mRNA_Ecto-sp13_S_contig8255.19604.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8255.19604.1
Unique NamemRNA_Ecto-sp13_S_contig8255.19604.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: D7FY19_ECTSI (Sorting and Assembly Machinery 35kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY19_ECTSI)

HSP 1 Score: 646 bits (1667), Expect = 5.950e-232
Identity = 325/356 (91.29%), Postives = 327/356 (91.85%), Query Frame = 1 
Query:   67 MGSEEHGDAVPVRTSWNPLRALRSWGRIEEQPDLEQPGPVIAHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAALLDLLPAFDNLSRLFRRVCDDYFRPGSFPPPSSGGEGVGEGKNSGEERSGDGLGGSGGSEDRLRDAMLRADYVNSLNAFNQLAGCALCSEVPYIEDPYPPRPIANAGIPPP 1134
            M SEEHGDAVPVRTSWNPLRALRSWGRIEEQPDLEQPGPVI HGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYP LTDGQFVLRSEDAAGHIASRR DVDVGLTEAEK EAQALAMLVREGL PLLRVMRY GDEGEVRQTVHPPMKKALSWPLSWWSP AEGRRSKRESAVRGLDRLSKAELI RAK MYAALDLRLGNSKEAFFFGSRPTS+DAVVFGHLAEAWTIA LLDLLPAFDNLSRLFR VCD+YFRPGSFPPPSSGGEGV E K S             GSEDRLRDAMLRADYVNS NAFNQLAGCALCSEVPYIEDPYPPRPIANAGIPPP
Sbjct:    1 MASEEHGDAVPVRTSWNPLRALRSWGRIEEQPDLEQPGPVITHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPALTDGQFVLRSEDAAGHIASRRSDVDVGLTEAEKVEAQALAMLVREGLQPLLRVMRYMGDEGEVRQTVHPPMKKALSWPLSWWSPAAEGRRSKRESAVRGLDRLSKAELIGRAKEMYAALDLRLGNSKEAFFFGSRPTSVDAVVFGHLAEAWTIAVLLDLLPAFDNLSRLFRHVCDNYFRPGSFPPPSSGGEGVAESKKS-------------GSEDRLRDAMLRADYVNSHNAFNQLAGCALCSEVPYIEDPYPPRPIANAGIPPP 343
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: W7TNF1_9STRA (Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF1_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.460e-48
Identity = 121/325 (37.23%), Postives = 165/325 (50.77%), Query Frame = 1 
Query:  172 QPGPVIAHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASR--RRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGL--DRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAALLDLLPAFDNLSRLFRRVCDDYFRPGSFPPPSSGGEGVGEGKNSG---EERSGDGLGGSGGSEDRLRDAMLRADYVNSLNAFNQLAGCALCSEVPYIEDPYPPRPIANAGI 1125
            +P P+ AH       V+ QFRPA+ +Q +LRFVR PY V N  Y      G  PVL DGQF+L  EDA G++       D+D  L+ A +A+  AL  LVRE L P +   RYR DE    Q V   + +A  +PL      AE RR  +E   RGL    +   E+++RA+ +Y  LD  LG S   FFFG  PTS DA +FGHLAEA     +L L+  FDNL R F R+ +D+F  G+    S          + G    E  G  +         L++    ADY+N+ N FNQ+    LC+E P + +P   + +   G+
Sbjct:   61 EPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYR-DERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGAQAAASXXXXXXXLSASLGGPVREPQGFSIASD------LKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGL 378
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: A0A1V9ZT46_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZT46_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.470e-27
Identity = 68/197 (34.52%), Postives = 111/197 (56.35%), Query Frame = 1 
Query:  226 QFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAALLDLL 816
            QF PAW++QA++RF  +P  ++N+ Y    ATG  P L DG ++L  +D   H+ +  +D+D  LT+A+K E+ A   +V+E L  +L   R+  D    ++   P + + L +PLS   P         + A  G +  ++ ++   A+  Y+AL+ RL  S   +FFGS P++LDAVVFGHL +A +   L D++
Sbjct:   56 QFLPAWDVQAYVRFAEIPLHIKNAKYPSFEATGELPQLRDGHYLLGKDDIIMHLQTYHKDIDASLTDAQKGESLAFKAMVQEKLHRVLLYCRWV-DPITYKEVTRPAITRVLPFPLSRILPKQMHSSMAAKLAAAGYE--TQEQVYIAARDCYSALNARLEASAGPYFFGSSPSALDAVVFGHLVDALSDVQLRDVV 249
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: A0A1V9ZH69_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZH69_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.630e-26
Identity = 71/220 (32.27%), Postives = 120/220 (54.55%), Query Frame = 1 
Query:  217 VVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEA-FFFGSRPTSLDAVVFGHLAEAWTIAALLDLLPAFDN-LSRLFRRVCDDYF 870
            V+ QF PAW++QA+LRF ++   ++N+ Y    ATG  P L DG ++L  +D   H+ +  +D+D+ L + +K E+ A   +V+E L  +L   R+  D    ++   P +++ L +PLS   P           A  G +  ++ ++   A+  Y+AL+ RL + K+  +F+GS PTSLDA+VFGHL +A +   L D++    + L      + D YF
Sbjct:   51 VLLQFMPAWDVQAYLRFAKIGMHIKNAKYPSFEATGELPQLNDGHYLLGKDDIIMHLQTYHKDIDMELNDVQKGESLAFKSMVQEKLHRVLLYCRWV-DPITYKEVTRPAVQRVLPFPLSRILPKQMHVSITNMLAANGYE--TQEQVYITARDCYSALNARLESVKDGPYFYGSTPTSLDALVFGHLVDALSDVQLRDVVHIHGSRLITFAEHIRDTYF 267
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: A0A067D0U6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0U6_SAPPC)

HSP 1 Score: 115 bits (288), Expect = 3.320e-25
Identity = 67/197 (34.01%), Postives = 110/197 (55.84%), Query Frame = 1 
Query:  226 QFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAALLDLL 816
            QF PA+++QA++RF ++P  ++N+ Y    ATG  P L DG ++L  +D   H+ +   D+D  L+  +K E+ A   +V+E L  +L   R+  D    ++   P +++ L +PL+   P         E A  G    S+ ++   A+  YAAL+ RLG+    FF+G+ PTSLDA+VFGHL +A +   L D++
Sbjct:   56 QFLPAYDVQAYVRFAKIPLHIKNAKYPSFEATGELPQLRDGHYLLAKDDIIMHLQTYHTDIDGHLSAVQKGESLAFKSMVQEKLQRVLHYCRWV-DPITYKEVTRPAVQRVLPFPLNRVLPKKMHHAMTSELATAGY--ASQEQVYVAARDCYAALNARLGDGP--FFYGAAPTSLDAIVFGHLVDALSDVQLRDVV 247
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: A0A6G0XBB6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBB6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.300e-21
Identity = 66/188 (35.11%), Postives = 104/188 (55.32%), Query Frame = 1 
Query:  226 QFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGLDRL-SKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEA 786
            QF PAW++QA++RF ++   V N+ Y    ATG  P L DG F++  +D   H+ +  +D+D  L+ +++A++ A   LV+E L  +L   R+  D    ++   P + + + +PL+   P     R    +A+  L+   SK      A+  Y AL+ RL  S   FFFG RPTSLDA+VFGH+ +A
Sbjct:   59 QFFPAWDVQAYIRFAQIKLHVVNAQYPEYEATGELPQLNDGHFLVPKDDIILHLQTYYQDLDAQLSASQRADSVAFRSLVQEKLQRVLLYCRWV-DPITYKEVTRPAVLQVMPFPLNRILPKLIHTRY--SNAL--LETFPSKEHTYLTARDSYVALNARLEASSGPFFFGDRPTSLDAIVFGHVVDA 241
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: W4GWX1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWX1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 8.620e-19
Identity = 63/198 (31.82%), Postives = 105/198 (53.03%), Query Frame = 1 
Query:  226 QFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGA-EGRRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAALLDLL 816
            QF PAW++QA+ RF  +   + NS Y     TG  P L DG F++ + D   H+ +  +D+D  LT+ ++AE+ A   LV+E L  +L   ++  D     +   P +++ + +PL+   P     R +    A   L  LSK  +   A+  Y AL+  L  S   +FFG+ P+++DAVVFGH+ +A +   L +++
Sbjct:   61 QFFPAWDVQAYARFAEIKLHMVNSQYPEYETTGALPQLNDGHFLVPAGDIILHLQTYYKDLDAPLTDKQRAESIAFRALVQEKLARVLDYCQWV-DPITYSEVTRPAVQRVMPFPLNRVVPKLLHVRHTAAFHASTSL--LSKEHVYLTARDSYVALNSFLEASDGPYFFGTNPSAVDAVVFGHVVDALSDCQLREVV 255
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: UPI000A0EE420 (metaxin-1 isoform X1 n=3 Tax=Athalia rosae TaxID=37344 RepID=UPI000A0EE420)

HSP 1 Score: 87.0 bits (214), Expect = 2.320e-15
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 1 
Query:  253 AHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRS-EDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKR--ESAVRGLDRLSKAE--LISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTI----AALLDLLPAFDNLSRLFRRVCDDYF 870
            A+ +F  +P ++  +S       G+ PVL  G  ++ S +D    +  R    D  LT  + AE  A   +V+E + P L+ + +  D G   + + P   KAL +PL+++ PG   R++K   ES     D +S  E  + S A+     L  RLG S   FFFGS PTSLDA+++ +LA    I    +AL + L A  NL +   R+   YF
Sbjct:   28 AYAKFSGVPLKINPTSNPFRTPNGVLPVLRCGNEIIDSVKDIKAFLRQRNYTADCKLTPKQCAEVVAYDTMVKEKIYPALQYIWWV-DVGNYNEFIRPWYAKALPFPLNFYYPGKYERQAKAMMESLYPTEDEISVIENGVYSEAQKCMTLLSTRLGESD--FFFGSHPTSLDAIIYSYLAPLLKIPLPNSALQNHLKACTNLVKFVTRISQRYF 239
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: UPI001CF3AC10 (metaxin-1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF3AC10)

HSP 1 Score: 84.3 bits (207), Expect = 1.660e-14
Identity = 68/222 (30.63%), Postives = 100/222 (45.05%), Query Frame = 1 
Query:  244 EIQAHLRFVRLPYRVENSSYMGSAATGLYPVLTDGQFVLRSEDAA-GHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRESAVRGL------DRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTIAA----LLDLLPAFDNLSRLFRRVCDDYFRP 876
            E+ A+ +F   P  V  ++    +  G +PVL  G  +L + D    +   +  + D  L   ++A+  AL  LVR  L P +    +  DE    +   P   K L +PL+++ PG   R+ KR     G+      D   + +L   A      L + LG+    FFF  RPT+LDAVVF HLA  +        L + L  +DNLS   RRV   YF P
Sbjct:   26 EVLAYAKFAGCPINVNRNNNPWKSPLGEFPVLRSGGDILTAPDKIMDYFRLKNFNADYQLNAKQQADTLALVSLVRSKLYPAIS-FTFWVDERNYTKFTRPWFSKRLPFPLNYFLPGKMSRQ-KRSEICEGVYSHEIDDLQLENKLFKEALECLKLLSIVLGDKD--FFFSHRPTTLDAVVFSHLAVIYKAPLPNNKLHNYLQGYDNLSTFCRRVLQRYFSP 243
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BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Match: UPI000626D060 (metaxin-1 isoform X1 n=5 Tax=Orussus abietinus TaxID=222816 RepID=UPI000626D060)

HSP 1 Score: 82.4 bits (202), Expect = 6.410e-14
Identity = 67/216 (31.02%), Postives = 106/216 (49.07%), Query Frame = 1 
Query:  247 IQAHLRFVRLPYRVENSSYMGSAATGLYPVLT-DGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQALAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEGRRSKRE-SAVRGLDRLS--KAELISRAKGMYAALDLRLGNSKEAFFFGSRPTSLDAVVFGHLAEAWTI----AALLDLLPAFDNLSRLFRRVCDDYF 870
            + A+ +F   P  V  +S    A  G  PVL  D Q +   +D    + +R    D GL   + AE  A   ++++ L P L+ + +  D+    + + P   KA+ +PLS + PG   R++K    A+  L+ +S  + E+ S A+     L  RLG S   +FFGS PTSLDA+++ +LA         AAL + L A  NL++   R+   YF
Sbjct:   25 VLAYAKFSEAPLEVMATSNPFRAPKGQLPVLRCDAQTLATPKDITAFLNARNYTTDFGLNSKQCAEVLAYDTMLKDKLYPALQFIWWV-DQKNCTEIIRPWYGKAIPFPLSLYYPGKFERQAKAMVEALYPLEDISGIENEVYSEAQKCLTLLSTRLGESH--YFFGSAPTSLDAIIYSYLAPLLQAPVPNAALQNHLKACGNLTQFVTRITQKYF 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8255.19604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY19_ECTSI5.950e-23291.29Sorting and Assembly Machinery 35kDa protein n=2 T... [more]
W7TNF1_9STRA3.460e-4837.23Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A1V9ZT46_9STRA3.470e-2734.52Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9ZH69_9STRA6.630e-2632.27Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067D0U6_SAPPC3.320e-2534.01Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0XBB6_9STRA2.300e-2135.11Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GWX1_9STRA8.620e-1931.82Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
UPI000A0EE4202.320e-1532.09metaxin-1 isoform X1 n=3 Tax=Athalia rosae TaxID=3... [more]
UPI001CF3AC101.660e-1430.63metaxin-1-like n=2 Tax=Acropora TaxID=6127 RepID=U... [more]
UPI000626D0606.410e-1431.02metaxin-1 isoform X1 n=5 Tax=Orussus abietinus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8255contigEcto-sp13_S_contig8255:368..6702 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score647.9
Seed ortholog evalue3e-183
Seed eggNOG ortholog2880.D7FY19
Preferred nameMTX2
Model size1156
KEGG koko:K03351,ko:K17776
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0098588,GO:0098805
Exons8
EggNOG free text desc.Metaxin 2
EggNOG OGsKOG3027@1,KOG3027@2759
Ec32 ortholog descriptionSorting and Assembly Machinery 35kDa protein
Ec32 orthologEc-08_004730.1
Cds size1155
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8255.19604.1prot_Ecto-sp13_S_contig8255.19604.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8255 368..6702 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464095.2805135-CDS-Ecto-sp13_S_contig8255:367..4721681464095.2805135-CDS-Ecto-sp13_S_contig8255:367..472Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 368..472 -
1681464095.2909572-CDS-Ecto-sp13_S_contig8255:916..11271681464095.2909572-CDS-Ecto-sp13_S_contig8255:916..1127Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 917..1127 -
1681464095.2994242-CDS-Ecto-sp13_S_contig8255:1810..19981681464095.2994242-CDS-Ecto-sp13_S_contig8255:1810..1998Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 1811..1998 -
1681464095.30851-CDS-Ecto-sp13_S_contig8255:3390..35071681464095.30851-CDS-Ecto-sp13_S_contig8255:3390..3507Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 3391..3507 -
1681464095.3285813-CDS-Ecto-sp13_S_contig8255:4157..42561681464095.3285813-CDS-Ecto-sp13_S_contig8255:4157..4256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 4158..4256 -
1681464095.3443701-CDS-Ecto-sp13_S_contig8255:4969..51201681464095.3443701-CDS-Ecto-sp13_S_contig8255:4969..5120Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 4970..5120 -
1681464095.355362-CDS-Ecto-sp13_S_contig8255:5683..57901681464095.355362-CDS-Ecto-sp13_S_contig8255:5683..5790Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 5684..5790 -
1681464095.3674886-CDS-Ecto-sp13_S_contig8255:6525..67021681464095.3674886-CDS-Ecto-sp13_S_contig8255:6525..6702Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8255 6526..6702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8255.19604.1

>prot_Ecto-sp13_S_contig8255.19604.1 ID=prot_Ecto-sp13_S_contig8255.19604.1|Name=mRNA_Ecto-sp13_S_contig8255.19604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=385bp
GSNGDSSQQSIRRTPKINPTRVMGSEEHGDAVPVRTSWNPLRALRSWGRI
EEQPDLEQPGPVIAHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSS
YMGSAATGLYPVLTDGQFVLRSEDAAGHIASRRRDVDVGLTEAEKAEAQA
LAMLVREGLMPLLRVMRYRGDEGEVRQTVHPPMKKALSWPLSWWSPGAEG
RRSKRESAVRGLDRLSKAELISRAKGMYAALDLRLGNSKEAFFFGSRPTS
LDAVVFGHLAEAWTIAALLDLLPAFDNLSRLFRRVCDDYFRPGSFPPPSS
GGEGVGEGKNSGEERSGDGLGGSGGSEDRLRDAMLRADYVNSLNAFNQLA
GCALCSEVPYIEDPYPPRPIANAGIPPPGEPVNR*
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mRNA from alignment at Ecto-sp13_S_contig8255:368..6702-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8255.19604.1 ID=mRNA_Ecto-sp13_S_contig8255.19604.1|Name=mRNA_Ecto-sp13_S_contig8255.19604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6335bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8255:368..6702- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGAGCAACGGGGACAGCAGTCAGCAGTCCATCCGACGTACGCCGAAAAT
CAACCCTACGCGGGTGATGGGGTCTGAAGAACACGGTGACGCTGTCCCGG
TTAGGACATCGTGGAACCCCCTGCGTGCCTTACGTTCGTGGGGGAGGATT
GAAGAGCAACCAGACTTGGAACAGCCTGTGAGACGATTTCTTTCTTGTAT
AGGGTGTGTACACGCCTTTCCAAACAGGGCAGGCATCGGTAGACTGCTGT
GTAGTGGTACCAATTCACCGATGCACTGCATTTGTGAAGTGTGCATGTGG
AGTGCACATCTTGCCTCGTGTTCTTTCTAGTAGGTACATGTATACTTATG
CGCACACAGTACGATAGACTCGCATGCTATGGGTGTGCAGGCAAGGCACG
CTGGGGCGTCGAATACCCACACCATTTTGTTACTCGGTGATCATGAAAAC
GACCGCAGAACACCTACAGCAGTAGTGCCTACAGTACCGCAAACGGCGGT
GCCGACCTTCGCATAGCAAGAACGCCAGATTAGATGGCGTTGCGGGGGCG
GTCACCAAGAAATAATTAAGCTTCATGCGAAGAATGACAGATCGATCAGG
AGCACCAAAGTTGACCAATAGGCTTGGACAGCTGAGGTTACAGCAGCAGT
GCGGCAAGCCCCTTTGATCGGGCTTAAGAAACAGCAAACACAACCCAACG
TCTCTCATCGCCCTCGAAATGGAAAGCGGATTCACTTGAGCGGTGATGTG
CACAAAATCATTGGTTTTGGCCCATCGCGCATAACAACATGGAGAGATCG
GGATTCTTTACATTGGTATGTAGCGTGGATACCAACATGTCGCTACTTTC
CGCCAGACCTGGCCCAATCCTCTCGTTGCCCCCCTGCTCGACCGTGGTTG
TCGATGTCGCAGGGGCCCGTGATCGCTCATGGGAGTGCTTTGGACGTGAT
GGTGGTGACACAGTTTCGCCCCGCTTGGGAGATTCAAGCACACCTCCGCT
TCGTCCGCTTGCCCTACAGGTGGACAGACCAACACCAGTGGGGCTTGTTC
GATTGAATTCGCCGGAGAAAGGGTTGGTGGCATTGGAGGCCGTATGGTTG
GGTTTTATGGTCGAATTTAGTTCTTTGCTTTTGTGGCTTGTGCTGATGTA
GCCACGGTGGAGTTGGTGGGAGTGATGCATCGTTGGGCTCGTTCCATTCC
TCGTTTGCCGGTGCCGTCAGTATTTTGGTTGGTGTGGTGGTGGTGATGGA
TGTTGATGTTTGTTTCGTGACCACTCTCTGGTGGATGGTAATGGTCGGTT
TTCGCTTCTTGGTCGCGCTCTCGACAGGCGATAGTCGAGACACCAAACAC
ACGGGGCATTTCCAGTATTGGGCTGTTTACCTGAGTTTACCTACTGATGC
CTGCTTGATCTGTCAATGCACACACACCCTAATTCAAACGCTCTTGACAC
TCCCTTCAAAGTCAGAGATATTGCACTTCACAAAACTTGCGAAGCTCTTT
GCCGAGTGAGTCTACACAGCGTGCCCCACAACGATACCTTCGTCTACATC
CCCCCGCACACCCGTTTACCCGTGGCACTCAGAGTCGAGAACAGCAGCTA
CATGGGGTCGGCGGCGACGGGCCTTTACCCGGTCCTCACGGACGGCCAGT
TCGTCCTCCGCTCCGAGGACGCGGCCGGCCACATCGCCAGCAGGCGCAGG
GACGTGGACGTCGGCCTCACGGAAGCGGAGAAGGTTTGGTTTTCGCGGTG
CTCGCTTGCGTGTTTGGCGTGGTCTTCGTTCGTCGCTTCTTATCAATCGT
ACGTGCGGTCGCCCAGACGTTACACTAAGCGCGGCGGAGTGGGTGTAGAA
GGAGGTGTAGGTGGTGAGGTAGGTCTGTGTGAGCGGTGCTCGCTTGAGTG
GCTGGCGTTATGTCGCCCAAGACATAAAGCGCTCGCACTCCGCCGCGTTG
TGGAAGTGGAGAGGTGTTGGTGAGTTAATATGTCTCCACTTGTGCCGTAA
TGGGTGACAGAAACGCCACCGGTGAGCATCTACGAGCACATGCAGTATCG
CATTCAAGTTGGACTGTTTTGTACTTCTCTCCGCCGGTGCCAGGGCAGCC
TTGGGCGTATGAAAGTGGCGTATGAAAGTGGCGTAAAAAAGTGTACAGGT
ACAGAGTACCGGCACCGACCTCAAGCTTCCCCCTCCGCCCCTCGATCCTG
TAGAAACCACGCACATTTCCATGAAGTGTGCCTCGTTCTGTATGCGTAAC
GACAGCCCTCCTGGCACGTATGCGTCCTTATTGCTTAGTCTGCCGGTTTT
CGGTATGATTGGCCTCGGGGATGACCAACACCAGACTTCACATCTAGCCG
CTCCACAAGCGGCGATACCGATACATTATCGTCTGATGTTCAGTCAGCGT
TTGTATACCTAGCATGGTTCCCTCGTGCGCATATTCCACGTCCCAGGCGG
AGGCGCAGGCGTTAGCCATGCTGGTGAGGGAGGGGCTCATGCCGCTCCTT
CGGGTGATGCGCTACAGGGGGGACGAGGGCGAAGTCCGGCAAACGGTACG
TAGGTGGGGTCAGAACTGGTCTGGGCGGGGTTGGGCCATCCGAGACTGTC
GGGATATGTGGACCATGATGAATCCTGGGGTGATGATCGGTAGATGCTGT
ATGCGGCGGCAGCTGCTTGCGTTCGAATCTTGGCCCCGAACGCTTTCCAG
GCGGTCACCAAATGGAAACCGCATGGGTAGGAGGAGTTTACAAGGCCCGG
GCGTACAACTGCCTCTGCTTGCTGTGTGTCCTAGGGTTACCCACCCCACC
CCATGTTCTTTTGGACATTTTTGCCACCCCGCGGTTCTTTTCTTCTTCCG
CGCGCAGAAGCATGGCCATGAATGCCTTCCTTGCGAGAACCCGATGCCTC
TTCCCGAGCAATTCTCCCCGCTTTTTGTTTGGCCGGTCAAACGGTTTGCC
ATGGCAACACGCACTCACTACCCTCCATCCTATCTCGGCGTAGCGGTGCA
GGTTTTCATCCTCCCGCCGTCTCACACTCCTTGCCCTTCCCCCTATATCA
GCGTTGACGGTGCAAGTTTTTCGTCCTTTGGTCGTGTCGCACTCACTGCC
CTCCTCCCACCTCAGGAGCAGGTTTTCACCATCCGGTTTTCTCACACTCA
CTCCCTTCCCCCCTCTCAACTTCGTCGACTTCGTTGGTCGTGCAGGTCCA
TCCCCCGATGAAGAAGGCGTTGTCCTGGCCGCTGTCGTGGTGGTCGCCTG
GCGCGGAGGGCAGGCGGAGCAAGCGGGAGTCTGCGGTTCGCGGCCTCGAC
CGGCTGAGCAAGGTGCCCGGAGTGTGCTACACATTGTGTGTGTGAGTTTA
TTACTAGCGTCGACCATTCCAACTAGTTACTAGTTGTCACCAATGGGAAG
CGCTAAACGGCTGACCAATGAAAAGACGTCAGTCTTAGTGCGGTTGAAAA
CACAGAAGACTTCTATCTACCATGAACTGGGACGCCGTGAGGGAGGGGGC
AGCATGGGGGAGGCTAAACTATCCTTCGGATCAAAAACAGAAGCAGCAGC
AACAGAAGAAAACTGCACGCGTCTACCAAGTCTTTTACCTAGTACTCGAG
TTCGTTTAGGAGTACTTTCACCAGTATCCTTGTTTTCGCTACCATCATTC
TGATCCTCATTTTGACAAGAAGAATCTCTGGGCAGTTCTTCCCTAGCCCT
ACGTTTCGTGTTGTGGGGAAGGTCATCTGGCTCAAACCCTTTGCTCTCTT
CCACTCCTCCATGTTTTCCTGCTCCATCGTCGTCTTCGCCCTCCTTTCTC
CCCTTTCCCTTCCCTTCGTCTTCGGCACTCCCAAAAGAATTACCCTCACT
ACTATCGTCGTCGCAGAGATCCCAACCGATTGGCCATGATGGAAGTTGGC
CGATCAGTAGCCCATGACGTTTTAACACATCGCGAGTTCGCATCGACAGA
AAACGAGCTAGCTCGTGTGTGTGTATGTTTTGTTAGCGTCTACCTCGCTA
ACCGGTTGACCCAAAAAACAGAAATCAGTCTCAGTACAGTTGAAAACTAG
AAATTCTTCTAAATGTCATTATCTGGCCCCCTGTGAGTCGGTGTCATAGT
GTGTGTGAGTCCTTATTTCCATCGACCGCGCAAACCGGCTGTGTGAGTGC
ATTTGTGTCTAAATGGTTAACGTCGACCGCGCTCACTGGCCGACGAATGA
AACAAGCGGCATAAAAAATGCCCGAAGACGCTTTTAAGTTATGTGTGTGT
GTGGTTTTTCTTGTAGAATCGACAGCGCTAGCCGGCTGACCAATGTGTGA
TTGTGTTTGTCTTTTCGTTAGCATCGACCGCACTAGCCGGCTGACCGATG
ACGAGAAGATAGTCACAGTGCGGCGTGTGTATGTGTGTCCGTGATTTTGA
GGTCGTCCGTCCTTTGTTCCCCACTCATGACCCAAGCCGAACGCATCTTC
TCCCCGGCTTTTTTTGCGAAGATGCCCAAAAGGCGGGTCTATTGGTAGGC
CTAAGGCCTTGGTGAAATACGAGCCTCGGACGACCACCTCCAATTCCCTC
CTCGTCGTCGATCACTCCGGCTGGTCCTCTTCCTGTTTCACCAGACATTG
TAGCCTATAGGAGTCGGCCCATCATCTCTACTCCATGATACCATAGACAA
CGACAAAAAACATATTTTCTCAACCACCCAACGCCCCCCCCCCCACCCCC
ATAGGCTGAGCTGATAAGCCGGGCCAAGGGCATGTACGCGGCCCTCGATC
TTAGGCTCGGAAACAGCAAGGAGGCATTCTTCTTCGGATCGAGACCTACT
TCCCTCGATGCCGTGGTTTTCGGGCACCTTGCTGAGGCGTGGACGATAGC
GGCGCTGCTGGACCTGCTTCCCGCCTTCGACAACTTGTCTCGGTGACATA
CTAGCCCCTCCTGTGTCTTGCTTCTCTTTGTGCGTGTGCGTTTTTTTCTT
GTGGCCATCGACCGCGCTTACCGGTCAGCTATTGGAATACGGTCAATCTT
CGAAGGGGATAGCAACCCCGACACGCATTCTTCTCAAAGTGTCCTGTGTG
TGTGTCTTGACTGATGGCATCGACCATGCTATCCGGCTGACCATAGAAAA
GAAGTCAAGTGCTGCTGAAAACAGAAAATGCCTCCAGAGGCCATGGTCTG
GCCCCCTATGTGTGTCTATAAATCTATCAGGCTGGTGCCAGCGTACGCAA
CATTTGGTGCGGTACATGCTTGACGCATCAGCCGGGGTCAGACGGGAGCC
GCTTTTAAAATAATTTCCTCATATTTCTCACATGCCCCACCTTCTTCGTA
CAAATTGTTGCCTTAGTTTCGTCGCGATTCTCGACCAATGTGTGTTCTCC
GCAATCGTGCATCGTATGTTTCCTCTGAAGCATATTGCCATTCAACGATT
ACAATTTTCGCCTCGTACTGGTGCCGACCGACGTGATGCCCTGTGTTATT
GCTGCCGAGCGCTTCCTCAGTGTGCTTTTGGTGCACAGCATCGTGTGCCT
GCTGCTGACGTCCATGTCTGTGCGGGTGGTTCGAATCATTCCTTTTCATT
ATTTTCCTTGAAATGCGCTGCGCAGCCTTTTCCGACGAGTGTGTGACGAC
TACTTTCGGCCGGGATCGTTCCCGCCTCCATCGTCCGGCGGCGAGGGAGT
TGGAGAGGGCAAGAATAGCGGCGAAGAAAGGAGTGGTGATGGCCTGGGTG
GGAGCGGTGGCAGCGAGGACCGACTGAGGGACGCCATGCTGAGAGCGGAC
TACGTGAACTCCCTTAACGCTTTTAACCAGCTTGCGGTGAGACCGATGGC
GTCATTGGAGAGTCGCAGCGCCTGGGAAAGACGGCAGCGCGGTCGAGAAG
TTGACACATGATCGATTGTTTTGAAAAGTGGCTGAGAGAATGTCGACAAA
TCAGCTGGCAGATGCTGAGCATTGGTCGTATGAAAACGATCCATCGCATG
AGTGAAAGTTGCTTCGTGGTCATCGAGTTTTCGTTTGCAGCTTTTTTTTT
GTCCGACATTCGCTGCAATGTGACATGTGCGGCAAGGAACAACCGTCGTG
ATTCACTCACCCAGCAGCCGATCTTTGTTCCCTTCAGGTTCAGGTTGTCG
ATCAAGGCAGTGAATGTGAACAAAGCACGGCGTCTGCCGGCCGGTGGTTC
TTGCCGCTTGTACTATCCGATCCCCCTTTGCCCTGTTGCGCATTCTCTTT
GACTTCGCCCGTCCCTTTTCGATCCCGCAGGGGTGTGCTCTGTGCTCCGA
AGTCCCCTACATCGAGGATCCCTATCCCCCAAGACCGATCGCCAACGCCG
GTATACCGCCACCAGGTGAACCTGTTAACCGATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8255:368..6702-

>mRNA_Ecto-sp13_S_contig8255.19604.1 ID=mRNA_Ecto-sp13_S_contig8255.19604.1|Name=mRNA_Ecto-sp13_S_contig8255.19604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8255:368..6702- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGAGCAACGGGGACAGCAGTCAGCAGTCCATCCGACGTACGCCGAAAAT
CAACCCTACGCGGGTGATGGGGTCTGAAGAACACGGTGACGCTGTCCCGG
TTAGGACATCGTGGAACCCCCTGCGTGCCTTACGTTCGTGGGGGAGGATT
GAAGAGCAACCAGACTTGGAACAGCCTGGGCCCGTGATCGCTCATGGGAG
TGCTTTGGACGTGATGGTGGTGACACAGTTTCGCCCCGCTTGGGAGATTC
AAGCACACCTCCGCTTCGTCCGCTTGCCCTACAGAGTCGAGAACAGCAGC
TACATGGGGTCGGCGGCGACGGGCCTTTACCCGGTCCTCACGGACGGCCA
GTTCGTCCTCCGCTCCGAGGACGCGGCCGGCCACATCGCCAGCAGGCGCA
GGGACGTGGACGTCGGCCTCACGGAAGCGGAGAAGGCGGAGGCGCAGGCG
TTAGCCATGCTGGTGAGGGAGGGGCTCATGCCGCTCCTTCGGGTGATGCG
CTACAGGGGGGACGAGGGCGAAGTCCGGCAAACGGTCCATCCCCCGATGA
AGAAGGCGTTGTCCTGGCCGCTGTCGTGGTGGTCGCCTGGCGCGGAGGGC
AGGCGGAGCAAGCGGGAGTCTGCGGTTCGCGGCCTCGACCGGCTGAGCAA
GGCTGAGCTGATAAGCCGGGCCAAGGGCATGTACGCGGCCCTCGATCTTA
GGCTCGGAAACAGCAAGGAGGCATTCTTCTTCGGATCGAGACCTACTTCC
CTCGATGCCGTGGTTTTCGGGCACCTTGCTGAGGCGTGGACGATAGCGGC
GCTGCTGGACCTGCTTCCCGCCTTCGACAACTTGTCTCGCCTTTTCCGAC
GAGTGTGTGACGACTACTTTCGGCCGGGATCGTTCCCGCCTCCATCGTCC
GGCGGCGAGGGAGTTGGAGAGGGCAAGAATAGCGGCGAAGAAAGGAGTGG
TGATGGCCTGGGTGGGAGCGGTGGCAGCGAGGACCGACTGAGGGACGCCA
TGCTGAGAGCGGACTACGTGAACTCCCTTAACGCTTTTAACCAGCTTGCG
GGGTGTGCTCTGTGCTCCGAAGTCCCCTACATCGAGGATCCCTATCCCCC
AAGACCGATCGCCAACGCCGGTATACCGCCACCAGGTGAACCTGTTAACC
GATAG
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