mRNA_Ecto-sp13_S_contig835.19709.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: D7FGR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR9_ECTSI) HSP 1 Score: 766 bits (1977), Expect = 5.020e-273 Identity = 431/460 (93.70%), Postives = 435/460 (94.57%), Query Frame = 2
Query: 161 MAPGDAPDAERSGKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRAAEGSAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARASAK 1540
MAPGD PDAERS XXXXXXXXXXXXXXXXXXXXXXXXX LRRAAEGSAGPILVSFANQTVP DM AVEFRMHEADDEEREGQKIVMGD GRMDYWGLNFGPGAESNDLCRFLVGVED +TGEL LHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDG TATDGALAAVEEARRRFLPKMR EASTPEGVYSAGDIAG QEL+SMEREIDRAAEQIEGGMHQWAKDFAERPRESCP FVGKRL LLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGG A+YVRTKTLKNQLVVHALCLALVLEGCR+EIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARAS K
Sbjct: 1 MAPGDDPDAERSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSREVVLRRAAEGSAGPILVSFANQTVPGDMSAVEFRMHEADDEEREGQKIVMGDGGRMDYWGLNFGPGAESNDLCRFLVGVEDGATGELILHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGDPTATDGALAAVEEARRRFLPKMRTEASTPEGVYSAGDIAGVQELESMEREIDRAAEQIEGGMHQWAKDFAERPRESCPHFVGKRLTLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGTANYVRTKTLKNQLVVHALCLALVLEGCRLEIGVLAEDFRLSTAEARSMLRELGCTATNTSAHLKLPLTFPRSRKARASTK 460
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A7S2WKU6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WKU6_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.140e-25 Identity = 115/397 (28.97%), Postives = 170/397 (42.82%), Query Frame = 2
Query: 434 KIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLH---EAGHAYSLRQSVGDKDDN--IEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVG-GSAMSRVLGRALKEEEGGGAGGVDGASTATDGALA--AVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEG---------GMHQWAKDFAE-------RPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHA--SALLKGTPAQLSAKLDIPEIVLRRLLEKFSV-CEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIG---VLAEDFRLSTAEARSMLRELGC-----TATNTSAHLKLPLTFPRSR 1519
K V G+ Y N G + L +F +G+ D+ T L L E G Y+L Q V D D + + A G+ +RK LV FGS +KK A++S+ AN++ +VVG G M + + + +D A L A EARR+FLP ++A+ VY A +IAG D + R D + + G HQW K PR + R+ K + LL + FH+ L GT Q++ IP + R L F+V E++G G + TK LK++ +H L L L+ G M++G L +D +L EA +L + GC T S L +PLTFP+ +
Sbjct: 147 KTVNGEDRTCSYTASNGGRSNMDSRLTKFYIGIYDKETKSLVLQPSAEKGTVYALCQKVKDYDSSPLLASGATSGMTVAERKRFLVESFGSSRKKKAVKSQQANIVNISNVVGSGDVMMNAMEKQTNISQSNKK-AMDAARRGEQEDLVEIAYNEARRKFLPSFNEDATACFDVYDAREIAGGDAWDQLSRITDACVMKPKNHEFWLDSLMGRHQWVKSTKNVLNSVVGSPRSASNRYQIKTIQLL------------------NFLIAFHNKCFKLFLPGTEEQIAKSAGIPSTICSRFLTMFAVPSEERGREGFSI---TKQLKDKRTIHLLILYLLAHGKLMKVGSINTLCQDIKLEVTEAARLLVQAGCKCKKSTTGMISTSLTVPLTFPKPK 521
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A8H7PQX1_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PQX1_9FUNG) HSP 1 Score: 87.0 bits (214), Expect = 1.770e-14 Identity = 94/425 (22.12%), Postives = 203/425 (47.76%), Query Frame = 2
Query: 326 SAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLE--------YKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGA-LAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKL-DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC-----TATNTS----------AHLKLPLTFPRSRK 1522
++GP LV+F T P D + H + ++++ QKI+ G++ ++++ G N+G + S+ CR++V V D+ +TL EA ++ ++V A++G++ + + K+AL + FG+KK + I+S + N ++ S+ G +S ++ E +D A+ A + ++ +R +P A+ P +Y+ DI A+EL+++ ++I + ++ E+ + FV R++ +++ + ++++ L+Y+ ++ ++ +L +++ L + P ++ R+LE+++ GG RT + ++LV + + L L+ + LA D L + ++L+ +GC TA+ + A L P+TFP +RK
Sbjct: 25 ASGPTLVTFPG-TQPADDTLFDTYKHRSSGDDKKKQKIIAGETQKIEFVGKNYGADSTSDLPCRYMVAVYDKKDNTITLQEAP-VINMHRTVK---------ALKGIKSQVTAQNSFLEAKNALGDTFGTKKARQQIKSMERNEVKVESL-GQDVVST-----MQNE-------IDVAAQAVPTVDMIKEDQENQRPVPPYDAAATAPADIYNMDDIVSAEELNAVPIKDILKCTN---------LQELKEQLPFTLSEFVNTRVLSIINSKGKIDRKQVRVLVYISYLMAYYQMRPVLANKRDEINTILYNPPSAIVDRMLERYTT------GGR----RTPLMADKLVCYMMLLCLMANNYTVIPETLASDLSLKPTKTINLLKNVGCKVEMLTASQAAEFGIKGKVRRASLIAPVTFPVARK 406
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A0E9NJN0_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NJN0_SAICN) HSP 1 Score: 87.0 bits (214), Expect = 2.000e-14 Identity = 104/434 (23.96%), Postives = 187/434 (43.09%), Query Frame = 2
Query: 311 RAAEGSAGPILVSFANQTVPEDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARR-----RFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERP-----RESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIP-EIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC----------TATNTS---------AHLKLPLTFPRSRK 1522
R+ E + P + +F T P+++ ++ + ++ G + R+++ NFG G E LC + VG+ D+ST ++ + A H + R K+ + +D + +Y++ ++AL FG+KK K AI+S+DAN ++A S + V + + + A+T + E+ +R R +P E+ TP GVY + EL + + A + A D +R R+S +V RL +L + L+LLY + + + + + G LS KL P +I++ + +++ + GG A V T ++++ + + L L+ +++ +LA D L A + + R LGC A N S A LK P FP RK
Sbjct: 24 RSGEDARTPYIATFPGVTAPQNLTFDAYKRKKPKKSSEAKDVVLHGSTDRIEFDAQNFGHGEEG--LCDYYVGIYDKSTNKVEIVPAPHVHVTRTVKALKNISRDDKGRQ--QYREARNALGEAFGTKKAKQAIKSQDANKVEA------STLDNVADAIVSDVK---------AATKN---MPTKEDMKREQEEDRPIPTPNVESETPAGVYPLDTVISPAELSIINVKPFLAPD--------LATDKKKREGLLPYRQST--YVTDRLTKILSSNAEKKDTHRLKLLYYASLLMAFYVNHRVAGKKDILSTKLGSPPQILVDGFISRYT----EQPGGDARPVVTAKRLDKVLCYLFVVCLHLDNFSVDMNMLAADLSLKAARTQELFRTLGCKVMGCTETQRVALNISKAEARNYKRAVLKCPPEFPEVRK 421
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI000BA82FD4 (DNA-directed RNA polymerase I subunit RPA49-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA82FD4) HSP 1 Score: 83.6 bits (205), Expect = 2.770e-13 Identity = 107/433 (24.71%), Postives = 199/433 (45.96%), Query Frame = 2
Query: 317 AEGSAGPILVSFANQTVPEDMGA-VEFRMHEADDEEREG------QKIVMGDSGRMDYWGLNFGPGAESNDL---CRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKD--DNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGD--IAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAK---LDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC---------TATNTS-AHLKLPLTFP----RSRK 1522
++ S+G LV+F+N + ++ + F+ +E+ E REG +KI++ DSGR+ Y G NFG +E + L CR+ +G+ D++ G + ++ + +R S+ D + E+ + Y ++ D L + FGSK+K+ A+ SR + ++ G++ A +V+ KE V G T L E +P + A+ PE VY+ D + +E ++ E + A+ +++W K+ E +V L+ LG + R +L + + FH+ LLK + K +PE LL F++ + + G + +K++++ +A+ +AL+L+G ++ + D + +++ LGC T T T A L +PL P RSR+
Sbjct: 31 SDRSSGAYLVNFSNGKLKQNTKLNLHFKSYESS-ETREGLVLRRKRKIMVADSGRLQYVGYNFG--SELSHLGTACRYCIGLLDKNNGTMKVYST-QMFHMRPSLEDAGGFEETENPTEKSKSYTEKVDMLTSAFGSKRKRKAMESRVHHKVEEGNLE--LAADKVVENIDKE--------VSGIKTMKKNRL---ELEMPEAIPPQNRNATCPEEVYNVKDNKVISIEEYSGLDEEANLVADATLDQINEWKKE------EKYCHYV------LIHLGRLSCIRET-KLHQCKLLIYFHYLVTLLKLRYQDMKKKDPLPTVPEPYKHHLLNNFTL-KSENEHGTTFRSFPQRMKDKVIAYAMVVALLLDGFSVDFSDVHPDLKFPMNRLITIVLVLGCHVRSSKNPSTGTPTKIADLTIPLYTPGDKPRSRR 432
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A1S8VNV5_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VNV5_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 2.200e-12 Identity = 98/377 (25.99%), Postives = 173/377 (45.89%), Query Frame = 2
Query: 431 QKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASA-LLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTS-----------AHLKLPLTFPRSRK 1522
+++V+ ++ +M+Y G + SN C+++VG+ D+STGE++LH+A K + + + + + + L FG+KK+K AIR+ + N + VVG ++ + ++E A T + A A R +P +AS P VY D+A + LD++ +++ +A ++E + Q ++F +V +RL+L + E+ +K R L+YL + F+ A A L P L I + +L +FS ++ G+G V K LK++L+ + L L L L + +A D +S + S+ +ELGC A L LPLTF R+
Sbjct: 60 RRLVVAETAKMEY----IGEPSASN--CKYIVGILDKSTGEVSLHDASPLTMTTIVKSQKQGPSKTISDKNMLARNQ---LGEAFGTKKRKKAIRALEQNKVD---VVGLHDVASAITDKIQETS---------ALLPTKAVIDATMLADRD-IPPCNVDASMPSEVYKLSDVAPSVVLDAINVKQLWKA--RLEADIQQSIQEFR------MTNWVTERLMLTVQ--EQKEKSRAKMLIYLSMLIRFYGAKAGELNKNPTSLFGNFPI---IGEHVLSQFSEWQEDGSGKRRLCVSLK-LKDKLLAYILVLCLHLNNFTINTAQIAYDLSISIGKIVSICKELGCRIETVRPAGSGKSGEKHAVLSLPLTFSLRRR 400
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI001402797D (DNA-directed RNA polymerase I subunit RPA49 isoform X2 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402797D) HSP 1 Score: 80.1 bits (196), Expect = 3.300e-12 Identity = 93/382 (24.35%), Postives = 171/382 (44.76%), Query Frame = 2
Query: 341 LVSFANQTVPEDMGAVEFRMHE---ADDEEREGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRLVLLLDLGERNQKRRMLE---LLYLRHMCVFHHASALLKGTPAQLSAKL--DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELG 1459
LV F+N + VEF++H+ ++ ++ Q I+ + R+ Y G NFGP A + N LC++ VGV +E+TG++ +H A ++++ ED + Y+++ D+L+ FG+ K+K A+ SR N Q G+ A+++ + ++ G S + A + FLP +A PE VY DI + + I E ++ + AE S FV + L +++K R E L YL+ + H+ LK + L D+ ++V L++KF+V G + ++K ++V + + LAL + + ++ L +D ++S + R +G
Sbjct: 23 LVQFSNGKLTNSEN-VEFQLHKNIHKNNPRKKNQLILSAATDRLTYVGNNFGPSALKCNSLCKYFVGVLNENTGKMEVHNA-QLFNMQPFFPGDSVTKEDTNEKEASYREKVDSLIEAFGTIKQKHALNSRRLN--QVGNETLQEAVTKAAENIIDKK---------GISALANEATQFESQFESAFLPPCHADADKPEDVYKFEDIISTADYQA----IKPCCEPLKINTAEDILKLAETGNYST--FV----LESLKSAPQDEKSRDHEINCLFYLQILIKLHN----LKKHEFKHKGSLGSDVADVVKNSLMKKFTVLTYNN--GRVQNIIPISMKAKIVAYVIALALHINNFQTDLTYLQQDLKISENRILDVARAMG 375
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: UPI0019559963 (DNA-directed RNA polymerase I subunit RPA49 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019559963) HSP 1 Score: 79.3 bits (194), Expect = 5.660e-12 Identity = 97/362 (26.80%), Postives = 163/362 (45.03%), Query Frame = 2
Query: 422 REGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDK--DDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVI------QAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWA---KDFAERPRESCPRFVGKRLVLLL--DLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLDIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCT 1465
++ ++IV+ +S R+ Y G NFGPG+ +SN+LCR+ VGV D+ST ++ +H A L G+ DDN + Y+Q+ DAL+ FG+ K+K A+ SR N + QA ++ + + R AL+ E V+ + T+ L FLP A PE VY + E D+++ E GM A +D + E P+ V L L D Q R L +L + + + GT + P+I++ ++++ F+V E G + + V T +++ +LV H L L L + + +L D +S + + + +G T
Sbjct: 48 KKNRRIVVAESDRLPYVGSNFGPGSSQSNNLCRYFVGVLDKSTMQMKVHNAQLFNMLPLIPGESTGDDNTK----HPETYRQKVDALIEAFGTTKQKRALSSRRLNEVGNEMLQQAVALAASNVIDRKGMDALRNE-------VNESEAKTETPL---------FLPLCNTAAEKPEDVYPFDQLLSPIEFDALK----------EVGMKMAALTPEDLQKMRDELGPQTVLAHLESLPTEDAARDRQSRCAWYLSFLIKVSQQKRSVSFKFGT------ENGCPKILINKVMKNFTV-ESFHDGRLRNTVST-SMRLKLVSHCLALLLHMGDQTANLTLLHRDMDISDNKMLELAKAMGLT 371
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A0L0HSG0_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HSG0_SPIPD) HSP 1 Score: 78.6 bits (192), Expect = 9.410e-12 Identity = 94/357 (26.33%), Postives = 171/357 (47.90%), Query Frame = 2
Query: 422 REGQKIVMGDSGRMDYWGLNFGPGAESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGD-KDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVIQAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARR-----RFLPKMRKEASTPEGVYSAGDIAGAQELDSME-REIDRAAEQIEGGMHQWAKDFAERPRESCPR-FVGKRLVLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKL--DIPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGC 1462
R+ ++IV+G + +++Y G N G + CR+++GV D++T +LTL E+ A+ + +V K + A + + ++AL FG+KK++ AIR+ + NV+ V G + + V+ A+ E+ A+T L + EE R+ R +P +A +P VY+ DI EL ++ ++I RA A D E P +V ++ + L + ++ RM L+YL ++ FH K +Q K P+IV RL+ +F+ E + G Y + L+++L + L L L+L +++ +A D ++ + + +ELGC
Sbjct: 58 RKKRRIVVGQTSKLEYVGDNAG----NKRYCRYVIGVFDKNTKQLTLRESD-AFRMATTVKTLKRHESKHIAEKNM---LARNALGEAFGTKKRRQAIRALEKNVVD---VRGMAEVEDVIKGAIDEK----------AAT-----LPSREEIRQEAQLDRCIPPYNLQAQSPADVYNVEDIITPAELQAIPFKQIWRARS---------ASDVKELLEPISPTSWVWDKIHVCLQV--KDDSVRMRRLIYLAYLMKFHGFKD--KDLNSQAVGKRLGGAPQIVAERLMNEFT--EFQEDEGRRRYRMSPKLQDKLRAYILTLCLILNDFKVDASQIARDLGIAVNKMNDIAKELGC 373
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Match: A0A2R8Q7A0_DANRE (Polymerase (RNA) I polypeptide E n=2 Tax=Danio rerio TaxID=7955 RepID=A0A2R8Q7A0_DANRE) HSP 1 Score: 78.2 bits (191), Expect = 1.350e-11 Identity = 92/402 (22.89%), Postives = 177/402 (44.03%), Query Frame = 2
Query: 320 EGSAGPILVSFANQTVP--EDMGAVEFRMHEADDEEREGQKIVMGDSGRMDYWGLNFGPGA-ESNDLCRFLVGVEDESTGELTLHEAGHAYSLRQSVGDKDDNIEDFAMEGLEYKQRKDALVNQFGSKKKKAAIRSRDANVI------QAGSVVGGSAMSRVLGRALKEEEGGGAGGVDGASTATDGALAAVEEARRRFLPKMRKEASTPEGVYSAGDIAGAQELDSMEREIDRAAEQIEGGMHQWAKDFAERPRESCPRFVGKRL-VLLLDLGERNQKRRMLELLYLRHMCVFHHASALLKGTPAQLSAKLD----IPEIVLRRLLEKFSVCEKKGAGGMASYVRTKTLKNQLVVHALCLALVLEGCRMEIGVLAEDFRLSTAEARSMLRELGCTATNTSA 1483
E +V F+N V E++ F+ A + ++ ++IV+ DS R+ Y G NFG G+ +SN++C++ VGV D+ T ++ +H A L G+ + + + ++ + DAL+ FG+ K+K A+ SR N + QA + + + + AL+ E V +D AL FLP A E VY + E +S+ +E+ + ++D + CP+ V K L L D +R+++ R C ++ + + ++S K P I++ ++L+ F+V E G + + V + +++ ++ + L L L + G + +L D +S + + + +G T + +A
Sbjct: 12 ETEQNTFIVKFSNGNVKNAEELDFTVFKHSNASNPRKKNRRIVVADSDRLPYVGSNFGSGSLQSNNMCKYFVGVLDKQTMQMKVHSAQLFNMLPVIPGEATEAESE--NQPSTFRDKVDALIEAFGTNKQKRALSSRRLNAVGNETLHQAVAQAASNIIDQKGVEALRNE-------VIETEAQSDAAL---------FLPPCNANADKLEDVYPFDQLLTPNEFESL-KEVGAKYATLS------SEDLQKMRDNHCPQTVLKHLETLSKDEADRDRQCR----------CAWYLSFVIRASLQKRISFKFGSDDGCPRIIINKVLKNFTV-ESFHNGSLRNTV-SMSMRMKMASYCLALLLHMGGQTANLTLLHRDMSISENKMLEVAKAMGLTLSRQNA 376 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig835.19709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig835.19709.1 >prot_Ecto-sp13_S_contig835.19709.1 ID=prot_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=468bp MGRKRASMAPGDAPDAERSGKKSKKRRREEGLPAGGVVAAGAGGGKRVSSback to top mRNA from alignment at Ecto-sp13_S_contig835:1134..9281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig835.19709.1 ID=mRNA_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8148bp|location=Sequence derived from alignment at Ecto-sp13_S_contig835:1134..9281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig835:1134..9281+ >mRNA_Ecto-sp13_S_contig835.19709.1 ID=mRNA_Ecto-sp13_S_contig835.19709.1|Name=mRNA_Ecto-sp13_S_contig835.19709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1404bp|location=Sequence derived from alignment at Ecto-sp13_S_contig835:1134..9281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |