mRNA_Ecto-sp13_S_contig8252.19601.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8252.19601.1
Unique NamemRNA_Ecto-sp13_S_contig8252.19601.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: D8LQD8_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQD8_ECTSI)

HSP 1 Score: 524 bits (1349), Expect = 5.360e-180
Identity = 345/405 (85.19%), Postives = 350/405 (86.42%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERGVSSNGGVTSSGELGSGVXXXXXXXXXXXXXXXXXXXXXNSTGEPASKKKRNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGCEEGNGEIGTASSIAAT 1215
            DKSSCFSAEALLGQEACAAAGATR A  EWRGGDVIDACAAPGNKTMHAASLLHE+ASXXXXXXXXXXXXXSAGAGKV DRS+TGKRAKVFAFDKDLRRLALMRRRVDDSGASAG AIETRLQDFLEVDPADRRYSK VTAILLDPSCSGSGIVSAPDRLHENQGD DEGEGA  GD EEG+SRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHA ENEDVVAKAL QQPTP PLT     XXXX  SS+RFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERGVSSNGGVTSSGELGSGV        XXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXX          AAEGCEEGNGEIG A+SI AT
Sbjct:  216 DKSSCFSAEALLGQEACAAAGATRDARAEWRGGDVIDACAAPGNKTMHAASLLHERASXXXXXXXXXXXXXSAGAGKVADRSNTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGGAIETRLQDFLEVDPADRRYSK-VTAILLDPSCSGSGIVSAPDRLHENQGDADEGEGAPGGDREEGRSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAVENEDVVAKALDQQPTPSPLTTASTAXXXXAASSERFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERGVSSNGGVTSSGELGSGVSPGSCSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEEAEQKEGAAEGCEEGNGEIGAATSIGAT 619          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A836CJW7_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 6.700e-57
Identity = 166/311 (53.38%), Postives = 188/311 (60.45%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWR-GGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKR-FELSRCLSRWPRRGLAV--SGLSKAQAACLARTDPFEDETNGFFVAVFERGVSSNG 921
            DKSSCFSA+ALLG             G+ W  GGDVIDACAAPGNKT+HAA+       XXXXXXXXXXXX                   VFAFD+D +RLAL+RRR D  GA     I   LQDFL VD  D R+S+ V  ILLDPSCSGSGIV+APDR  E     +E  GA  GD      RV +LAAFQL  LLKA+SFP  +RV YSTCSVHA ENE VVA AL QQ       XXXXXXXX        + L +CL RW RRG+    SGL+  QA C+ R  P  D+TNGFFVA+F RG +  G
Sbjct:  201 DKSSCFSAQALLG------------GGSSWLDGGDVIDACAAPGNKTLHAAAXXXXXXXXXXXXXXXXXXXHH-----------------VFAFDRDAKRLALLRRRCD--GAGGAGRITPCLQDFLAVDVNDARFSR-VRGILLDPSCSGSGIVTAPDRWQE-----EEQGGAGGGD------RVDKLAAFQLAALLKALSFPHARRVVYSTCSVHARENEGVVAAALRQQXXXXXXXXXXXXXXXEERCCPGPWRLVKCLPRWHRRGIVPEGSGLTAQQADCMVRAAP-ADDTNGFFVALFARGPADEG 467          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A5D6Y5J7_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5J7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.390e-51
Identity = 136/316 (43.04%), Postives = 167/316 (52.85%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVGDGE-EGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERG---VSSNGGVTSS 936
            DK+SCF A  L G+ + A        G E   GDVIDACAAPGNKT H A LLH+Q                             K  KVFAFD+  +RL L++RR+   GA     +E  LQ FL+++  D +Y+  V +ILLDPSCSGSG+ +  D L +     DE     V D E E  +RV  LA FQL+ L KA SFPQVQRV YSTCS+  +ENE+VV  AL  +P                   + F L  CL  W RRG+ + GLS  QA  L R D  ED TNGFFVA FERG   V ++G  TS+
Sbjct:  195 DKASCFPAYILHGEHSDAP-------GME---GDVIDACAAPGNKTCHVAMLLHQQGERY-------------------------KNCKVFAFDRSPKRLELLKRRMKIVGAEH--LVEPCLQSFLDINVHDHKYAN-VRSILLDPSCSGSGMTNRLDHLLDIASGYDEALENDVEDAEGEMTARVQSLADFQLEALTKAFSFPQVQRVTYSTCSIFQKENEEVVRAALDSEPN--------------RRDPRPFVLQPCLQTWARRGMQIDGLSADQAKALVRADGLEDSTNGFFVAYFERGTTPVVAHGASTST 458          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: K3WX53_GLOUD (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX53_GLOUD)

HSP 1 Score: 186 bits (472), Expect = 5.070e-50
Identity = 131/303 (43.23%), Postives = 161/303 (53.14%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVGDGEEGK--SRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCF A  L G+        T   G E   GDVIDACAAPGNKT H A LLH+Q                    K  D        KVFAFD+  +RL L++RR+   GA     +E  LQ FLE+D    +Y+  V +ILLDPSCSGSG+ +  D L +     DE     V +  EG+  +RV  LA FQL+ LLKA SFPQVQR+ YSTCS+  +ENE+VV  AL+ +                    + F L  CL  WPRRG+ + GLS  QA  L R +  ED TNGFFVA FER
Sbjct:  194 DKASCFPAYILHGEH-------TDADGQE---GDVIDACAAPGNKTCHVAMLLHQQPE------------------KYKD-------CKVFAFDRSPKRLELLKRRMKIVGADG--IVEPCLQSFLEIDVDAEKYAN-VRSILLDPSCSGSGMTNRLDHLLDIASGHDEALENDVEEDVEGEMTARVQSLADFQLEALLKAFSFPQVQRITYSTCSIFQKENEEVVIAALNSEAN--------------KNDPRPFVLRPCLQTWPRRGMEIDGLSADQAKALVRANGLEDSTNGFFVAYFER 444          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A1V9ZRI8_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRI8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.970e-49
Identity = 133/305 (43.61%), Postives = 164/305 (53.77%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHE----NQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCFSA  L G+         RG+      GDVIDACAAPGNKT HAA L                         V  ++ST +  KVFAFD+   RL L++RR+   GA A   +E  LQ FL+VD  D +Y+  VT+ILLDPSCSGSG+ +  D L E     QG  DE E +   D  + ++R+  LA FQL+ L KA SFP VQRV YSTCS+  +ENE+VV  AL                     +   F L + L  WPRRG+ + GLS  QA CL R +  ED TNGFFVA FER
Sbjct:  221 DKASCFSAFVLQGE---------RGSDDL---GDVIDACAAPGNKTSHAAML-------------------------VARKTST-RPIKVFAFDRSATRLDLLKRRM--KGAGADGVVEACLQSFLDVDVHDPKYAH-VTSILLDPSCSGSGMSNRLDHLLELASMKQGFEDEYEAS---DASDVQARLQSLADFQLEALRKAFSFPHVQRVAYSTCSIFEKENEEVVVAALRASEA----------------AQTPFHLVKALPTWPRRGVVIPGLSHDQADCLVRANGLEDGTNGFFVAYFER 465          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A225UJD1_9STRA (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJD1_9STRA)

HSP 1 Score: 180 bits (457), Expect = 7.640e-49
Identity = 133/318 (41.82%), Postives = 174/318 (54.72%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDE----GEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFERGVSSNGGVTSSGE 942
            DK+SCF A  L G+ A A          + + GDVIDACAAPGNKT H A LL +Q                 G G   +  +T KR +VFAFD+  +RL L++RR+  +GA+A   ++ +LQ FLEV P D    + V +ILLDPSCSGSG+ +  D L +     D      +GA     E+   R+  LA FQL+ L KA SFPQV+RV YSTCS+  +E+E+VVA AL  +                  +S+ F L   L+ WPRRGL V+GLS  QA  L R +  ED TNGFFVA FER   ++G +    E
Sbjct:   90 DKASCFPAFVLHGEHADA----------KDKQGDVIDACAAPGNKTSHLAMLLQQQ----------------DGDG---EDDATPKR-RVFAFDRSPKRLELLKRRMQLAGAAA--RVQAQLQSFLEV-PVDDEIYRNVRSILLDPSCSGSGMTNRLDHLLDIASSRDTVLEPDQGAEYE--EDTAKRLQSLADFQLEALRKAFSFPQVERVVYSTCSIFQKEDEEVVAAALKSKEN--------------VGASRPFVLKPALTSWPRRGLEVAGLSADQAKALVRANGLEDSTNGFFVAYFERTDRADGALVEVNE 358          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A2D4CCB2_PYTIN (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCB2_PYTIN)

HSP 1 Score: 180 bits (457), Expect = 2.130e-48
Identity = 136/302 (45.03%), Postives = 167/302 (55.30%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVG-DGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCF A  L G+ +  A             GDVIDACAAPGNKT H A LL +   XXXXXXXXX                     KVFAFD+  +RL L+RRR+   GA     + T LQ FL+VD  D +Y+  V ++LLDPSCSGSG+ +  D L +     D+ + A    +  +  SR+  LA FQL+ LLKA SFPQV+RV YSTCS+ ++ENE+VVA AL                     + + F L  CL  WPRRGL V+GLS  QA  L R D  ED TNGFFVA FER
Sbjct:  197 DKASCFPAYVLHGERSDPAHAR----------GDVIDACAAPGNKTSHVAMLLQQXXXXXXXXXXXX----------XXXXXXXXDARKVFAFDRSSKRLELLRRRMRLVGADR--LVXTCLQSFLDVDVXDAKYAN-VRSVLLDPSCSGSGMTNRLDHLLDIASSQDKQDDAENEYEDSDVASRLQSLADFQLEALLKAFSFPQVERVVYSTCSIFSKENEEVVAAALSSAQN--------------QAAERPFALRPCLETWPRRGLEVAGLSAEQAKALVRADGHEDATNGFFVAYFER 461          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A662XRE0_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRE0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.320e-48
Identity = 130/305 (42.62%), Postives = 165/305 (54.10%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDE----GEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCF A  L G+ A A            + GDVIDACAAPGNKT H A LL +Q                     V D  +  +R +VFAFD+  +RL L++RR++ +GAS    ++  LQ FLEV P D    + V +ILLDPSCSGSG+ +  D L +     D+      GA     E+   R+  LA FQL+ L KA SFPQV+RV YSTCS+  +E+EDVVA AL  +                  +++ F L  CL  WPRRGL V+GLS  QA  L R +  ED TNGFFVA FER
Sbjct:  219 DKASCFPAFVLHGEHADAVE----------KQGDVIDACAAPGNKTSHVAMLLQQQDG-------------------VEDIHAATQR-RVFAFDRSAKRLDLLKRRMELAGAST--RVQAELQSFLEV-PVDGEMYRNVRSILLDPSCSGSGMTNRLDHLLDIASARDKILEPDAGAEYE--EDVAKRLQSLADFQLEALRKAFSFPQVERVVYSTCSIFQKEDEDVVAAALKSEEN--------------VRAARPFVLKPCLRSWPRRGLEVAGLSAEQAKALVRANGLEDSTNGFFVAYFER 474          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A8K1FE13_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE13_PYTOL)

HSP 1 Score: 180 bits (457), Expect = 4.810e-48
Identity = 124/302 (41.06%), Postives = 161/302 (53.31%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHENQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKR-FELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCFSA  L G+ +              R GDVIDACAAPGNKT HAA L+ ++                                +VFAFD+  +RL L++RR+  +GA     +E   Q FL+V   D +Y+  V +ILLDPSCSGSG+ +  D L +     D+ + A     E+  SR+  LA FQL+ LLKA SFPQV+RV YSTCS+  +ENE+VV  AL  +                  S+KR F L +CL  W RRG+ + GL++ QA  L R D  ED TNGFFVA FER
Sbjct:  195 DKASCFSAFVLHGERS----------DKPGRAGDVIDACAAPGNKTSHAAMLIRQKPEIYEG-------------------------CRVFAFDRSAKRLDLLKRRMKLAGADE--VVEPCCQSFLDVKVDDPKYAN-VRSILLDPSCSGSGMTNRLDHLLDIASSQDQLDTAENEYEEDVASRLQSLADFQLEALLKAFSFPQVERVAYSTCSIFQKENEEVVVNALQSKQN---------------RSAKRPFVLLKCLPTWHRRGMVIPGLNEEQAQSLVRADGHEDSTNGFFVAYFER 443          
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Match: A0A3R7HLE0_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HLE0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.140e-47
Identity = 127/305 (41.64%), Postives = 164/305 (53.77%), Query Frame = 1
Query:    1 DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAASLLHEQASXXXXXXXXXXXXXSAGAGKVTDRSSTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSGSGIVSAPDRLHE----NQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAMSFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTXXXXXXXXXXXSSKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFER 903
            DK+SCF A  L G+ A AA           + GDVIDACAAPGNKT H A LL +Q                      TD         VFAFD+  +RL L++RR++ +GA+    ++ +LQ FLEV P D    + V +ILLDPSCSGSG+ +  D L +        ++   GA     E+   R+  LA FQL+ L KA SFPQV+RV YSTCS+  +E+E+VVA AL  +                  +S+ F L  CL+ WPRRGL V+GLS  QA  L R +  ED TNGFFVA FE+
Sbjct:  198 DKASCFPAFVLQGEHADAAG----------KRGDVIDACAAPGNKTSHLAMLLQQQ--------------------NDTDDGDDTPIHHVFAFDRSPKRLELLKRRMELAGAAE--RVQAQLQSFLEV-PVDGDLYRNVRSILLDPSCSGSGMTNRLDHLLDIASARDTVLEPDAGAEYE--EDTAKRLQSLADFQLEALRKAFSFPQVERVVYSTCSIFQKEDEEVVAAALASEEN--------------TRASRPFVLKPCLTTWPRRGLEVAGLSAEQAKALVRANGLEDSTNGFFVAYFEQ 453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8252.19601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQD8_ECTSI5.360e-18085.19SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=... [more]
A0A836CJW7_9STRA6.700e-5753.38S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A5D6Y5J7_9STRA1.390e-5143.04SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
K3WX53_GLOUD5.070e-5043.23SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A1V9ZRI8_9STRA1.970e-4943.61SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A225UJD1_9STRA7.640e-4941.82SAM_MT_RSMB_NOP domain-containing protein (Fragmen... [more]
A0A2D4CCB2_PYTIN2.130e-4845.03SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A662XRE0_9STRA2.320e-4842.62SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=... [more]
A0A8K1FE13_PYTOL4.810e-4841.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7HLE0_9STRA1.140e-4741.64SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8252contigEcto-sp13_S_contig8252:448..2700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score526.6
Seed ortholog evalue1.1e-146
Seed eggNOG ortholog2880.D8LQD8
Model size1224
KEGG koko:K15264
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.rRNA base methylation
EggNOG OGsCOG0144@1,KOG2360@2759
EC2.1.1.311
Cds size1224
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464095.1234279-CDS-Ecto-sp13_S_contig8252:447..6891681464095.1234279-CDS-Ecto-sp13_S_contig8252:447..689Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8252 448..689 +
1681464095.136198-CDS-Ecto-sp13_S_contig8252:1008..11771681464095.136198-CDS-Ecto-sp13_S_contig8252:1008..1177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8252 1009..1177 +
1681464095.1465378-CDS-Ecto-sp13_S_contig8252:1484..16851681464095.1465378-CDS-Ecto-sp13_S_contig8252:1484..1685Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8252 1485..1685 +
1681464095.1570392-CDS-Ecto-sp13_S_contig8252:2088..27001681464095.1570392-CDS-Ecto-sp13_S_contig8252:2088..2700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8252 2089..2700 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8252.19601.1prot_Ecto-sp13_S_contig8252.19601.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8252 448..2700 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8252.19601.1

>prot_Ecto-sp13_S_contig8252.19601.1 ID=prot_Ecto-sp13_S_contig8252.19601.1|Name=mRNA_Ecto-sp13_S_contig8252.19601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=408bp
DKSSCFSAEALLGQEACAAAGATRGAGTEWRGGDVIDACAAPGNKTMHAA
SLLHEQASAAAAASAALSGGGSAGAGKVTDRSSTGKRAKVFAFDKDLRRL
ALMRRRVDDSGASAGAAIETRLQDFLEVDPADRRYSKKVTAILLDPSCSG
SGIVSAPDRLHENQGDVDEGEGARVGDGEEGKSRVARLAAFQLQGLLKAM
SFPQVQRVCYSTCSVHAEENEDVVAKALHQQPTPPPLTPATTASASAAAS
SKRFELSRCLSRWPRRGLAVSGLSKAQAACLARTDPFEDETNGFFVAVFE
RGVSSNGGVTSSGELGSGVSSGSCSGNGGGGGDGGAGVDGNSTGEPASKK
KRNRHKNRKKNKKKRKLAEAEGNAQSEEAEQKEGAAEGCEEGNGEIGTAS
SIAATKA*
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mRNA from alignment at Ecto-sp13_S_contig8252:448..2700+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8252.19601.1 ID=mRNA_Ecto-sp13_S_contig8252.19601.1|Name=mRNA_Ecto-sp13_S_contig8252.19601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2253bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8252:448..2700+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACAAGAGCTCCTGCTTCTCGGCCGAGGCTCTCCTGGGGCAAGAGGCGTG CGCAGCCGCCGGCGCTACCCGGGGTGCGGGGACGGAATGGAGAGGCGGGG ACGTGATCGACGCTTGCGCCGCCCCGGGGAACAAGACAATGCACGCGGCG TCCCTGCTCCACGAGCAGGCGAGTGCAGCAGCAGCTGCCTCGGCTGCTTT GTCTGGGGGGGGGTCGGCGGGTGCGGGGAAAGTGACCGACAGGTTCGTTG ATTTGGGTGTGGGCCGGTGTCTAATCAGGGGCGATGCGGACGGAGTTGTG CCGATGGTGCAGAGCCTCGTGTTGCACGCCCGCGTGGCCACTTATTCGCC TGCCCCGGGCGATGGTAATCTTGCCGGGGTCCATTCCGAGGAGCCGAGGT TGATCTACACCGGCCATGCGGTATAGCGTTACGTAAAAGTGTCGAGAAAG TACGAGTAGTCTACACTCCTCCTCCCCCCCGGTGCCCAAGGGCATCTCGC CGGACGACGCTAACTCGTTCCTCCTCGATGCATGAACGGGCGGGGTCCGC TTCGAATCCAGGTCGAGCACTGGCAAGCGGGCGAAGGTCTTCGCGTTCGA CAAGGACCTGCGTCGGCTGGCCCTCATGCGGCGAAGGGTGGACGATTCGG GCGCCTCGGCGGGAGCAGCCATCGAGACACGCCTGCAGGACTTTCTCGAG GTTGATCCCGCGGATAGAAGATACTCGAAGGTCGGTCGGGGCAGCAGGCG GTGCCTCAACCAAGCAATGAGAGAGCCGGATTGACGATGTACCCTGTTTT CGGAATCAGACGGGTGTACCCTAGGATAGCCACTTTCTTCTCGTTGGAAC TCTCCTCTTTCCATTTCCCCCGTGTACCTTGTCTCTGTCTAACACACGAT AAGCTCCGGGTTATTGGGCAACGGGTTTGCTCTGCTGGACGCCCCCGCCT CGAATCTATCGCTCGTTCGAAAACCGCCTTGTCAAATCGTCTGACGTCTC GCCAAATTTCTGCTCTGCATAAATATTTCCGATGGAGAAGGTCACGGCCA TCCTGCTGGATCCGTCTTGCTCCGGTTCGGGCATCGTTTCTGCCCCGGAC CGTCTCCACGAGAATCAAGGCGACGTGGATGAGGGCGAAGGGGCCCGGGT GGGTGACGGGGAGGAGGGAAAGTCGCGCGTGGCGAGACTGGCGGCGTTTC AGCTACAGGGGCTCCTTAAGGCCATGTCCTTCCCGCAGGTAGGTGTTTAG TGCGTGGGTGCGTGCGCACGTCGGCGTCTTGTGTGTGTCTAGCATCGATC GCCCTAGCCGACTGACCAACGAAATTACATTTGAGGGGACTGCGTGTGTG AACTGCGCTTCCGTTGCGGTGTGTCTCTTTTGTGGCGGTTCAGCCGTTGT CGTGTGTGACACTCGCTCTCTCTGCCCCCTCTCCCTGTCTATCTGTCTGT CGATCTGCCGGCGTGTCGCACAACCGCTACCCTCCGCCCTCCCGTGCGTC TGGCGCATGGGCGCCTTTCTTACCGTGAAATACGACGCGTGTTTTGAACC AATCCCACCGACAGTAACAACAGCAACAAAAACAATGAACAAATTGCCTC GTCGTGTGCCGTGCCCTCCTTTTCCGCCTGTGCATGTACAGGTGCAGCGC GTGTGCTACTCGACGTGCTCCGTGCACGCCGAAGAGAACGAAGACGTCGT CGCCAAGGCCTTGCACCAGCAGCCCACACCTCCCCCCCTCACCCCCGCCA CCACCGCTTCTGCCTCTGCTGCTGCTTCCTCCAAGCGATTCGAGCTCTCT CGCTGCCTGTCCCGGTGGCCGAGGAGAGGGCTGGCGGTCTCCGGGTTAAG CAAGGCCCAGGCGGCGTGCCTTGCGAGGACAGACCCTTTCGAGGACGAGA CGAACGGGTTTTTCGTGGCCGTTTTCGAGCGGGGGGTTAGCAGCAACGGC GGCGTCACTAGCAGCGGTGAATTGGGTAGTGGCGTTTCATCTGGGAGTTG TAGTGGTAATGGTGGCGGGGGCGGTGATGGTGGAGCGGGGGTAGATGGCA ACTCCACCGGAGAACCAGCATCGAAGAAGAAGCGGAACCGTCACAAGAAC CGGAAGAAGAATAAAAAGAAGCGGAAGCTAGCGGAGGCAGAAGGGAACGC ACAGTCGGAGGAGGCAGAGCAAAAAGAAGGCGCAGCTGAAGGTTGTGAAG AAGGGAATGGGGAGATAGGGACAGCCTCCTCGATAGCGGCGACCAAGGCA TGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8252:448..2700+

>mRNA_Ecto-sp13_S_contig8252.19601.1 ID=mRNA_Ecto-sp13_S_contig8252.19601.1|Name=mRNA_Ecto-sp13_S_contig8252.19601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8252:448..2700+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACAAGAGCTCCTGCTTCTCGGCCGAGGCTCTCCTGGGGCAAGAGGCGTG
CGCAGCCGCCGGCGCTACCCGGGGTGCGGGGACGGAATGGAGAGGCGGGG
ACGTGATCGACGCTTGCGCCGCCCCGGGGAACAAGACAATGCACGCGGCG
TCCCTGCTCCACGAGCAGGCGAGTGCAGCAGCAGCTGCCTCGGCTGCTTT
GTCTGGGGGGGGGTCGGCGGGTGCGGGGAAAGTGACCGACAGGTCGAGCA
CTGGCAAGCGGGCGAAGGTCTTCGCGTTCGACAAGGACCTGCGTCGGCTG
GCCCTCATGCGGCGAAGGGTGGACGATTCGGGCGCCTCGGCGGGAGCAGC
CATCGAGACACGCCTGCAGGACTTTCTCGAGGTTGATCCCGCGGATAGAA
GATACTCGAAGAAGGTCACGGCCATCCTGCTGGATCCGTCTTGCTCCGGT
TCGGGCATCGTTTCTGCCCCGGACCGTCTCCACGAGAATCAAGGCGACGT
GGATGAGGGCGAAGGGGCCCGGGTGGGTGACGGGGAGGAGGGAAAGTCGC
GCGTGGCGAGACTGGCGGCGTTTCAGCTACAGGGGCTCCTTAAGGCCATG
TCCTTCCCGCAGGTGCAGCGCGTGTGCTACTCGACGTGCTCCGTGCACGC
CGAAGAGAACGAAGACGTCGTCGCCAAGGCCTTGCACCAGCAGCCCACAC
CTCCCCCCCTCACCCCCGCCACCACCGCTTCTGCCTCTGCTGCTGCTTCC
TCCAAGCGATTCGAGCTCTCTCGCTGCCTGTCCCGGTGGCCGAGGAGAGG
GCTGGCGGTCTCCGGGTTAAGCAAGGCCCAGGCGGCGTGCCTTGCGAGGA
CAGACCCTTTCGAGGACGAGACGAACGGGTTTTTCGTGGCCGTTTTCGAG
CGGGGGGTTAGCAGCAACGGCGGCGTCACTAGCAGCGGTGAATTGGGTAG
TGGCGTTTCATCTGGGAGTTGTAGTGGTAATGGTGGCGGGGGCGGTGATG
GTGGAGCGGGGGTAGATGGCAACTCCACCGGAGAACCAGCATCGAAGAAG
AAGCGGAACCGTCACAAGAACCGGAAGAAGAATAAAAAGAAGCGGAAGCT
AGCGGAGGCAGAAGGGAACGCACAGTCGGAGGAGGCAGAGCAAAAAGAAG
GCGCAGCTGAAGGTTGTGAAGAAGGGAATGGGGAGATAGGGACAGCCTCC
TCGATAGCGGCGACCAAGGCATGA
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