TTYQTI+K HK+KT+SKKQLRQ
Sbjct: 2 PLVAA---AMAKQGRNVSGRNWKKSRNKS---STQVTKVVKQLSSSWQQKQLERDKKRRTKEIEEEIKERARQDKEXXXXXXXXXAARRQQNLLKATTYQTITKVHKLKTLSKKQLRQ 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8376.19744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8376.19744.1 >prot_Ecto-sp13_S_contig8376.19744.1 ID=prot_Ecto-sp13_S_contig8376.19744.1|Name=mRNA_Ecto-sp13_S_contig8376.19744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp MRTRSREGTGGGEPAEAGALVSLPLQPPRSSKKRKAANSGSSGPSTPAATback to top mRNA from alignment at Ecto-sp13_S_contig8376:4970..6906+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8376.19744.1 ID=mRNA_Ecto-sp13_S_contig8376.19744.1|Name=mRNA_Ecto-sp13_S_contig8376.19744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1937bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8376:4970..6906+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8376:4970..6906+ >mRNA_Ecto-sp13_S_contig8376.19744.1 ID=mRNA_Ecto-sp13_S_contig8376.19744.1|Name=mRNA_Ecto-sp13_S_contig8376.19744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8376:4970..6906+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |