mRNA_Ecto-sp13_S_contig8355.19717.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8355.19717.1
Unique NamemRNA_Ecto-sp13_S_contig8355.19717.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: D7FJX2_ECTSI (Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX2_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 8.010e-178
Identity = 242/245 (98.78%), Postives = 244/245 (99.59%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            SIREDLEWMGWKPV+TTYSSDSFQLLYDMAIKLI+GGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQM EGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR
Sbjct:   81 SIREDLEWMGWKPVQTTYSSDSFQLLYDMAIKLIEGGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMGEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 325
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A835Z3U2_9STRA (Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3U2_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 6.170e-138
Identity = 189/245 (77.14%), Postives = 214/245 (87.35%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            S+RED+ W+GW PVETT+SSD+FQ LYD A++LIK GKAYVCHQTKDDI +CR+IAK   ADPN   GDP SPWR RP +E+L LF  MR G+++E +ATLRLKMDMTS NPNMWDQ+AYR+RY PHPHAGD WC+YPTYDYTHC+VDS+E IDYSICTLEFE+RRESYYWLLEAL++YRPKVYEFARLNIT TVLSKR+LLKLVK G VRGWDDPRMPTIK LRRRGYTAE LN FC DIGV+R
Sbjct:   71 SLREDVSWLGWTPVETTFSSDNFQQLYDYAVQLIKEGKAYVCHQTKDDISRCRDIAKAKIADPNT-PGDPNSPWRERPREENLRLFGDMRKGKLEENAATLRLKMDMTSSNPNMWDQIAYRIRYTPHPHAGDNWCIYPTYDYTHCIVDSIEHIDYSICTLEFESRRESYYWLLEALNIYRPKVYEFARLNITYTVLSKRRLLKLVKQGLVRGWDDPRMPTIKSLRRRGYTAEALNAFCTDIGVSR 314
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: W7TED8_9STRA (Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED8_9STRA)

HSP 1 Score: 384 bits (987), Expect = 1.540e-127
Identity = 179/245 (73.06%), Postives = 209/245 (85.31%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            S+RED+EW+GW P +TT++SD F  LYD+A++LI+  KAYVCHQT + I K R IAK  A +P+   GDP SPWR+RP++ESL LFE MR G+  E  ATLR+KMDM+SPN NM+DQVAYR+++IPHPHAGD W VYPTYD+THC++DSLE IDYSICTLEFETRRESYYW+LEALDLYRPKVYEF+RLNIT TVLSKRKLLKLVK   V GWDDPRMPTIKGLRRRGYTA+ILN FC+DIGVTR
Sbjct:  100 SLREDVEWLGWTPAQTTFTSDYFDQLYDLAVRLIRADKAYVCHQTGEQISKSRSIAKEKAVNPHFE-GDPNSPWRDRPIEESLRLFEDMRLGKFKENEATLRMKMDMSSPNFNMYDQVAYRIKFIPHPHAGDTWVVYPTYDFTHCIIDSLEHIDYSICTLEFETRRESYYWVLEALDLYRPKVYEFSRLNITYTVLSKRKLLKLVKAKWVAGWDDPRMPTIKGLRRRGYTADILNAFCKDIGVTR 343
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A024TFW5_9STRA (Glutamine-tRNA ligase, variant n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFW5_9STRA)

HSP 1 Score: 341 bits (874), Expect = 6.550e-113
Identity = 161/253 (63.64%), Postives = 197/253 (77.87%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANA--------GDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LY  A++LI+ G+AYVCHQ+K +I   R I +      +A              SP+RNR V E+L  FE+MR G+  EG+A+LRLKM + SPNPNMWD VAYR++++PHPH GDKWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR
Sbjct:   97 AIRANVDWLGWKPWKTTYSSEYFDQLYAFALELIQKGRAYVCHQSKAEIEASRTILRDLHGRASAEGLVLTEDVLAAAASPYRNRSVAENLAQFERMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDQLDLYKPTVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTR 349
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A6G0X631_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X631_9STRA)

HSP 1 Score: 345 bits (884), Expect = 3.220e-112
Identity = 165/253 (65.22%), Postives = 200/253 (79.05%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKV---NAADPNANAGDPC-----SPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LYD AI+LIK G+AYVCHQ+K +I   R I +     AA               SP+RNR V+E+L  FEKMR G+  EG+A+LRLKM + SPNPNMWD VAYR++++PHPH GDKWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P+VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC++IGVTR
Sbjct:   89 AIRANVDWLGWKPWKTTYSSEYFDELYDFAIQLIKKGRAYVCHQSKAEIEASRSILRDLHGRAASEGFQLTPELLAPAESPYRNRSVEENLVHFEKMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDQLDLYKPQVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKEIGVTR 341
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A397A200_9STRA (tRNA-synt_1c domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A200_9STRA)

HSP 1 Score: 336 bits (861), Expect = 7.930e-112
Identity = 159/253 (62.85%), Postives = 195/253 (77.08%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANA--------GDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LY  A++LI  G+AYVCHQ+K +I   R I +      +A              SP+RNR V ++L  FE+MR G+  EG+A+LRLKM + SPNPNMWD VAYR++++PHPH G KWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR
Sbjct:  105 AIRANVDWLGWKPWKTTYSSEYFDQLYAFALELIHKGRAYVCHQSKAEIEASRSILRDLHGRASAEGLVLTESVLAAAASPFRNRSVADNLRQFERMRRGEYAEGAASLRLKMHLDSPNPNMWDFVAYRIKFVPHPHIGSKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDVLDLYKPTVYEFARLNITFTVLSKRKLLKLVTHGLVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTR 357
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A067CIY7_SAPPC (Glutaminyl-tRNA synthetase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIY7_SAPPC)

HSP 1 Score: 343 bits (879), Expect = 8.970e-112
Identity = 162/254 (63.78%), Postives = 199/254 (78.35%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREI---------AKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LY+ AIKLIK G+AYVCHQ+K DI  CR +         ++     P   A    SP+RNR V ++L  FE MR GQ  EG+A+LRLKM + SPNPNMWD VAYR++++PHPH GDKWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLN+T TV+SKRKLLKLV  G VRGWDDPR+ T+ GL+RRG++A ILN FC++IGVTR
Sbjct:   92 AIRANVDWLGWKPWKTTYSSEYFDELYEFAIKLIKKGRAYVCHQSKADIEACRSVLRDLHGRVASEGLVLTPQVLAAAE-SPFRNRSVDDNLKHFEMMRRGQYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDQLDLYKPMVYEFARLNMTYTVMSKRKLLKLVTKGVVRGWDDPRLSTLNGLKRRGFSAPILNAFCKEIGVTR 344
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: D8LZ07_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZ07_BLAHO)

HSP 1 Score: 338 bits (867), Expect = 8.780e-111
Identity = 154/245 (62.86%), Postives = 194/245 (79.18%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +I ED++W+GW P + T+ SD F  LY+ A++LIK GKAYV HQT ++I + REIA+  + +      +P SPWRNR V+E+L LFE MR G+  EG ATLR+K+DM SPNP MWD VAYR++++PHPH GDKWC+YP+YD+ HCLVDSLE IDYS+CTLEFETRRESYYWL++ L+L+R  V+EF RLN+T TV+SKRKL +LV  G VRGWDDPRMPTIKGLRRRG+T + +N FC DI VTR
Sbjct:   75 NIMEDVKWLGWTPSQVTFGSDYFDKLYEYAVQLIKMGKAYVDHQTPEEIKRSREIAQECSREGGRKDLNPESPWRNRSVEENLRLFEDMRKGKFAEGEATLRMKIDMRSPNPCMWDPVAYRIKHVPHPHVGDKWCIYPSYDFQHCLVDSLEHIDYSLCTLEFETRRESYYWLVDQLNLWRAYVWEFGRLNLTNTVMSKRKLKELVADGVVRGWDDPRMPTIKGLRRRGFTPDAINNFCADISVTR 319
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BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A024THX4_9STRA (Glutamine-tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THX4_9STRA)

HSP 1 Score: 341 bits (874), Expect = 1.360e-110
Identity = 161/253 (63.64%), Postives = 197/253 (77.87%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKVNAADPNANA--------GDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LY  A++LI+ G+AYVCHQ+K +I   R I +      +A              SP+RNR V E+L  FE+MR G+  EG+A+LRLKM + SPNPNMWD VAYR++++PHPH GDKWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR
Sbjct:   97 AIRANVDWLGWKPWKTTYSSEYFDQLYAFALELIQKGRAYVCHQSKAEIEASRTILRDLHGRASAEGLVLTEDVLAAAASPYRNRSVAENLAQFERMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDQLDLYKPTVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTR 349
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Match: A0A1W0A4N3_9STRA (Glutaminyl-tRNA synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4N3_9STRA)

HSP 1 Score: 340 bits (872), Expect = 1.680e-110
Identity = 162/254 (63.78%), Postives = 199/254 (78.35%), Query Frame = 1 
Query:    1 SIREDLEWMGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREI---------AKVNAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR 735
            +IR +++W+GWKP +TTYSS+ F  LYD AI+LIK G+AYVC+Q+K +I  CR I         ++     P   A    SP+RNR V E+L  FEKMR G+  EG A+LRLKM + SPNPNMWD VAYR++++PHPH GDKWC+YPTYDYTHC+VD+LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLN+T TV+SKRKLLKLV  G VRGWDDPR+ T+ GL+RRG++A ILN FC++IGVTR
Sbjct:   89 AIRANVDWLGWKPWKTTYSSEYFDQLYDFAIQLIKKGRAYVCYQSKAEIEACRTILRDLHGRVASEGLVLTPKVLAAAE-SPYRNRSVAENLLHFEKMRRGEYAEGEASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIVDALEHIDYSICTLEFETRRESYYWLLDQLDLYKPMVYEFARLNMTYTVMSKRKLLKLVTKGIVRGWDDPRLSTLNGLKRRGFSARILNAFCKEIGVTR 341
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8355.19717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJX2_ECTSI8.010e-17898.78Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus sili... [more]
A0A835Z3U2_9STRA6.170e-13877.14Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus... [more]
W7TED8_9STRA1.540e-12773.06Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A024TFW5_9STRA6.550e-11363.64Glutamine-tRNA ligase, variant n=1 Tax=Aphanomyces... [more]
A0A6G0X631_9STRA3.220e-11265.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A397A200_9STRA7.930e-11262.85tRNA-synt_1c domain-containing protein n=3 Tax=Aph... [more]
A0A067CIY7_SAPPC8.970e-11263.78Glutaminyl-tRNA synthetase n=2 Tax=Saprolegnia Tax... [more]
D8LZ07_BLAHO8.780e-11162.86Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A024THX4_9STRA1.360e-11063.64Glutamine-tRNA ligase n=2 Tax=Aphanomyces invadans... [more]
A0A1W0A4N3_9STRA1.680e-11063.78Glutaminyl-tRNA synthetase n=1 Tax=Thraustotheca c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8355contigEcto-sp13_S_contig8355:752..6387 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score500.4
Seed ortholog evalue4.7e-139
Seed eggNOG ortholog2880.D7FJX2
Model size735
KEGG rclassRC00055,RC00523
KEGG koko:K01883,ko:K01885,ko:K01886
KEGG ReactionR03650,R03652,R05578
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons5
EggNOG free text desc.glutaminyl-tRNA aminoacylation
EggNOG OGsCOG0008@1,COG0215@1,KOG1148@2759,KOG2007@2759
EC6.1.1.16,6.1.1.17,6.1.1.18
Cds size711
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8355.19717.1prot_Ecto-sp13_S_contig8355.19717.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8355 752..6363 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464105.6422622-CDS-Ecto-sp13_S_contig8355:751..9041681464105.6422622-CDS-Ecto-sp13_S_contig8355:751..904Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8355 752..904 -
1681464105.6611767-CDS-Ecto-sp13_S_contig8355:1288..14241681464105.6611767-CDS-Ecto-sp13_S_contig8355:1288..1424Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8355 1289..1424 -
1681464105.6713953-CDS-Ecto-sp13_S_contig8355:1788..19941681464105.6713953-CDS-Ecto-sp13_S_contig8355:1788..1994Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8355 1789..1994 -
1681464105.6842356-CDS-Ecto-sp13_S_contig8355:3991..41261681464105.6842356-CDS-Ecto-sp13_S_contig8355:3991..4126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8355 3992..4126 -
1681464105.693199-CDS-Ecto-sp13_S_contig8355:6282..63631681464105.693199-CDS-Ecto-sp13_S_contig8355:6282..6363Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8355 6283..6363 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464105.7046814-UTR-Ecto-sp13_S_contig8355:6363..63871681464105.7046814-UTR-Ecto-sp13_S_contig8355:6363..6387Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8355 6364..6387 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8355.19717.1

>prot_Ecto-sp13_S_contig8355.19717.1 ID=prot_Ecto-sp13_S_contig8355.19717.1|Name=mRNA_Ecto-sp13_S_contig8355.19717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
MGWKPVETTYSSDSFQLLYDMAIKLIKGGKAYVCHQTKDDIFKCREIAKV
NAADPNANAGDPCSPWRNRPVQESLDLFEKMRTGQMDEGSATLRLKMDMT
SPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLVDSLEDIDYSIC
TLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGG
KVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTR
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mRNA from alignment at Ecto-sp13_S_contig8355:752..6387-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8355.19717.1 ID=mRNA_Ecto-sp13_S_contig8355.19717.1|Name=mRNA_Ecto-sp13_S_contig8355.19717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8355:752..6387- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCATTCGGGAGGACCTGGAGTGGATGGGATGGAAGCCAGTGGAGACCAC
GTACTCTTCGGACTCGTTCCAGCTGCTGTATGACATGGCCATCAAGCTCA
TCAAGGTACGCACGAGGTGGCAAGCAGCGTGTTGGGTGTGTGTACAGGAC
GTGTGCTTCAGGTCTCTGAATGGGGTTGGTTTTTGTTGTTCGTTGCGCTT
GTGGATGAAAGAGTGCTGCGTGCTGTTGAGTACGACATACAACACAGCTT
TGATGAAAAGATGCAAGGTGAAGCAGACTGCCGCGGATCGGCGTAAAATC
ACTTTTTTCGGCGAAGGCTCTTTTCGGCGAAGGCAGTCTAGTCGTCGCTC
GTGAGACTGAGTCAATTGTTCGCAGCAGCATGTGAAGTGCACCATGTCTA
CGACCATGACGATCGAATTCAATGAGTGACTTGTGAGATGGCATGGTGGG
TCGACTGAAAGCTGTCGCGGCGTTTTGTCCAAGAGTCCTAACTTATGTGG
TCGCAGTCCAGCCTCTAATCAAACCGGTGGAAGGTTGGAGCAGATTTTGG
GTTTGTCATGTATCCGTGCAGAAGCAATGGACTTAAGAATTGTTCTGAAG
CAATGGGGGCATATCTGTGAAAATCTCGTGTTTCAGATGCTGTTTTTGCT
CCTCTGTTTCGTGTCTATTTTTTCCTCATGCTTACAAACGATGAACTTTT
CAAACAAGGTCTATTTTTTCTTGCGCCGCGTGTTTTTTTCCAAGGATATA
CTGTGCTATTTAGACCCTTCTTTGTTGAAACAGAATCTTGCAAATAAATC
TTGGCATTTTGACCCAAGATTTGCTCTCAATAATCCTCCGCAAAGATTCG
AAGTATCACGATTCATGGGAAATAAATGTTGAATGCTCAAAAAGCGACGT
GTTGTGCCTCTCTTCTACTTGAAGTTGATAAAGGCGCAACGGCCACTTGA
TCCACAGACAATTCCACGGTGTGTCGAAAAGTGAGCATGACGCAGTCGTA
GAAGGGGCGTTCCTTCCCCAGCTGTATTACCTCAACACTACGGGTAGATT
CTAGCGGTGGGCACCAACCTGGGGCGCAACAAGAGGCGACATTTCCCGCC
ATGTCATGTCAAGCGGAGAAACAAAACTTTTCCATTGCTGTCCAACTGAC
AAAAAAGTACATCAACCCGAAGCCGATGACAATCGTGCACGTATCTCACT
GCGTAGTAGGCGTACCTAGGCCATACCTTCGGCACCGTCGTCTGCACTCA
CGGATCTGTGTAGAGTGCCAACGGCTTGGGTGTGGGGCGATTCGATCAAG
AGGTAGAAGCTCACAAATAACTGAGGTGTGTTGGCAGAGAGTTCCTCCTC
CTCCTTTTTTCTACTTCAAATTAGAGCACTTTTTGAATGGCATGAAGCAA
CAGTTCGTTTCACCAGCGATGCTTTTATTTCTGGATAGAAGCACCCCACA
ATCACCTCACTGGCGTCCGAGAGAGAACGGTTAGTGGAGGTTGCGGCATC
GAAGGTTTGGCCTCGATGCGTCAACTACGGGGTGAGTTATGTGAACGGGT
GGTGTACGCGATCATGTTGGAGATGTGTGCTCTCCGTTGAAGACGCACGC
ACACCACAAGCCATGACAGAAAAATTTCTTTTTCGCGCGCCTTGATCGTT
TTTCTTTGCTGTCGACGCCCGTGGCGTCGACTCACTAAGGACAGGGTGCG
TTAGAGGCCCTTGTGAATGAGCCACGTGCAGATTTCATAGCGTTGTGGAC
GATCAAGGTTGACTGACCTGTGCTAATCCCGCCGCACCCAGCAAGATTTG
TTAGCCCGCTCCAACATTTGTCAACACGCTCGACTTGACAAATCTTGGGT
CAAGATTTGTTCGAAAGGGCAGATTTTGGGCTTCGAAAAATCTTGGCCAA
GATATATCGGAAGATTTGTCTCCCATAAATCGTGAAACTGCCAGATCTTG
GCCAAGATCAAGATTTATCGACAAGATTTTGTTCCCACAAATATGGGTCT
TACTGTACAGCGTGAGTTGCCTCGGCTTTCCGCGCGCTGCATGTCTGATT
CCCCGTTGCATGACTCTCTGGTGCGTTGATTTTTTCTTCTTTGTTTTGAC
GTCTATTTGTTTGCCGGGTGTCCTTGTGTTTCCACGTGCCAGGTTTGTCT
GAAAGTCCGTGGTTCCAAATATTTTTCTGAAATGTTGTTTTTTGTCCCCC
CATCAACTTTTGTTTTGTCGTCTTAAATAAATTGTTGTCTGGTCTAATTG
TGTTTGTGCAGGGCGGGAAAGCGTACGTCTGCCACCAGACCAAGGACGAC
ATCTTCAAGTGCCGGGAGATCGCCAAGGTCAACGCCGCGGACCCCAACGC
TAACGCCGGCGACCCGTGCAGCCCCTGGAGAAACAGGCCTGTGCAGGTAC
GTAGGAAACCCTTACCTTTGAAGCATGTGAGAAAAGCACGAGCGCGCCTC
TCTTGATCCTTTTAAGCAAGTTGTTGTTGGTGTCGTTGTTGATGTCTTCA
CACTGTAATCCCTTCCGTTCTCTCTACCTCAACTACTCTAGTAATGTATT
CGTGAGGTGTGTGTATTTTTTTGTTTTGTTGTCAGTTATTGGGACCAATG
TCAAGGACGGTCTAAAATAGATGTCAGCACCGCGTCGGTTCGTGGGAGCA
AATAAAAATGCAGTGCGGTCGCTTCACTGTTCAGGGACGTGAGGCATCGT
GTTTGGGCGTGGGATGCGGACGCGAGGAAAAATCTGCGAAGGGTTTGGTG
GCGGGCACCAGGCCTGTGATACGCTCCACAAAGTGTGCGAAGTTCAAGCT
GAGCTTACTCGTCCTCCACCCTGGCCAAGGGTTCCGGGTGGACGCCGACC
GAACGTACGCCTTTGTCCACCCTAGAGACGTGTTCGCAAAAACCCCCTTT
TTCGGGGGACTTGTCGACCCTGCATCCACACCGCGCGGCGTGTTATGTGC
CGCTCTCTGTTTTGTGCTCTTCTGAGACACTCAGGAGCTGTGTGTTTTGT
GGTGGCCTGGTTGTTGTGCGCACGTACGACGTGGCTTTGTTTTACCGGAG
GCCCTGCAGATTGGAACAGGAACATTCGCTGGATAATTCCTCCTCCTGGG
AGTTTGTACAACAGTCTCTCTTGGTCAATTGGAAACCGCTGTCCCTGGAG
TTGGCGTATGGCCGTCTTGGTAGGGCCCATGCGGCCCTGCTTACGGCAAG
GAGATTGATTGGCCTGTAAAGTTTCAACAAAGCGTGGAAGAAAGAGCGAC
ATGTTGTATCACTGTCCCCGCGACCTGTGCGCAGTGAGTGACGCCACAGC
AACAGCACCCTCCAGGATGGTGTGCTTTGACTATTCCGGTAATGGTAGAA
ACGCCGAAATGGTTCATCGGACAGGAGATGGTGGTCTCGTGCCGGGTCGA
GAATAAGCCCACCTCGAAAAGGATTAGGCATACTGCTGTGCGTGTGAACT
CGGCCGCGAAGAACGTCTTCGCATGACGAAGACTTGCTGAGTTTCGTCAT
TGACGTGCGGTGGTCACGGAAGCTATGCCGCTTTTCCCCACAAAGATATC
CCATTCCACCTTGTTTCGGGAAAAAGTAGAGTGTGGAATGGGATAATTCT
GTGAGGGACGCGTCGGAGCCCCCGCGACCACCGAACGTCAAGGACGACGC
ACGGAGAGTCTCCATCATGCATCGTGCATCGTGCATCGAGCAGGAAGACA
CTGGCGGTCGCATGAGCGAGGTGGTTGATGCCTCTATGCGACATGCCTCT
TGTCGGCCAGATGCGTTTTCGACCTGACACAAGACCAGATGTATAAAAAT
ATATATTTCGTACCATTCCCGCTTCCCAAACCACTTTCACCGGTGCTGTC
CGGAACGTTGTTACTGACGCGGTCACTCACAGCGAGACTCCATAGTACTC
TTGTAACACGCTTGTTCACCTCGCTAAGACTCAATACGAAAGGTCAATCG
ATCTGCTTCTCGGGAGAAAAGGCCGCACGAGCCCTAAAACACTCGCATAC
CAACTCCAGGCACAGCGGCTCCCGTTTGACCTCAAAATACTGCTGTACAA
ACTCCGGGGAAGAAAGCCTACCCAGCGTATGTGTCTGTCCCAATCTGCAG
GGCCTCATGTAGCAGCTTTTTGGTGGTGGAGATGGAGGTGGACAAGCTAT
CCTATTCTATCACAACCCAGAGAGAGAGTCTGAGGGCAAGCTTGGGCGAC
CGTGGGGGCGATCATTACTTGATTGTTTGTGAAAGGAAGGAGTTACGGTC
CGGTTGACTCCCCCTCCCAAACCTTGATACGTACAGCTGGGGTCTCGGCA
AAATGATTTTTTTTTTTCTGTCTGTCCGTGTCATTTACGTTGTCCAATGT
GTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTATCGTTTTTAGGAAAGCT
TGGATCTGTTCGAGAAGATGCGGACGGGCCAGATGGACGAAGGGTCCGCG
ACGCTACGGCTGAAGATGGACATGACCTCGCCCAACCCCAACATGTGGGA
CCAGGTGGCCTACCGCGTGCGGTACATCCCGCACCCGCACGCCGGTGACA
AGTGGTGCGTCTACCCTACGTACGACTACACGCACTGCCTTGTGGACAGG
TGAGACAAAACACAGAAGGAATCTAGAGTGCCGGTTCCAGGGGGGGGGGG
AGTCACTCGCACATTGTTTTTATGCCACGAAAAATTGCCCTATCCGAAGT
GTAGGATTGTTTTTTGGTCCACCTACCGATAGCTGTGCGTACATTCTGCT
GCGTCGGGAAGGTTTTTATCCGTTTTCTTTGCGGACTGGCAAATAAAGAA
TGGCGTAACGTTGACTCTGAAAAAGAAAAATGACACAAGTACACCACGAA
GAGTTCAAATTGTGACAGGCGGTCAGGCTGCCGTGTTCTGATGGTGACAA
GCTCTTACCTTGCTCGTCTCTTCTTCTGAAAACTTGTGTGTACGTTCCAA
TACTCTTCAATAGCCTGGAAGACATCGACTACTCGATCTGCACACTGGAG
TTCGAGACACGACGAGAGTCGTACTACTGGCTGTTGGAGGCCCTTGACCT
GTACCGACCCAAAGTGTACGAGTTCGCGAGGCTCAACATCACCCGGACGG
TGAGCTCTTGCTGCTGTGTTCGCTGATCTACAAGCCAGAATATTTACCAG
TCGGCCGTGGCTCTGGTATGACAGGGTGGGGTGAGAAAGGCCCTCGACCC
TCTTGTATCGGAGCCCCCTCTTGTATCGGAAGAAGAGAGTACTCAACTAT
ACTACTTTTATAGAGGGTCGAGTGCGTGACAAACAATTTGGACCCTCTTA
TATCGGAGCCACGACTGTACTGCCTTGTGGCTCCTCACGCAAGAAACAGG
AGAAAACACACATACACACACCTGTACAAGTATCCATTTGTTGTCGGAAA
AAACATTTCAGCAACAGTTCCAAAAGTCAAAATTTGCCTGTGTTTTCACC
CTCGTCCCCCAACACTGACCAATCGCTCGACAGGTGCTGTCGAAGAGGAA
GCTCTTGAAGCTGGTCAAGGGTGGCAAGGTGAGGGGCTGGGACGACCCGC
GAATGCCGACGATCAAGGGGCTAAGAAGACGCGGCTACACGGCGGAGATC
CTGAACAGGTTCTGCGAGGATATCGGCGTGACCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8355:752..6387-

>mRNA_Ecto-sp13_S_contig8355.19717.1 ID=mRNA_Ecto-sp13_S_contig8355.19717.1|Name=mRNA_Ecto-sp13_S_contig8355.19717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8355:752..6387- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGATGGAAGCCAGTGGAGACCACGTACTCTTCGGACTCGTTCCAGCT
GCTGTATGACATGGCCATCAAGCTCATCAAGGGCGGGAAAGCGTACGTCT
GCCACCAGACCAAGGACGACATCTTCAAGTGCCGGGAGATCGCCAAGGTC
AACGCCGCGGACCCCAACGCTAACGCCGGCGACCCGTGCAGCCCCTGGAG
AAACAGGCCTGTGCAGGAAAGCTTGGATCTGTTCGAGAAGATGCGGACGG
GCCAGATGGACGAAGGGTCCGCGACGCTACGGCTGAAGATGGACATGACC
TCGCCCAACCCCAACATGTGGGACCAGGTGGCCTACCGCGTGCGGTACAT
CCCGCACCCGCACGCCGGTGACAAGTGGTGCGTCTACCCTACGTACGACT
ACACGCACTGCCTTGTGGACAGCCTGGAAGACATCGACTACTCGATCTGC
ACACTGGAGTTCGAGACACGACGAGAGTCGTACTACTGGCTGTTGGAGGC
CCTTGACCTGTACCGACCCAAAGTGTACGAGTTCGCGAGGCTCAACATCA
CCCGGACGGTGCTGTCGAAGAGGAAGCTCTTGAAGCTGGTCAAGGGTGGC
AAGGTGAGGGGCTGGGACGACCCGCGAATGCCGACGATCAAGGGGCTAAG
AAGACGCGGCTACACGGCGGAGATCCTGAACAGGTTCTGCGAGGATATCG
GCGTGACCAGG
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